MD04G1062900.v1.1

protein dimerization activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0014064
Physical Location & Seq
Reverse (-)
8288449 .. 8293424
4976 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1062900.v1.1.491

Sequence Viewer

Length: 1800 bp
ATGGGCGTGGTGAAGGCGTGGCGGTTCAGCTGGACTCCGGCGGCAGCGAAGCTGGCTCTGTTACAGCAGCACCACCAGAACGGCTTCAACAATGGCGGCGAGAAGAAGCACGTGCTGAGCTTGAGATCACCCGCCCCGGCCCCCGCCATCGCCATCGCCACCAAAATGACGCCGTCGCTGTCGCAGAAGGAGAGGAAGCAGACGGTGATGTCGTGGTCATGGTCGCTGGTGTGTGGGCTGATGCTGTTTGGGCTGGGCCTGATTTCGCTCTTCACCGGTCACGTGGCATCTGATCTCGAGTGGTACTCCCAGCGCTTGGTCATGAACACTTCATTAAGTTCATTCTACACAAAGCGGAAGGGAAATGGGCGTGAGGCAATTGATGTTTGGAAGTCCAGCTACTCGAAATTCTACTACGGGTGCAGTCAAAGAGGGCCTCGCTATGCTCCGGCTGTGAAAGAGCGATCATCCAACGGGTATTTGCTGATTGCAACAAGTGGGGGGTTGAACCAACAAAGAACAGGAATAACAGATGCAGTGGTAGTTGCCCGGATTCTTAATGCTACCTTAGTTGTACCCGAGCTGGATCATCATTCCTATTGGAAGGATGACAGTGACTTTATCCACATTTTTGATGTCGATTGGTTCATGTCTTATCTTGCAAAAGATGTCACGGTTGTCCGGAGAGTTCCTGAGAAAGTCATGCGGAGCATGGAAAAGCCTCCATATACCATGCGTGTGCCAAGGAAATCTGAACCTGAATATTATATTGAACAAGTTTTGCCTATACTCTTGAGGAGACGTGTTTTGCAATTGACGAAGTTTGATTATAGACTTTCAAGTAACCTTGACGATGAGCTGCAAAAGTTGCGTTGCCGTGTTAATTATCATGCACTTAAATTTACAAAATCTATACATGAACTCGGTCAGAAACTTGTTATGAGAATGCGAAAGATGGCAAAACGTTTCATTGCTGTTCACTTGAGGTTTGAACCTGATATGCTAGCATTTTCTGGGTGTTATTATGGCGGGGGTGATAAAGAGAGAGATGAGTTTGCTGAAATAAGGAAACGATGGGCGACATTACCTGATTTAAGCGCCGAGGAAGAGCGAAAGCGAGGAAAATGTCCACTGACTCCGTATGAAGTGGGTTTGATGCTGCGTGCACTTGGTTTTGCAAATGACACGTATCTCTACGTTGCTTCTGGAGAAATATATGGTGGGGAAGAGACTTTGAGACCTCTAAGAGAGCTCTTCCCAAATTTTTACACAAAGGAGATGCTTGCTAGTGAGGAGCTGAAACCTTTTCTTCCATTCTCCTCCCGTCTTGCTGCAATTGACTACATTGTCTCTGACGAAAGTGATGTATTTGTCACTAATAATAACGGGAATATGGCCAAAATTCTCGCAGGTCGAAGGAGGTATATGGGTCACAAGAGGACCATCAGGCCAAATGCTAAGAGGCTCAGTGCTTTGTTCATGGCTAGGCATCAGATGAATTGGGAAACATTTTCAAAAAAAGTAAAGTCATGCCAAAAAGGATTCATGGGTGACCCTGACGAGGTGAAACCTGGTCGGGGTGAATTCCATGAATTTCCACAGGCTTGCATCTGCCAGAAACCATTCAAAGATAATGAAAAGAGCAATGACAGAGATCATCACTCAGCAGGAAAAACCAAAAGTACATATAATGTAGAGAAACCAGGTGAGAAGGCTTTACAAATATCAATCAAGAGGAACATGGGAAAAGAGCGTTTATCCTCAGGAGATGACGAAAAGGATGAAGTTTTCCCAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4413 Dimer_Tnp_hAT

Protein Analysis

600

Amino Acids

68.74

Weight (kDa)

9.51

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 160 - 476 1.3e-103 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014064)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16650 AT4G16650
fragaria_vesca FvH4_5g19080 FvH4_5g19080 FvH4_5g19080
malus_domestica MD04G1062900.v1.1 MD06G1057200.v1.1
prunus_persica Prupe.5G068100_v2.0.a1
pyrus_communis pycom04g05660 pycom06g04800
rosa_chinensis RchiOBHm_Chr7g0203531
rosa_laevigata RLG00000003522
rosa_multiflora Rmu_ssc0000362.1_g000007
rosa_roxburghii Rroxscaffold_3G00253730
rosa_rugosa Rorug07G0076700
rosa_samantha Rh7BG205900
rosa_wichuraiana Rw7G018010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 208, 1346
Acc36I ACCTGC 1 cut(s) 1400
AccB7I CCANNNNNTGG 1 cut(s) 316
AccIII TCCGGA 1 cut(s) 681
AciI CCGC 8 cut(s) 22, 41, 96, 132, 144, 355, 706, 1029
AclI AACGTT 1 cut(s) 964
AclWI GGATC 1 cut(s) 594
AcoI YGGCCR 1 cut(s) 1395
AcsI RAATTY 6 cut(s) 407, 899, 1261, 1401, 1583, 1592
AcvI CACGTG 2 cut(s) 112, 283
AcyI GRCGYC 1 cut(s) 170
AfaI GTAC 3 cut(s) 305, 576, 1684
AfeI AGCGCT 1 cut(s) 314
AfiI CCNNNNNNNGG 3 cut(s) 316, 1561, 1577
AflIII ACRYGT 2 cut(s) 802, 1185
AgeI ACCGGT 1 cut(s) 275
AgsI TTSAA 7 cut(s) 88, 508, 773, 840, 992, 1515, 1627
AjiI CACGTC 1 cut(s) 803
AjnI CCWGG 2 cut(s) 1570, 1702
AluBI AGCT 8 cut(s) 30, 52, 120, 399, 583, 859, 1252, 1297
AluI AGCT 8 cut(s) 30, 52, 120, 399, 583, 859, 1252, 1297
Alw21I GWGCWC 2 cut(s) 1168, 1254
Alw26I GTCTC 4 cut(s) 793, 1223, 1231, 1354
Alw44I GTGCAC 1 cut(s) 1164
AlwI GGATC 1 cut(s) 594
Ama87I CYCGRG 2 cut(s) 296, 578
Aor13HI TCCGGA 1 cut(s) 681
Aor51HI AGCGCT 1 cut(s) 314
AoxI GGCC 5 cut(s) 138, 256, 434, 1395, 1448
ApaLI GTGCAC 1 cut(s) 1164
ApeKI GCWGC 5 cut(s) 44, 67, 859, 1159, 1331
ApoI RAATTY 6 cut(s) 407, 899, 1261, 1401, 1583, 1592
AsiGI ACCGGT 1 cut(s) 275
Asp700I GAANNNNTTC 2 cut(s) 83, 1622
AspLEI GCGC 2 cut(s) 315, 1100
AspS9I GGNCC 4 cut(s) 139, 256, 434, 1440
AsuC2I CCSGG 2 cut(s) 137, 550
AsuHPI GGTGA 9 cut(s) 22, 120, 217, 265, 1046, 1562, 1576, 1592, 1718
AsuNHI GCTAGC 1 cut(s) 1003
AvaI CYCGRG 2 cut(s) 296, 578
AvaII GGWCC 1 cut(s) 1440
AxyI CCTNAGG 1 cut(s) 1762
BaeGI GKGCMC 1 cut(s) 1168
BalI TGGCCA 1 cut(s) 1397
BanII GRGCYC 1 cut(s) 1254
BarI GAAGNNNNNNTAC 2 cut(s) 383, 415
BbrPI CACGTG 2 cut(s) 112, 283
Bbv12I GWGCWC 2 cut(s) 1168, 1254
BbvI GCAGC 5 cut(s) 56, 79, 846, 1146, 1318
BccI CCATC 5 cut(s) 155, 161, 949, 1068, 1451
BceAI ACGGC 3 cut(s) 97, 157, 861
BciT130I CCWGG 2 cut(s) 1572, 1704
BcnI CCSGG 2 cut(s) 137, 550
BcoDI GTCTC 4 cut(s) 793, 1223, 1231, 1354
BfaI CTAG 4 cut(s) 1004, 1287, 1485, 1798
BfoI RGCGCY 2 cut(s) 316, 1101
BfuAI ACCTGC 1 cut(s) 1400
BisI GCNGC 7 cut(s) 42, 45, 68, 97, 860, 1160, 1332
BlpI GCTNAGC 1 cut(s) 116
BlsI GCNGC 7 cut(s) 43, 46, 69, 98, 861, 1161, 1333
Bme1390I CCNGG 4 cut(s) 137, 550, 1572, 1704
Bme18I GGWCC 1 cut(s) 1440
BmeT110I CYCGRG 2 cut(s) 296, 578
BmgBI CACGTC 1 cut(s) 803
BmgT120I GGNCC 4 cut(s) 139, 256, 434, 1440
BmiI GGNNCC 1 cut(s) 141
BmrFI CCNGG 4 cut(s) 137, 550, 1572, 1704
BmsI GCATC 7 cut(s) 231, 296, 523, 1146, 1269, 1498, 1617
BmtI GCTAGC 1 cut(s) 1007
BplI GAGNNNNNCTC 2 cut(s) 290, 322
BpmI CTGGAG 1 cut(s) 1227
Bpu1102I GCTNAGC 1 cut(s) 116
BpuEI CTTGAG 3 cut(s) 142, 814, 1003
BpuMI CCSGG 2 cut(s) 137, 550
BsaAI YACGTR 3 cut(s) 112, 283, 1188
BsaHI GRCGYC 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 1231
BsaJI CCNNGG 3 cut(s) 135, 743, 1101
BsaWI WCCGGW 2 cut(s) 275, 681
Bsc4I CCNNNNNNNGG 3 cut(s) 316, 1561, 1577
Bse118I RCCGGY 1 cut(s) 275
Bse21I CCTNAGG 1 cut(s) 1762
Bse3DI GCAATG 2 cut(s) 969, 1651
BseAI TCCGGA 1 cut(s) 681
BseBI CCWGG 2 cut(s) 1572, 1704
BseDI CCNNGG 3 cut(s) 135, 743, 1101
BseGI GGATG 3 cut(s) 467, 613, 1786
BseLI CCNNNNNNNGG 3 cut(s) 316, 1561, 1577
BseMI GCAATG 2 cut(s) 969, 1651
BseMII CTCAG 5 cut(s) 107, 684, 1480, 1677, 1776
BseRI GAGGAG 3 cut(s) 811, 1307, 1309
BseSI GKGCMC 1 cut(s) 1168
BseXI GCAGC 5 cut(s) 56, 79, 846, 1146, 1318
BseYI CCCAGC 2 cut(s) 253, 309
BsgI GTGCAG 1 cut(s) 442
BshFI GGCC 5 cut(s) 140, 258, 436, 1397, 1450
BshTI ACCGGT 1 cut(s) 275
BsiHKAI GWGCWC 2 cut(s) 1168, 1254
BsiHKCI CYCGRG 2 cut(s) 296, 578
BsiSI CCGG 6 cut(s) 38, 137, 276, 449, 550, 682
BslI CCNNNNNNNGG 3 cut(s) 316, 1561, 1577
BsmAI GTCTC 4 cut(s) 793, 1223, 1231, 1354
BsmBI CGTCTC 1 cut(s) 793
BsmI GAATGC 1 cut(s) 951
BsnI GGCC 5 cut(s) 140, 258, 436, 1397, 1450
Bso31I GGTCTC 1 cut(s) 1231
BsoBI CYCGRG 2 cut(s) 296, 578
Bsp1286I GDGCHC 2 cut(s) 1168, 1254
Bsp13I TCCGGA 1 cut(s) 681
Bsp143I GATC 5 cut(s) 125, 292, 464, 586, 1654
Bsp1720I GCTNAGC 1 cut(s) 116
BspACI CCGC 8 cut(s) 22, 41, 96, 132, 144, 355, 706, 1029
BspANI GGCC 5 cut(s) 140, 258, 436, 1397, 1450
BspCNI CTCAG 5 cut(s) 108, 685, 1479, 1676, 1775
BspEI TCCGGA 1 cut(s) 681
BspHI TCATGA 1 cut(s) 321
BspLI GGNNCC 1 cut(s) 141
BspMI ACCTGC 1 cut(s) 1400
BspOI GCTAGC 1 cut(s) 1007
BspPI GGATC 1 cut(s) 594
BspQI GCTCTTC 3 cut(s) 275, 1101, 1259
BspTNI GGTCTC 1 cut(s) 1231
BsrDI GCAATG 2 cut(s) 969, 1651
BsrFI RCCGGY 1 cut(s) 275
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 3 cut(s) 135, 743, 1101
BssMI GATC 5 cut(s) 125, 292, 464, 586, 1654
BssNI GRCGYC 1 cut(s) 170
BssT1I CCWWGG 1 cut(s) 743
Bst2UI CCWGG 2 cut(s) 1572, 1704
Bst4CI ACNGT 3 cut(s) 205, 614, 676
Bst6I CTCTTC 4 cut(s) 275, 1101, 1221, 1259
BstACI GRCGYC 1 cut(s) 170
BstAPI GCANNNNNTGC 1 cut(s) 868
BstBAI YACGTR 3 cut(s) 112, 283, 1188
BstC8I GCNNGC 5 cut(s) 54, 1005, 1164, 1284, 1606
BstDEI CTNAG 8 cut(s) 116, 568, 693, 1244, 1458, 1466, 1663, 1762
BstEII GGTNACC 1 cut(s) 1550
BstF5I GGATG 3 cut(s) 467, 613, 1786
BstH2I RGCGCY 2 cut(s) 316, 1101
BstHHI GCGC 2 cut(s) 315, 1100
BstKTI GATC 5 cut(s) 128, 295, 467, 589, 1657
BstMAI GTCTC 4 cut(s) 793, 1223, 1231, 1354
BstMBI GATC 5 cut(s) 125, 292, 464, 586, 1654
BstMWI GCNNNNNNNGC 3 cut(s) 53, 250, 868
BstNI CCWGG 2 cut(s) 1572, 1704
BstPI GGTNACC 1 cut(s) 1550
BstSCI CCNGG 4 cut(s) 135, 548, 1570, 1702
BstSLI GKGCMC 1 cut(s) 1168
BstV1I GCAGC 5 cut(s) 56, 79, 846, 1146, 1318
Bsu36I CCTNAGG 1 cut(s) 1762
BsuRI GGCC 5 cut(s) 140, 258, 436, 1397, 1450
BtgZI GCGATG 2 cut(s) 133, 139
BtrI CACGTC 1 cut(s) 803
BtsCI GGATG 3 cut(s) 467, 613, 1786
BtsI GCAGTG 1 cut(s) 543
BtsIMutI CAGTG 4 cut(s) 543, 619, 1130, 1474
BveI ACCTGC 1 cut(s) 1400
Cac8I GCNNGC 5 cut(s) 54, 1005, 1164, 1284, 1606
CciI TCATGA 1 cut(s) 321
CfoI GCGC 2 cut(s) 315, 1100
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 4 cut(s) 139, 256, 434, 1440
CseI GACGC 1 cut(s) 178
CsiI ACCWGGT 2 cut(s) 1570, 1702
Csp6I GTAC 3 cut(s) 304, 575, 1683
CspAI ACCGGT 1 cut(s) 275
CviQI GTAC 3 cut(s) 304, 575, 1683
DdeI CTNAG 8 cut(s) 116, 568, 693, 1244, 1458, 1466, 1663, 1762
DpnI GATC 5 cut(s) 127, 294, 466, 588, 1656
DpnII GATC 5 cut(s) 125, 292, 464, 586, 1654
DrdI GACNNNNNNGTC 2 cut(s) 208, 1346
DseDI GACNNNNNNGTC 2 cut(s) 208, 1346
EaeI YGGCCR 1 cut(s) 1395
Eam1104I CTCTTC 4 cut(s) 275, 1101, 1221, 1259
EarI CTCTTC 4 cut(s) 275, 1101, 1221, 1259
Ecl136II GAGCTC 1 cut(s) 1252
Eco130I CCWWGG 1 cut(s) 743
Eco24I GRGCYC 1 cut(s) 1254
Eco31I GGTCTC 1 cut(s) 1231
Eco47I GGWCC 1 cut(s) 1440
Eco47III AGCGCT 1 cut(s) 314
Eco53kI GAGCTC 1 cut(s) 1252
Eco72I CACGTG 2 cut(s) 112, 283
Eco81I CCTNAGG 1 cut(s) 1762
Eco88I CYCGRG 2 cut(s) 296, 578
Eco91I GGTNACC 1 cut(s) 1550
EcoICRI GAGCTC 1 cut(s) 1252
EcoO109I RGGNCCY 1 cut(s) 434
EcoO65I GGTNACC 1 cut(s) 1550
EcoRI GAATTC 1 cut(s) 1583
EcoRII CCWGG 2 cut(s) 1570, 1702
EcoT14I CCWWGG 1 cut(s) 743
EcoT38I GRGCYC 1 cut(s) 1254
ErhI CCWWGG 1 cut(s) 743
Esp3I CGTCTC 1 cut(s) 793
FauI CCCGC 3 cut(s) 139, 151, 1022
Fnu4HI GCNGC 7 cut(s) 42, 45, 68, 97, 860, 1160, 1332
FokI GGATG 3 cut(s) 454, 620, 1793
FriOI GRGCYC 1 cut(s) 1254
Fsp4HI GCNGC 7 cut(s) 42, 45, 68, 97, 860, 1160, 1332
FspBI CTAG 4 cut(s) 1004, 1287, 1485, 1798
GlaI GCGC 2 cut(s) 314, 1099
GluI GCNGC 7 cut(s) 42, 45, 68, 97, 860, 1160, 1332
GsaI CCCAGC 2 cut(s) 257, 313
GsuI CTGGAG 1 cut(s) 1227
HaeII RGCGCY 2 cut(s) 316, 1101
HaeIII GGCC 5 cut(s) 140, 258, 436, 1397, 1450
HapII CCGG 6 cut(s) 38, 137, 276, 449, 550, 682
HgaI GACGC 1 cut(s) 178
HhaI GCGC 2 cut(s) 315, 1100
Hin1I GRCGYC 1 cut(s) 170
Hin6I GCGC 2 cut(s) 313, 1098
HinP1I GCGC 2 cut(s) 313, 1098
HinfI GANTC 4 cut(s) 34, 553, 1135, 1542
HpaII CCGG 6 cut(s) 38, 137, 276, 449, 550, 682
HphI GGTGA 9 cut(s) 22, 120, 217, 265, 1046, 1562, 1576, 1592, 1718
Hpy166II GTNNAC 3 cut(s) 979, 1130, 1166
Hpy188I TCNGA 5 cut(s) 292, 754, 930, 1354, 1494
Hpy188III TCNNGA 8 cut(s) 296, 322, 682, 692, 793, 1206, 1732, 1764
Hpy8I GTNNAC 3 cut(s) 979, 1130, 1166
Hpy99I CGWCG 1 cut(s) 178
HpyAV CCTTC 6 cut(s) 7, 181, 352, 598, 1410, 1705
HpyCH4III ACNGT 3 cut(s) 205, 614, 676
HpyCH4IV ACGT 6 cut(s) 111, 282, 802, 964, 1187, 1197
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 250, 868
HpyF3I CTNAG 8 cut(s) 116, 568, 693, 1244, 1458, 1466, 1663, 1762
HpySE526I ACGT 6 cut(s) 111, 282, 802, 964, 1187, 1197
Hsp92I GRCGYC 1 cut(s) 170
HspAI GCGC 2 cut(s) 313, 1098
Kpn2I TCCGGA 1 cut(s) 681
Kzo9I GATC 5 cut(s) 125, 292, 464, 586, 1654
LguI GCTCTTC 3 cut(s) 275, 1101, 1259
LmnI GCTCC 3 cut(s) 451, 708, 1294
Lsp1109I GCAGC 5 cut(s) 56, 79, 846, 1146, 1318
LweI GCATC 7 cut(s) 231, 296, 523, 1146, 1269, 1498, 1617
MabI ACCWGGT 2 cut(s) 1570, 1702
MaeI CTAG 4 cut(s) 1004, 1287, 1485, 1798
MaeII ACGT 6 cut(s) 111, 282, 802, 964, 1187, 1197
MaeIII GTNAC 8 cut(s) 60, 278, 614, 670, 842, 1372, 1430, 1550
MalI GATC 5 cut(s) 127, 294, 466, 588, 1656
MboI GATC 5 cut(s) 125, 292, 464, 586, 1654
MboII GAAGA 6 cut(s) 115, 262, 1118, 1238, 1246, 1301
MfeI CAATTG 3 cut(s) 378, 812, 1335
MhlI GDGCHC 2 cut(s) 1168, 1254
MlsI TGGCCA 1 cut(s) 1397
MluNI TGGCCA 1 cut(s) 1397
MlyI GAGTC 2 cut(s) 28, 1129
MmeI TCCRAC 1 cut(s) 495
Mox20I TGGCCA 1 cut(s) 1397
MroI TCCGGA 1 cut(s) 681
MroXI GAANNNNTTC 2 cut(s) 83, 1622
MscI TGGCCA 1 cut(s) 1397
MseI TTAA 5 cut(s) 335, 558, 882, 897, 1094
MslI CAYNNNNRTG 2 cut(s) 164, 737
Msp20I TGGCCA 1 cut(s) 1397
MspA1I CMGCKG 1 cut(s) 30
MspI CCGG 6 cut(s) 38, 137, 276, 449, 550, 682
MspR9I CCNGG 4 cut(s) 137, 550, 1572, 1704
MunI CAATTG 3 cut(s) 378, 812, 1335
Mva1269I GAATGC 1 cut(s) 951
MvaI CCWGG 2 cut(s) 1572, 1704
MwoI GCNNNNNNNGC 3 cut(s) 53, 250, 868
NciI CCSGG 2 cut(s) 137, 550
NdeII GATC 5 cut(s) 125, 292, 464, 586, 1654
NheI GCTAGC 1 cut(s) 1003
NlaIV GGNNCC 1 cut(s) 141
NmeAIII GCCGAG 1 cut(s) 1126
NmuCI GTSAC 6 cut(s) 278, 614, 670, 1372, 1430, 1550
PaeR7I CTCGAG 1 cut(s) 296
PagI TCATGA 1 cut(s) 321
PciSI GCTCTTC 3 cut(s) 275, 1101, 1259
PcsI WCGNNNNNNNCGW 1 cut(s) 209
PctI GAATGC 1 cut(s) 951
PdmI GAANNNNTTC 2 cut(s) 83, 1622
PfeI GAWTC 2 cut(s) 553, 1542
PflFI GACNNNGTC 1 cut(s) 172
PflMI CCANNNNNTGG 1 cut(s) 316
PinAI ACCGGT 1 cut(s) 275
PkrI GCNGC 7 cut(s) 43, 46, 69, 98, 861, 1161, 1333
PleI GAGTC 2 cut(s) 28, 1129
PmaCI CACGTG 2 cut(s) 112, 283
PmlI CACGTG 2 cut(s) 112, 283
PpsI GAGTC 2 cut(s) 28, 1129
Ppu21I YACGTR 3 cut(s) 112, 283, 1188
Psp124BI GAGCTC 1 cut(s) 1254
Psp1406I AACGTT 1 cut(s) 964
Psp6I CCWGG 2 cut(s) 1570, 1702
PspCI CACGTG 2 cut(s) 112, 283
PspEI GGTNACC 1 cut(s) 1550
PspFI CCCAGC 2 cut(s) 253, 309
PspGI CCWGG 2 cut(s) 1570, 1702
PspN4I GGNNCC 1 cut(s) 141
PspPI GGNCC 4 cut(s) 139, 256, 434, 1440
PsyI GACNNNGTC 1 cut(s) 172
PvuII CAGCTG 1 cut(s) 30
RsaI GTAC 3 cut(s) 305, 576, 1684
RsaNI GTAC 3 cut(s) 304, 575, 1683
RseI CAYNNNNRTG 2 cut(s) 164, 737
SacI GAGCTC 1 cut(s) 1254
SapI GCTCTTC 3 cut(s) 275, 1101, 1259
SaqAI TTAA 5 cut(s) 335, 558, 882, 897, 1094
SatI GCNGC 7 cut(s) 42, 45, 68, 97, 860, 1160, 1332
Sau3AI GATC 5 cut(s) 125, 292, 464, 586, 1654
Sau96I GGNCC 4 cut(s) 139, 256, 434, 1440
SchI GAGTC 2 cut(s) 28, 1129
ScrFI CCNGG 4 cut(s) 137, 550, 1572, 1704
SduI GDGCHC 2 cut(s) 1168, 1254
SexAI ACCWGGT 2 cut(s) 1570, 1702
SfaNI GCATC 7 cut(s) 231, 296, 523, 1146, 1269, 1498, 1617
Sfr274I CTCGAG 1 cut(s) 296
SinI GGWCC 1 cut(s) 1440
SlaI CTCGAG 1 cut(s) 296
SmiMI CAYNNNNRTG 2 cut(s) 164, 737
SmlI CTYRAG 4 cut(s) 121, 296, 793, 982
SmoI CTYRAG 4 cut(s) 121, 296, 793, 982
SsiI CCGC 8 cut(s) 22, 41, 96, 132, 144, 355, 706, 1029
SspI AATATT 1 cut(s) 764
SspMI CTAG 4 cut(s) 1004, 1287, 1485, 1798
SstI GAGCTC 1 cut(s) 1254
StyD4I CCNGG 4 cut(s) 135, 548, 1570, 1702
StyI CCWWGG 1 cut(s) 743
TaaI ACNGT 3 cut(s) 205, 614, 676
TaiI ACGT 6 cut(s) 114, 285, 805, 967, 1190, 1200
TaqI TCGA 4 cut(s) 297, 404, 639, 1414
TaqII GACCGA 1 cut(s) 914
TatI WGTACW 1 cut(s) 1682
TauI GCSGC 2 cut(s) 44, 99
TfiI GAWTC 2 cut(s) 553, 1542
Tru1I TTAA 5 cut(s) 335, 558, 882, 897, 1094
Tru9I TTAA 5 cut(s) 335, 558, 882, 897, 1094
TscAI CASTG 4 cut(s) 543, 619, 1137, 1474
TseFI GTSAC 6 cut(s) 278, 614, 670, 1372, 1430, 1550
TseI GCWGC 5 cut(s) 44, 67, 859, 1159, 1331
Tsp45I GTSAC 6 cut(s) 278, 614, 670, 1372, 1430, 1550
TspGWI ACGGA 1 cut(s) 1128
TspRI CASTG 4 cut(s) 543, 619, 1137, 1474
Tth111I GACNNNGTC 1 cut(s) 172
Van91I CCANNNNNTGG 1 cut(s) 316
VneI GTGCAC 1 cut(s) 1164
VpaK11BI GGWCC 1 cut(s) 1440
XapI RAATTY 6 cut(s) 407, 899, 1261, 1401, 1583, 1592
XhoI CTCGAG 1 cut(s) 296
XmnI GAANNNNTTC 2 cut(s) 83, 1622
XspI CTAG 4 cut(s) 1004, 1287, 1485, 1798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.