Rmu_sc0001394.1_g000006

Monocopper oxidase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001394.1
Physical Location & Seq
Reverse (-)
40055 .. 42883
2829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001394.1_g000006.1.cds

Sequence Viewer

Length: 1320 bp
atggcatgttctagggatggggatataaccattttgattggtgattggtacacaagaaaccatacggctttgaggaagacccttgatgcagggaaaggccttggcataccagatggtgttctcatcaatgggaaaggcccttaccaatacaacactacacttgtcccggatggcattgattacgaaacaattgatgtacacccagggaaaacttaccgtcttcgcgtacacaacgttggagtgtcaactactctaaatttcaggattcagaaccacaatctgcttctagcagagtcagagggatcatatacagtacaacagaattatacgagcttagatatacatgtcggacaatcttattcatttctgttaacaacggatcagaatgcaagcagtgattattatattgtagcaagtgctagatttgtgaacgagtcacattggcaaaaagttactggagttgggattctgcgctattctaattccaaaggaaaggcagctggtcccctcccaccaccaccaagtgacgaatttgacaaaaccttctcgatgaaccaggccagatccatcagatggaatgtatcagccagtggtgcacgtcctaatccacagggatcttttagatatggctccatcaatgtaactgatgtttatgtgttgaaaaacaagccaccagtaatgatcaatgggaaacgccgagcaacactaagtggaaactcatttgtaaatcctgccacaccaatccggctagctgaccagtacaaattgaagggtgtttataagcttgacttcccaaaaaggccacttactggagcacccaggatggagacatctgtgattaatggaacatttagaggatttattgaaatcatacttcagaacaatgacaccaagatgcagagttaccacgtggatggatatgcattttttgttgttgggatggactacggtgactggacagagaatagcagggggacatataataaatgggatggaatagcccgttctacaatacaggtttatcctggggcatggacagcaatcttgatttctttggataatgttggagtctggaacattagagctgaaaatctcgattcatggtatcttggccaagaaacttatatcaaggtcgtcaatccagaaccgactaacaagactgagctccccatgccagacaatgccctattttgtggtgctctaagcaaattgcagaagcctgaagacatctcttcggaagcatcactcactattggtcaatcaagggtgttcttcactctgctgatgatcatctgcactttaattcccattttccactaa

Protein Analysis

439

Amino Acids

48.93

Weight (kDa)

8.7

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011697)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 780
AccB7I CCANNNNNTGG 2 cut(s) 573, 809
AccII CGCG 1 cut(s) 225
AclI AACGTT 1 cut(s) 234
AclWI GGATC 4 cut(s) 310, 387, 558, 622
AcoI YGGCCR 1 cut(s) 1111
AcsI RAATTY 2 cut(s) 256, 530
AcuI CTGAAG 2 cut(s) 860, 1242
AcvI CACGTG 1 cut(s) 910
AdeI CACNNNGTG 2 cut(s) 524, 710
AfaI GTAC 5 cut(s) 50, 198, 228, 315, 761
AfiI CCNNNNNNNGG 2 cut(s) 573, 809
AflIII ACRYGT 1 cut(s) 343
AgsI TTSAA 3 cut(s) 661, 769, 866
AjiI CACGTC 1 cut(s) 599
AjnI CCWGG 4 cut(s) 202, 555, 818, 1024
AluBI AGCT 6 cut(s) 333, 500, 752, 784, 1085, 1165
AluI AGCT 6 cut(s) 333, 500, 752, 784, 1085, 1165
Alw21I GWGCWC 4 cut(s) 598, 817, 1167, 1201
Alw26I GTCTC 1 cut(s) 821
Alw44I GTGCAC 1 cut(s) 594
AlwI GGATC 4 cut(s) 310, 387, 558, 622
AoxI GGCC 5 cut(s) 97, 136, 558, 800, 1111
ApaLI GTGCAC 1 cut(s) 594
ApeKI GCWGC 1 cut(s) 497
ApoI RAATTY 2 cut(s) 256, 530
AseI ATTAAT 1 cut(s) 840
AspLEI GCGC 1 cut(s) 474
AspS9I GGNCC 2 cut(s) 137, 503
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 2 cut(s) 53, 962
AsuNHI GCTAGC 1 cut(s) 748
AvaII GGWCC 1 cut(s) 503
BaeGI GKGCMC 1 cut(s) 598
BalI TGGCCA 1 cut(s) 1113
BanII GRGCYC 1 cut(s) 1167
BbrPI CACGTG 1 cut(s) 910
BbsI GAAGAC 3 cut(s) 83, 212, 1230
Bbv12I GWGCWC 4 cut(s) 598, 817, 1167, 1201
BbvI GCAGC 1 cut(s) 509
BceAI ACGGC 1 cut(s) 81
BciT130I CCWGG 4 cut(s) 204, 557, 820, 1026
BclI TGATCA 2 cut(s) 681, 1287
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 1 cut(s) 821
BfaI CTAG 4 cut(s) 12, 287, 420, 749
BisI GCNGC 1 cut(s) 498
BlsI GCNGC 1 cut(s) 499
Bme1390I CCNGG 5 cut(s) 167, 204, 557, 820, 1026
Bme18I GGWCC 1 cut(s) 503
BmgBI CACGTC 1 cut(s) 599
BmgT120I GGNCC 2 cut(s) 137, 503
BmiI GGNNCC 2 cut(s) 505, 631
BmrFI CCNGG 5 cut(s) 167, 204, 557, 820, 1026
BmsI GCATC 3 cut(s) 76, 885, 1250
BmtI GCTAGC 1 cut(s) 752
BpiI GAAGAC 3 cut(s) 83, 212, 1230
BpmI CTGGAG 2 cut(s) 477, 831
BpuMI CCSGG 1 cut(s) 167
BsaAI YACGTR 1 cut(s) 910
BsaBI GATNNNNATC 1 cut(s) 1289
BsaJI CCNNGG 5 cut(s) 100, 202, 203, 818, 1025
Bsc4I CCNNNNNNNGG 2 cut(s) 573, 809
Bse1I ACTGG 6 cut(s) 460, 588, 674, 757, 814, 959
Bse8I GATNNNNATC 1 cut(s) 1289
BseBI CCWGG 4 cut(s) 204, 557, 820, 1026
BseDI CCNNGG 5 cut(s) 100, 202, 203, 818, 1025
BseGI GGATG 6 cut(s) 22, 175, 828, 919, 945, 997
BseJI GATNNNNATC 1 cut(s) 1289
BseLI CCNNNNNNNGG 2 cut(s) 573, 809
BseMII CTCAG 1 cut(s) 1152
BseNI ACTGG 6 cut(s) 460, 588, 674, 757, 814, 959
BseSI GKGCMC 1 cut(s) 598
BseXI GCAGC 1 cut(s) 509
BsgI GTGCAG 1 cut(s) 1279
Bsh1236I CGCG 1 cut(s) 225
BshFI GGCC 5 cut(s) 99, 138, 560, 802, 1113
BsiHKAI GWGCWC 4 cut(s) 598, 817, 1167, 1201
BsiSI CCGG 2 cut(s) 167, 745
BslFI GGGAC 3 cut(s) 149, 489, 988
BslI CCNNNNNNNGG 2 cut(s) 573, 809
BsmAI GTCTC 1 cut(s) 821
BsmFI GGGAC 3 cut(s) 149, 489, 988
BsmI GAATGC 1 cut(s) 391
BsnI GGCC 5 cut(s) 99, 138, 560, 802, 1113
Bsp1286I GDGCHC 4 cut(s) 598, 817, 1167, 1201
Bsp1407I TGTACA 1 cut(s) 196
Bsp143I GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
BspANI GGCC 5 cut(s) 99, 138, 560, 802, 1113
BspCNI CTCAG 1 cut(s) 1153
BspFNI CGCG 1 cut(s) 225
BspLI GGNNCC 2 cut(s) 505, 631
BspOI GCTAGC 1 cut(s) 752
BspPI GGATC 4 cut(s) 310, 387, 558, 622
BsrGI TGTACA 1 cut(s) 196
BsrI ACTGG 6 cut(s) 460, 588, 674, 757, 814, 959
BssECI CCNNGG 5 cut(s) 100, 202, 203, 818, 1025
BssMI GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
BssT1I CCWWGG 1 cut(s) 100
Bst2UI CCWGG 4 cut(s) 204, 557, 820, 1026
Bst4CI ACNGT 3 cut(s) 218, 313, 950
Bst6I CTCTTC 1 cut(s) 1237
BstAUI TGTACA 1 cut(s) 196
BstBAI YACGTR 1 cut(s) 910
BstC8I GCNNGC 2 cut(s) 391, 750
BstDEI CTNAG 4 cut(s) 334, 707, 1161, 1202
BstF5I GGATG 6 cut(s) 22, 175, 828, 919, 945, 997
BstFNI CGCG 1 cut(s) 225
BstHHI GCGC 1 cut(s) 474
BstKTI GATC 6 cut(s) 305, 382, 566, 617, 684, 1290
BstMAI GTCTC 1 cut(s) 821
BstMBI GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
BstMWI GCNNNNNNNGC 3 cut(s) 593, 1037, 1171
BstNI CCWGG 4 cut(s) 204, 557, 820, 1026
BstNSI RCATGY 2 cut(s) 9, 347
BstSCI CCNGG 5 cut(s) 165, 202, 555, 818, 1024
BstSLI GKGCMC 1 cut(s) 598
BstUI CGCG 1 cut(s) 225
BstV1I GCAGC 1 cut(s) 509
BstV2I GAAGAC 3 cut(s) 83, 212, 1230
BstX2I RGATCY 2 cut(s) 563, 614
BstXI CCANNNNNNTGG 1 cut(s) 914
BstYI RGATCY 2 cut(s) 563, 614
BsuRI GGCC 5 cut(s) 99, 138, 560, 802, 1113
BtrI CACGTC 1 cut(s) 599
BtsCI GGATG 6 cut(s) 22, 175, 828, 919, 945, 997
BtsI GCAGTG 1 cut(s) 400
BtsIMutI CAGTG 2 cut(s) 400, 595
Cac8I GCNNGC 2 cut(s) 391, 750
CfoI GCGC 1 cut(s) 474
Cfr13I GGNCC 2 cut(s) 137, 503
Csp6I GTAC 5 cut(s) 49, 197, 227, 314, 760
CviAII CATG 5 cut(s) 6, 344, 1032, 1101, 1171
CviQI GTAC 5 cut(s) 49, 197, 227, 314, 760
DdeI CTNAG 4 cut(s) 334, 707, 1161, 1202
DpnI GATC 6 cut(s) 304, 381, 565, 616, 683, 1289
DpnII GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
DraIII CACNNNGTG 2 cut(s) 524, 710
EaeI YGGCCR 1 cut(s) 1111
Eam1104I CTCTTC 1 cut(s) 1237
EarI CTCTTC 1 cut(s) 1237
Ecl136II GAGCTC 1 cut(s) 1165
Eco130I CCWWGG 1 cut(s) 100
Eco147I AGGCCT 1 cut(s) 99
Eco24I GRGCYC 1 cut(s) 1167
Eco47I GGWCC 1 cut(s) 503
Eco53kI GAGCTC 1 cut(s) 1165
Eco57I CTGAAG 2 cut(s) 860, 1242
Eco72I CACGTG 1 cut(s) 910
EcoICRI GAGCTC 1 cut(s) 1165
EcoO109I RGGNCCY 1 cut(s) 137
EcoRII CCWGG 4 cut(s) 202, 555, 818, 1024
EcoT14I CCWWGG 1 cut(s) 100
EcoT22I ATGCAT 1 cut(s) 925
EcoT38I GRGCYC 1 cut(s) 1167
ErhI CCWWGG 1 cut(s) 100
FaeI CATG 5 cut(s) 9, 347, 1035, 1104, 1174
FalI AAGNNNNNCTT 2 cut(s) 773, 805
FaqI GGGAC 3 cut(s) 149, 489, 988
FatI CATG 5 cut(s) 5, 343, 1031, 1100, 1170
FbaI TGATCA 2 cut(s) 681, 1287
Fnu4HI GCNGC 1 cut(s) 498
FokI GGATG 6 cut(s) 29, 182, 835, 926, 952, 1004
FriOI GRGCYC 1 cut(s) 1167
Fsp4HI GCNGC 1 cut(s) 498
FspBI CTAG 4 cut(s) 12, 287, 420, 749
GlaI GCGC 1 cut(s) 473
GluI GCNGC 1 cut(s) 498
GsuI CTGGAG 2 cut(s) 477, 831
HaeIII GGCC 5 cut(s) 99, 138, 560, 802, 1113
HapII CCGG 2 cut(s) 167, 745
HhaI GCGC 1 cut(s) 474
Hin1II CATG 5 cut(s) 9, 347, 1035, 1104, 1174
Hin6I GCGC 1 cut(s) 472
HinP1I GCGC 1 cut(s) 472
HincII GTYRAC 2 cut(s) 246, 372
HindII GTYRAC 2 cut(s) 246, 372
HindIII AAGCTT 1 cut(s) 782
HinfI GANTC 6 cut(s) 265, 293, 434, 466, 1068, 1097
HpaI GTTAAC 1 cut(s) 372
HpaII CCGG 2 cut(s) 167, 745
HphI GGTGA 2 cut(s) 53, 962
Hpy166II GTNNAC 7 cut(s) 51, 199, 229, 246, 372, 430, 596
Hpy188I TCNGA 7 cut(s) 270, 298, 350, 384, 572, 879, 1237
Hpy188III TCNNGA 6 cut(s) 262, 547, 1045, 1072, 1094, 1142
Hpy8I GTNNAC 7 cut(s) 51, 199, 229, 246, 372, 430, 596
HpyAV CCTTC 2 cut(s) 553, 763
HpyCH4III ACNGT 3 cut(s) 218, 313, 950
HpyCH4IV ACGT 3 cut(s) 234, 598, 909
HpyCH4V TGCA 7 cut(s) 89, 389, 596, 898, 923, 1213, 1296
HpyF10VI GCNNNNNNNGC 3 cut(s) 593, 1037, 1171
HpyF3I CTNAG 4 cut(s) 334, 707, 1161, 1202
HpySE526I ACGT 3 cut(s) 234, 598, 909
Hsp92II CATG 5 cut(s) 9, 347, 1035, 1104, 1174
HspAI GCGC 1 cut(s) 472
Ksp22I TGATCA 2 cut(s) 681, 1287
KspAI GTTAAC 1 cut(s) 372
Kzo9I GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
LmnI GCTCC 3 cut(s) 635, 812, 1170
Lsp1109I GCAGC 1 cut(s) 509
LweI GCATC 3 cut(s) 76, 885, 1250
MaeI CTAG 4 cut(s) 12, 287, 420, 749
MaeII ACGT 3 cut(s) 234, 598, 909
MaeIII GTNAC 6 cut(s) 435, 451, 524, 640, 902, 950
MalI GATC 6 cut(s) 304, 381, 565, 616, 683, 1289
MboI GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
MboII GAAGA 5 cut(s) 88, 212, 1224, 1235, 1264
MfeI CAATTG 1 cut(s) 189
MflI RGATCY 2 cut(s) 563, 614
MhlI GDGCHC 4 cut(s) 598, 817, 1167, 1201
MlsI TGGCCA 1 cut(s) 1113
MluCI AATT 8 cut(s) 189, 256, 322, 481, 530, 764, 1208, 1302
MluNI TGGCCA 1 cut(s) 1113
MlyI GAGTC 3 cut(s) 302, 443, 1077
MmeI TCCRAC 3 cut(s) 217, 328, 1045
MnlI CCTC 4 cut(s) 66, 292, 518, 848
Mox20I TGGCCA 1 cut(s) 1113
Mph1103I ATGCAT 1 cut(s) 925
MscI TGGCCA 1 cut(s) 1113
MseI TTAA 3 cut(s) 371, 840, 1301
MslI CAYNNNNRTG 2 cut(s) 893, 912
Msp20I TGGCCA 1 cut(s) 1113
MspA1I CMGCKG 1 cut(s) 500
MspI CCGG 2 cut(s) 167, 745
MspR9I CCNGG 5 cut(s) 167, 204, 557, 820, 1026
MunI CAATTG 1 cut(s) 189
Mva1269I GAATGC 1 cut(s) 391
MvaI CCWGG 4 cut(s) 204, 557, 820, 1026
MvnI CGCG 1 cut(s) 225
MwoI GCNNNNNNNGC 3 cut(s) 593, 1037, 1171
NciI CCSGG 1 cut(s) 167
NdeII GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
NheI GCTAGC 1 cut(s) 748
NlaIII CATG 5 cut(s) 9, 347, 1035, 1104, 1174
NlaIV GGNNCC 2 cut(s) 505, 631
NmeAIII GCCGAG 1 cut(s) 722
NmuCI GTSAC 3 cut(s) 435, 524, 950
NsiI ATGCAT 1 cut(s) 925
NspI RCATGY 2 cut(s) 9, 347
PasI CCCWGGG 1 cut(s) 203
PceI AGGCCT 1 cut(s) 99
PciI ACATGT 1 cut(s) 343
PctI GAATGC 1 cut(s) 391
PfeI GAWTC 3 cut(s) 265, 466, 1097
PflMI CCANNNNNTGG 2 cut(s) 573, 809
PfoI TCCNGGA 1 cut(s) 165
PkrI GCNGC 1 cut(s) 499
PleI GAGTC 3 cut(s) 301, 442, 1076
PmaCI CACGTG 1 cut(s) 910
PmlI CACGTG 1 cut(s) 910
PpsI GAGTC 3 cut(s) 301, 442, 1076
Ppu21I YACGTR 1 cut(s) 910
PscI ACATGT 1 cut(s) 343
PshBI ATTAAT 1 cut(s) 840
PsiI TTATAA 1 cut(s) 780
Psp124BI GAGCTC 1 cut(s) 1167
Psp1406I AACGTT 1 cut(s) 234
Psp6I CCWGG 4 cut(s) 202, 555, 818, 1024
PspCI CACGTG 1 cut(s) 910
PspGI CCWGG 4 cut(s) 202, 555, 818, 1024
PspN4I GGNNCC 2 cut(s) 505, 631
PspPI GGNCC 2 cut(s) 137, 503
PsuI RGATCY 2 cut(s) 563, 614
PvuII CAGCTG 1 cut(s) 500
RsaI GTAC 5 cut(s) 50, 198, 228, 315, 761
RsaNI GTAC 5 cut(s) 49, 197, 227, 314, 760
RseI CAYNNNNRTG 2 cut(s) 893, 912
SacI GAGCTC 1 cut(s) 1167
SaqAI TTAA 3 cut(s) 371, 840, 1301
SatI GCNGC 1 cut(s) 498
Sau3AI GATC 6 cut(s) 302, 379, 563, 614, 681, 1287
Sau96I GGNCC 2 cut(s) 137, 503
SchI GAGTC 3 cut(s) 302, 443, 1077
ScrFI CCNGG 5 cut(s) 167, 204, 557, 820, 1026
SduI GDGCHC 4 cut(s) 598, 817, 1167, 1201
SfaNI GCATC 3 cut(s) 76, 885, 1250
SinI GGWCC 1 cut(s) 503
SmiMI CAYNNNNRTG 2 cut(s) 893, 912
Sse9I AATT 8 cut(s) 189, 256, 322, 481, 530, 764, 1208, 1302
SseBI AGGCCT 1 cut(s) 99
SspMI CTAG 4 cut(s) 12, 287, 420, 749
SstI GAGCTC 1 cut(s) 1167
StuI AGGCCT 1 cut(s) 99
StyD4I CCNGG 5 cut(s) 165, 202, 555, 818, 1024
StyI CCWWGG 1 cut(s) 100
TaaI ACNGT 3 cut(s) 218, 313, 950
TaiI ACGT 3 cut(s) 237, 601, 912
TaqI TCGA 2 cut(s) 548, 1095
TasI AATT 8 cut(s) 189, 256, 322, 481, 530, 764, 1208, 1302
TatI WGTACW 3 cut(s) 196, 313, 759
TfiI GAWTC 3 cut(s) 265, 466, 1097
Tru1I TTAA 3 cut(s) 371, 840, 1301
Tru9I TTAA 3 cut(s) 371, 840, 1301
TscAI CASTG 2 cut(s) 400, 595
TseFI GTSAC 3 cut(s) 435, 524, 950
TseI GCWGC 1 cut(s) 497
Tsp45I GTSAC 3 cut(s) 435, 524, 950
TspDTI ATGAA 3 cut(s) 351, 566, 1089
TspGWI ACGGA 1 cut(s) 392
TspRI CASTG 2 cut(s) 400, 595
Van91I CCANNNNNTGG 2 cut(s) 573, 809
VneI GTGCAC 1 cut(s) 594
VpaK11BI GGWCC 1 cut(s) 503
VspI ATTAAT 1 cut(s) 840
XapI RAATTY 2 cut(s) 256, 530
XceI RCATGY 2 cut(s) 9, 347
XspI CTAG 4 cut(s) 12, 287, 420, 749
Zsp2I ATGCAT 1 cut(s) 925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.