Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0010365

Physical Location & Seq

Genomic Coordinates Forward (+)

11618104 .. 11622231

Gene Structure 4128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG136800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGGCTGAGGGTTTTGAGCCCTACCATGTCCCTCAACAAAGCAGAAGAGATAAGCTCCGGTTCTTGCCGGGTCAACCCCACCCGGTTTGTGAAGAACCCGGACCTCACCACCTTCACGGTTGTGCTGCTGCTGCTTTCTATGATCCGACCTCAATCTCACTCATCTCCTCATCAGATTTGCTCACGTGCGCCGGCAGCTCCGTCAAAGGAGAGGGCCACGTGAATCTGATGGGTTACATGAACACTTCTACAGCTTCCTCGTCTTTAAACAATTTTCGCCATCCCTACTTGGATCCTCAACCTTCGAATTTCGCACCGAATCCCAACTCTGTCCATGATATTAACGGTCTCAACAACATGTTTCTTTATCCGAGCCAACAGAATCATCATCATCTGAGAGACTTCCACGATGAAGCAGCTGTACTGTTCAAACCGGAACCATTGTCCTTGTCACTATCTTCACAACCCGTTGAGGTCCATAATCTGCAGAGGTACGGCTATTCGGGCATTAACGACGGTGGTCACGGGTCTAGAAGTCCGGGCCCAACTCCGCTGGGGCCGTTTACCGGCTACGCTTCGATTTTGAAGGGATCGAGGTTCTTGAAGCCAGCTCAGCAGTTGCTAGAGGAGTTCTGTGATGTGGGTAGTTCTAGTCGTGAAATTTATGCTGCTGTTAGCAGAATTATGACAGACGAGTCCTCATCCTTTTTGGACGATCCTCCTATTGAGAGCTTGGACGATCCGGTCAGTGTTGGCGGCGGTGACGGAAGTGAGAGTCGGAGAAAGAAGTCGAGGCTGATTTCCATGCTAGACGAGGTTTACAGGAGGTACAAGCAATACTATCACCAGATGACAGCAGTAGTGAACTCATTTGAGTATGTTGCTGGGCTTGGAAATGCAGCTCCCTATGCAAACTTGGCAATAAAGGCCATGAGTAGACACTTTACGTGTTTGAAGAATGCGATCACTGATCAGCTTCAATATTCAAGATCAAGTAGGGATGCTACAACTTTTGTAAGCCGGGACAAAGATGAAGCTATTCCAATGCTCCGTAATACTACTCGAGGCATGTATACCCAGCACAGATCTTTCCAAAGCACGGAGTTTGGCGAGCACCAACCTGTTTGGCGACCTCAAAGGGGCCTTCCTGAGCGTGCAGTTACCGTTCTTAGGTCCTGGTTGTTCGAACACTTCTTGCATCCTTACCCTACCGATACAGATAAAATAATGCTGGCTAAACAAACTGGCCTATCACGAAGCCAGGTGTGTGCCTATATTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0010016 GO:0010051 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010087 GO:0010089 GO:0010154 GO:0010223 GO:0010228 GO:0010346 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048367 GO:0048438 GO:0048439 GO:0048457 GO:0048507 GO:0048519 GO:0048523 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0080006 GO:0080090 GO:0090567 GO:0090698 GO:0097159 GO:0098727 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905393 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

427

Amino Acids

47.68

Weight (kDa)

6.7

Isoelectric Point (pI)

57.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	194 - 323	1.8e-39	Associated with HOX
Homeobox_KN	PF05920	393 - 427	5.8e-12	Homeobox KN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02030
fragaria_vesca	FvH4_6g12810 FvH4_6g12810 FvH4_6g12810 FvH4_6g12810
malus_domestica	MD04G1138100.v1.1 MD12G1153600.v1.1
prunus_persica	Prupe.6G263900_v2.0.a1 Prupe.6G263900_v2.0.a1 Prupe.6G263900_v2.0.a1
pyrus_communis	pycom04g12630 pycom12g14630
rosa_chinensis	RchiOBHm_Chr3g0464821
rosa_laevigata	RLG00000024672
rosa_multiflora	Rmu_sc0007114.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415420
rosa_rugosa	Rorug03G0074100.1
rosa_samantha	Rh3BG136800 Rh3CG139400 Rh3DG138200
rosa_wichuraiana	Rw3G011180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	694, 743
AccI	GTMKAC	2 cut(s)	937, 1073
AciI	CCGC	3 cut(s)	551, 756, 759
AclWI	GGATC	6 cut(s)	137, 287, 300, 598, 710, 734
AcsI	RAATTY	2 cut(s)	307, 660
AcvI	CACGTG	2 cut(s)	186, 220
AfaI	GTAC	3 cut(s)	423, 494, 830
AfiI	CCNNNNNNNGG	4 cut(s)	566, 1099, 1139, 1170
AflIII	ACRYGT	2 cut(s)	357, 947
AgsI	TTSAA	6 cut(s)	430, 586, 604, 955, 980, 987
AjnI	CCWGG	2 cut(s)	1175, 1260
AleI	CACNNNNGTG	1 cut(s)	120
AluBI	AGCT	9 cut(s)	55, 198, 254, 419, 611, 732, 902, 976, 1037
AluI	AGCT	9 cut(s)	55, 198, 254, 419, 611, 732, 902, 976, 1037
Alw21I	GWGCWC	1 cut(s)	1116
Alw26I	GTCTC	2 cut(s)	353, 393
AlwI	GGATC	6 cut(s)	137, 287, 300, 598, 710, 734
Ama87I	CYCGRG	1 cut(s)	1062
AoxI	GGCC	6 cut(s)	214, 541, 557, 927, 1141, 1246
ApaI	GGGCCC	1 cut(s)	545
ApeKI	GCWGC	7 cut(s)	125, 128, 131, 195, 416, 668, 899
ApoI	RAATTY	2 cut(s)	307, 660
Asp700I	GAANNNNTTC	1 cut(s)	1038
AspLEI	GCGC	1 cut(s)	191
AspS9I	GGNCC	8 cut(s)	101, 214, 475, 541, 542, 557, 1141, 1173
AsuC2I	CCSGG	5 cut(s)	69, 83, 99, 540, 1022
AsuHPI	GGTGA	3 cut(s)	98, 773, 836
AsuII	TTCGAA	2 cut(s)	305, 1185
AvaI	CYCGRG	1 cut(s)	1062
AvaII	GGWCC	3 cut(s)	101, 475, 1173
BaeGI	GKGCMC	1 cut(s)	545
BamHI	GGATCC	1 cut(s)	292
BanII	GRGCYC	2 cut(s)	21, 545
BarI	GAAGNNNNNNTAC	2 cut(s)	405, 437
BbrPI	CACGTG	2 cut(s)	186, 220
Bbv12I	GWGCWC	1 cut(s)	1116
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	7 cut(s)	112, 115, 118, 207, 428, 655, 911
BccI	CCATC	2 cut(s)	223, 288
BceAI	ACGGC	2 cut(s)	511, 544
BciT130I	CCWGG	2 cut(s)	1177, 1262
BclI	TGATCA	1 cut(s)	970
BcnI	CCSGG	5 cut(s)	69, 83, 99, 540, 1022
BcoDI	GTCTC	2 cut(s)	353, 393
BfaI	CTAG	4 cut(s)	531, 623, 651, 809
BfmI	CTRYAG	2 cut(s)	249, 485
BglII	AGATCT	1 cut(s)	1085
BisI	GCNGC	8 cut(s)	126, 129, 132, 196, 417, 669, 757, 900
BlpI	GCTNAGC	1 cut(s)	612
BlsI	GCNGC	8 cut(s)	127, 130, 133, 197, 418, 670, 758, 901
Bme1390I	CCNGG	7 cut(s)	69, 83, 99, 540, 1022, 1177, 1262
Bme18I	GGWCC	3 cut(s)	101, 475, 1173
BmeT110I	CYCGRG	1 cut(s)	1062
BmgT120I	GGNCC	8 cut(s)	101, 214, 475, 541, 542, 557, 1141, 1173
BmiI	GGNNCC	5 cut(s)	294, 438, 543, 558, 1142
BmrFI	CCNGG	7 cut(s)	69, 83, 99, 540, 1022, 1177, 1262
BmsI	GCATC	2 cut(s)	991, 1207
BoxI	GACNNNNGTC	1 cut(s)	519
BplI	GAGNNNNNCTC	2 cut(s)	39, 71
Bpu10I	CCTNAGC	2 cut(s)	6, 1149
Bpu1102I	GCTNAGC	1 cut(s)	612
Bpu14I	TTCGAA	2 cut(s)	305, 1185
BpuMI	CCSGG	5 cut(s)	69, 83, 99, 540, 1022
BsaAI	YACGTR	3 cut(s)	186, 220, 948
BsaI	GGTCTC	1 cut(s)	353
BsaWI	WCCGGW	3 cut(s)	57, 433, 742
Bsc4I	CCNNNNNNNGG	4 cut(s)	566, 1099, 1139, 1170
Bse118I	RCCGGY	2 cut(s)	191, 566
Bse1I	ACTGG	1 cut(s)	1249
BseBI	CCWGG	2 cut(s)	1177, 1262
BseGI	GGATG	4 cut(s)	280, 701, 1006, 1198
BseLI	CCNNNNNNNGG	4 cut(s)	566, 1099, 1139, 1170
BseMII	CTCAG	3 cut(s)	386, 626, 1140
BseNI	ACTGG	1 cut(s)	1249
BseRI	GAGGAG	2 cut(s)	157, 641
BseSI	GKGCMC	1 cut(s)	545
BseXI	GCAGC	7 cut(s)	112, 115, 118, 207, 428, 655, 911
BseYI	CCCAGC	3 cut(s)	553, 884, 1077
BsgI	GTGCAG	1 cut(s)	1176
BshFI	GGCC	6 cut(s)	216, 543, 559, 929, 1143, 1248
BsiHKAI	GWGCWC	1 cut(s)	1116
BsiHKCI	CYCGRG	1 cut(s)	1062
BslFI	GGGAC	2 cut(s)	14, 1037
BslI	CCNNNNNNNGG	4 cut(s)	566, 1099, 1139, 1170
BsmAI	GTCTC	2 cut(s)	353, 393
BsmFI	GGGAC	2 cut(s)	14, 1037
BsmI	GAATGC	1 cut(s)	964
BsnI	GGCC	6 cut(s)	216, 543, 559, 929, 1143, 1248
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	1 cut(s)	1062
Bsp119I	TTCGAA	2 cut(s)	305, 1185
Bsp120I	GGGCCC	1 cut(s)	541
Bsp1286I	GDGCHC	3 cut(s)	21, 545, 1116
Bsp143I	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
Bsp1720I	GCTNAGC	1 cut(s)	612
BspACI	CCGC	3 cut(s)	551, 756, 759
BspANI	GGCC	6 cut(s)	216, 543, 559, 929, 1143, 1248
BspCNI	CTCAG	3 cut(s)	387, 625, 1141
BspLI	GGNNCC	5 cut(s)	294, 438, 543, 558, 1142
BspMAI	CTGCAG	1 cut(s)	489
BspPI	GGATC	6 cut(s)	137, 287, 300, 598, 710, 734
BspT104I	TTCGAA	2 cut(s)	305, 1185
BspTNI	GGTCTC	1 cut(s)	353
BsrFI	RCCGGY	2 cut(s)	191, 566
BsrI	ACTGG	1 cut(s)	1249
BssAI	RCCGGY	2 cut(s)	191, 566
BssMI	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
BssNAI	GTATAC	1 cut(s)	1074
Bst1107I	GTATAC	1 cut(s)	1074
Bst2UI	CCWGG	2 cut(s)	1177, 1262
Bst4CI	ACNGT	5 cut(s)	119, 347, 426, 518, 1165
Bst6I	CTCTTC	1 cut(s)	40
BstBAI	YACGTR	3 cut(s)	186, 220, 948
BstBI	TTCGAA	2 cut(s)	305, 1185
BstC8I	GCNNGC	5 cut(s)	193, 609, 1112, 1155, 1233
BstDEI	CTNAG	5 cut(s)	6, 395, 612, 1149, 1169
BstF5I	GGATG	4 cut(s)	280, 701, 1006, 1198
BstHHI	GCGC	1 cut(s)	191
BstKTI	GATC	9 cut(s)	145, 295, 593, 718, 742, 966, 973, 992, 1088
BstMAI	GTCTC	2 cut(s)	353, 393
BstMBI	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
BstMWI	GCNNNNNNNGC	7 cut(s)	131, 195, 504, 613, 908, 917, 926
BstNI	CCWGG	2 cut(s)	1177, 1262
BstNSI	RCATGY	2 cut(s)	361, 1072
BstPAI	GACNNNNGTC	1 cut(s)	519
BstSCI	CCNGG	7 cut(s)	67, 81, 97, 538, 1020, 1175, 1260
BstSFI	CTRYAG	2 cut(s)	249, 485
BstSLI	GKGCMC	1 cut(s)	545
BstV1I	GCAGC	7 cut(s)	112, 115, 118, 207, 428, 655, 911
BstX2I	RGATCY	2 cut(s)	292, 1085
BstYI	RGATCY	2 cut(s)	292, 1085
BstZ17I	GTATAC	1 cut(s)	1074
BsuRI	GGCC	6 cut(s)	216, 543, 559, 929, 1143, 1248
BtsCI	GGATG	4 cut(s)	280, 701, 1006, 1198
BtsIMutI	CAGTG	2 cut(s)	754, 966
Cac8I	GCNNGC	5 cut(s)	193, 609, 1112, 1155, 1233
CfoI	GCGC	1 cut(s)	191
Cfr10I	RCCGGY	2 cut(s)	191, 566
Cfr13I	GGNCC	8 cut(s)	101, 214, 475, 541, 542, 557, 1141, 1173
Csp6I	GTAC	3 cut(s)	422, 493, 829
CspCI	CAANNNNNGTGG	2 cut(s)	68, 103
CviAII	CATG	7 cut(s)	26, 238, 335, 358, 805, 931, 1069
CviQI	GTAC	3 cut(s)	422, 493, 829
DdeI	CTNAG	5 cut(s)	6, 395, 612, 1149, 1169
DpnI	GATC	9 cut(s)	144, 294, 592, 717, 741, 965, 972, 991, 1087
DpnII	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
DraI	TTTAAA	1 cut(s)	267
DrdI	GACNNNNNNGTC	2 cut(s)	694, 743
DseDI	GACNNNNNNGTC	2 cut(s)	694, 743
Eam1104I	CTCTTC	1 cut(s)	40
EarI	CTCTTC	1 cut(s)	40
Eco24I	GRGCYC	2 cut(s)	21, 545
Eco31I	GGTCTC	1 cut(s)	353
Eco47I	GGWCC	3 cut(s)	101, 475, 1173
Eco72I	CACGTG	2 cut(s)	186, 220
Eco88I	CYCGRG	1 cut(s)	1062
EcoO109I	RGGNCCY	2 cut(s)	1141, 1173
EcoRII	CCWGG	2 cut(s)	1175, 1260
EcoT38I	GRGCYC	2 cut(s)	21, 545
FaeI	CATG	7 cut(s)	29, 241, 338, 361, 808, 934, 1072
FaqI	GGGAC	2 cut(s)	14, 1037
FatI	CATG	7 cut(s)	25, 237, 334, 357, 804, 930, 1068
FbaI	TGATCA	1 cut(s)	970
FblI	GTMKAC	2 cut(s)	937, 1073
Fnu4HI	GCNGC	8 cut(s)	126, 129, 132, 196, 417, 669, 757, 900
FokI	GGATG	4 cut(s)	267, 688, 1013, 1185
FriOI	GRGCYC	2 cut(s)	21, 545
Fsp4HI	GCNGC	8 cut(s)	126, 129, 132, 196, 417, 669, 757, 900
FspBI	CTAG	4 cut(s)	531, 623, 651, 809
GlaI	GCGC	1 cut(s)	190
GluI	GCNGC	8 cut(s)	126, 129, 132, 196, 417, 669, 757, 900
GsaI	CCCAGC	3 cut(s)	557, 888, 1081
HaeIII	GGCC	6 cut(s)	216, 543, 559, 929, 1143, 1248
HhaI	GCGC	1 cut(s)	191
Hin1II	CATG	7 cut(s)	29, 241, 338, 361, 808, 934, 1072
Hin6I	GCGC	1 cut(s)	189
HinP1I	GCGC	1 cut(s)	189
HincII	GTYRAC	1 cut(s)	74
HindII	GTYRAC	1 cut(s)	74
HinfI	GANTC	5 cut(s)	223, 319, 382, 695, 775
HphI	GGTGA	3 cut(s)	98, 773, 836
Hpy166II	GTNNAC	6 cut(s)	74, 564, 820, 865, 938, 1074
Hpy188I	TCNGA	6 cut(s)	147, 175, 228, 372, 396, 780
Hpy188III	TCNNGA	6 cut(s)	531, 601, 656, 987, 1148, 1254
Hpy8I	GTNNAC	6 cut(s)	74, 564, 820, 865, 938, 1074
Hpy99I	CGWCG	1 cut(s)	518
HpyAV	CCTTC	4 cut(s)	122, 312, 580, 1154
HpyCH4III	ACNGT	5 cut(s)	119, 347, 426, 518, 1165
HpyCH4IV	ACGT	3 cut(s)	185, 219, 947
HpyCH4V	TGCA	5 cut(s)	487, 899, 911, 1157, 1198
HpyF10VI	GCNNNNNNNGC	7 cut(s)	131, 195, 504, 613, 908, 917, 926
HpyF3I	CTNAG	5 cut(s)	6, 395, 612, 1149, 1169
HpySE526I	ACGT	3 cut(s)	185, 219, 947
Hsp92II	CATG	7 cut(s)	29, 241, 338, 361, 808, 934, 1072
HspAI	GCGC	1 cut(s)	189
KroI	GCCGGC	1 cut(s)	191
KroNI	GCCGGC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	970
Kzo9I	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
LmnI	GCTCC	4 cut(s)	60, 203, 907, 1053
Lsp1109I	GCAGC	7 cut(s)	112, 115, 118, 207, 428, 655, 911
LweI	GCATC	2 cut(s)	991, 1207
MaeI	CTAG	4 cut(s)	531, 623, 651, 809
MaeII	ACGT	3 cut(s)	185, 219, 947
MaeIII	GTNAC	5 cut(s)	233, 450, 521, 761, 1159
MalI	GATC	9 cut(s)	144, 294, 592, 717, 741, 965, 972, 991, 1087
MboI	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
MboII	GAAGA	4 cut(s)	57, 104, 450, 967
MflI	RGATCY	2 cut(s)	292, 1085
MhlI	GDGCHC	3 cut(s)	21, 545, 1116
MluCI	AATT	4 cut(s)	271, 307, 660, 681
MlyI	GAGTC	2 cut(s)	704, 784
MmeI	TCCRAC	2 cut(s)	170, 758
MroNI	GCCGGC	1 cut(s)	191
MroXI	GAANNNNTTC	1 cut(s)	1038
MseI	TTAA	3 cut(s)	266, 342, 510
MslI	CAYNNNNRTG	1 cut(s)	120
MspA1I	CMGCKG	2 cut(s)	419, 553
MspR9I	CCNGG	7 cut(s)	69, 83, 99, 540, 1022, 1177, 1262
Mva1269I	GAATGC	1 cut(s)	964
MvaI	CCWGG	2 cut(s)	1177, 1262
MwoI	GCNNNNNNNGC	7 cut(s)	131, 195, 504, 613, 908, 917, 926
NaeI	GCCGGC	1 cut(s)	193
NciI	CCSGG	5 cut(s)	69, 83, 99, 540, 1022
NdeII	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
NgoMIV	GCCGGC	1 cut(s)	191
NlaIII	CATG	7 cut(s)	29, 241, 338, 361, 808, 934, 1072
NlaIV	GGNNCC	5 cut(s)	294, 438, 543, 558, 1142
NmuCI	GTSAC	3 cut(s)	450, 521, 761
NspI	RCATGY	2 cut(s)	361, 1072
NspV	TTCGAA	2 cut(s)	305, 1185
OliI	CACNNNNGTG	1 cut(s)	120
PaeR7I	CTCGAG	1 cut(s)	1062
PciI	ACATGT	1 cut(s)	357
PctI	GAATGC	1 cut(s)	964
PdiI	GCCGGC	1 cut(s)	193
PdmI	GAANNNNTTC	1 cut(s)	1038
PfeI	GAWTC	3 cut(s)	223, 319, 382
PkrI	GCNGC	8 cut(s)	127, 130, 133, 197, 418, 670, 758, 901
PleI	GAGTC	2 cut(s)	703, 783
PmaCI	CACGTG	2 cut(s)	186, 220
PmlI	CACGTG	2 cut(s)	186, 220
PpsI	GAGTC	2 cut(s)	703, 783
Ppu21I	YACGTR	3 cut(s)	186, 220, 948
PpuMI	RGGWCCY	1 cut(s)	1173
PscI	ACATGT	1 cut(s)	357
PshAI	GACNNNNGTC	1 cut(s)	519
Psp5II	RGGWCCY	1 cut(s)	1173
Psp6I	CCWGG	2 cut(s)	1175, 1260
PspCI	CACGTG	2 cut(s)	186, 220
PspFI	CCCAGC	3 cut(s)	553, 884, 1077
PspGI	CCWGG	2 cut(s)	1175, 1260
PspN4I	GGNNCC	5 cut(s)	294, 438, 543, 558, 1142
PspOMI	GGGCCC	1 cut(s)	541
PspPI	GGNCC	8 cut(s)	101, 214, 475, 541, 542, 557, 1141, 1173
PspPPI	RGGWCCY	1 cut(s)	1173
PspXI	VCTCGAGB	1 cut(s)	1062
PstI	CTGCAG	1 cut(s)	489
PsuI	RGATCY	2 cut(s)	292, 1085
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	3 cut(s)	423, 494, 830
RsaNI	GTAC	3 cut(s)	422, 493, 829
RseI	CAYNNNNRTG	1 cut(s)	120
SaqAI	TTAA	3 cut(s)	266, 342, 510
SatI	GCNGC	8 cut(s)	126, 129, 132, 196, 417, 669, 757, 900
Sau3AI	GATC	9 cut(s)	142, 292, 590, 715, 739, 963, 970, 989, 1085
Sau96I	GGNCC	8 cut(s)	101, 214, 475, 541, 542, 557, 1141, 1173
SchI	GAGTC	2 cut(s)	704, 784
ScrFI	CCNGG	7 cut(s)	69, 83, 99, 540, 1022, 1177, 1262
SduI	GDGCHC	3 cut(s)	21, 545, 1116
SfaNI	GCATC	2 cut(s)	991, 1207
SfcI	CTRYAG	2 cut(s)	249, 485
Sfr274I	CTCGAG	1 cut(s)	1062
SfuI	TTCGAA	2 cut(s)	305, 1185
SinI	GGWCC	3 cut(s)	101, 475, 1173
SlaI	CTCGAG	1 cut(s)	1062
SmiMI	CAYNNNNRTG	1 cut(s)	120
SmlI	CTYRAG	1 cut(s)	1062
SmoI	CTYRAG	1 cut(s)	1062
Sse9I	AATT	4 cut(s)	271, 307, 660, 681
SsiI	CCGC	3 cut(s)	551, 756, 759
SspI	AATATT	1 cut(s)	983
SspMI	CTAG	4 cut(s)	531, 623, 651, 809
StyD4I	CCNGG	7 cut(s)	67, 81, 97, 538, 1020, 1175, 1260
TaaI	ACNGT	5 cut(s)	119, 347, 426, 518, 1165
TaiI	ACGT	3 cut(s)	188, 222, 950
TaqI	TCGA	6 cut(s)	305, 578, 593, 791, 1063, 1185
TasI	AATT	4 cut(s)	271, 307, 660, 681
TatI	WGTACW	1 cut(s)	421
TauI	GCSGC	1 cut(s)	759
TfiI	GAWTC	3 cut(s)	223, 319, 382
Tru1I	TTAA	3 cut(s)	266, 342, 510
Tru9I	TTAA	3 cut(s)	266, 342, 510
TscAI	CASTG	2 cut(s)	754, 973
TseFI	GTSAC	3 cut(s)	450, 521, 761
TseI	GCWGC	7 cut(s)	125, 128, 131, 195, 416, 668, 899
Tsp45I	GTSAC	3 cut(s)	450, 521, 761
TspDTI	ATGAA	3 cut(s)	254, 426, 1047
TspGWI	ACGGA	4 cut(s)	190, 780, 1040, 1115
TspRI	CASTG	2 cut(s)	754, 973
VpaK11BI	GGWCC	3 cut(s)	101, 475, 1173
XapI	RAATTY	2 cut(s)	307, 660
XbaI	TCTAGA	1 cut(s)	530
XceI	RCATGY	2 cut(s)	361, 1072
XhoI	CTCGAG	1 cut(s)	1062
XmiI	GTMKAC	2 cut(s)	937, 1073
XmnI	GAANNNNTTC	1 cut(s)	1038
XspI	CTAG	4 cut(s)	531, 623, 651, 809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.