Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47600 |
| fragaria_vesca | FvH4_2g25770 FvH4_2g25770 FvH4_2g25770 |
| malus_domestica | MD03G1288600.v1.1 |
| prunus_persica | Prupe.8G261900_v2.0.a1 Prupe.8G261900_v2.0.a1 |
| pyrus_communis | pycom03g22870 |
| rosa_chinensis | RchiOBHm_Chr6g0294071 RchiOBHm_Chr6g0294081 |
| rosa_laevigata | RLG00000011900 RLG00000011902 |
| rosa_multiflora | Rmu_sc0005126.1_g000001 Rmu_sc0005126.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00173670 Rroxscaffold_7G00173680 |
| rosa_rugosa | Rorug06G0240800 |
| rosa_samantha | Rh6AG353600 Rh6AG353700 Rh6BG360600 Rh6CG367700 Rh6CG367800 Rh6DG354500 |
| rosa_wichuraiana | Rw6G030800 Rw6G030810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1065 |
| AccB1I | GGYRCC | 1 cut(s) | 670 |
| AccI | GTMKAC | 1 cut(s) | 939 |
| AccII | CGCG | 1 cut(s) | 190 |
| AciI | CCGC | 3 cut(s) | 190, 1384, 1400 |
| AcoI | YGGCCR | 1 cut(s) | 1220 |
| AcsI | RAATTY | 2 cut(s) | 238, 1005 |
| AcyI | GRCGYC | 2 cut(s) | 84, 1471 |
| AfaI | GTAC | 1 cut(s) | 570 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 166, 428 |
| AflIII | ACRYGT | 1 cut(s) | 35 |
| AgsI | TTSAA | 1 cut(s) | 881 |
| AhlI | ACTAGT | 1 cut(s) | 364 |
| AjnI | CCWGG | 3 cut(s) | 4, 355, 1031 |
| Alw21I | GWGCWC | 1 cut(s) | 477 |
| Alw26I | GTCTC | 6 cut(s) | 205, 649, 713, 785, 832, 1030 |
| AoxI | GGCC | 5 cut(s) | 267, 555, 620, 1220, 1499 |
| ApeKI | GCWGC | 5 cut(s) | 377, 1247, 1296, 1397, 1446 |
| ApoI | RAATTY | 2 cut(s) | 238, 1005 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 732 |
| AspS9I | GGNCC | 5 cut(s) | 162, 276, 353, 621, 1499 |
| AsuC2I | CCSGG | 1 cut(s) | 89 |
| AsuHPI | GGTGA | 1 cut(s) | 761 |
| AvaII | GGWCC | 3 cut(s) | 162, 276, 353 |
| BalI | TGGCCA | 1 cut(s) | 1222 |
| BanI | GGYRCC | 1 cut(s) | 670 |
| BanII | GRGCYC | 1 cut(s) | 477 |
| BbsI | GAAGAC | 1 cut(s) | 1560 |
| Bbv12I | GWGCWC | 1 cut(s) | 477 |
| BbvI | GCAGC | 5 cut(s) | 364, 1234, 1308, 1409, 1433 |
| BccI | CCATC | 1 cut(s) | 404 |
| BciT130I | CCWGG | 3 cut(s) | 6, 357, 1033 |
| BclI | TGATCA | 1 cut(s) | 208 |
| BcnI | CCSGG | 1 cut(s) | 89 |
| BcoDI | GTCTC | 6 cut(s) | 205, 649, 713, 785, 832, 1030 |
| BcuI | ACTAGT | 1 cut(s) | 364 |
| BfaI | CTAG | 3 cut(s) | 204, 365, 518 |
| BisI | GCNGC | 5 cut(s) | 378, 1248, 1297, 1398, 1447 |
| BlpI | GCTNAGC | 1 cut(s) | 678 |
| BlsI | GCNGC | 5 cut(s) | 379, 1249, 1298, 1399, 1448 |
| BmcAI | AGTACT | 1 cut(s) | 570 |
| Bme1390I | CCNGG | 4 cut(s) | 6, 89, 357, 1033 |
| Bme18I | GGWCC | 3 cut(s) | 162, 276, 353 |
| BmgT120I | GGNCC | 5 cut(s) | 162, 276, 353, 621, 1499 |
| BmiI | GGNNCC | 3 cut(s) | 277, 354, 672 |
| BmrFI | CCNGG | 4 cut(s) | 6, 89, 357, 1033 |
| BmrI | ACTGGG | 1 cut(s) | 676 |
| BmsI | GCATC | 2 cut(s) | 301, 1332 |
| BmuI | ACTGGG | 1 cut(s) | 676 |
| BpiI | GAAGAC | 1 cut(s) | 1560 |
| BpmI | CTGGAG | 4 cut(s) | 97, 363, 450, 1054 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 678 |
| BpuEI | CTTGAG | 1 cut(s) | 591 |
| BpuMI | CCSGG | 1 cut(s) | 89 |
| Bsa29I | ATCGAT | 1 cut(s) | 309 |
| BsaBI | GATNNNNATC | 1 cut(s) | 136 |
| BsaHI | GRCGYC | 2 cut(s) | 84, 1471 |
| BsaI | GGTCTC | 3 cut(s) | 205, 649, 713 |
| BsaJI | CCNNGG | 4 cut(s) | 127, 165, 1031, 1334 |
| BsaWI | WCCGGW | 1 cut(s) | 159 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 166, 428 |
| Bse1I | ACTGG | 3 cut(s) | 671, 812, 908 |
| Bse3DI | GCAATG | 4 cut(s) | 1068, 1278, 1306, 1415 |
| Bse8I | GATNNNNATC | 1 cut(s) | 136 |
| BseBI | CCWGG | 3 cut(s) | 6, 357, 1033 |
| BseCI | ATCGAT | 1 cut(s) | 309 |
| BseDI | CCNNGG | 4 cut(s) | 127, 165, 1031, 1334 |
| BseGI | GGATG | 2 cut(s) | 396, 904 |
| BseJI | GATNNNNATC | 1 cut(s) | 136 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 166, 428 |
| BseMI | GCAATG | 4 cut(s) | 1068, 1278, 1306, 1415 |
| BseMII | CTCAG | 2 cut(s) | 843, 1452 |
| BseNI | ACTGG | 3 cut(s) | 671, 812, 908 |
| BseXI | GCAGC | 5 cut(s) | 364, 1234, 1308, 1409, 1433 |
| BseYI | CCCAGC | 1 cut(s) | 1080 |
| BsgI | GTGCAG | 1 cut(s) | 1506 |
| Bsh1236I | CGCG | 1 cut(s) | 190 |
| BshFI | GGCC | 5 cut(s) | 269, 557, 622, 1222, 1501 |
| BshNI | GGYRCC | 1 cut(s) | 670 |
| BshVI | ATCGAT | 1 cut(s) | 309 |
| BsiHKAI | GWGCWC | 1 cut(s) | 477 |
| BsiSI | CCGG | 2 cut(s) | 88, 160 |
| BslFI | GGGAC | 1 cut(s) | 289 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 166, 428 |
| BsmAI | GTCTC | 6 cut(s) | 205, 649, 713, 785, 832, 1030 |
| BsmFI | GGGAC | 1 cut(s) | 289 |
| BsmI | GAATGC | 3 cut(s) | 92, 380, 1399 |
| BsnI | GGCC | 5 cut(s) | 269, 557, 622, 1222, 1501 |
| Bso31I | GGTCTC | 3 cut(s) | 205, 649, 713 |
| Bsp1286I | GDGCHC | 1 cut(s) | 477 |
| Bsp143I | GATC | 3 cut(s) | 208, 901, 1147 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 678 |
| Bsp19I | CCATGG | 2 cut(s) | 165, 1334 |
| BspACI | CCGC | 3 cut(s) | 190, 1384, 1400 |
| BspANI | GGCC | 5 cut(s) | 269, 557, 622, 1222, 1501 |
| BspCNI | CTCAG | 2 cut(s) | 842, 1451 |
| BspDI | ATCGAT | 1 cut(s) | 309 |
| BspFNI | CGCG | 1 cut(s) | 190 |
| BspLI | GGNNCC | 3 cut(s) | 277, 354, 672 |
| BspT107I | GGYRCC | 1 cut(s) | 670 |
| BspTNI | GGTCTC | 3 cut(s) | 205, 649, 713 |
| BsrDI | GCAATG | 4 cut(s) | 1068, 1278, 1306, 1415 |
| BsrI | ACTGG | 3 cut(s) | 671, 812, 908 |
| BssECI | CCNNGG | 4 cut(s) | 127, 165, 1031, 1334 |
| BssMI | GATC | 3 cut(s) | 208, 901, 1147 |
| BssNI | GRCGYC | 2 cut(s) | 84, 1471 |
| BssT1I | CCWWGG | 3 cut(s) | 127, 165, 1334 |
| Bst2UI | CCWGG | 3 cut(s) | 6, 357, 1033 |
| Bst4CI | ACNGT | 3 cut(s) | 122, 148, 568 |
| Bst6I | CTCTTC | 1 cut(s) | 639 |
| BstACI | GRCGYC | 2 cut(s) | 84, 1471 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1196 |
| BstC8I | GCNNGC | 6 cut(s) | 263, 267, 675, 691, 695, 1237 |
| BstDEI | CTNAG | 4 cut(s) | 678, 829, 1406, 1438 |
| BstDSI | CCRYGG | 2 cut(s) | 165, 1334 |
| BstF5I | GGATG | 2 cut(s) | 396, 904 |
| BstFNI | CGCG | 1 cut(s) | 190 |
| BstKTI | GATC | 3 cut(s) | 211, 904, 1150 |
| BstMAI | GTCTC | 6 cut(s) | 205, 649, 713, 785, 832, 1030 |
| BstMBI | GATC | 3 cut(s) | 208, 901, 1147 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 472, 679, 1196, 1274, 1498 |
| BstNI | CCWGG | 3 cut(s) | 6, 357, 1033 |
| BstNSI | RCATGY | 3 cut(s) | 39, 599, 693 |
| BstSCI | CCNGG | 4 cut(s) | 4, 87, 355, 1031 |
| BstUI | CGCG | 1 cut(s) | 190 |
| BstV1I | GCAGC | 5 cut(s) | 364, 1234, 1308, 1409, 1433 |
| BstV2I | GAAGAC | 1 cut(s) | 1560 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 666, 1509 |
| Bsu15I | ATCGAT | 1 cut(s) | 309 |
| BsuRI | GGCC | 5 cut(s) | 269, 557, 622, 1222, 1501 |
| BsuTUI | ATCGAT | 1 cut(s) | 309 |
| BtgI | CCRYGG | 2 cut(s) | 165, 1334 |
| BtsCI | GGATG | 2 cut(s) | 396, 904 |
| BtsI | GCAGTG | 4 cut(s) | 623, 1311, 1347, 1379 |
| BtsIMutI | CAGTG | 7 cut(s) | 623, 819, 1120, 1143, 1311, 1347, 1379 |
| Cac8I | GCNNGC | 6 cut(s) | 263, 267, 675, 691, 695, 1237 |
| Cfr13I | GGNCC | 5 cut(s) | 162, 276, 353, 621, 1499 |
| ClaI | ATCGAT | 1 cut(s) | 309 |
| CseI | GACGC | 3 cut(s) | 73, 950, 1460 |
| Csp6I | GTAC | 1 cut(s) | 569 |
| CviQI | GTAC | 1 cut(s) | 569 |
| DdeI | CTNAG | 4 cut(s) | 678, 829, 1406, 1438 |
| DpnI | GATC | 3 cut(s) | 210, 903, 1149 |
| DpnII | GATC | 3 cut(s) | 208, 901, 1147 |
| EaeI | YGGCCR | 1 cut(s) | 1220 |
| Eam1104I | CTCTTC | 1 cut(s) | 639 |
| EarI | CTCTTC | 1 cut(s) | 639 |
| Ecl136II | GAGCTC | 1 cut(s) | 475 |
| Eco130I | CCWWGG | 3 cut(s) | 127, 165, 1334 |
| Eco147I | AGGCCT | 1 cut(s) | 557 |
| Eco24I | GRGCYC | 1 cut(s) | 477 |
| Eco31I | GGTCTC | 3 cut(s) | 205, 649, 713 |
| Eco47I | GGWCC | 3 cut(s) | 162, 276, 353 |
| Eco53kI | GAGCTC | 1 cut(s) | 475 |
| EcoICRI | GAGCTC | 1 cut(s) | 475 |
| EcoO109I | RGGNCCY | 1 cut(s) | 353 |
| EcoRII | CCWGG | 3 cut(s) | 4, 355, 1031 |
| EcoT14I | CCWWGG | 3 cut(s) | 127, 165, 1334 |
| EcoT38I | GRGCYC | 1 cut(s) | 477 |
| ErhI | CCWWGG | 3 cut(s) | 127, 165, 1334 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1198, 1230 |
| FaqI | GGGAC | 1 cut(s) | 289 |
| FauI | CCCGC | 1 cut(s) | 1393 |
| FbaI | TGATCA | 1 cut(s) | 208 |
| FblI | GTMKAC | 1 cut(s) | 939 |
| Fnu4HI | GCNGC | 5 cut(s) | 378, 1248, 1297, 1398, 1447 |
| FokI | GGATG | 2 cut(s) | 383, 891 |
| FriOI | GRGCYC | 1 cut(s) | 477 |
| Fsp4HI | GCNGC | 5 cut(s) | 378, 1248, 1297, 1398, 1447 |
| FspBI | CTAG | 3 cut(s) | 204, 365, 518 |
| GluI | GCNGC | 5 cut(s) | 378, 1248, 1297, 1398, 1447 |
| GsaI | CCCAGC | 1 cut(s) | 1084 |
| GsuI | CTGGAG | 4 cut(s) | 97, 363, 450, 1054 |
| HaeIII | GGCC | 5 cut(s) | 269, 557, 622, 1222, 1501 |
| HapII | CCGG | 2 cut(s) | 88, 160 |
| HgaI | GACGC | 3 cut(s) | 73, 950, 1460 |
| Hin1I | GRCGYC | 2 cut(s) | 84, 1471 |
| HincII | GTYRAC | 1 cut(s) | 1263 |
| HindII | GTYRAC | 1 cut(s) | 1263 |
| HindIII | AAGCTT | 2 cut(s) | 695, 1505 |
| HinfI | GANTC | 4 cut(s) | 459, 851, 965, 1271 |
| HpaII | CCGG | 2 cut(s) | 88, 160 |
| HphI | GGTGA | 1 cut(s) | 761 |
| Hpy166II | GTNNAC | 3 cut(s) | 528, 940, 1263 |
| Hpy188I | TCNGA | 3 cut(s) | 727, 790, 898 |
| Hpy188III | TCNNGA | 7 cut(s) | 76, 518, 608, 831, 848, 881, 969 |
| Hpy8I | GTNNAC | 3 cut(s) | 528, 940, 1263 |
| HpyAV | CCTTC | 3 cut(s) | 187, 740, 1099 |
| HpyCH4III | ACNGT | 3 cut(s) | 122, 148, 568 |
| HpyCH4IV | ACGT | 2 cut(s) | 537, 1255 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 472, 679, 1196, 1274, 1498 |
| HpyF3I | CTNAG | 4 cut(s) | 678, 829, 1406, 1438 |
| HpySE526I | ACGT | 2 cut(s) | 537, 1255 |
| Hsp92I | GRCGYC | 2 cut(s) | 84, 1471 |
| Ksp22I | TGATCA | 1 cut(s) | 208 |
| Kzo9I | GATC | 3 cut(s) | 208, 901, 1147 |
| LmnI | GCTCC | 1 cut(s) | 1033 |
| Lsp1109I | GCAGC | 5 cut(s) | 364, 1234, 1308, 1409, 1433 |
| LweI | GCATC | 2 cut(s) | 301, 1332 |
| MaeI | CTAG | 3 cut(s) | 204, 365, 518 |
| MaeII | ACGT | 2 cut(s) | 537, 1255 |
| MaeIII | GTNAC | 3 cut(s) | 582, 1132, 1162 |
| MalI | GATC | 3 cut(s) | 210, 903, 1149 |
| MboI | GATC | 3 cut(s) | 208, 901, 1147 |
| MboII | GAAGA | 3 cut(s) | 626, 911, 1560 |
| MhlI | GDGCHC | 1 cut(s) | 477 |
| MlsI | TGGCCA | 1 cut(s) | 1222 |
| MluNI | TGGCCA | 1 cut(s) | 1222 |
| MlyI | GAGTC | 2 cut(s) | 468, 1265 |
| Mox20I | TGGCCA | 1 cut(s) | 1222 |
| MroXI | GAANNNNTTC | 1 cut(s) | 732 |
| MscI | TGGCCA | 1 cut(s) | 1222 |
| MslI | CAYNNNNRTG | 1 cut(s) | 600 |
| Msp20I | TGGCCA | 1 cut(s) | 1222 |
| MspA1I | CMGCKG | 2 cut(s) | 1268, 1400 |
| MspI | CCGG | 2 cut(s) | 88, 160 |
| MspR9I | CCNGG | 4 cut(s) | 6, 89, 357, 1033 |
| Mva1269I | GAATGC | 3 cut(s) | 92, 380, 1399 |
| MvaI | CCWGG | 3 cut(s) | 6, 357, 1033 |
| MvnI | CGCG | 1 cut(s) | 190 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 472, 679, 1196, 1274, 1498 |
| NciI | CCSGG | 1 cut(s) | 89 |
| NcoI | CCATGG | 2 cut(s) | 165, 1334 |
| NdeII | GATC | 3 cut(s) | 208, 901, 1147 |
| NlaIV | GGNNCC | 3 cut(s) | 277, 354, 672 |
| NmuCI | GTSAC | 1 cut(s) | 1162 |
| NspI | RCATGY | 3 cut(s) | 39, 599, 693 |
| PaeI | GCATGC | 1 cut(s) | 693 |
| PceI | AGGCCT | 1 cut(s) | 557 |
| PciI | ACATGT | 1 cut(s) | 35 |
| PctI | GAATGC | 3 cut(s) | 92, 380, 1399 |
| PdmI | GAANNNNTTC | 1 cut(s) | 732 |
| PfeI | GAWTC | 2 cut(s) | 851, 965 |
| PflFI | GACNNNGTC | 1 cut(s) | 944 |
| PfoI | TCCNGGA | 1 cut(s) | 355 |
| PkrI | GCNGC | 5 cut(s) | 379, 1249, 1298, 1399, 1448 |
| PleI | GAGTC | 2 cut(s) | 467, 1265 |
| PpsI | GAGTC | 2 cut(s) | 467, 1265 |
| PpuMI | RGGWCCY | 1 cut(s) | 353 |
| PscI | ACATGT | 1 cut(s) | 35 |
| PsiI | TTATAA | 1 cut(s) | 1065 |
| Psp124BI | GAGCTC | 1 cut(s) | 477 |
| Psp5II | RGGWCCY | 1 cut(s) | 353 |
| Psp6I | CCWGG | 3 cut(s) | 4, 355, 1031 |
| PspFI | CCCAGC | 1 cut(s) | 1080 |
| PspGI | CCWGG | 3 cut(s) | 4, 355, 1031 |
| PspN4I | GGNNCC | 3 cut(s) | 277, 354, 672 |
| PspPI | GGNCC | 5 cut(s) | 162, 276, 353, 621, 1499 |
| PspPPI | RGGWCCY | 1 cut(s) | 353 |
| PsyI | GACNNNGTC | 1 cut(s) | 944 |
| PvuII | CAGCTG | 1 cut(s) | 1268 |
| RsaI | GTAC | 1 cut(s) | 570 |
| RsaNI | GTAC | 1 cut(s) | 569 |
| RseI | CAYNNNNRTG | 1 cut(s) | 600 |
| SacI | GAGCTC | 1 cut(s) | 477 |
| SatI | GCNGC | 5 cut(s) | 378, 1248, 1297, 1398, 1447 |
| Sau3AI | GATC | 3 cut(s) | 208, 901, 1147 |
| Sau96I | GGNCC | 5 cut(s) | 162, 276, 353, 621, 1499 |
| ScaI | AGTACT | 1 cut(s) | 570 |
| SchI | GAGTC | 2 cut(s) | 468, 1265 |
| ScrFI | CCNGG | 4 cut(s) | 6, 89, 357, 1033 |
| SduI | GDGCHC | 1 cut(s) | 477 |
| SfaNI | GCATC | 2 cut(s) | 301, 1332 |
| SinI | GGWCC | 3 cut(s) | 162, 276, 353 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 600 |
| SmlI | CTYRAG | 1 cut(s) | 606 |
| SmoI | CTYRAG | 1 cut(s) | 606 |
| SpeI | ACTAGT | 1 cut(s) | 364 |
| SphI | GCATGC | 1 cut(s) | 693 |
| SseBI | AGGCCT | 1 cut(s) | 557 |
| SsiI | CCGC | 3 cut(s) | 190, 1384, 1400 |
| SspMI | CTAG | 3 cut(s) | 204, 365, 518 |
| SstI | GAGCTC | 1 cut(s) | 477 |
| StuI | AGGCCT | 1 cut(s) | 557 |
| StyD4I | CCNGG | 4 cut(s) | 4, 87, 355, 1031 |
| StyI | CCWWGG | 3 cut(s) | 127, 165, 1334 |
| TaaI | ACNGT | 3 cut(s) | 122, 148, 568 |
| TaiI | ACGT | 2 cut(s) | 540, 1258 |
| TaqI | TCGA | 3 cut(s) | 309, 384, 954 |
| TatI | WGTACW | 1 cut(s) | 568 |
| TfiI | GAWTC | 2 cut(s) | 851, 965 |
| TscAI | CASTG | 7 cut(s) | 623, 819, 1120, 1150, 1311, 1354, 1386 |
| TseFI | GTSAC | 1 cut(s) | 1162 |
| TseI | GCWGC | 5 cut(s) | 377, 1247, 1296, 1397, 1446 |
| Tsp45I | GTSAC | 1 cut(s) | 1162 |
| TspDTI | ATGAA | 4 cut(s) | 725, 1081, 1099, 1525 |
| TspRI | CASTG | 7 cut(s) | 623, 819, 1120, 1150, 1311, 1354, 1386 |
| Tth111I | GACNNNGTC | 1 cut(s) | 944 |
| VpaK11BI | GGWCC | 3 cut(s) | 162, 276, 353 |
| XapI | RAATTY | 2 cut(s) | 238, 1005 |
| XbaI | TCTAGA | 1 cut(s) | 517 |
| XceI | RCATGY | 3 cut(s) | 39, 599, 693 |
| XmiI | GTMKAC | 1 cut(s) | 939 |
| XmnI | GAANNNNTTC | 1 cut(s) | 732 |
| XspI | CTAG | 3 cut(s) | 204, 365, 518 |
| ZrmI | AGTACT | 1 cut(s) | 570 |