Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0010365

Physical Location & Seq

Genomic Coordinates Reverse (-)

15566031 .. 15574950

Gene Structure 8920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g12630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGGCTGAGGGTTTCGAACCCTACCATGTGCCTCAACAGAGCAGAAGGGACAAGCTCAGGGTCCTGGCGGGTCAAACCCACCCGGGTTGCCTCCAACCCGGATCAGCATCTCCTCCACCTCCACATCTCCACCATGCTTTGCTCCCTCTTTCATACGATCCCACCACCACCTTCATCTCCTCTTCCTCAGGTTTGCTCACGTGCGCCGACCTCGACGTGAAAGAAGAGGGTAGTCATCATCACGTGATCGACCACTTGATGGGTTTTGCTTCCAATTCCACCTCCTCTTCTACTTTTCGCCACAACAACCACCACCATCCCTACATGGATCCACAATTCCCTCTCACTCCCACCGCCGCCGTTCAAGAAATCAACCCATTTCTGTACCCCCCTCAAAACCTCCACCCCCTCAGAGATTTCGACCACCAGCAACCTCCCTACGACAATCAAGTAGTCGTCTTCAAACCAGAGCCTCTCTCTTTGTCCCTCTCTTCTTCCCAACCCACCAACCACCACTCCCAGCACACCCAGCAAACCCAGAACAACACAAACAACAACAATCTCCAGAGATTTTCTTCGCCTGGGATTAATTATGATTCACTAAATTCTGGCGTTAGTGTTGCTTTTGTCCCTTTTGGACCGTTCACGGGGTACGCTTCGATTCTAAAGCGATCTAGGTTTTTAAAGCCGGCGCAGCATTTGCTGGAGGAGTTTTGCGATGTGGGCAGTCGTGAAATTTACACCGCGAAAGTCTTGACGCTGGAGGATTCCTCCTTTTTTGACCCTCCTATTGAGAGCTTTGGTGACGACGACTCACAGATGGCTGGGGGAGACGGCGGTGAGAGTAGAAGGCAAAATTCCAGACTAATTTCCATGCTCGACGAGGTTTATAGGAGGTACAAGCAATACTATCAACAGATGCAGGCAGTGGCAAGGTCATTTGAGTATGTTGCTGGGCTTGGAAATGCAGCTCCTTATGCAAACTTAGCAATAAAAGCCATGGCTAGACATTTTAAGTGTTTGAAGAATGCTATCACCGAGCAGCTTCACTTTAGAAGTCGGAATGCTACTCATTTAAGACATGAAAAAGATGGAATTCCAATGCTTCATAGCAGAAGTGCATATGGCCAGAGGTCCCTTCATAACTCTGAGTTTGTGGAGCACCAGCCTGTGTGGAGACCACAAAGGGGTCTTCCTGAGCGCGCCGTTACTGTTCTTAGGGCCTGGTTGTTTGAACACTTCCTGCATCCTTATCCTACCGACTCGGATAAATTAACGTTGGCTAAACAAACTGGTCTATCACGAAGCCAGGTTTCAAATTGGTTTATTAATGCAAGAGTAAGGCTATGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACACGGCAAGCCCAAAAAGATTCGCAAAGGGTGGATTTAAGTTCCAATAGGTCAAGTGATGATCATTTACCTTCGTCAAACTCAATTGGATCCGAGAATCCATCCACATCCACCCATAGGGTTCAAGACACCGCATCTAAGCGCACCAGAAGAGAACTTCATGATCATATCACTTTAATGGAGGCTACTGAACAAAACGTATCTTACAATAATTTTCCAAGCCATATGCATGTAGGTCATGTTGGTATGAACATGGCAGGGGCGAGTAGTAGTGGTGTGTCTCTAACCCTGGGACTTCACCAAAATAATGGCAATGGTTTTTCAGATCCCTTTCCTATCAATGCAGCTCAACGTTTTGGCCTCGGTCTTGACGGCAGCAGTGAGAACTATGCAATGGGTGGTTTCGAAGCACAAAATCGGCATTTTGGAAGGGATGTCATGGGAGGGCAATTTTTGCACGATTTTGTTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0010016 GO:0010051 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010087 GO:0010089 GO:0010154 GO:0010223 GO:0010228 GO:0010346 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048367 GO:0048438 GO:0048439 GO:0048457 GO:0048507 GO:0048519 GO:0048523 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0080006 GO:0080090 GO:0090567 GO:0090698 GO:0097159 GO:0098727 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905393 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

619

Amino Acids

69.38

Weight (kDa)

6.71

Isoelectric Point (pI)

57.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	221 - 346	1.5e-36	Associated with HOX
Homeobox_KN	PF05920	409 - 448	1.8e-19	Homeobox KN domain
Homeodomain	PF00046	416 - 448	7.2e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02030
fragaria_vesca	FvH4_6g12810 FvH4_6g12810 FvH4_6g12810 FvH4_6g12810
malus_domestica	MD04G1138100.v1.1 MD12G1153600.v1.1
prunus_persica	Prupe.6G263900_v2.0.a1 Prupe.6G263900_v2.0.a1 Prupe.6G263900_v2.0.a1
pyrus_communis	pycom04g12630 pycom12g14630
rosa_chinensis	RchiOBHm_Chr3g0464821
rosa_laevigata	RLG00000024672
rosa_multiflora	Rmu_sc0007114.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415420
rosa_rugosa	Rorug03G0074100.1
rosa_samantha	Rh3BG136800 Rh3CG139400 Rh3DG138200
rosa_wichuraiana	Rw3G011180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	259
AccII	CGCG	2 cut(s)	746, 1203
AciI	CCGC	6 cut(s)	68, 354, 357, 744, 837, 1515
AclI	AACGTT	2 cut(s)	1277, 1735
AclWI	GGATC	7 cut(s)	109, 152, 323, 336, 1467, 1480, 1703
AcoI	YGGCCR	1 cut(s)	1126
AcsI	RAATTY	4 cut(s)	604, 735, 856, 1095
AcvI	CACGTG	2 cut(s)	201, 244
AfaI	GTAC	3 cut(s)	386, 653, 899
AfiI	CCNNNNNNNGG	4 cut(s)	259, 647, 1187, 1500
AgsI	TTSAA	6 cut(s)	365, 463, 1024, 1235, 1317, 1508
AjiI	CACGTC	1 cut(s)	217
AjnI	CCWGG	5 cut(s)	63, 580, 1223, 1308, 1671
AluBI	AGCT	5 cut(s)	55, 798, 971, 1045, 1730
AluI	AGCT	5 cut(s)	55, 798, 971, 1045, 1730
Alw21I	GWGCWC	1 cut(s)	1164
Alw26I	GTCTC	3 cut(s)	825, 1171, 1668
AlwI	GGATC	7 cut(s)	109, 152, 323, 336, 1467, 1480, 1703
Ama87I	CYCGRG	1 cut(s)	82
AoxI	GGCC	3 cut(s)	1126, 1221, 1741
ApeKI	GCWGC	5 cut(s)	694, 968, 1042, 1727, 1758
ApoI	RAATTY	4 cut(s)	604, 735, 856, 1095
AseI	ATTAAT	2 cut(s)	588, 1329
AspLEI	GCGC	5 cut(s)	206, 694, 1203, 1205, 1527
AspS9I	GGNCC	4 cut(s)	61, 638, 1134, 1221
AsuC2I	CCSGG	3 cut(s)	83, 84, 99
AsuHPI	GGTGA	4 cut(s)	815, 851, 1027, 1673
AsuII	TTCGAA	2 cut(s)	15, 1788
AvaI	CYCGRG	1 cut(s)	82
AvaII	GGWCC	3 cut(s)	61, 638, 1134
AxyI	CCTNAGG	1 cut(s)	187
BalI	TGGCCA	1 cut(s)	1128
BamHI	GGATCC	2 cut(s)	328, 1472
BbrPI	CACGTG	2 cut(s)	201, 244
BbsI	GAAGAC	2 cut(s)	451, 1184
Bbv12I	GWGCWC	1 cut(s)	1164
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	5 cut(s)	706, 980, 1054, 1739, 1770
BccI	CCATC	5 cut(s)	253, 324, 814, 1085, 1492
BceAI	ACGGC	5 cut(s)	344, 850, 1190, 1403, 1771
BciT130I	CCWGG	5 cut(s)	65, 582, 1225, 1310, 1673
BclI	TGATCA	2 cut(s)	1444, 1546
BcnI	CCSGG	3 cut(s)	83, 84, 99
BcoDI	GTCTC	3 cut(s)	825, 1171, 1668
BfaI	CTAG	3 cut(s)	675, 1005, 1379
BisI	GCNGC	6 cut(s)	357, 695, 969, 1043, 1728, 1759
BlsI	GCNGC	6 cut(s)	358, 696, 970, 1044, 1729, 1760
Bme1390I	CCNGG	8 cut(s)	65, 83, 84, 99, 582, 1225, 1310, 1673
Bme18I	GGWCC	3 cut(s)	61, 638, 1134
BmeT110I	CYCGRG	1 cut(s)	82
BmgBI	CACGTC	1 cut(s)	217
BmgT120I	GGNCC	4 cut(s)	61, 638, 1134, 1221
BmiI	GGNNCC	4 cut(s)	62, 330, 1136, 1474
BmrFI	CCNGG	8 cut(s)	65, 83, 84, 99, 582, 1225, 1310, 1673
BmsI	GCATC	4 cut(s)	116, 909, 1255, 1526
BpiI	GAAGAC	2 cut(s)	451, 1184
BplI	GAGNNNNNCTC	4 cut(s)	461, 493, 755, 787
BpmI	CTGGAG	3 cut(s)	548, 725, 782
Bpu10I	CCTNAGC	3 cut(s)	6, 56, 1197
Bpu14I	TTCGAA	2 cut(s)	15, 1788
BpuMI	CCSGG	3 cut(s)	83, 84, 99
BsaAI	YACGTR	2 cut(s)	201, 244
BsaBI	GATNNNNATC	1 cut(s)	106
BsaI	GGTCTC	1 cut(s)	1171
BsaJI	CCNNGG	6 cut(s)	82, 581, 999, 1671, 1672, 1744
BsaXI	ACNNNNNCTCC	2 cut(s)	500, 530
Bsc4I	CCNNNNNNNGG	4 cut(s)	259, 647, 1187, 1500
Bse118I	RCCGGY	1 cut(s)	688
Bse1I	ACTGG	1 cut(s)	1297
Bse21I	CCTNAGG	1 cut(s)	187
Bse3DI	GCAATG	2 cut(s)	1702, 1782
Bse8I	GATNNNNATC	1 cut(s)	106
BseBI	CCWGG	5 cut(s)	65, 582, 1225, 1310, 1673
BseDI	CCNNGG	6 cut(s)	82, 581, 999, 1671, 1672, 1744
BseGI	GGATG	5 cut(s)	316, 1246, 1484, 1490, 1822
BseJI	GATNNNNATC	1 cut(s)	106
BseLI	CCNNNNNNNGG	4 cut(s)	259, 647, 1187, 1500
BseMI	GCAATG	2 cut(s)	1702, 1782
BseMII	CTCAG	5 cut(s)	70, 201, 424, 1140, 1188
BseNI	ACTGG	1 cut(s)	1297
BsePI	GCGCGC	1 cut(s)	1201
BseRI	GAGGAG	4 cut(s)	102, 169, 274, 722
BseXI	GCAGC	5 cut(s)	706, 980, 1054, 1739, 1770
BseYI	CCCAGC	4 cut(s)	519, 528, 824, 953
Bsh1236I	CGCG	2 cut(s)	746, 1203
BshFI	GGCC	3 cut(s)	1128, 1223, 1743
BsiHKAI	GWGCWC	1 cut(s)	1164
BsiHKCI	CYCGRG	1 cut(s)	82
BsiSI	CCGG	3 cut(s)	83, 99, 689
BslFI	GGGAC	5 cut(s)	62, 469, 614, 1120, 1689
BslI	CCNNNNNNNGG	4 cut(s)	259, 647, 1187, 1500
BsmAI	GTCTC	3 cut(s)	825, 1171, 1668
BsmBI	CGTCTC	1 cut(s)	825
BsmFI	GGGAC	5 cut(s)	62, 469, 614, 1120, 1689
BsmI	GAATGC	2 cut(s)	1033, 1069
BsnI	GGCC	3 cut(s)	1128, 1223, 1743
Bso31I	GGTCTC	1 cut(s)	1171
BsoBI	CYCGRG	1 cut(s)	82
Bsp119I	TTCGAA	2 cut(s)	15, 1788
Bsp1286I	GDGCHC	1 cut(s)	1164
Bsp143I	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
Bsp19I	CCATGG	1 cut(s)	999
BspACI	CCGC	6 cut(s)	68, 354, 357, 744, 837, 1515
BspANI	GGCC	3 cut(s)	1128, 1223, 1743
BspCNI	CTCAG	5 cut(s)	69, 200, 423, 1141, 1189
BspFNI	CGCG	2 cut(s)	746, 1203
BspHI	TCATGA	1 cut(s)	1543
BspLI	GGNNCC	4 cut(s)	62, 330, 1136, 1474
BspPI	GGATC	7 cut(s)	109, 152, 323, 336, 1467, 1480, 1703
BspT104I	TTCGAA	2 cut(s)	15, 1788
BspTNI	GGTCTC	1 cut(s)	1171
BsrDI	GCAATG	2 cut(s)	1702, 1782
BsrFI	RCCGGY	1 cut(s)	688
BsrI	ACTGG	1 cut(s)	1297
BssAI	RCCGGY	1 cut(s)	688
BssECI	CCNNGG	6 cut(s)	82, 581, 999, 1671, 1672, 1744
BssHII	GCGCGC	1 cut(s)	1201
BssMI	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
BssT1I	CCWWGG	1 cut(s)	999
Bst2UI	CCWGG	5 cut(s)	65, 582, 1225, 1310, 1673
Bst4CI	ACNGT	2 cut(s)	642, 1213
Bst6I	CTCTTC	5 cut(s)	187, 219, 292, 496, 1528
BstAPI	GCANNNNNTGC	2 cut(s)	700, 1837
BstBAI	YACGTR	2 cut(s)	201, 244
BstBI	TTCGAA	2 cut(s)	15, 1788
BstC8I	GCNNGC	4 cut(s)	690, 924, 1203, 1392
BstDEI	CTNAG	9 cut(s)	6, 56, 187, 410, 985, 1149, 1197, 1217, 1521
BstDSI	CCRYGG	1 cut(s)	999
BstF5I	GGATG	5 cut(s)	316, 1246, 1484, 1490, 1822
BstFNI	CGCG	2 cut(s)	746, 1203
BstHHI	GCGC	5 cut(s)	206, 694, 1203, 1205, 1527
BstKTI	GATC	9 cut(s)	104, 160, 249, 331, 674, 1447, 1475, 1549, 1711
BstMAI	GTCTC	3 cut(s)	825, 1171, 1668
BstMBI	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
BstMWI	GCNNNNNNNGC	8 cut(s)	529, 694, 700, 723, 977, 986, 995, 1837
BstNI	CCWGG	5 cut(s)	65, 582, 1225, 1310, 1673
BstNSI	RCATGY	2 cut(s)	1378, 1616
BstSCI	CCNGG	8 cut(s)	63, 81, 82, 97, 580, 1223, 1308, 1671
BstUI	CGCG	2 cut(s)	746, 1203
BstV1I	GCAGC	5 cut(s)	706, 980, 1054, 1739, 1770
BstV2I	GAAGAC	2 cut(s)	451, 1184
BstX2I	RGATCY	3 cut(s)	328, 1472, 1708
BstXI	CCANNNNNNTGG	1 cut(s)	1691
BstYI	RGATCY	3 cut(s)	328, 1472, 1708
Bsu36I	CCTNAGG	1 cut(s)	187
BsuRI	GGCC	3 cut(s)	1128, 1223, 1743
BtgI	CCRYGG	1 cut(s)	999
BtgZI	GCGATG	1 cut(s)	732
BtrI	CACGTC	1 cut(s)	217
BtsCI	GGATG	5 cut(s)	316, 1246, 1484, 1490, 1822
BtsI	GCAGTG	2 cut(s)	933, 1768
BtsIMutI	CAGTG	2 cut(s)	933, 1768
Cac8I	GCNNGC	4 cut(s)	690, 924, 1203, 1392
CciI	TCATGA	1 cut(s)	1543
CfoI	GCGC	5 cut(s)	206, 694, 1203, 1205, 1527
Cfr10I	RCCGGY	1 cut(s)	688
Cfr13I	GGNCC	4 cut(s)	61, 638, 1134, 1221
Cfr9I	CCCGGG	1 cut(s)	82
CseI	GACGC	1 cut(s)	766
Csp6I	GTAC	3 cut(s)	385, 652, 898
CspCI	CAANNNNNGTGG	2 cut(s)	68, 103
CviQI	GTAC	3 cut(s)	385, 652, 898
DdeI	CTNAG	9 cut(s)	6, 56, 187, 410, 985, 1149, 1197, 1217, 1521
DpnI	GATC	9 cut(s)	103, 159, 248, 330, 673, 1446, 1474, 1548, 1710
DpnII	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
DraI	TTTAAA	1 cut(s)	684
EaeI	YGGCCR	1 cut(s)	1126
Eam1104I	CTCTTC	5 cut(s)	187, 219, 292, 496, 1528
EarI	CTCTTC	5 cut(s)	187, 219, 292, 496, 1528
Eco130I	CCWWGG	1 cut(s)	999
Eco31I	GGTCTC	1 cut(s)	1171
Eco47I	GGWCC	3 cut(s)	61, 638, 1134
Eco72I	CACGTG	2 cut(s)	201, 244
Eco81I	CCTNAGG	1 cut(s)	187
Eco88I	CYCGRG	1 cut(s)	82
EcoO109I	RGGNCCY	3 cut(s)	61, 1134, 1221
EcoRI	GAATTC	1 cut(s)	1095
EcoRII	CCWGG	5 cut(s)	63, 580, 1223, 1308, 1671
EcoT14I	CCWWGG	1 cut(s)	999
EcoT22I	ATGCAT	1 cut(s)	1614
ErhI	CCWWGG	1 cut(s)	999
Esp3I	CGTCTC	1 cut(s)	825
FaqI	GGGAC	5 cut(s)	62, 469, 614, 1120, 1689
FauI	CCCGC	1 cut(s)	61
FauNDI	CATATG	2 cut(s)	1123, 1608
FbaI	TGATCA	2 cut(s)	1444, 1546
Fnu4HI	GCNGC	6 cut(s)	357, 695, 969, 1043, 1728, 1759
FokI	GGATG	5 cut(s)	303, 1233, 1471, 1477, 1829
Fsp4HI	GCNGC	6 cut(s)	357, 695, 969, 1043, 1728, 1759
FspBI	CTAG	3 cut(s)	675, 1005, 1379
GlaI	GCGC	5 cut(s)	205, 693, 1202, 1204, 1526
GluI	GCNGC	6 cut(s)	357, 695, 969, 1043, 1728, 1759
GsaI	CCCAGC	4 cut(s)	523, 532, 828, 957
GsuI	CTGGAG	3 cut(s)	548, 725, 782
HaeIII	GGCC	3 cut(s)	1128, 1223, 1743
HapII	CCGG	3 cut(s)	83, 99, 689
HgaI	GACGC	1 cut(s)	766
HhaI	GCGC	5 cut(s)	206, 694, 1203, 1205, 1527
Hin6I	GCGC	5 cut(s)	204, 692, 1201, 1203, 1525
HinP1I	GCGC	5 cut(s)	204, 692, 1201, 1203, 1525
HinfI	GANTC	7 cut(s)	596, 661, 767, 812, 1262, 1403, 1480
HpaII	CCGG	3 cut(s)	83, 99, 689
HphI	GGTGA	4 cut(s)	815, 851, 1027, 1673
Hpy166II	GTNNAC	1 cut(s)	645
Hpy188I	TCNGA	6 cut(s)	413, 1062, 1150, 1267, 1477, 1708
Hpy8I	GTNNAC	1 cut(s)	645
Hpy99I	CGWCG	3 cut(s)	218, 812, 884
HpyAV	CCTTC	6 cut(s)	39, 181, 843, 1148, 1464, 1806
HpyCH4III	ACNGT	2 cut(s)	642, 1213
HpyCH4IV	ACGT	6 cut(s)	200, 216, 243, 1277, 1581, 1735
HpyF10VI	GCNNNNNNNGC	8 cut(s)	529, 694, 700, 723, 977, 986, 995, 1837
HpyF3I	CTNAG	9 cut(s)	6, 56, 187, 410, 985, 1149, 1197, 1217, 1521
HpySE526I	ACGT	6 cut(s)	200, 216, 243, 1277, 1581, 1735
HspAI	GCGC	5 cut(s)	204, 692, 1201, 1203, 1525
KroI	GCCGGC	1 cut(s)	688
KroNI	GCCGGC	1 cut(s)	690
Ksp22I	TGATCA	2 cut(s)	1444, 1546
Kzo9I	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
LmnI	GCTCC	3 cut(s)	147, 976, 1159
Lsp1109I	GCAGC	5 cut(s)	706, 980, 1054, 1739, 1770
LweI	GCATC	4 cut(s)	116, 909, 1255, 1526
MaeI	CTAG	3 cut(s)	675, 1005, 1379
MaeII	ACGT	6 cut(s)	200, 216, 243, 1277, 1581, 1735
MaeIII	GTNAC	2 cut(s)	803, 1207
MalI	GATC	9 cut(s)	103, 159, 248, 330, 673, 1446, 1474, 1548, 1710
MboI	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
MfeI	CAATTG	1 cut(s)	1467
MflI	RGATCY	3 cut(s)	328, 1472, 1708
MhlI	GDGCHC	1 cut(s)	1164
MlsI	TGGCCA	1 cut(s)	1128
MluNI	TGGCCA	1 cut(s)	1128
MlyI	GAGTC	2 cut(s)	806, 1256
MmeI	TCCRAC	3 cut(s)	118, 1040, 1831
Mox20I	TGGCCA	1 cut(s)	1128
Mph1103I	ATGCAT	1 cut(s)	1614
MroNI	GCCGGC	1 cut(s)	688
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	8 cut(s)	588, 683, 1014, 1076, 1274, 1329, 1421, 1559
MslI	CAYNNNNRTG	2 cut(s)	1559, 1611
Msp20I	TGGCCA	1 cut(s)	1128
MspI	CCGG	3 cut(s)	83, 99, 689
MspR9I	CCNGG	8 cut(s)	65, 83, 84, 99, 582, 1225, 1310, 1673
MunI	CAATTG	1 cut(s)	1467
Mva1269I	GAATGC	2 cut(s)	1033, 1069
MvaI	CCWGG	5 cut(s)	65, 582, 1225, 1310, 1673
MvnI	CGCG	2 cut(s)	746, 1203
MwoI	GCNNNNNNNGC	8 cut(s)	529, 694, 700, 723, 977, 986, 995, 1837
NaeI	GCCGGC	1 cut(s)	690
NciI	CCSGG	3 cut(s)	83, 84, 99
NcoI	CCATGG	1 cut(s)	999
NdeI	CATATG	2 cut(s)	1123, 1608
NdeII	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
NgoMIV	GCCGGC	1 cut(s)	688
NlaIV	GGNNCC	4 cut(s)	62, 330, 1136, 1474
NmuCI	GTSAC	1 cut(s)	803
NsiI	ATGCAT	1 cut(s)	1614
NspI	RCATGY	2 cut(s)	1378, 1616
NspV	TTCGAA	2 cut(s)	15, 1788
PagI	TCATGA	1 cut(s)	1543
PasI	CCCWGGG	1 cut(s)	1672
PauI	GCGCGC	1 cut(s)	1201
PctI	GAATGC	2 cut(s)	1033, 1069
PdiI	GCCGGC	1 cut(s)	690
PfeI	GAWTC	5 cut(s)	596, 661, 767, 1403, 1480
PflMI	CCANNNNNTGG	1 cut(s)	259
PkrI	GCNGC	6 cut(s)	358, 696, 970, 1044, 1729, 1760
PleI	GAGTC	2 cut(s)	806, 1256
PmaCI	CACGTG	2 cut(s)	201, 244
PmlI	CACGTG	2 cut(s)	201, 244
PpsI	GAGTC	2 cut(s)	806, 1256
Ppu21I	YACGTR	2 cut(s)	201, 244
PpuMI	RGGWCCY	2 cut(s)	61, 1134
PshBI	ATTAAT	2 cut(s)	588, 1329
Psp1406I	AACGTT	2 cut(s)	1277, 1735
Psp5II	RGGWCCY	2 cut(s)	61, 1134
Psp6I	CCWGG	5 cut(s)	63, 580, 1223, 1308, 1671
PspCI	CACGTG	2 cut(s)	201, 244
PspFI	CCCAGC	4 cut(s)	519, 528, 824, 953
PspGI	CCWGG	5 cut(s)	63, 580, 1223, 1308, 1671
PspN4I	GGNNCC	4 cut(s)	62, 330, 1136, 1474
PspPI	GGNCC	4 cut(s)	61, 638, 1134, 1221
PspPPI	RGGWCCY	2 cut(s)	61, 1134
PsuI	RGATCY	3 cut(s)	328, 1472, 1708
PteI	GCGCGC	1 cut(s)	1201
RsaI	GTAC	3 cut(s)	386, 653, 899
RsaNI	GTAC	3 cut(s)	385, 652, 898
RseI	CAYNNNNRTG	2 cut(s)	1559, 1611
SaqAI	TTAA	8 cut(s)	588, 683, 1014, 1076, 1274, 1329, 1421, 1559
SatI	GCNGC	6 cut(s)	357, 695, 969, 1043, 1728, 1759
Sau3AI	GATC	9 cut(s)	101, 157, 246, 328, 671, 1444, 1472, 1546, 1708
Sau96I	GGNCC	4 cut(s)	61, 638, 1134, 1221
SchI	GAGTC	2 cut(s)	806, 1256
ScrFI	CCNGG	8 cut(s)	65, 83, 84, 99, 582, 1225, 1310, 1673
SduI	GDGCHC	1 cut(s)	1164
SfaNI	GCATC	4 cut(s)	116, 909, 1255, 1526
SfuI	TTCGAA	2 cut(s)	15, 1788
SinI	GGWCC	3 cut(s)	61, 638, 1134
SmaI	CCCGGG	1 cut(s)	84
SmiMI	CAYNNNNRTG	2 cut(s)	1559, 1611
SsiI	CCGC	6 cut(s)	68, 354, 357, 744, 837, 1515
SspMI	CTAG	3 cut(s)	675, 1005, 1379
StyD4I	CCNGG	8 cut(s)	63, 81, 82, 97, 580, 1223, 1308, 1671
StyI	CCWWGG	1 cut(s)	999
TaaI	ACNGT	2 cut(s)	642, 1213
TaiI	ACGT	6 cut(s)	203, 219, 246, 1280, 1584, 1738
TaqI	TCGA	7 cut(s)	15, 213, 249, 420, 659, 879, 1788
TaqII	GACCGA	1 cut(s)	1736
TauI	GCSGC	1 cut(s)	359
TfiI	GAWTC	5 cut(s)	596, 661, 767, 1403, 1480
Tru1I	TTAA	8 cut(s)	588, 683, 1014, 1076, 1274, 1329, 1421, 1559
Tru9I	TTAA	8 cut(s)	588, 683, 1014, 1076, 1274, 1329, 1421, 1559
TscAI	CASTG	2 cut(s)	933, 1768
TseFI	GTSAC	1 cut(s)	803
TseI	GCWGC	5 cut(s)	694, 968, 1042, 1727, 1758
Tsp45I	GTSAC	1 cut(s)	803
TspDTI	ATGAA	7 cut(s)	141, 163, 1097, 1098, 1130, 1532, 1646
TspMI	CCCGGG	1 cut(s)	82
TspRI	CASTG	2 cut(s)	933, 1768
Van91I	CCANNNNNTGG	1 cut(s)	259
VpaK11BI	GGWCC	3 cut(s)	61, 638, 1134
VspI	ATTAAT	2 cut(s)	588, 1329
XapI	RAATTY	4 cut(s)	604, 735, 856, 1095
XceI	RCATGY	2 cut(s)	1378, 1616
XmaI	CCCGGG	1 cut(s)	82
XspI	CTAG	3 cut(s)	675, 1005, 1379
Zsp2I	ATGCAT	1 cut(s)	1614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.