Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0011697

Physical Location & Seq

Genomic Coordinates Reverse (-)

12182835 .. 12187506

Gene Structure 4672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1083900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGCTTCCCTGAGCTTTTTGACTGTGCTTCTCATCCACATTTGCTTGTTTGTGAGCTTTTCTTCTGCTGAGGATCCAAATGTTTTCTACCAATTTGAGGTCTCTTACATCACTGCTTCTCCTCTGGGTGTACCTCAACAGGTTATTGCCATAAATGGAAAGTTTCCAGGTCCTACTATTAACGCCACTACTAATAACAATGTCATTGTCAATGTTCGGAACAAATTGGATGAGAATCTCCTCATGACCTGGGCCGGAATTCAGCAACGGCGTAGTTCATGGCAAGATGGGGTTCTAGGAACCAACTGTCCAATTCCGCCAAAGTGGAATTGGACTTATAATTTTCAGGTTAAGGATCAGATTGGGAGCTTCTTTTACTTCCCGTCCCTTAATATGCAGAGAGCGTCTGGAGGATTTGGTGGCTTTATTATTAATAACCGGGCTGTAATTTCTATTCCTTTTGCAACCCCAGATGGGGATATAACTATCTTGATTGGTGACTGGTACACAAAGAACCATACGGCTTTGAGGAAGATGCTTGATGATGGGAAAGACCTTGGGATGCCCGATGGCGTTCTTATCAATGGAAAAGGCCCTTACCAATACAACACTACACTTGTTCCTGATGGCATTGATTACGAAACACTTGAAGTACACCCAGGCAAAACTTACCGTCTTCGCGTACACAATGTCGGGGTCTCAACTACTCTAAATTTCAGGATCCAGAACCATAATCTGCTTCTAGCAGAGTCAGAAGGATCATATACAGTGCAACAGAATTATACAAGCTTAGATATACACGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTTCTGATTATTACATTGTCGCGAGTGCTAGATTTGTCAACGAGTCAAACTGGAAACGAGTTACTGGAGTTGGAATCCTGCACTATACTAATTCCAAAGGAAAGGCAGCTGGCCCCCTTCCAGCGGGACCACAAGATGAATTTGACAAAACTTACTCAATGAACCAGGCAAGATCTATCAGATGGAATGTTTCAGCTAGTGGTGCACGTCCAAATCCACAGGGGTCTTTTAGATATGGATCAATCAATGTTACTGATGTTTATGTGTTGAAAAATAAGCCACCTGTAATGATTAATGGGAAACGGCGAACAACGCTCAGTGGAATCTCATTTAAAAATCCTTCCACACCAATCAGGCTTGCTGATTGGTTCAAAGTGAAGAATGCTTATAAGCTTGACTTCCCTGCGAGGCCACTTACAGGAACACCTAAACTGGAAACTTCTGTTATTAATACAACATTTAGAGGATTTATAGAAATCATACTGCAGAACAATGACACCAAGATGCAGAGCTACCACGTGGATGGATATGCATTCTTTGTTGTGGGGATGGACTACGGTGAGTGGACAGAGAATAGCAGGGGTACATATAACAAATGGGATGGAATAGCCCGGTCCACAGTACAGGTTTATCCTGGGGCATGGTCAGCCATCTTGATATCTCTTGACAATGTTGGAATCTGGAACATTAGAGCTGAAAACCTTGACTCGTGGTATCTTGGCCAAGAAACTTATATGAGGGTTGTCAACCCAGAAGCAAATAACAAAACTGAGCTGCCCATACCAGACAATGCTCTATATTGCGGTGCCCTCAACAAATTGCAAAAGCCGCAAGATATCTCTTCTGCAACGTCAATCACCACCAATGGATCAAAGTTGTTCTTTGCACTGCTGATGATCATCTACACCTTCGTTCCCTTATTCCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016491 GO:0016722 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0048046 GO:0048589 GO:0048856 GO:0048869 GO:0055044 GO:0055114 GO:0060560 GO:0071840 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

592

Amino Acids

66.08

Weight (kDa)

8.75

Isoelectric Point (pI)

33.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 147	4.7e-43	Multicopper oxidase
Cu-oxidase	PF00394	160 - 313	1.8e-46	Multicopper oxidase
Cu-oxidase_2	PF07731	399 - 534	2.8e-29	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12420 AT4G12420
fragaria_vesca	FvH4_5g00300
malus_domestica	MD04G1083900.v1.1 MD06G1066000.v1.1
prunus_persica	Prupe.5G075700_v2.0.a1
pyrus_communis	pycom04g07510 pycom06g05920
rosa_chinensis	RchiOBHm_Chr7g0202271
rosa_laevigata	RLG00000003613
rosa_multiflora	Rmu_co8242337.1_g000001 Rmu_sc0001394.1_g000006
rosa_roxburghii	Rroxscaffold_3G00254690
rosa_rugosa	Rorug07G0069700
rosa_samantha	Rh7AG196800 Rh7BG198000 Rh7CG208000 Rh7DG203400
rosa_wichuraiana	Rw7G017230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	339, 1236
AccB1I	GGYRCC	1 cut(s)	1652
AccII	CGCG	2 cut(s)	681, 869
AciI	CCGC	4 cut(s)	317, 971, 1650, 1676
AclWI	GGATC	9 cut(s)	68, 81, 363, 715, 728, 766, 843, 1093, 1723
AcoI	YGGCCR	1 cut(s)	1567
AcsI	RAATTY	3 cut(s)	258, 712, 986
AcvI	CACGTG	1 cut(s)	1366
AfaI	GTAC	6 cut(s)	132, 506, 654, 684, 1432, 1470
AfiI	CCNNNNNNNGG	5 cut(s)	97, 474, 475, 970, 1265
AflIII	ACRYGT	1 cut(s)	799
AgsI	TTSAA	3 cut(s)	650, 1117, 1219
AjiI	CACGTC	1 cut(s)	1055
AjnI	CCWGG	5 cut(s)	166, 248, 658, 1011, 1480
AloI	GAACNNNNNNTCC	2 cut(s)	292, 324
Alw21I	GWGCWC	1 cut(s)	1054
Alw26I	GTCTC	2 cut(s)	106, 703
Alw44I	GTGCAC	1 cut(s)	1050
AlwI	GGATC	9 cut(s)	68, 81, 363, 715, 728, 766, 843, 1093, 1723
AoxI	GGCC	5 cut(s)	252, 592, 958, 1256, 1567
ApaLI	GTGCAC	1 cut(s)	1050
ApeKI	GCWGC	2 cut(s)	953, 1621
ApoI	RAATTY	3 cut(s)	258, 712, 986
AseI	ATTAAT	3 cut(s)	432, 1140, 1296
AspS9I	GGNCC	6 cut(s)	170, 252, 593, 959, 974, 1461
AsuC2I	CCSGG	2 cut(s)	440, 1459
AsuHPI	GGTGA	3 cut(s)	509, 1418, 1696
AvaII	GGWCC	3 cut(s)	170, 974, 1461
BaeGI	GKGCMC	2 cut(s)	1054, 1657
BalI	TGGCCA	1 cut(s)	1569
BamHI	GGATCC	2 cut(s)	73, 720
BanI	GGYRCC	1 cut(s)	1652
BauI	CACGAG	1 cut(s)	1555
BbrPI	CACGTG	1 cut(s)	1366
BbsI	GAAGAC	1 cut(s)	668
Bbv12I	GWGCWC	1 cut(s)	1054
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	2 cut(s)	965, 1608
BceAI	ACGGC	3 cut(s)	284, 537, 1166
BciT130I	CCWGG	5 cut(s)	168, 250, 660, 1013, 1482
BclI	TGATCA	1 cut(s)	1743
BcnI	CCSGG	2 cut(s)	440, 1459
BcoDI	GTCTC	2 cut(s)	106, 703
BfaI	CTAG	4 cut(s)	296, 743, 876, 1044
BfmI	CTRYAG	1 cut(s)	1331
BglII	AGATCT	1 cut(s)	1019
BisI	GCNGC	3 cut(s)	954, 1622, 1676
BlsI	GCNGC	3 cut(s)	955, 1623, 1677
Bme1390I	CCNGG	7 cut(s)	168, 250, 440, 660, 1013, 1459, 1482
Bme18I	GGWCC	3 cut(s)	170, 974, 1461
BmgBI	CACGTC	1 cut(s)	1055
BmgT120I	GGNCC	6 cut(s)	170, 252, 593, 959, 974, 1461
BmiI	GGNNCC	6 cut(s)	75, 301, 722, 961, 975, 1654
BmrFI	CCNGG	7 cut(s)	168, 250, 440, 660, 1013, 1459, 1482
BmsI	GCATC	3 cut(s)	525, 552, 1341
BpiI	GAAGAC	1 cut(s)	668
BpmI	CTGGAG	2 cut(s)	429, 933
Bpu10I	CCTNAGC	2 cut(s)	11, 69
BpuMI	CCSGG	2 cut(s)	440, 1459
BsaAI	YACGTR	1 cut(s)	1366
BsaBI	GATNNNNATC	3 cut(s)	234, 1084, 1745
BsaI	GGTCTC	2 cut(s)	106, 703
BsaJI	CCNNGG	5 cut(s)	249, 556, 658, 831, 1481
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	5 cut(s)	97, 474, 475, 970, 1265
Bse1I	ACTGG	4 cut(s)	506, 902, 916, 1284
Bse8I	GATNNNNATC	3 cut(s)	234, 1084, 1745
BseBI	CCWGG	5 cut(s)	168, 250, 660, 1013, 1482
BseDI	CCNNGG	5 cut(s)	249, 556, 658, 831, 1481
BseGI	GGATG	6 cut(s)	33, 235, 567, 1375, 1401, 1453
BseJI	GATNNNNATC	3 cut(s)	234, 1084, 1745
BseLI	CCNNNNNNNGG	5 cut(s)	97, 474, 475, 970, 1265
BseMII	CTCAG	3 cut(s)	60, 1177, 1608
BseNI	ACTGG	4 cut(s)	506, 902, 916, 1284
BseRI	GAGGAG	2 cut(s)	111, 230
BseSI	GKGCMC	2 cut(s)	1054, 1657
BseXI	GCAGC	2 cut(s)	965, 1608
BsgI	GTGCAG	1 cut(s)	911
Bsh1236I	CGCG	2 cut(s)	681, 869
BshFI	GGCC	5 cut(s)	254, 594, 960, 1258, 1569
BshNI	GGYRCC	1 cut(s)	1652
BsiHKAI	GWGCWC	1 cut(s)	1054
BsiSI	CCGG	3 cut(s)	255, 439, 1459
BslFI	GGGAC	2 cut(s)	370, 987
BslI	CCNNNNNNNGG	5 cut(s)	97, 474, 475, 970, 1265
BsmAI	GTCTC	2 cut(s)	106, 703
BsmFI	GGGAC	2 cut(s)	370, 987
BsmI	GAATGC	3 cut(s)	847, 1234, 1379
BsnI	GGCC	5 cut(s)	254, 594, 960, 1258, 1569
Bso31I	GGTCTC	2 cut(s)	106, 703
Bsp1286I	GDGCHC	2 cut(s)	1054, 1657
Bsp143I	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
Bsp19I	CCATGG	1 cut(s)	831
Bsp68I	TCGCGA	1 cut(s)	869
BspACI	CCGC	4 cut(s)	317, 971, 1650, 1676
BspANI	GGCC	5 cut(s)	254, 594, 960, 1258, 1569
BspCNI	CTCAG	3 cut(s)	61, 1176, 1609
BspFNI	CGCG	2 cut(s)	681, 869
BspHI	TCATGA	1 cut(s)	243
BspLI	GGNNCC	6 cut(s)	75, 301, 722, 961, 975, 1654
BspMAI	CTGCAG	1 cut(s)	1335
BspPI	GGATC	9 cut(s)	68, 81, 363, 715, 728, 766, 843, 1093, 1723
BspT107I	GGYRCC	1 cut(s)	1652
BspTNI	GGTCTC	2 cut(s)	106, 703
BsrI	ACTGG	4 cut(s)	506, 902, 916, 1284
BssECI	CCNNGG	5 cut(s)	249, 556, 658, 831, 1481
BssMI	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
BssSI	CACGAG	1 cut(s)	1555
BssT1I	CCWWGG	2 cut(s)	556, 831
Bst2BI	CACGAG	1 cut(s)	1555
Bst2UI	CCWGG	5 cut(s)	168, 250, 660, 1013, 1482
Bst4CI	ACNGT	6 cut(s)	25, 308, 674, 769, 1406, 1468
Bst6I	CTCTTC	1 cut(s)	1693
BstBAI	YACGTR	1 cut(s)	1366
BstC8I	GCNNGC	2 cut(s)	958, 1206
BstDEI	CTNAG	5 cut(s)	11, 69, 790, 1163, 1617
BstDSI	CCRYGG	1 cut(s)	831
BstEII	GGTNACC	1 cut(s)	826
BstF5I	GGATG	6 cut(s)	33, 235, 567, 1375, 1401, 1453
BstFNI	CGCG	2 cut(s)	681, 869
BstKTI	GATC	9 cut(s)	76, 358, 723, 761, 838, 1022, 1088, 1718, 1746
BstMAI	GTCTC	2 cut(s)	106, 703
BstMBI	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
BstMWI	GCNNNNNNNGC	4 cut(s)	1049, 1159, 1493, 1675
BstNI	CCWGG	5 cut(s)	168, 250, 660, 1013, 1482
BstPI	GGTNACC	1 cut(s)	826
BstSCI	CCNGG	7 cut(s)	166, 248, 438, 658, 1011, 1457, 1480
BstSFI	CTRYAG	1 cut(s)	1331
BstSLI	GKGCMC	2 cut(s)	1054, 1657
BstUI	CGCG	2 cut(s)	681, 869
BstV1I	GCAGC	2 cut(s)	965, 1608
BstV2I	GAAGAC	1 cut(s)	668
BstX2I	RGATCY	3 cut(s)	73, 720, 1019
BstXI	CCANNNNNNTGG	1 cut(s)	1370
BstYI	RGATCY	3 cut(s)	73, 720, 1019
BsuRI	GGCC	5 cut(s)	254, 594, 960, 1258, 1569
BtgI	CCRYGG	1 cut(s)	831
BtrI	CACGTC	1 cut(s)	1055
BtsCI	GGATG	6 cut(s)	33, 235, 567, 1375, 1401, 1453
BtsI	GCAGTG	2 cut(s)	111, 1733
BtsIMutI	CAGTG	4 cut(s)	111, 774, 1171, 1733
BtuMI	TCGCGA	1 cut(s)	869
Cac8I	GCNNGC	2 cut(s)	958, 1206
CciI	TCATGA	1 cut(s)	243
Cfr13I	GGNCC	6 cut(s)	170, 252, 593, 959, 974, 1461
CseI	GACGC	1 cut(s)	393
Csp6I	GTAC	6 cut(s)	131, 505, 653, 683, 1431, 1469
CviAII	CATG	4 cut(s)	244, 279, 832, 1488
CviQI	GTAC	6 cut(s)	131, 505, 653, 683, 1431, 1469
DdeI	CTNAG	5 cut(s)	11, 69, 790, 1163, 1617
DpnI	GATC	9 cut(s)	75, 357, 722, 760, 837, 1021, 1087, 1717, 1745
DpnII	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
DraI	TTTAAA	1 cut(s)	1180
EaeI	YGGCCR	1 cut(s)	1567
Eam1104I	CTCTTC	1 cut(s)	1693
EarI	CTCTTC	1 cut(s)	1693
EciI	GGCGGA	1 cut(s)	306
Eco130I	CCWWGG	2 cut(s)	556, 831
Eco31I	GGTCTC	2 cut(s)	106, 703
Eco32I	GATATC	2 cut(s)	1506, 1684
Eco47I	GGWCC	3 cut(s)	170, 974, 1461
Eco72I	CACGTG	1 cut(s)	1366
Eco91I	GGTNACC	1 cut(s)	826
EcoO109I	RGGNCCY	2 cut(s)	170, 593
EcoO65I	GGTNACC	1 cut(s)	826
EcoRI	GAATTC	1 cut(s)	258
EcoRII	CCWGG	5 cut(s)	166, 248, 658, 1011, 1480
EcoRV	GATATC	2 cut(s)	1506, 1684
EcoT14I	CCWWGG	2 cut(s)	556, 831
EcoT22I	ATGCAT	1 cut(s)	1381
ErhI	CCWWGG	2 cut(s)	556, 831
FaeI	CATG	4 cut(s)	247, 282, 835, 1491
FalI	AAGNNNNNCTT	4 cut(s)	1229, 1261, 1712, 1744
FaqI	GGGAC	2 cut(s)	370, 987
FatI	CATG	4 cut(s)	243, 278, 831, 1487
FauI	CCCGC	1 cut(s)	964
FbaI	TGATCA	1 cut(s)	1743
Fnu4HI	GCNGC	3 cut(s)	954, 1622, 1676
FokI	GGATG	6 cut(s)	20, 242, 574, 1382, 1408, 1460
Fsp4HI	GCNGC	3 cut(s)	954, 1622, 1676
FspBI	CTAG	4 cut(s)	296, 743, 876, 1044
GluI	GCNGC	3 cut(s)	954, 1622, 1676
GsuI	CTGGAG	2 cut(s)	429, 933
HaeIII	GGCC	5 cut(s)	254, 594, 960, 1258, 1569
HapII	CCGG	3 cut(s)	255, 439, 1459
HgaI	GACGC	1 cut(s)	393
Hin1II	CATG	4 cut(s)	247, 282, 835, 1491
HincII	GTYRAC	2 cut(s)	886, 1594
HindII	GTYRAC	2 cut(s)	886, 1594
HindIII	AAGCTT	2 cut(s)	787, 1238
HinfI	GANTC	7 cut(s)	235, 749, 890, 921, 1170, 1524, 1553
HpaII	CCGG	3 cut(s)	255, 439, 1459
HphI	GGTGA	3 cut(s)	509, 1418, 1696
Hpy166II	GTNNAC	9 cut(s)	131, 507, 655, 685, 886, 1052, 1413, 1464, 1594
Hpy188I	TCNGA	6 cut(s)	219, 360, 754, 840, 853, 1028
Hpy8I	GTNNAC	9 cut(s)	131, 507, 655, 685, 886, 1052, 1413, 1464, 1594
HpyAV	CCTTC	4 cut(s)	749, 974, 1197, 1765
HpyCH4III	ACNGT	6 cut(s)	25, 308, 674, 769, 1406, 1468
HpyCH4IV	ACGT	4 cut(s)	801, 1054, 1365, 1697
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1049, 1159, 1493, 1675
HpyF3I	CTNAG	5 cut(s)	11, 69, 790, 1163, 1617
HpySE526I	ACGT	4 cut(s)	801, 1054, 1365, 1697
Hsp92II	CATG	4 cut(s)	247, 282, 835, 1491
Ksp22I	TGATCA	1 cut(s)	1743
Kzo9I	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
LmnI	GCTCC	1 cut(s)	366
Lsp1109I	GCAGC	2 cut(s)	965, 1608
LweI	GCATC	3 cut(s)	525, 552, 1341
MaeI	CTAG	4 cut(s)	296, 743, 876, 1044
MaeII	ACGT	4 cut(s)	801, 1054, 1365, 1697
MaeIII	GTNAC	4 cut(s)	497, 826, 907, 1096
MalI	GATC	9 cut(s)	75, 357, 722, 760, 837, 1021, 1087, 1717, 1745
MboI	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
MboII	GAAGA	5 cut(s)	54, 544, 668, 1237, 1680
MflI	RGATCY	3 cut(s)	73, 720, 1019
MhlI	GDGCHC	2 cut(s)	1054, 1657
MlsI	TGGCCA	1 cut(s)	1569
MluNI	TGGCCA	1 cut(s)	1569
MlyI	GAGTC	3 cut(s)	758, 899, 1547
MmeI	TCCRAC	3 cut(s)	784, 898, 1501
Mox20I	TGGCCA	1 cut(s)	1569
Mph1103I	ATGCAT	1 cut(s)	1381
MscI	TGGCCA	1 cut(s)	1569
MseI	TTAA	7 cut(s)	180, 351, 390, 432, 1140, 1179, 1296
MslI	CAYNNNNRTG	2 cut(s)	1349, 1368
Msp20I	TGGCCA	1 cut(s)	1569
MspA1I	CMGCKG	2 cut(s)	956, 971
MspI	CCGG	3 cut(s)	255, 439, 1459
MspR9I	CCNGG	7 cut(s)	168, 250, 440, 660, 1013, 1459, 1482
Mva1269I	GAATGC	3 cut(s)	847, 1234, 1379
MvaI	CCWGG	5 cut(s)	168, 250, 660, 1013, 1482
MvnI	CGCG	2 cut(s)	681, 869
MwoI	GCNNNNNNNGC	4 cut(s)	1049, 1159, 1493, 1675
NciI	CCSGG	2 cut(s)	440, 1459
NcoI	CCATGG	1 cut(s)	831
NdeII	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
NlaIII	CATG	4 cut(s)	247, 282, 835, 1491
NlaIV	GGNNCC	6 cut(s)	75, 301, 722, 961, 975, 1654
NmuCI	GTSAC	1 cut(s)	497
NruI	TCGCGA	1 cut(s)	869
NsiI	ATGCAT	1 cut(s)	1381
PagI	TCATGA	1 cut(s)	243
PctI	GAATGC	3 cut(s)	847, 1234, 1379
PfeI	GAWTC	4 cut(s)	235, 921, 1170, 1524
PkrI	GCNGC	3 cut(s)	955, 1623, 1677
PleI	GAGTC	3 cut(s)	757, 898, 1547
PmaCI	CACGTG	1 cut(s)	1366
PmlI	CACGTG	1 cut(s)	1366
PpsI	GAGTC	3 cut(s)	757, 898, 1547
Ppu21I	YACGTR	1 cut(s)	1366
PpuMI	RGGWCCY	1 cut(s)	170
PshBI	ATTAAT	3 cut(s)	432, 1140, 1296
PsiI	TTATAA	2 cut(s)	339, 1236
Psp5II	RGGWCCY	1 cut(s)	170
Psp6I	CCWGG	5 cut(s)	166, 248, 658, 1011, 1480
PspCI	CACGTG	1 cut(s)	1366
PspEI	GGTNACC	1 cut(s)	826
PspGI	CCWGG	5 cut(s)	166, 248, 658, 1011, 1480
PspN4I	GGNNCC	6 cut(s)	75, 301, 722, 961, 975, 1654
PspPI	GGNCC	6 cut(s)	170, 252, 593, 959, 974, 1461
PspPPI	RGGWCCY	1 cut(s)	170
PstI	CTGCAG	1 cut(s)	1335
PsuI	RGATCY	3 cut(s)	73, 720, 1019
PvuII	CAGCTG	1 cut(s)	956
RruI	TCGCGA	1 cut(s)	869
RsaI	GTAC	6 cut(s)	132, 506, 654, 684, 1432, 1470
RsaNI	GTAC	6 cut(s)	131, 505, 653, 683, 1431, 1469
RseI	CAYNNNNRTG	2 cut(s)	1349, 1368
SaqAI	TTAA	7 cut(s)	180, 351, 390, 432, 1140, 1179, 1296
SatI	GCNGC	3 cut(s)	954, 1622, 1676
Sau3AI	GATC	9 cut(s)	73, 355, 720, 758, 835, 1019, 1085, 1715, 1743
Sau96I	GGNCC	6 cut(s)	170, 252, 593, 959, 974, 1461
SchI	GAGTC	3 cut(s)	758, 899, 1547
ScrFI	CCNGG	7 cut(s)	168, 250, 440, 660, 1013, 1459, 1482
SduI	GDGCHC	2 cut(s)	1054, 1657
SfaNI	GCATC	3 cut(s)	525, 552, 1341
SfcI	CTRYAG	1 cut(s)	1331
SinI	GGWCC	3 cut(s)	170, 974, 1461
SmiMI	CAYNNNNRTG	2 cut(s)	1349, 1368
SsiI	CCGC	4 cut(s)	317, 971, 1650, 1676
SspMI	CTAG	4 cut(s)	296, 743, 876, 1044
StyD4I	CCNGG	7 cut(s)	166, 248, 438, 658, 1011, 1457, 1480
StyI	CCWWGG	2 cut(s)	556, 831
TaaI	ACNGT	6 cut(s)	25, 308, 674, 769, 1406, 1468
TaiI	ACGT	4 cut(s)	804, 1057, 1368, 1700
TatI	WGTACW	2 cut(s)	652, 1468
TauI	GCSGC	1 cut(s)	1678
TfiI	GAWTC	4 cut(s)	235, 921, 1170, 1524
Tru1I	TTAA	7 cut(s)	180, 351, 390, 432, 1140, 1179, 1296
Tru9I	TTAA	7 cut(s)	180, 351, 390, 432, 1140, 1179, 1296
TscAI	CASTG	4 cut(s)	118, 774, 1171, 1740
TseFI	GTSAC	1 cut(s)	497
TseI	GCWGC	2 cut(s)	953, 1621
Tsp45I	GTSAC	1 cut(s)	497
TspDTI	ATGAA	3 cut(s)	267, 999, 1022
TspRI	CASTG	4 cut(s)	118, 774, 1171, 1740
VneI	GTGCAC	1 cut(s)	1050
VpaK11BI	GGWCC	3 cut(s)	170, 974, 1461
VspI	ATTAAT	3 cut(s)	432, 1140, 1296
XapI	RAATTY	3 cut(s)	258, 712, 986
XcmI	CCANNNNNNNNNTGG	1 cut(s)	327
XspI	CTAG	4 cut(s)	296, 743, 876, 1044
Zsp2I	ATGCAT	1 cut(s)	1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.