RLG00000011968

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0016399
Physical Location & Seq
Forward (+)
14162639 .. 14165847
3209 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011968

Sequence Viewer

Length: 1731 bp
ATGTCAAATATTACAGGTGATATTGAAGAAGGTAGCTTCTCCTCTGGGAACACAGCCGGGGAAGAAGTTCATCAAGAAAAGCAGCTGCAAAACCACTTGCATGGCTCCAACTCCGGTGGAGGTTCCGGCGGGGGGAGGAGTAACAGCAATGGTTCTGTCACTACCCAACAGCAACAGCAGCAGCCAACTAAGAAGAAGAGGAACCTTCCCGGAACTCCAGATCCGAGTGCAGAAGTTATTGCTCTATCACCAACGACTCTAATGGCGACGAACCGATTTGTGTGTGAGATCTGCAACAAAGGGTTTCAGAGAGACCAGAACCTTCAGCTTCACAGGCGAGGCCATAACCTTCCATGGAAGTTGAGGCAAAGAACCAGCACGGAGGTTAGGAAAAGGGTTTACATATGCCCTGAGCCAACCTGCGTCCACCACAACCCGGCTCGTGCTTTAGGAGATCTTACTGGCATTAAAAAGCACTTTAGCCGAAAACACGGTGAGAAAAAGTGGAAATGTGACAAGTGCTCCAAGAAATATGCAGTGCAGTCAGATTGGAAGGCTCATCAGAAGACTTGCGGGACTAGGGAATACAAATGTGATTGTGGAACCATCTTTTCCAGGAGAGATAGCTTTATCACCCACAGAGCCTTCTGTGACGCATTGGCAGAAGAAAACAACAAAGTAAACCACGGACTCATAATGAACAACAACATGGGGACCCATAACCAAATGCCTGATCATCTCATCTCCTCCATGCCGATGAACACCAACACCTCAATGGGAATCGGAGCGGGAGCAATCACGGAATACAACAACTACGACCCAAAAAACCCTATGAAATCCCTCCCGGAGGACCTTGTCCCAATGCCTTTCAAGTCCATCATGAACACCAATCTCCCAGCCGGAGGAGGAATGTTTTCCAGCAGCTCCGGCTCTCTTTTCGGCGGCCCTAGAAGCGTCAACTCCTCCACCTCCTCTAGCCTCCAGCTCAGCTCCAACAACAGTTCCTCTGCCGGGTTCAACTACCTTCAAGACAGCAAAAACGGCTGCGGTGGAAGCCCTAATATAACTGGTTCGGCTCAAATGTCAGCCACTGCTTTGCTCCAGAAGGCAGCTCAAATGGGCGCCACCGCCAGCAACACTACTATAAACTCCCCCATGATGCAGAAGAGCTTCGTCACCAGCATGGCTGGCCCGGAGAACCACCACCTTCTCTCCACCAACTCAATCAGCAACGTCACTCGACCGCCGTACGATCACCACCCTCACTTCCAGCAAGTCCAACAACAGCTGCCAGATCACCACCAGATGGTTGGGATTCACGGCTTCACCAACCAGCTCTTCGGTGACGCAAACGCAACTTCAGCTGCCAGCTCGGCGGCGATGAGTGACCACATGGGGATGTTCAGTCAGGTGGTGTTTAACATGGGGAGTGGAGGCAGTCACGAGCAGAACCAGGCGTTGCTGAGGAGCTTGGAGCAGCAGAGATTTGGAGGGAGCGGCGGCGAAGGAGGCGATATGACTACGCTTGATCTCTTGGGCCTCGGCGGAGGAGGAGGAGCGAGGCCTCAGCAGCAGAATTTGCATGAGCAACATCAGCAGAGGTTGGACTTGGAAGCGATGAGCCAGCCGAGAATGCCAATGATGAACCCCTTCCACCAGCAACAGCAGCGCTCGCACGGCGACTCACCGGTGGAAAGCAACCCGTTTGGAAGATCGGCTACGGAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2

Protein Analysis

577

Amino Acids

62.58

Weight (kDa)

8.78

Isoelectric Point (pI)

55.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 130 - 164 6.7e-23 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 168 - 192 8.2e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 195 - 234 1.4e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016399)

Species Orthologous Gene IDs
fragaria_vesca FvH4_c6g00070 FvH4_c6g00070
malus_domestica MD03G1283900.v1.1 MD11G1302300.v1.1
prunus_persica Prupe.8G255800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0293211
rosa_laevigata RLG00000011968
rosa_multiflora Rmu_ssc0000162.1_g000019
rosa_roxburghii Rroxscaffold_7G00174350
rosa_rugosa Rorug06G0233400
rosa_samantha Rh6AG346100 Rh6BG353700 Rh6CG360100 Rh6DG346500
rosa_wichuraiana Rw6G030150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 428
AccB1I GGYRCC 1 cut(s) 1121
AccB7I CCANNNNNTGG 1 cut(s) 1306
AccBSI CCGCTC 2 cut(s) 788, 1497
AclWI GGATC 1 cut(s) 215
AcsI RAATTY 1 cut(s) 1576
AcuI CTGAAG 2 cut(s) 308, 1344
AcyI GRCGYC 1 cut(s) 1122
AfaI GTAC 2 cut(s) 1250, 1727
AfeI AGCGCT 1 cut(s) 1670
AfiI CCNNNNNNNGG 6 cut(s) 132, 436, 847, 902, 1011, 1306
AgeI ACCGGT 1 cut(s) 1687
AgsI TTSAA 4 cut(s) 26, 871, 1018, 1028
AjnI CCWGG 2 cut(s) 614, 1452
AjuI GAANNNNNNNTTGG 2 cut(s) 1322, 1354
AloI GAACNNNNNNTCC 2 cut(s) 205, 237
Alw21I GWGCWC 1 cut(s) 524
Alw26I GTCTC 1 cut(s) 306
AlwI GGATC 1 cut(s) 215
AlwNI CAGNNNCTG 1 cut(s) 1091
Aor51HI AGCGCT 1 cut(s) 1670
AoxI GGCC 5 cut(s) 340, 943, 1189, 1537, 1562
ApoI RAATTY 1 cut(s) 1576
AsiGI ACCGGT 1 cut(s) 1687
Asp700I GAANNNNTTC 4 cut(s) 66, 913, 1169, 1649
AspLEI GCGC 2 cut(s) 1124, 1671
AspS9I GGNCC 5 cut(s) 714, 850, 944, 1190, 1537
AsuC2I CCSGG 6 cut(s) 58, 210, 437, 845, 1012, 1193
AvaII GGWCC 2 cut(s) 714, 850
BanI GGYRCC 1 cut(s) 1121
BarI GAAGNNNNNNTAC 1 cut(s) 1702
BauI CACGAG 2 cut(s) 441, 1442
BbsI GAAGAC 1 cut(s) 572
Bbv12I GWGCWC 1 cut(s) 524
BbvCI CCTCAGC 2 cut(s) 1463, 1566
BccI CCATC 3 cut(s) 614, 884, 1300
BceAI ACGGC 4 cut(s) 1057, 1231, 1336, 1693
BciT130I CCWGG 2 cut(s) 616, 1454
BclI TGATCA 1 cut(s) 733
BcnI CCSGG 6 cut(s) 58, 210, 437, 845, 1012, 1193
BcoDI GTCTC 1 cut(s) 306
BfaI CTAG 4 cut(s) 579, 948, 975, 1729
BfoI RGCGCY 2 cut(s) 1125, 1672
BfuAI ACCTGC 1 cut(s) 428
BglI GCCNNNNNGGC 1 cut(s) 1373
BglII AGATCT 2 cut(s) 288, 454
BlpI GCTNAGC 1 cut(s) 986
BmcAI AGTACT 1 cut(s) 1727
Bme1390I CCNGG 8 cut(s) 58, 210, 437, 616, 845, 1012, 1193, 1454
Bme18I GGWCC 2 cut(s) 714, 850
BmgT120I GGNCC 5 cut(s) 714, 850, 944, 1190, 1537
BmiI GGNNCC 7 cut(s) 106, 124, 203, 604, 715, 716, 1123
BmrFI CCNGG 8 cut(s) 58, 210, 437, 616, 845, 1012, 1193, 1454
BmsI GCATC 1 cut(s) 1149
BpiI GAAGAC 1 cut(s) 572
BpmI CTGGAG 3 cut(s) 201, 965, 1085
Bpu10I CCTNAGC 3 cut(s) 411, 1463, 1566
Bpu1102I GCTNAGC 1 cut(s) 986
BpuMI CCSGG 6 cut(s) 58, 210, 437, 845, 1012, 1193
BsaHI GRCGYC 1 cut(s) 1122
BsaI GGTCTC 1 cut(s) 306
BsaJI CCNNGG 4 cut(s) 57, 353, 685, 1540
BsaWI WCCGGW 2 cut(s) 113, 1687
BsaXI ACNNNNNCTCC 4 cut(s) 506, 536, 1196, 1226
Bsc4I CCNNNNNNNGG 6 cut(s) 132, 436, 847, 902, 1011, 1306
Bse118I RCCGGY 1 cut(s) 1687
Bse1I ACTGG 2 cut(s) 466, 1072
Bse3DI GCAATG 1 cut(s) 154
BseBI CCWGG 2 cut(s) 616, 1454
BseDI CCNNGG 4 cut(s) 57, 353, 685, 1540
BseGI GGATG 1 cut(s) 1404
BseLI CCNNNNNNNGG 6 cut(s) 132, 436, 847, 902, 1011, 1306
BseMI GCAATG 1 cut(s) 154
BseMII CTCAG 4 cut(s) 402, 1000, 1454, 1580
BseNI ACTGG 2 cut(s) 466, 1072
BseYI CCCAGC 1 cut(s) 895
BsgI GTGCAG 2 cut(s) 249, 560
Bsh1285I CGRYCG 1 cut(s) 1244
BshFI GGCC 5 cut(s) 342, 945, 1191, 1539, 1564
BshNI GGYRCC 1 cut(s) 1121
BshTI ACCGGT 1 cut(s) 1687
BsiEI CGRYCG 1 cut(s) 1244
BsiHKAI GWGCWC 1 cut(s) 524
BsiWI CGTACG 1 cut(s) 1248
BslFI GGGAC 3 cut(s) 589, 727, 842
BslI CCNNNNNNNGG 6 cut(s) 132, 436, 847, 902, 1011, 1306
BsmAI GTCTC 1 cut(s) 306
BsmFI GGGAC 3 cut(s) 589, 727, 842
BsmI GAATGC 1 cut(s) 1638
BsnI GGCC 5 cut(s) 342, 945, 1191, 1539, 1564
Bso31I GGTCTC 1 cut(s) 306
Bsp1286I GDGCHC 1 cut(s) 524
Bsp143I GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
Bsp1720I GCTNAGC 1 cut(s) 986
Bsp19I CCATGG 1 cut(s) 353
BspANI GGCC 5 cut(s) 342, 945, 1191, 1539, 1564
BspCNI CTCAG 4 cut(s) 403, 999, 1455, 1579
BspHI TCATGA 1 cut(s) 879
BspLI GGNNCC 7 cut(s) 106, 124, 203, 604, 715, 716, 1123
BspMI ACCTGC 1 cut(s) 428
BspPI GGATC 1 cut(s) 215
BspQI GCTCTTC 2 cut(s) 1160, 1343
BspT107I GGYRCC 1 cut(s) 1121
BspTNI GGTCTC 1 cut(s) 306
BsrBI CCGCTC 2 cut(s) 788, 1497
BsrDI GCAATG 1 cut(s) 154
BsrFI RCCGGY 1 cut(s) 1687
BsrI ACTGG 2 cut(s) 466, 1072
BssAI RCCGGY 1 cut(s) 1687
BssECI CCNNGG 4 cut(s) 57, 353, 685, 1540
BssMI GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
BssNI GRCGYC 1 cut(s) 1122
BssSI CACGAG 2 cut(s) 441, 1442
BssT1I CCWWGG 1 cut(s) 353
Bst2BI CACGAG 2 cut(s) 441, 1442
Bst2UI CCWGG 2 cut(s) 616, 1454
Bst4CI ACNGT 2 cut(s) 494, 1001
Bst6I CTCTTC 3 cut(s) 191, 1160, 1343
BstACI GRCGYC 1 cut(s) 1122
BstAPI GCANNNNNTGC 1 cut(s) 1579
BstC8I GCNNGC 5 cut(s) 1132, 1189, 1369, 1625, 1673
BstDEI CTNAG 5 cut(s) 189, 411, 986, 1463, 1566
BstDSI CCRYGG 2 cut(s) 353, 685
BstENI CCTNNNNNAGG 1 cut(s) 845
BstF5I GGATG 1 cut(s) 1404
BstH2I RGCGCY 2 cut(s) 1125, 1672
BstHHI GCGC 2 cut(s) 1124, 1671
BstKTI GATC 8 cut(s) 223, 291, 457, 736, 1255, 1297, 1531, 1715
BstMAI GTCTC 1 cut(s) 306
BstMBI GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
BstMCI CGRYCG 1 cut(s) 1244
BstNI CCWGG 2 cut(s) 616, 1454
BstSCI CCNGG 8 cut(s) 56, 208, 435, 614, 843, 1010, 1191, 1452
BstV2I GAAGAC 1 cut(s) 572
BstX2I RGATCY 3 cut(s) 220, 288, 454
BstXI CCANNNNNNTGG 2 cut(s) 101, 1310
BstYI RGATCY 3 cut(s) 220, 288, 454
BsuRI GGCC 5 cut(s) 342, 945, 1191, 1539, 1564
BtgI CCRYGG 2 cut(s) 353, 685
BtgZI GCGATG 2 cut(s) 1394, 1631
BtsCI GGATG 1 cut(s) 1404
BtsI GCAGTG 2 cut(s) 543, 1089
BtsIMutI CAGTG 2 cut(s) 543, 1089
BveI ACCTGC 1 cut(s) 428
Cac8I GCNNGC 5 cut(s) 1132, 1189, 1369, 1625, 1673
CaiI CAGNNNCTG 1 cut(s) 1091
CciI TCATGA 1 cut(s) 879
CfoI GCGC 2 cut(s) 1124, 1671
Cfr10I RCCGGY 1 cut(s) 1687
Cfr13I GGNCC 5 cut(s) 714, 850, 944, 1190, 1537
CseI GACGC 4 cut(s) 412, 662, 943, 1355
Csp6I GTAC 2 cut(s) 1249, 1726
CspAI ACCGGT 1 cut(s) 1687
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviQI GTAC 2 cut(s) 1249, 1726
DdeI CTNAG 5 cut(s) 189, 411, 986, 1463, 1566
DinI GGCGCC 1 cut(s) 1123
DpnI GATC 8 cut(s) 222, 290, 456, 735, 1254, 1296, 1530, 1714
DpnII GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
Eam1104I CTCTTC 3 cut(s) 191, 1160, 1343
EarI CTCTTC 3 cut(s) 191, 1160, 1343
EciI GGCGGA 1 cut(s) 1560
Eco130I CCWWGG 1 cut(s) 353
Eco147I AGGCCT 1 cut(s) 1564
Eco31I GGTCTC 1 cut(s) 306
Eco47I GGWCC 2 cut(s) 714, 850
Eco47III AGCGCT 1 cut(s) 1670
Eco57I CTGAAG 2 cut(s) 308, 1344
EcoNI CCTNNNNNAGG 1 cut(s) 845
EcoO109I RGGNCCY 2 cut(s) 714, 850
EcoRII CCWGG 2 cut(s) 614, 1452
EcoT14I CCWWGG 1 cut(s) 353
EgeI GGCGCC 1 cut(s) 1123
EheI GGCGCC 1 cut(s) 1123
ErhI CCWWGG 1 cut(s) 353
FaqI GGGAC 3 cut(s) 589, 727, 842
FauI CCCGC 3 cut(s) 122, 566, 781
FauNDI CATATG 1 cut(s) 404
FbaI TGATCA 1 cut(s) 733
FokI GGATG 1 cut(s) 1411
FspBI CTAG 4 cut(s) 579, 948, 975, 1729
GlaI GCGC 2 cut(s) 1123, 1670
GsaI CCCAGC 1 cut(s) 899
GsuI CTGGAG 3 cut(s) 201, 965, 1085
HaeII RGCGCY 2 cut(s) 1125, 1672
HaeIII GGCC 5 cut(s) 342, 945, 1191, 1539, 1564
HgaI GACGC 4 cut(s) 412, 662, 943, 1355
HhaI GCGC 2 cut(s) 1124, 1671
Hin1I GRCGYC 1 cut(s) 1122
Hin6I GCGC 2 cut(s) 1122, 1669
HinP1I GCGC 2 cut(s) 1122, 1669
HincII GTYRAC 1 cut(s) 958
HindII GTYRAC 1 cut(s) 958
HinfI GANTC 5 cut(s) 256, 690, 780, 1315, 1682
Hpy166II GTNNAC 4 cut(s) 400, 427, 682, 958
Hpy188I TCNGA 5 cut(s) 225, 309, 547, 564, 785
Hpy188III TCNNGA 6 cut(s) 74, 218, 880, 1028, 1102, 1442
Hpy8I GTNNAC 4 cut(s) 400, 427, 682, 958
Hpy99I CGWCG 1 cut(s) 271
HpyCH4III ACNGT 2 cut(s) 494, 1001
HpyCH4IV ACGT 1 cut(s) 1233
HpyCH4V TGCA 8 cut(s) 88, 100, 230, 294, 536, 541, 1162, 1582
HpyF3I CTNAG 5 cut(s) 189, 411, 986, 1463, 1566
HpySE526I ACGT 1 cut(s) 1233
Hsp92I GRCGYC 1 cut(s) 1122
HspAI GCGC 2 cut(s) 1122, 1669
KasI GGCGCC 1 cut(s) 1121
KflI GGGWCCC 1 cut(s) 714
Ksp22I TGATCA 1 cut(s) 733
Kzo9I GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
LguI GCTCTTC 2 cut(s) 1160, 1343
LweI GCATC 1 cut(s) 1149
MaeI CTAG 4 cut(s) 579, 948, 975, 1729
MaeII ACGT 1 cut(s) 1233
MaeIII GTNAC 9 cut(s) 140, 157, 512, 650, 1174, 1234, 1343, 1385, 1439
MalI GATC 8 cut(s) 222, 290, 456, 735, 1254, 1296, 1530, 1714
MbiI CCGCTC 2 cut(s) 788, 1497
MboI GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
MboII GAAGA 9 cut(s) 38, 74, 205, 208, 577, 677, 1177, 1330, 1722
MflI RGATCY 3 cut(s) 220, 288, 454
MhlI GDGCHC 1 cut(s) 524
MluCI AATT 1 cut(s) 1576
Mly113I GGCGCC 1 cut(s) 1122
MlyI GAGTC 3 cut(s) 250, 684, 1676
MmeI TCCRAC 4 cut(s) 132, 1017, 1303, 1584
MroXI GAANNNNTTC 4 cut(s) 66, 913, 1169, 1649
MseI TTAA 2 cut(s) 468, 1419
MslI CAYNNNNRTG 5 cut(s) 99, 755, 773, 1181, 1397
MspA1I CMGCKG 3 cut(s) 85, 1288, 1364
MspR9I CCNGG 8 cut(s) 58, 210, 437, 616, 845, 1012, 1193, 1454
Mva1269I GAATGC 1 cut(s) 1638
MvaI CCWGG 2 cut(s) 616, 1454
NarI GGCGCC 1 cut(s) 1122
NciI CCSGG 6 cut(s) 58, 210, 437, 845, 1012, 1193
NcoI CCATGG 1 cut(s) 353
NdeI CATATG 1 cut(s) 404
NdeII GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
NlaIV GGNNCC 7 cut(s) 106, 124, 203, 604, 715, 716, 1123
NmeAIII GCCGAG 3 cut(s) 1352, 1521, 1653
NmuCI GTSAC 8 cut(s) 157, 512, 650, 1174, 1234, 1343, 1385, 1439
PagI TCATGA 1 cut(s) 879
PceI AGGCCT 1 cut(s) 1564
PciSI GCTCTTC 2 cut(s) 1160, 1343
PctI GAATGC 1 cut(s) 1638
PdmI GAANNNNTTC 4 cut(s) 66, 913, 1169, 1649
PfeI GAWTC 2 cut(s) 780, 1315
Pfl23II CGTACG 1 cut(s) 1248
PflFI GACNNNGTC 1 cut(s) 854
PflMI CCANNNNNTGG 1 cut(s) 1306
PfoI TCCNGGA 3 cut(s) 208, 614, 843
PinAI ACCGGT 1 cut(s) 1687
PleI GAGTC 3 cut(s) 250, 684, 1676
PluTI GGCGCC 1 cut(s) 1125
PpsI GAGTC 3 cut(s) 250, 684, 1676
PpuMI RGGWCCY 2 cut(s) 714, 850
Psp5II RGGWCCY 2 cut(s) 714, 850
Psp6I CCWGG 2 cut(s) 614, 1452
PspFI CCCAGC 1 cut(s) 895
PspGI CCWGG 2 cut(s) 614, 1452
PspLI CGTACG 1 cut(s) 1248
PspN4I GGNNCC 7 cut(s) 106, 124, 203, 604, 715, 716, 1123
PspPI GGNCC 5 cut(s) 714, 850, 944, 1190, 1537
PspPPI RGGWCCY 2 cut(s) 714, 850
PstNI CAGNNNCTG 1 cut(s) 1091
PsuI RGATCY 3 cut(s) 220, 288, 454
PsyI GACNNNGTC 1 cut(s) 854
PvuII CAGCTG 3 cut(s) 85, 1288, 1364
RsaI GTAC 2 cut(s) 1250, 1727
RsaNI GTAC 2 cut(s) 1249, 1726
RseI CAYNNNNRTG 5 cut(s) 99, 755, 773, 1181, 1397
SapI GCTCTTC 2 cut(s) 1160, 1343
SaqAI TTAA 2 cut(s) 468, 1419
Sau3AI GATC 8 cut(s) 220, 288, 454, 733, 1252, 1294, 1528, 1712
Sau96I GGNCC 5 cut(s) 714, 850, 944, 1190, 1537
ScaI AGTACT 1 cut(s) 1727
SchI GAGTC 3 cut(s) 250, 684, 1676
ScrFI CCNGG 8 cut(s) 58, 210, 437, 616, 845, 1012, 1193, 1454
SduI GDGCHC 1 cut(s) 524
SfaNI GCATC 1 cut(s) 1149
SfoI GGCGCC 1 cut(s) 1123
SgrAI CRCCGGYG 1 cut(s) 1687
SinI GGWCC 2 cut(s) 714, 850
SmiMI CAYNNNNRTG 5 cut(s) 99, 755, 773, 1181, 1397
Sse9I AATT 1 cut(s) 1576
SseBI AGGCCT 1 cut(s) 1564
SspDI GGCGCC 1 cut(s) 1121
SspI AATATT 1 cut(s) 10
SspMI CTAG 4 cut(s) 579, 948, 975, 1729
StuI AGGCCT 1 cut(s) 1564
StyD4I CCNGG 8 cut(s) 56, 208, 435, 614, 843, 1010, 1191, 1452
StyI CCWWGG 1 cut(s) 353
TaaI ACNGT 2 cut(s) 494, 1001
TaiI ACGT 1 cut(s) 1236
TaqI TCGA 1 cut(s) 1240
TasI AATT 1 cut(s) 1576
TatI WGTACW 1 cut(s) 1725
TauI GCSGC 4 cut(s) 945, 1379, 1500, 1503
TfiI GAWTC 2 cut(s) 780, 1315
Tru1I TTAA 2 cut(s) 468, 1419
Tru9I TTAA 2 cut(s) 468, 1419
TscAI CASTG 2 cut(s) 543, 1096
TseFI GTSAC 8 cut(s) 157, 512, 650, 1174, 1234, 1343, 1385, 1439
Tsp45I GTSAC 8 cut(s) 157, 512, 650, 1174, 1234, 1343, 1385, 1439
TspDTI ATGAA 6 cut(s) 59, 713, 773, 848, 896, 1658
TspGWI ACGGA 3 cut(s) 395, 702, 815
TspRI CASTG 2 cut(s) 543, 1096
Tth111I GACNNNGTC 1 cut(s) 854
Van91I CCANNNNNTGG 1 cut(s) 1306
VpaK11BI GGWCC 2 cut(s) 714, 850
XagI CCTNNNNNAGG 1 cut(s) 845
XapI RAATTY 1 cut(s) 1576
XcmI CCANNNNNNNNNTGG 2 cut(s) 772, 1307
XmnI GAANNNNTTC 4 cut(s) 66, 913, 1169, 1649
XspI CTAG 4 cut(s) 579, 948, 975, 1729
ZrmI AGTACT 1 cut(s) 1727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.