MD04G1138100.v1.1

BEL1-like homeodomain protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
22535478 .. 22539106
3629 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1138100.v1.1.491

Sequence Viewer

Length: 1248 bp
ATGGCTGAGGGTTTCGAACCCTACCATGTGCCTCAACAGAGCAGAAGGGACAAGCTCAGGGTCCTGGCGGGTCAAACCCAACCGGGTTGCCTCCAACCCGGATCACCATCTCCTCCTCCTCCACATCTCCACCACGCTTTGCTCCCTCTTTCATACGATCCCACCACCACCTTCATCTCCTCTTCCTCAGGTTTGCTCACGTGCGCCGACCCCGCCGTGAAAGAAGAGGGTAGTCATCATCACGTGATCGACCACTTGATGGGTTTTGCTTCCAATTCCACCTCTTCTACTTTTCGCCACAACAACCACCACCATCCCTACATGGATCCACAATTCCCTCTCACTCCCACCGCCGCCGTTCAAGAAATCAACGCCAACCCATTTCTGTACCCCCCTCAAAACCTCCACCCCCTCAGAGATTTCGACCACCAGCAACCTCCCTACGACAATCAAGTAGTCGTCTTCAAACCAGAGCCTCTCTCTTTGTCCCTCTCTTCTTCCCAACCCACCAACCAGCACACCCAGCAAACCCAGAACAACACAAACAACAACAATCTCCAGAGATTTTCTTCGCCTGGGATTAATTATGATTCACTCCATTCTGGCGTTAGTGTTGCTTTTGTCCCTTTTGGACCGTTCACGGGGTACGCTTCGATTCTGAAGGGATCTAGGTTTTTAAAGCCGGCGCAGCATTTGCTGGAGGAGTTTTGCGATGTGGGCAGTCGTGAAATTTACAGCGCAAAAGTCTTGCCGCTGGAGGATTCCTCCTTTTTTGACCCTCCTATTGAGAGCTTTGGTGACGACGACTCACAGATGGCTGGGGGAGACGGCGGTGAGAGTAGAAGGCAAAATTCCAGACTAATTTCCATGCTCGACGAGGTTTATAGGAGGTACAAGCAATACTATCAACAGATGCAGGCAGTGGCAAGGTCATTTGAGTATGTTGCTGGGCTTGGAAATGCTGCTCCTTATGCAAACTTAGCGATAAAAGCCCTGGCTAGACATTTTAAGTGTTTGAAGAATGCTATCACCGAGCAGCTTCACTTTAGAAGTCGGAATGCTACTCATTTAAGACATGAAAAAGATGGAAATCCAATACTTCATAGCAGAAGTGCTAATGGCCAGAGGTCCCTTCATAACTCTGAGTTTCTGGAGCACCAGCCTGTTTGGAGACCACAAAGGGGTCTTCCTGAGCGCGCCGTTACTGTTCTTAGGGCCTGGTTGTTTGAACACTTCCTGCATCCGTAA

Protein Analysis

416

Amino Acids

46.7

Weight (kDa)

6.81

Isoelectric Point (pI)

62.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
POX PF07526 219 - 344 1e-35 Associated with HOX
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 259
AccII CGCG 1 cut(s) 1197
AciI CCGC 6 cut(s) 68, 213, 351, 354, 752, 831
AclWI GGATC 5 cut(s) 109, 152, 320, 333, 673
AcoI YGGCCR 1 cut(s) 1120
AcsI RAATTY 2 cut(s) 729, 850
AcuI CTGAAG 1 cut(s) 680
AcvI CACGTG 2 cut(s) 201, 244
AfaI GTAC 3 cut(s) 389, 647, 893
AfiI CCNNNNNNNGG 3 cut(s) 259, 641, 1181
AgsI TTSAA 4 cut(s) 362, 466, 1018, 1229
AjnI CCWGG 4 cut(s) 63, 574, 993, 1217
AluBI AGCT 3 cut(s) 55, 792, 1039
AluI AGCT 3 cut(s) 55, 792, 1039
Alw21I GWGCWC 1 cut(s) 1158
Alw26I GTCTC 2 cut(s) 819, 1165
AlwI GGATC 5 cut(s) 109, 152, 320, 333, 673
AoxI GGCC 2 cut(s) 1120, 1215
ApeKI GCWGC 3 cut(s) 688, 962, 1036
ApoI RAATTY 2 cut(s) 729, 850
AseI ATTAAT 1 cut(s) 582
AspLEI GCGC 5 cut(s) 206, 688, 740, 1197, 1199
AspS9I GGNCC 4 cut(s) 61, 632, 1128, 1215
AsuC2I CCSGG 2 cut(s) 84, 99
AsuHPI GGTGA 4 cut(s) 96, 809, 845, 1021
AsuII TTCGAA 1 cut(s) 15
AvaII GGWCC 3 cut(s) 61, 632, 1128
AxyI CCTNAGG 1 cut(s) 187
BalI TGGCCA 1 cut(s) 1122
BamHI GGATCC 1 cut(s) 325
BbrPI CACGTG 2 cut(s) 201, 244
BbsI GAAGAC 2 cut(s) 454, 1178
Bbv12I GWGCWC 1 cut(s) 1158
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 3 cut(s) 700, 949, 1048
BccI CCATC 5 cut(s) 115, 253, 321, 808, 1079
BceAI ACGGC 4 cut(s) 200, 341, 844, 1184
BciT130I CCWGG 4 cut(s) 65, 576, 995, 1219
BcnI CCSGG 2 cut(s) 84, 99
BcoDI GTCTC 2 cut(s) 819, 1165
BfaI CTAG 2 cut(s) 669, 999
BisI GCNGC 5 cut(s) 354, 689, 752, 963, 1037
BlsI GCNGC 5 cut(s) 355, 690, 753, 964, 1038
Bme1390I CCNGG 6 cut(s) 65, 84, 99, 576, 995, 1219
Bme18I GGWCC 3 cut(s) 61, 632, 1128
BmgT120I GGNCC 4 cut(s) 61, 632, 1128, 1215
BmiI GGNNCC 3 cut(s) 62, 327, 1130
BmrFI CCNGG 6 cut(s) 65, 84, 99, 576, 995, 1219
BmsI GCATC 1 cut(s) 903
BpiI GAAGAC 2 cut(s) 454, 1178
BplI GAGNNNNNCTC 4 cut(s) 464, 496, 749, 781
BpmI CTGGAG 4 cut(s) 542, 719, 776, 1172
Bpu10I CCTNAGC 3 cut(s) 6, 56, 1191
Bpu14I TTCGAA 1 cut(s) 15
BpuMI CCSGG 2 cut(s) 84, 99
BsaAI YACGTR 2 cut(s) 201, 244
BsaBI GATNNNNATC 2 cut(s) 106, 1089
BsaI GGTCTC 1 cut(s) 1165
BsaJI CCNNGG 2 cut(s) 575, 993
Bsc4I CCNNNNNNNGG 3 cut(s) 259, 641, 1181
Bse118I RCCGGY 1 cut(s) 682
Bse21I CCTNAGG 1 cut(s) 187
Bse8I GATNNNNATC 2 cut(s) 106, 1089
BseBI CCWGG 4 cut(s) 65, 576, 995, 1219
BseDI CCNNGG 2 cut(s) 575, 993
BseGI GGATG 2 cut(s) 313, 1240
BseJI GATNNNNATC 2 cut(s) 106, 1089
BseLI CCNNNNNNNGG 3 cut(s) 259, 641, 1181
BseMII CTCAG 5 cut(s) 70, 201, 427, 1134, 1182
BsePI GCGCGC 1 cut(s) 1195
BseRI GAGGAG 5 cut(s) 102, 105, 108, 169, 716
BseXI GCAGC 3 cut(s) 700, 949, 1048
BseYI CCCAGC 3 cut(s) 522, 818, 947
Bsh1236I CGCG 1 cut(s) 1197
BshFI GGCC 2 cut(s) 1122, 1217
BsiHKAI GWGCWC 1 cut(s) 1158
BsiSI CCGG 3 cut(s) 83, 99, 683
BslFI GGGAC 4 cut(s) 62, 472, 608, 1114
BslI CCNNNNNNNGG 3 cut(s) 259, 641, 1181
BsmAI GTCTC 2 cut(s) 819, 1165
BsmBI CGTCTC 1 cut(s) 819
BsmFI GGGAC 4 cut(s) 62, 472, 608, 1114
BsmI GAATGC 2 cut(s) 1027, 1063
BsnI GGCC 2 cut(s) 1122, 1217
Bso31I GGTCTC 1 cut(s) 1165
Bsp119I TTCGAA 1 cut(s) 15
Bsp1286I GDGCHC 1 cut(s) 1158
Bsp143I GATC 5 cut(s) 101, 157, 246, 325, 665
BspACI CCGC 6 cut(s) 68, 213, 351, 354, 752, 831
BspANI GGCC 2 cut(s) 1122, 1217
BspCNI CTCAG 5 cut(s) 69, 200, 426, 1135, 1183
BspFNI CGCG 1 cut(s) 1197
BspLI GGNNCC 3 cut(s) 62, 327, 1130
BspPI GGATC 5 cut(s) 109, 152, 320, 333, 673
BspT104I TTCGAA 1 cut(s) 15
BspTNI GGTCTC 1 cut(s) 1165
BsrFI RCCGGY 1 cut(s) 682
BssAI RCCGGY 1 cut(s) 682
BssECI CCNNGG 2 cut(s) 575, 993
BssHII GCGCGC 1 cut(s) 1195
BssMI GATC 5 cut(s) 101, 157, 246, 325, 665
Bst2UI CCWGG 4 cut(s) 65, 576, 995, 1219
Bst4CI ACNGT 2 cut(s) 636, 1207
Bst6I CTCTTC 4 cut(s) 187, 219, 289, 499
BstAPI GCANNNNNTGC 1 cut(s) 694
BstBAI YACGTR 2 cut(s) 201, 244
BstBI TTCGAA 1 cut(s) 15
BstC8I GCNNGC 3 cut(s) 684, 918, 1197
BstDEI CTNAG 8 cut(s) 6, 56, 187, 413, 979, 1143, 1191, 1211
BstF5I GGATG 2 cut(s) 313, 1240
BstFNI CGCG 1 cut(s) 1197
BstHHI GCGC 5 cut(s) 206, 688, 740, 1197, 1199
BstKTI GATC 5 cut(s) 104, 160, 249, 328, 668
BstMAI GTCTC 2 cut(s) 819, 1165
BstMBI GATC 5 cut(s) 101, 157, 246, 325, 665
BstMWI GCNNNNNNNGC 8 cut(s) 212, 523, 688, 694, 717, 971, 980, 989
BstNI CCWGG 4 cut(s) 65, 576, 995, 1219
BstSCI CCNGG 6 cut(s) 63, 82, 97, 574, 993, 1217
BstUI CGCG 1 cut(s) 1197
BstV1I GCAGC 3 cut(s) 700, 949, 1048
BstV2I GAAGAC 2 cut(s) 454, 1178
BstX2I RGATCY 2 cut(s) 325, 665
BstYI RGATCY 2 cut(s) 325, 665
Bsu36I CCTNAGG 1 cut(s) 187
BsuRI GGCC 2 cut(s) 1122, 1217
BtgZI GCGATG 1 cut(s) 726
BtsCI GGATG 2 cut(s) 313, 1240
BtsI GCAGTG 1 cut(s) 927
BtsIMutI CAGTG 1 cut(s) 927
Cac8I GCNNGC 3 cut(s) 684, 918, 1197
CfoI GCGC 5 cut(s) 206, 688, 740, 1197, 1199
Cfr10I RCCGGY 1 cut(s) 682
Cfr13I GGNCC 4 cut(s) 61, 632, 1128, 1215
Csp6I GTAC 3 cut(s) 388, 646, 892
CviAII CATG 4 cut(s) 26, 322, 868, 1076
CviQI GTAC 3 cut(s) 388, 646, 892
DdeI CTNAG 8 cut(s) 6, 56, 187, 413, 979, 1143, 1191, 1211
DpnI GATC 5 cut(s) 103, 159, 248, 327, 667
DpnII GATC 5 cut(s) 101, 157, 246, 325, 665
DraI TTTAAA 1 cut(s) 678
EaeI YGGCCR 1 cut(s) 1120
Eam1104I CTCTTC 4 cut(s) 187, 219, 289, 499
EarI CTCTTC 4 cut(s) 187, 219, 289, 499
Eco31I GGTCTC 1 cut(s) 1165
Eco47I GGWCC 3 cut(s) 61, 632, 1128
Eco57I CTGAAG 1 cut(s) 680
Eco72I CACGTG 2 cut(s) 201, 244
Eco81I CCTNAGG 1 cut(s) 187
EcoO109I RGGNCCY 3 cut(s) 61, 1128, 1215
EcoRII CCWGG 4 cut(s) 63, 574, 993, 1217
Esp3I CGTCTC 1 cut(s) 819
FaeI CATG 4 cut(s) 29, 325, 871, 1079
FaqI GGGAC 4 cut(s) 62, 472, 608, 1114
FatI CATG 4 cut(s) 25, 321, 867, 1075
FauI CCCGC 2 cut(s) 61, 220
Fnu4HI GCNGC 5 cut(s) 354, 689, 752, 963, 1037
FokI GGATG 2 cut(s) 300, 1227
Fsp4HI GCNGC 5 cut(s) 354, 689, 752, 963, 1037
FspBI CTAG 2 cut(s) 669, 999
GlaI GCGC 5 cut(s) 205, 687, 739, 1196, 1198
GluI GCNGC 5 cut(s) 354, 689, 752, 963, 1037
GsaI CCCAGC 3 cut(s) 526, 822, 951
GsuI CTGGAG 4 cut(s) 542, 719, 776, 1172
HaeIII GGCC 2 cut(s) 1122, 1217
HapII CCGG 3 cut(s) 83, 99, 683
HhaI GCGC 5 cut(s) 206, 688, 740, 1197, 1199
Hin1II CATG 4 cut(s) 29, 325, 871, 1079
Hin6I GCGC 5 cut(s) 204, 686, 738, 1195, 1197
HinP1I GCGC 5 cut(s) 204, 686, 738, 1195, 1197
HinfI GANTC 4 cut(s) 590, 655, 761, 806
HpaII CCGG 3 cut(s) 83, 99, 683
HphI GGTGA 4 cut(s) 96, 809, 845, 1021
Hpy166II GTNNAC 1 cut(s) 639
Hpy188I TCNGA 4 cut(s) 416, 660, 1056, 1144
Hpy188III TCNNGA 6 cut(s) 362, 559, 725, 855, 1151, 1190
Hpy8I GTNNAC 1 cut(s) 639
Hpy99I CGWCG 2 cut(s) 806, 878
HpyAV CCTTC 5 cut(s) 39, 181, 655, 837, 1142
HpyCH4III ACNGT 2 cut(s) 636, 1207
HpyCH4IV ACGT 2 cut(s) 200, 243
HpyCH4V TGCA 3 cut(s) 916, 974, 1240
HpyF10VI GCNNNNNNNGC 8 cut(s) 212, 523, 688, 694, 717, 971, 980, 989
HpyF3I CTNAG 8 cut(s) 6, 56, 187, 413, 979, 1143, 1191, 1211
HpySE526I ACGT 2 cut(s) 200, 243
Hsp92II CATG 4 cut(s) 29, 325, 871, 1079
HspAI GCGC 5 cut(s) 204, 686, 738, 1195, 1197
KroI GCCGGC 1 cut(s) 682
KroNI GCCGGC 1 cut(s) 684
Kzo9I GATC 5 cut(s) 101, 157, 246, 325, 665
LmnI GCTCC 3 cut(s) 147, 970, 1153
Lsp1109I GCAGC 3 cut(s) 700, 949, 1048
LweI GCATC 1 cut(s) 903
MaeI CTAG 2 cut(s) 669, 999
MaeII ACGT 2 cut(s) 200, 243
MaeIII GTNAC 2 cut(s) 797, 1201
MalI GATC 5 cut(s) 103, 159, 248, 327, 667
MboI GATC 5 cut(s) 101, 157, 246, 325, 665
MboII GAAGA 9 cut(s) 174, 236, 276, 454, 486, 489, 561, 1030, 1178
MflI RGATCY 2 cut(s) 325, 665
MhlI GDGCHC 1 cut(s) 1158
MlsI TGGCCA 1 cut(s) 1122
MluCI AATT 6 cut(s) 274, 332, 583, 729, 850, 861
MluNI TGGCCA 1 cut(s) 1122
MlyI GAGTC 1 cut(s) 800
MmeI TCCRAC 2 cut(s) 118, 1034
Mox20I TGGCCA 1 cut(s) 1122
MroNI GCCGGC 1 cut(s) 682
MscI TGGCCA 1 cut(s) 1122
MseI TTAA 4 cut(s) 582, 677, 1008, 1070
Msp20I TGGCCA 1 cut(s) 1122
MspA1I CMGCKG 1 cut(s) 754
MspI CCGG 3 cut(s) 83, 99, 683
MspR9I CCNGG 6 cut(s) 65, 84, 99, 576, 995, 1219
Mva1269I GAATGC 2 cut(s) 1027, 1063
MvaI CCWGG 4 cut(s) 65, 576, 995, 1219
MvnI CGCG 1 cut(s) 1197
MwoI GCNNNNNNNGC 8 cut(s) 212, 523, 688, 694, 717, 971, 980, 989
NaeI GCCGGC 1 cut(s) 684
NciI CCSGG 2 cut(s) 84, 99
NdeII GATC 5 cut(s) 101, 157, 246, 325, 665
NgoMIV GCCGGC 1 cut(s) 682
NlaIII CATG 4 cut(s) 29, 325, 871, 1079
NlaIV GGNNCC 3 cut(s) 62, 327, 1130
NmuCI GTSAC 1 cut(s) 797
NspV TTCGAA 1 cut(s) 15
PauI GCGCGC 1 cut(s) 1195
PctI GAATGC 2 cut(s) 1027, 1063
PdiI GCCGGC 1 cut(s) 684
PfeI GAWTC 3 cut(s) 590, 655, 761
PflMI CCANNNNNTGG 1 cut(s) 259
PkrI GCNGC 5 cut(s) 355, 690, 753, 964, 1038
PleI GAGTC 1 cut(s) 800
PmaCI CACGTG 2 cut(s) 201, 244
PmlI CACGTG 2 cut(s) 201, 244
PpsI GAGTC 1 cut(s) 800
Ppu21I YACGTR 2 cut(s) 201, 244
PpuMI RGGWCCY 2 cut(s) 61, 1128
PshBI ATTAAT 1 cut(s) 582
Psp5II RGGWCCY 2 cut(s) 61, 1128
Psp6I CCWGG 4 cut(s) 63, 574, 993, 1217
PspCI CACGTG 2 cut(s) 201, 244
PspFI CCCAGC 3 cut(s) 522, 818, 947
PspGI CCWGG 4 cut(s) 63, 574, 993, 1217
PspN4I GGNNCC 3 cut(s) 62, 327, 1130
PspPI GGNCC 4 cut(s) 61, 632, 1128, 1215
PspPPI RGGWCCY 2 cut(s) 61, 1128
PsuI RGATCY 2 cut(s) 325, 665
PteI GCGCGC 1 cut(s) 1195
RsaI GTAC 3 cut(s) 389, 647, 893
RsaNI GTAC 3 cut(s) 388, 646, 892
SaqAI TTAA 4 cut(s) 582, 677, 1008, 1070
SatI GCNGC 5 cut(s) 354, 689, 752, 963, 1037
Sau3AI GATC 5 cut(s) 101, 157, 246, 325, 665
Sau96I GGNCC 4 cut(s) 61, 632, 1128, 1215
SchI GAGTC 1 cut(s) 800
ScrFI CCNGG 6 cut(s) 65, 84, 99, 576, 995, 1219
SduI GDGCHC 1 cut(s) 1158
SfaNI GCATC 1 cut(s) 903
SfuI TTCGAA 1 cut(s) 15
SinI GGWCC 3 cut(s) 61, 632, 1128
Sse9I AATT 6 cut(s) 274, 332, 583, 729, 850, 861
SsiI CCGC 6 cut(s) 68, 213, 351, 354, 752, 831
SspMI CTAG 2 cut(s) 669, 999
StyD4I CCNGG 6 cut(s) 63, 82, 97, 574, 993, 1217
TaaI ACNGT 2 cut(s) 636, 1207
TaiI ACGT 2 cut(s) 203, 246
TaqI TCGA 5 cut(s) 15, 249, 423, 653, 873
TasI AATT 6 cut(s) 274, 332, 583, 729, 850, 861
TauI GCSGC 2 cut(s) 356, 754
TfiI GAWTC 3 cut(s) 590, 655, 761
Tru1I TTAA 4 cut(s) 582, 677, 1008, 1070
Tru9I TTAA 4 cut(s) 582, 677, 1008, 1070
TscAI CASTG 1 cut(s) 927
TseFI GTSAC 1 cut(s) 797
TseI GCWGC 3 cut(s) 688, 962, 1036
Tsp45I GTSAC 1 cut(s) 797
TspDTI ATGAA 5 cut(s) 141, 163, 1091, 1092, 1124
TspGWI ACGGA 1 cut(s) 1233
TspRI CASTG 1 cut(s) 927
Van91I CCANNNNNTGG 1 cut(s) 259
VpaK11BI GGWCC 3 cut(s) 61, 632, 1128
VspI ATTAAT 1 cut(s) 582
XapI RAATTY 2 cut(s) 729, 850
XspI CTAG 2 cut(s) 669, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.