MD03G1288600.v1.1

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0007448
Physical Location & Seq
Forward (+)
36723856 .. 36727511
3656 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1288600.v1.1.491

Sequence Viewer

Length: 1593 bp
ATGCCCGGAATTTCGAGTATAGTTGGGCGAGAAAATTGCGAAAGCTACTTGATTTTCCAGGGTGAAACAGGCCTCGGGGCTGGTTTTCGGACTTTCTTATACTTTCTTGGTCTTGCGTACTGTTTCCTTGGGCTATCTGCTATTACTGCTCGCTTTTTCCGGTCTATGGAGAGTGTTGTGAGCCACTCGCGGAAGGTGGTAGACATCGATCCTTACACTGGTGCTGAAGTTCTTAGGTATGAGAAAGTGTGGAACTTCACAATTGCAGACATTAGCCTGCTGGCCTTTGGGACTAGCTTTCCTCAAATATCATTGGCCACGATTGATGCTATAAGAAACCTTGGGAACCTGTATGCCGGAGGTTTGGGTCCTGGAACACTAGTCGGTTCTGCTGCATTCGACCTTTTCCCCATCCATGCTGTATGCGTTGTCGTTCCTAAAGCTGGAGAGCTGAAAAAGATAGCTGATATAGGAGTCTGGCTAGTTGAGCTCTTTTGGTCTTTTTGGGCCTATATTTGGCTATACATTATTTTAGAGGTGTGGACACCAAACGTGATTACACTATGGGAGGCCTTATTGACAGTACTGCAATATGCATTTCTGCTGATACATGCTTATGCTCAAGACAAGCGTTGGCCTTACGTTTCTCTTCCCTTCCCAAGAAGTGAGAGACCAGAGGATTGGGTGCCAGCTGAGGTTGTTACAGGCAAGCATGATACTGATCCCTGCAACGAGTACTCCAATATACTTGAAGTTGGTGAAGACAAAAACAGGAACGTTGACATTTTTTCCATACATTCAGAAAGTGGTTTAGGTCCAAAGTATAAAAAAGTTCCTGGAATTGATGAAACTCCCGAATCCTCAAACAAAGATTTCCAAGAGAATATGATATCACAAGACCATCATGTGTTTGCAATTTGGAGACAACAGTTTGTGGACGCAGTCAAGTTAGAAGACACGGAATCAAGAAAACTGAACAACATCTATTTGCGAGTAGCAAGAATTTTGTGGCAGTTACTTCTTGCTCCGTGGAGACTACTATTCGCATTTGTGCCTCCTTATCATATTGCTCATGGCTGGGTCGCCTTTATCGGCTCCTTAATTTTCATCAGTGCAATAGCTTACGTTGTAACAAAACTCACAGATCTCATAAGCTGTGTCACAGGAATAAACCCTTACGTCATAGCATTTACTGCATTAGCAAGTGGAACTTCGTGGCCGGATTTAGTAGCAAGTAAGATTGCTGCTGAACGTCAGCTTACAGCTGACTCTGCCATTGCAAACATTACTTGCAGCAATTCGGTGAATATATATGTTGGCATTGGTGTTCCGTGGCTGATTGACACTGCATACAATTTCTTCGTATACAAGGAACCGCTGCGGATTGAGAACGCAGCGGGTCTTAGCTTCTCGCTGCTGGTATTTTTCTCGACTTCTGTAGGATGTATCGCGGTTCTGGTAATTAGGCGTCTAGCGTTGGGTGCTGAGCTCGGAGGGCCAAGGCTTTGGGCATGGATTACCTCTGCGTTTTTCATGTTGCTTTGGTTGATTTTTGTTGTGCTTTCTTCTCTCAAGGTTTCTGATATCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003008 GO:0003674 GO:0005215 GO:0005432 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005856 GO:0005874 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0007204 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0007584 GO:0007610 GO:0007611 GO:0007612 GO:0007613 GO:0008150 GO:0008324 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010646 GO:0010647 GO:0014070 GO:0015075 GO:0015077 GO:0015081 GO:0015085 GO:0015291 GO:0015297 GO:0015298 GO:0015318 GO:0015368 GO:0015491 GO:0015630 GO:0015672 GO:0016020 GO:0016021 GO:0019725 GO:0021537 GO:0022804 GO:0022857 GO:0022890 GO:0023051 GO:0023056 GO:0030001 GO:0030003 GO:0030425 GO:0030900 GO:0031224 GO:0031226 GO:0031667 GO:0032501 GO:0032502 GO:0033273 GO:0033280 GO:0033993 GO:0034220 GO:0035725 GO:0036477 GO:0042221 GO:0042592 GO:0042995 GO:0043005 GO:0043025 GO:0043197 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044297 GO:0044309 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045202 GO:0046873 GO:0048167 GO:0048168 GO:0048172 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050804 GO:0050806 GO:0050877 GO:0050890 GO:0050896 GO:0051179 GO:0051234 GO:0051480 GO:0051641 GO:0051649 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060291 GO:0060322 GO:0060401 GO:0060402 GO:0065007 GO:0065008 GO:0070509 GO:0070588 GO:0070838 GO:0071944 GO:0072503 GO:0072507 GO:0072511 GO:0097447 GO:0097458 GO:0097553 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098703 GO:0098739 GO:0098771 GO:0098794 GO:0099080 GO:0099081 GO:0099177 GO:0099512 GO:0099513 GO:0099516 GO:0099587 GO:0120025 GO:0120038 GO:1901660 GO:1901700 GO:1902656 GO:1990034
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_Ca_ex

Protein Analysis

531

Amino Acids

59.19

Weight (kDa)

5.56

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_Ca_ex PF01699 34 - 206 3.5e-16 Sodium/calcium exchanger protein
Na_Ca_ex PF01699 358 - 522 6.2e-24 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 685
AccI GTMKAC 2 cut(s) 201, 1365
AccII CGCG 2 cut(s) 190, 1451
AciI CCGC 5 cut(s) 190, 1376, 1381, 1397, 1451
AclI AACGTT 1 cut(s) 777
AclWI GGATC 2 cut(s) 203, 716
AcoI YGGCCR 2 cut(s) 315, 1217
AcsI RAATTY 2 cut(s) 9, 1002
AcuI CTGAAG 1 cut(s) 246
AcyI GRCGYC 1 cut(s) 1468
AfaI GTAC 3 cut(s) 119, 585, 737
AfiI CCNNNNNNNGG 4 cut(s) 166, 218, 443, 516
AgsI TTSAA 1 cut(s) 752
AhlI ACTAGT 1 cut(s) 379
AjnI CCWGG 3 cut(s) 57, 370, 835
Alw21I GWGCWC 2 cut(s) 492, 1491
Alw26I GTCTC 3 cut(s) 664, 916, 1027
AlwI GGATC 2 cut(s) 203, 716
Ama87I CYCGRG 1 cut(s) 74
AoxI GGCC 8 cut(s) 70, 282, 315, 507, 570, 635, 1217, 1496
ApeKI GCWGC 6 cut(s) 392, 1244, 1293, 1378, 1394, 1414
ApoI RAATTY 2 cut(s) 9, 1002
AspS9I GGNCC 4 cut(s) 368, 507, 815, 1496
AsuC2I CCSGG 1 cut(s) 6
AsuHPI GGTGA 3 cut(s) 74, 770, 1315
AvaI CYCGRG 1 cut(s) 74
AvaII GGWCC 2 cut(s) 368, 815
BalI TGGCCA 1 cut(s) 317
BanI GGYRCC 1 cut(s) 685
BanII GRGCYC 2 cut(s) 492, 1491
BbsI GAAGAC 2 cut(s) 768, 960
Bbv12I GWGCWC 2 cut(s) 492, 1491
BbvCI CCTCAGC 1 cut(s) 693
BbvI GCAGC 6 cut(s) 379, 1231, 1305, 1365, 1401, 1406
BccI CCATC 2 cut(s) 419, 909
BcgI CGANNNNNNTGC 2 cut(s) 18, 52
BciT130I CCWGG 3 cut(s) 59, 372, 837
BcnI CCSGG 1 cut(s) 6
BcoDI GTCTC 3 cut(s) 664, 916, 1027
BcuI ACTAGT 1 cut(s) 379
BfaI CTAG 4 cut(s) 294, 380, 482, 1472
BfmI CTRYAG 1 cut(s) 1437
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 6 cut(s) 393, 1245, 1294, 1379, 1395, 1415
BlpI GCTNAGC 1 cut(s) 1485
BlsI GCNGC 6 cut(s) 394, 1246, 1295, 1380, 1396, 1416
BmcAI AGTACT 2 cut(s) 585, 737
Bme1390I CCNGG 4 cut(s) 6, 59, 372, 837
Bme18I GGWCC 2 cut(s) 368, 815
BmeT110I CYCGRG 1 cut(s) 74
BmgT120I GGNCC 4 cut(s) 368, 507, 815, 1496
BmiI GGNNCC 5 cut(s) 347, 369, 687, 1096, 1374
BmrFI CCNGG 4 cut(s) 6, 59, 372, 837
BmsI GCATC 1 cut(s) 316
BpiI GAAGAC 2 cut(s) 768, 960
BpmI CTGGAG 1 cut(s) 465
Bpu10I CCTNAGC 1 cut(s) 693
Bpu1102I GCTNAGC 1 cut(s) 1485
BpuEI CTTGAG 2 cut(s) 606, 1556
BpuMI CCSGG 1 cut(s) 6
Bsa29I ATCGAT 1 cut(s) 207
BsaBI GATNNNNATC 1 cut(s) 720
BsaHI GRCGYC 1 cut(s) 1468
BsaI GGTCTC 1 cut(s) 664
BsaJI CCNNGG 7 cut(s) 58, 73, 127, 340, 1028, 1331, 1499
BsaWI WCCGGW 1 cut(s) 159
BsaXI ACNNNNNCTCC 2 cut(s) 722, 752
Bsc4I CCNNNNNNNGG 4 cut(s) 166, 218, 443, 516
Bse1I ACTGG 1 cut(s) 223
Bse3DI GCAATG 1 cut(s) 1275
Bse8I GATNNNNATC 1 cut(s) 720
BseBI CCWGG 3 cut(s) 59, 372, 837
BseCI ATCGAT 1 cut(s) 207
BseDI CCNNGG 7 cut(s) 58, 73, 127, 340, 1028, 1331, 1499
BseGI GGATG 2 cut(s) 411, 1448
BseJI GATNNNNATC 1 cut(s) 720
BseLI CCNNNNNNNGG 4 cut(s) 166, 218, 443, 516
BseMI GCAATG 1 cut(s) 1275
BseMII CTCAG 2 cut(s) 684, 1476
BseNI ACTGG 1 cut(s) 223
BseXI GCAGC 6 cut(s) 379, 1231, 1305, 1365, 1401, 1406
BseYI CCCAGC 1 cut(s) 1077
Bsh1236I CGCG 2 cut(s) 190, 1451
BshFI GGCC 8 cut(s) 72, 284, 317, 509, 572, 637, 1219, 1498
BshNI GGYRCC 1 cut(s) 685
BshVI ATCGAT 1 cut(s) 207
BsiHKAI GWGCWC 2 cut(s) 492, 1491
BsiHKCI CYCGRG 1 cut(s) 74
BsiSI CCGG 4 cut(s) 6, 160, 357, 1220
BslFI GGGAC 1 cut(s) 304
BslI CCNNNNNNNGG 4 cut(s) 166, 218, 443, 516
BsmAI GTCTC 3 cut(s) 664, 916, 1027
BsmFI GGGAC 1 cut(s) 304
BsmI GAATGC 1 cut(s) 395
BsnI GGCC 8 cut(s) 72, 284, 317, 509, 572, 637, 1219, 1498
Bso31I GGTCTC 1 cut(s) 664
BsoBI CYCGRG 1 cut(s) 74
Bsp1286I GDGCHC 2 cut(s) 492, 1491
Bsp143I GATC 3 cut(s) 208, 721, 1144
Bsp1720I GCTNAGC 1 cut(s) 1485
BspACI CCGC 5 cut(s) 190, 1376, 1381, 1397, 1451
BspANI GGCC 8 cut(s) 72, 284, 317, 509, 572, 637, 1219, 1498
BspCNI CTCAG 2 cut(s) 685, 1477
BspDI ATCGAT 1 cut(s) 207
BspFNI CGCG 2 cut(s) 190, 1451
BspLI GGNNCC 5 cut(s) 347, 369, 687, 1096, 1374
BspPI GGATC 2 cut(s) 203, 716
BspT107I GGYRCC 1 cut(s) 685
BspTNI GGTCTC 1 cut(s) 664
BsrDI GCAATG 1 cut(s) 1275
BsrI ACTGG 1 cut(s) 223
BssECI CCNNGG 7 cut(s) 58, 73, 127, 340, 1028, 1331, 1499
BssMI GATC 3 cut(s) 208, 721, 1144
BssNAI GTATAC 1 cut(s) 1366
BssNI GRCGYC 1 cut(s) 1468
BssT1I CCWWGG 3 cut(s) 127, 340, 1499
Bst1107I GTATAC 1 cut(s) 1366
Bst2UI CCWGG 3 cut(s) 59, 372, 837
Bst4CI ACNGT 3 cut(s) 122, 583, 930
Bst6I CTCTTC 1 cut(s) 654
BstACI GRCGYC 1 cut(s) 1468
BstAPI GCANNNNNTGC 1 cut(s) 1193
BstC8I GCNNGC 5 cut(s) 151, 278, 282, 690, 710
BstDEI CTNAG 4 cut(s) 233, 693, 1403, 1485
BstDSI CCRYGG 2 cut(s) 1028, 1331
BstF5I GGATG 2 cut(s) 411, 1448
BstFNI CGCG 2 cut(s) 190, 1451
BstKTI GATC 3 cut(s) 211, 724, 1147
BstMAI GTCTC 3 cut(s) 664, 916, 1027
BstMBI GATC 3 cut(s) 208, 721, 1144
BstMWI GCNNNNNNNGC 6 cut(s) 146, 487, 1193, 1271, 1481, 1495
BstNI CCWGG 3 cut(s) 59, 372, 837
BstNSI RCATGY 1 cut(s) 614
BstSCI CCNGG 4 cut(s) 4, 57, 370, 835
BstSFI CTRYAG 1 cut(s) 1437
BstUI CGCG 2 cut(s) 190, 1451
BstV1I GCAGC 6 cut(s) 379, 1231, 1305, 1365, 1401, 1406
BstV2I GAAGAC 2 cut(s) 768, 960
BstX2I RGATCY 1 cut(s) 1144
BstXI CCANNNNNNTGG 2 cut(s) 681, 1506
BstYI RGATCY 1 cut(s) 1144
BstZ17I GTATAC 1 cut(s) 1366
Bsu15I ATCGAT 1 cut(s) 207
BsuRI GGCC 8 cut(s) 72, 284, 317, 509, 572, 637, 1219, 1498
BsuTUI ATCGAT 1 cut(s) 207
BtgI CCRYGG 2 cut(s) 1028, 1331
BtsCI GGATG 2 cut(s) 411, 1448
BtsI GCAGTG 1 cut(s) 1344
BtsIMutI CAGTG 3 cut(s) 216, 1117, 1344
Cac8I GCNNGC 5 cut(s) 151, 278, 282, 690, 710
Cfr13I GGNCC 4 cut(s) 368, 507, 815, 1496
ClaI ATCGAT 1 cut(s) 207
CseI GACGC 2 cut(s) 947, 1457
Csp6I GTAC 3 cut(s) 118, 584, 736
CviAII CATG 7 cut(s) 416, 611, 713, 905, 1073, 1512, 1534
CviQI GTAC 3 cut(s) 118, 584, 736
DdeI CTNAG 4 cut(s) 233, 693, 1403, 1485
DpnI GATC 3 cut(s) 210, 723, 1146
DpnII GATC 3 cut(s) 208, 721, 1144
EaeI YGGCCR 2 cut(s) 315, 1217
Eam1104I CTCTTC 1 cut(s) 654
EarI CTCTTC 1 cut(s) 654
Ecl136II GAGCTC 2 cut(s) 490, 1489
Eco130I CCWWGG 3 cut(s) 127, 340, 1499
Eco147I AGGCCT 2 cut(s) 72, 572
Eco24I GRGCYC 2 cut(s) 492, 1491
Eco31I GGTCTC 1 cut(s) 664
Eco32I GATATC 2 cut(s) 891, 1585
Eco47I GGWCC 2 cut(s) 368, 815
Eco53kI GAGCTC 2 cut(s) 490, 1489
Eco57I CTGAAG 1 cut(s) 246
Eco88I CYCGRG 1 cut(s) 74
EcoICRI GAGCTC 2 cut(s) 490, 1489
EcoO109I RGGNCCY 1 cut(s) 368
EcoRII CCWGG 3 cut(s) 57, 370, 835
EcoRV GATATC 2 cut(s) 891, 1585
EcoT14I CCWWGG 3 cut(s) 127, 340, 1499
EcoT22I ATGCAT 1 cut(s) 598
EcoT38I GRGCYC 2 cut(s) 492, 1491
ErhI CCWWGG 3 cut(s) 127, 340, 1499
FaeI CATG 7 cut(s) 419, 614, 716, 908, 1076, 1515, 1537
FalI AAGNNNNNCTT 2 cut(s) 1195, 1227
FaqI GGGAC 1 cut(s) 304
FatI CATG 7 cut(s) 415, 610, 712, 904, 1072, 1511, 1533
FauI CCCGC 1 cut(s) 1390
FauNDI CATATG 1 cut(s) 1589
FblI GTMKAC 2 cut(s) 201, 1365
Fnu4HI GCNGC 6 cut(s) 393, 1245, 1294, 1379, 1395, 1415
FokI GGATG 2 cut(s) 398, 1455
FriOI GRGCYC 2 cut(s) 492, 1491
Fsp4HI GCNGC 6 cut(s) 393, 1245, 1294, 1379, 1395, 1415
FspBI CTAG 4 cut(s) 294, 380, 482, 1472
GluI GCNGC 6 cut(s) 393, 1245, 1294, 1379, 1395, 1415
GsaI CCCAGC 1 cut(s) 1081
GsuI CTGGAG 1 cut(s) 465
HaeIII GGCC 8 cut(s) 72, 284, 317, 509, 572, 637, 1219, 1498
HapII CCGG 4 cut(s) 6, 160, 357, 1220
HgaI GACGC 2 cut(s) 947, 1457
Hin1I GRCGYC 1 cut(s) 1468
Hin1II CATG 7 cut(s) 419, 614, 716, 908, 1076, 1515, 1537
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HinfI GANTC 4 cut(s) 474, 857, 962, 1268
HpaII CCGG 4 cut(s) 6, 160, 357, 1220
HphI GGTGA 3 cut(s) 74, 770, 1315
Hpy166II GTNNAC 5 cut(s) 202, 543, 781, 937, 1366
Hpy188I TCNGA 4 cut(s) 90, 802, 1493, 1582
Hpy188III TCNNGA 4 cut(s) 623, 854, 966, 1429
Hpy8I GTNNAC 5 cut(s) 202, 543, 781, 937, 1366
HpyAV CCTTC 2 cut(s) 187, 664
HpyCH4III ACNGT 3 cut(s) 122, 583, 930
HpyCH4IV ACGT 6 cut(s) 552, 642, 777, 1125, 1179, 1252
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 487, 1193, 1271, 1481, 1495
HpyF3I CTNAG 4 cut(s) 233, 693, 1403, 1485
HpySE526I ACGT 6 cut(s) 552, 642, 777, 1125, 1179, 1252
Hsp92I GRCGYC 1 cut(s) 1468
Hsp92II CATG 7 cut(s) 419, 614, 716, 908, 1076, 1515, 1537
Kzo9I GATC 3 cut(s) 208, 721, 1144
LmnI GCTCC 2 cut(s) 1030, 1100
Lsp1109I GCAGC 6 cut(s) 379, 1231, 1305, 1365, 1401, 1406
LweI GCATC 1 cut(s) 316
MaeI CTAG 4 cut(s) 294, 380, 482, 1472
MaeII ACGT 6 cut(s) 552, 642, 777, 1125, 1179, 1252
MaeIII GTNAC 4 cut(s) 700, 1014, 1129, 1159
MalI GATC 3 cut(s) 210, 723, 1146
MboI GATC 3 cut(s) 208, 721, 1144
MboII GAAGA 5 cut(s) 641, 773, 965, 1351, 1557
MfeI CAATTG 1 cut(s) 261
MflI RGATCY 1 cut(s) 1144
MhlI GDGCHC 2 cut(s) 492, 1491
MlsI TGGCCA 1 cut(s) 317
MluNI TGGCCA 1 cut(s) 317
MlyI GAGTC 2 cut(s) 483, 1262
Mox20I TGGCCA 1 cut(s) 317
Mph1103I ATGCAT 1 cut(s) 598
MscI TGGCCA 1 cut(s) 317
MseI TTAA 1 cut(s) 1100
MslI CAYNNNNRTG 1 cut(s) 615
Msp20I TGGCCA 1 cut(s) 317
MspA1I CMGCKG 4 cut(s) 692, 1265, 1378, 1397
MspI CCGG 4 cut(s) 6, 160, 357, 1220
MspR9I CCNGG 4 cut(s) 6, 59, 372, 837
MunI CAATTG 1 cut(s) 261
Mva1269I GAATGC 1 cut(s) 395
MvaI CCWGG 3 cut(s) 59, 372, 837
MvnI CGCG 2 cut(s) 190, 1451
MwoI GCNNNNNNNGC 6 cut(s) 146, 487, 1193, 1271, 1481, 1495
NciI CCSGG 1 cut(s) 6
NdeI CATATG 1 cut(s) 1589
NdeII GATC 3 cut(s) 208, 721, 1144
NlaIII CATG 7 cut(s) 419, 614, 716, 908, 1076, 1515, 1537
NlaIV GGNNCC 5 cut(s) 347, 369, 687, 1096, 1374
NmuCI GTSAC 1 cut(s) 1159
NsiI ATGCAT 1 cut(s) 598
NspI RCATGY 1 cut(s) 614
PceI AGGCCT 2 cut(s) 72, 572
PctI GAATGC 1 cut(s) 395
PfeI GAWTC 2 cut(s) 857, 962
PflFI GACNNNGTC 1 cut(s) 941
PfoI TCCNGGA 2 cut(s) 370, 835
PkrI GCNGC 6 cut(s) 394, 1246, 1295, 1380, 1396, 1416
PleI GAGTC 2 cut(s) 482, 1262
PpsI GAGTC 2 cut(s) 482, 1262
PpuMI RGGWCCY 1 cut(s) 368
Psp124BI GAGCTC 2 cut(s) 492, 1491
Psp1406I AACGTT 1 cut(s) 777
Psp5II RGGWCCY 1 cut(s) 368
Psp6I CCWGG 3 cut(s) 57, 370, 835
PspFI CCCAGC 1 cut(s) 1077
PspGI CCWGG 3 cut(s) 57, 370, 835
PspN4I GGNNCC 5 cut(s) 347, 369, 687, 1096, 1374
PspPI GGNCC 4 cut(s) 368, 507, 815, 1496
PspPPI RGGWCCY 1 cut(s) 368
PsuI RGATCY 1 cut(s) 1144
PsyI GACNNNGTC 1 cut(s) 941
PvuII CAGCTG 2 cut(s) 692, 1265
RsaI GTAC 3 cut(s) 119, 585, 737
RsaNI GTAC 3 cut(s) 118, 584, 736
RseI CAYNNNNRTG 1 cut(s) 615
SacI GAGCTC 2 cut(s) 492, 1491
SaqAI TTAA 1 cut(s) 1100
SatI GCNGC 6 cut(s) 393, 1245, 1294, 1379, 1395, 1415
Sau3AI GATC 3 cut(s) 208, 721, 1144
Sau96I GGNCC 4 cut(s) 368, 507, 815, 1496
ScaI AGTACT 2 cut(s) 585, 737
SchI GAGTC 2 cut(s) 483, 1262
ScrFI CCNGG 4 cut(s) 6, 59, 372, 837
SduI GDGCHC 2 cut(s) 492, 1491
SfaNI GCATC 1 cut(s) 316
SfcI CTRYAG 1 cut(s) 1437
SinI GGWCC 2 cut(s) 368, 815
SmiMI CAYNNNNRTG 1 cut(s) 615
SmlI CTYRAG 2 cut(s) 621, 1571
SmoI CTYRAG 2 cut(s) 621, 1571
SpeI ACTAGT 1 cut(s) 379
SseBI AGGCCT 2 cut(s) 72, 572
SsiI CCGC 5 cut(s) 190, 1376, 1381, 1397, 1451
SspMI CTAG 4 cut(s) 294, 380, 482, 1472
SstI GAGCTC 2 cut(s) 492, 1491
StuI AGGCCT 2 cut(s) 72, 572
StyD4I CCNGG 4 cut(s) 4, 57, 370, 835
StyI CCWWGG 3 cut(s) 127, 340, 1499
TaaI ACNGT 3 cut(s) 122, 583, 930
TaiI ACGT 6 cut(s) 555, 645, 780, 1128, 1182, 1255
TaqI TCGA 4 cut(s) 14, 207, 399, 1430
TatI WGTACW 2 cut(s) 583, 735
TfiI GAWTC 2 cut(s) 857, 962
Tru1I TTAA 1 cut(s) 1100
Tru9I TTAA 1 cut(s) 1100
TscAI CASTG 3 cut(s) 223, 1117, 1351
TseFI GTSAC 1 cut(s) 1159
TseI GCWGC 6 cut(s) 392, 1244, 1293, 1378, 1394, 1414
Tsp45I GTSAC 1 cut(s) 1159
TspDTI ATGAA 3 cut(s) 861, 1096, 1522
TspGWI ACGGA 3 cut(s) 974, 1017, 1320
TspRI CASTG 3 cut(s) 223, 1117, 1351
Tth111I GACNNNGTC 1 cut(s) 941
VpaK11BI GGWCC 2 cut(s) 368, 815
XapI RAATTY 2 cut(s) 9, 1002
XceI RCATGY 1 cut(s) 614
XmiI GTMKAC 2 cut(s) 201, 1365
XspI CTAG 4 cut(s) 294, 380, 482, 1472
ZrmI AGTACT 2 cut(s) 585, 737
Zsp2I ATGCAT 1 cut(s) 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.