MD04G1138400.v1.1

Domain of unknown function (DUF1929)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0017541
Physical Location & Seq
Forward (+)
22608467 .. 22610074
1608 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1138400.v1.1.491

Sequence Viewer

Length: 1608 bp
ATGCCTTCTGTTTCTCAGCAATGGCTGCTACTGCTCCTAATATCCACAGTACTAACAGTCTTCGCACGTGCCGACTTACCAGGCACGTGGGAACTCCTCGTTCAGAACGCCGGCCTAGCCTCCATGCACACCGCCGTCACACGCTTCAACACCGTGGTGCTCCTCGACCGCACCAACATCGGCCCTTCCCGCAAAATGCTCCGCAGGGGCCACTGCCGCAACGACCCCTACGACGCGGTTCTGAAGCTCGACTGCTACGCCCACTCCGTGCTCTTCGACCTCCAAACAAAGCAAATCCGGCCACTCATGATCCAGACCGACACTTGGTGCTCATCCGGGCAGTTCCTCCCGGACGGCACGTTATTACAAACAGGTGGTGACCTGGACGGGGTGAAAAAGATCCGAAAATTCGTCCCGTGCGAGGCAACCGGGTCGTGCGACTGGGTGGAGCTTGCTGACGTGGAATTGGCCAACGGCAGGTGGTACGCCACGAATCAAATTCTGCCGGACGGGTCGGTGGCTATAGTCGGCGGGAGAGCGGCCAACACGGTGGAGTATTACCCGCCGAGAAAAGGCGCCGTTGCTCTCAATTTCCTTGCTGACGTGGAGGACAACCAAATGGACAATTTATACCCGTACGTGCATCTCCTCCCCAACGGCCACCTCTTCATCTTCGCTAATAACAAAGCGGTGTCGTACGATCACAACGTGGATAAAATCGTGAGGGAATATCCACCGTTGGATGGCGGCCCACGTAATTACCCGTCCGCCGGATCATCCGCAATGCTGGCGTTAGAAGGCGACTACTCAACGGCTGTGATTTTGGTTTGTGGCGGGGCCCCGTACGGCGCTTTCATCGAGAGGAGCACCGACACCCCGGCGCACGGTAGCTGCGGGCGCATCATAGCGACGTCGCCGGACCCGGTTTGGGAAATGGAGGACATGCCGTTCGGGAGGATTATGGGGGACATGGTCATGCTCCCAAGCGGCGACGTTTTGGTCATCAACGGAGCGCAAGCTGGGACCCAGGGCTTCGAGGCGGCATCCAACCCGTGCTTGTACCCGCTTCTTTACCGATCCGAACAGCCAGTCGGCCTGCGGTTCATGACTTTGAACCCGGGAACCGTGCCCCGATTGTACCACTCCACCGCGAATCTCTTACCCGATGGACGGGTATTAATCGCCGGAAGCAATCCGCATTATTTCTACAGATTCGACGCCGAGTTTCCCACGGAGTTACGAATCGAAGCGTTTTCGCCCGAGTATTTGAGTCCGGACCGGGCGAATCTCCGACCCATTTTCGAGGGGATACCCGAAACGGTGCGCTACGGCGAGAGTTTTGACGTTACGGTGTCGGTTCCGCTGTCCGTGGTGGGGGTTGTGGAGGTTAATTTGGGGAACGCGCCTTTTGCCACGCATTCGTTTTCGCAGGGTCAGCGGCTGGTCAAACTGGCCGTTACGCCGTCGGTGCCGGACGGTGAGGGGCGTTACAGGATTAGCTGTGTGGCGCCGCCGAATGGGATGGTTGCTCCGCCGGGTTATTACATGGCATTTGCGGTCAATCAGGGCGTGCCAAGTGTTGCGCGCTGGATACATCTGGTGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

536

Amino Acids

58.45

Weight (kDa)

5.42

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 42 - 422 1.4e-168 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 431 - 532 7.1e-28 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017541)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53950
fragaria_vesca FvH4_6g12780
malus_domestica MD04G1138400.v1.1
prunus_persica Prupe.6G264000_v2.0.a1
pyrus_communis pycom04g12650
rosa_chinensis RchiOBHm_Chr3g0464771
rosa_laevigata RLG00000024673
rosa_multiflora Rmu_sc0007114.1_g000012
rosa_roxburghii Rroxscaffold_6G00415430
rosa_rugosa Rorug03G0074000
rosa_samantha Rh3BG136500
rosa_wichuraiana Rw3G011170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 468
AasI GACNNNNNNGTC 1 cut(s) 998
AatII GACGTC 1 cut(s) 914
Acc36I ACCTGC 1 cut(s) 468
AccB1I GGYRCC 3 cut(s) 575, 1468, 1507
AccBSI CCGCTC 1 cut(s) 539
AccII CGCG 4 cut(s) 236, 1151, 1403, 1585
AccIII TCCGGA 1 cut(s) 1273
AclWI GGATC 4 cut(s) 304, 394, 781, 1071
AcoI YGGCCR 5 cut(s) 299, 468, 540, 658, 1452
AcsI RAATTY 2 cut(s) 407, 498
AcuI CTGAAG 1 cut(s) 263
AcvI CACGTG 2 cut(s) 68, 87
AcyI GRCGYC 4 cut(s) 576, 911, 1218, 1508
AdeI CACNNNGTG 3 cut(s) 268, 327, 709
AfaI GTAC 7 cut(s) 51, 485, 638, 698, 845, 1061, 1139
AgsI TTSAA 2 cut(s) 148, 1114
AjiI CACGTC 2 cut(s) 460, 604
AjnI CCWGG 3 cut(s) 79, 381, 1026
AleI CACNNNNGTG 1 cut(s) 155
AloI GAACNNNNNNTCC 2 cut(s) 932, 964
AluBI AGCT 5 cut(s) 247, 451, 891, 1019, 1500
AluI AGCT 5 cut(s) 247, 451, 891, 1019, 1500
Alw21I GWGCWC 4 cut(s) 162, 273, 332, 869
AlwI GGATC 4 cut(s) 304, 394, 781, 1071
AlwNI CAGNNNCTG 1 cut(s) 1441
Ama87I CYCGRG 2 cut(s) 1117, 1259
Aor13HI TCCGGA 1 cut(s) 1273
ApaI GGGCCC 1 cut(s) 841
ApeKI GCWGC 2 cut(s) 25, 891
ApoI RAATTY 2 cut(s) 407, 498
ArsI GACNNNNNNTTYG 4 cut(s) 932, 964, 1074, 1106
AseI ATTAAT 1 cut(s) 1178
AspS9I GGNCC 8 cut(s) 182, 208, 749, 837, 838, 919, 1023, 1276
AsuC2I CCSGG 9 cut(s) 337, 350, 430, 878, 923, 1118, 1119, 1280, 1536
AsuHPI GGTGA 3 cut(s) 389, 403, 1490
AvaI CYCGRG 2 cut(s) 1117, 1259
AvaII GGWCC 3 cut(s) 919, 1023, 1276
BaeGI GKGCMC 2 cut(s) 841, 1131
BalI TGGCCA 1 cut(s) 470
BanI GGYRCC 3 cut(s) 575, 1468, 1507
BanII GRGCYC 1 cut(s) 841
BbrPI CACGTG 2 cut(s) 68, 87
BbsI GAAGAC 1 cut(s) 52
Bbv12I GWGCWC 4 cut(s) 162, 273, 332, 869
BbvI GCAGC 2 cut(s) 12, 878
BccI CCATC 3 cut(s) 737, 1160, 1516
BcgI CGANNNNNNTGC 4 cut(s) 160, 194, 414, 448
BciT130I CCWGG 3 cut(s) 81, 383, 1028
BciVI GTATCC 2 cut(s) 1302, 1584
BcnI CCSGG 9 cut(s) 337, 350, 430, 878, 923, 1118, 1119, 1280, 1536
BfaI CTAG 1 cut(s) 116
BfmI CTRYAG 2 cut(s) 522, 1207
BfoI RGCGCY 3 cut(s) 579, 852, 1511
BfuAI ACCTGC 1 cut(s) 468
BfuI GTATCC 2 cut(s) 1302, 1584
BisI GCNGC 9 cut(s) 26, 217, 540, 748, 892, 988, 1041, 1439, 1511
BlsI GCNGC 9 cut(s) 27, 218, 541, 749, 893, 989, 1042, 1440, 1512
BmcAI AGTACT 1 cut(s) 51
Bme18I GGWCC 3 cut(s) 919, 1023, 1276
BmeT110I CYCGRG 2 cut(s) 1117, 1259
BmgBI CACGTC 2 cut(s) 460, 604
BmgT120I GGNCC 8 cut(s) 182, 208, 749, 837, 838, 919, 1023, 1276
BmrI ACTGGG 1 cut(s) 451
BmsI GCATC 3 cut(s) 652, 909, 1052
BmuI ACTGGG 1 cut(s) 451
BpiI GAAGAC 1 cut(s) 52
BpuMI CCSGG 9 cut(s) 337, 350, 430, 878, 923, 1118, 1119, 1280, 1536
BsaAI YACGTR 4 cut(s) 68, 87, 640, 755
BsaHI GRCGYC 4 cut(s) 576, 911, 1218, 1508
BsaJI CCNNGG 7 cut(s) 153, 876, 1026, 1027, 1117, 1230, 1368
BsaWI WCCGGW 1 cut(s) 1273
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 3 cut(s) 446, 1088, 1455
Bse3DI GCAATG 2 cut(s) 26, 789
BseAI TCCGGA 1 cut(s) 1273
BseBI CCWGG 3 cut(s) 81, 383, 1028
BseDI CCNNGG 7 cut(s) 153, 876, 1026, 1027, 1117, 1230, 1368
BseGI GGATG 5 cut(s) 332, 748, 776, 1043, 1527
BseMI GCAATG 2 cut(s) 26, 789
BseMII CTCAG 1 cut(s) 29
BseNI ACTGG 3 cut(s) 446, 1088, 1455
BsePI GCGCGC 1 cut(s) 1583
BseRI GAGGAG 4 cut(s) 86, 152, 638, 877
BseSI GKGCMC 2 cut(s) 841, 1131
BseXI GCAGC 2 cut(s) 12, 878
BseYI CCCAGC 1 cut(s) 1019
Bsh1236I CGCG 4 cut(s) 236, 1151, 1403, 1585
Bsh1285I CGRYCG 1 cut(s) 169
BshNI GGYRCC 3 cut(s) 575, 1468, 1507
BsiEI CGRYCG 1 cut(s) 169
BsiHKAI GWGCWC 4 cut(s) 162, 273, 332, 869
BsiHKCI CYCGRG 2 cut(s) 1117, 1259
BsiWI CGTACG 3 cut(s) 636, 696, 843
BslFI GGGAC 3 cut(s) 398, 980, 1036
BsmFI GGGAC 3 cut(s) 398, 980, 1036
BsmI GAATGC 1 cut(s) 1417
BsoBI CYCGRG 2 cut(s) 1117, 1259
Bsp120I GGGCCC 1 cut(s) 837
Bsp1286I GDGCHC 6 cut(s) 162, 273, 332, 841, 869, 1131
Bsp13I TCCGGA 1 cut(s) 1273
Bsp143I GATC 5 cut(s) 309, 399, 700, 773, 1076
BspCNI CTCAG 1 cut(s) 28
BspEI TCCGGA 1 cut(s) 1273
BspFNI CGCG 4 cut(s) 236, 1151, 1403, 1585
BspHI TCATGA 2 cut(s) 306, 1104
BspMI ACCTGC 1 cut(s) 468
BspPI GGATC 4 cut(s) 304, 394, 781, 1071
BspQI GCTCTTC 1 cut(s) 278
BspT107I GGYRCC 3 cut(s) 575, 1468, 1507
BsrBI CCGCTC 1 cut(s) 539
BsrDI GCAATG 2 cut(s) 26, 789
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 3 cut(s) 446, 1088, 1455
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 7 cut(s) 153, 876, 1026, 1027, 1117, 1230, 1368
BssHII GCGCGC 1 cut(s) 1583
BssMI GATC 5 cut(s) 309, 399, 700, 773, 1076
BssNI GRCGYC 4 cut(s) 576, 911, 1218, 1508
Bst2UI CCWGG 3 cut(s) 81, 383, 1028
Bst6I CTCTTC 2 cut(s) 278, 671
BstACI GRCGYC 4 cut(s) 576, 911, 1218, 1508
BstAPI GCANNNNNTGC 1 cut(s) 25
BstBAI YACGTR 4 cut(s) 68, 87, 640, 755
BstC8I GCNNGC 8 cut(s) 112, 453, 789, 896, 1017, 1097, 1571, 1585
BstDEI CTNAG 1 cut(s) 15
BstDSI CCRYGG 3 cut(s) 153, 1230, 1368
BstEII GGTNACC 1 cut(s) 377
BstF5I GGATG 5 cut(s) 332, 748, 776, 1043, 1527
BstFNI CGCG 4 cut(s) 236, 1151, 1403, 1585
BstH2I RGCGCY 3 cut(s) 579, 852, 1511
BstKTI GATC 5 cut(s) 312, 402, 703, 776, 1079
BstMBI GATC 5 cut(s) 309, 399, 700, 773, 1076
BstMCI CGRYCG 1 cut(s) 169
BstNI CCWGG 3 cut(s) 81, 383, 1028
BstNSI RCATGY 1 cut(s) 946
BstPI GGTNACC 1 cut(s) 377
BstSFI CTRYAG 2 cut(s) 522, 1207
BstSLI GKGCMC 2 cut(s) 841, 1131
BstUI CGCG 4 cut(s) 236, 1151, 1403, 1585
BstV1I GCAGC 2 cut(s) 12, 878
BstV2I GAAGAC 1 cut(s) 52
BstX2I RGATCY 1 cut(s) 399
BstXI CCANNNNNNTGG 2 cut(s) 87, 550
BstYI RGATCY 1 cut(s) 399
BsuI GTATCC 2 cut(s) 1302, 1584
BtgI CCRYGG 3 cut(s) 153, 1230, 1368
BtrI CACGTC 2 cut(s) 460, 604
BtsCI GGATG 5 cut(s) 332, 748, 776, 1043, 1527
BtsI GCAGTG 1 cut(s) 211
BtsIMutI CAGTG 1 cut(s) 211
BveI ACCTGC 1 cut(s) 468
Cac8I GCNNGC 8 cut(s) 112, 453, 789, 896, 1017, 1097, 1571, 1585
CaiI CAGNNNCTG 1 cut(s) 1441
CciI TCATGA 2 cut(s) 306, 1104
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 8 cut(s) 182, 208, 749, 837, 838, 919, 1023, 1276
Cfr9I CCCGGG 1 cut(s) 1117
CpoI CGGWCCG 1 cut(s) 1276
CseI GACGC 2 cut(s) 242, 1226
Csp6I GTAC 7 cut(s) 50, 484, 637, 697, 844, 1060, 1138
CspI CGGWCCG 1 cut(s) 1276
CviAII CATG 7 cut(s) 124, 307, 943, 970, 976, 1105, 1546
CviQI GTAC 7 cut(s) 50, 484, 637, 697, 844, 1060, 1138
DdeI CTNAG 1 cut(s) 15
DinI GGCGCC 2 cut(s) 577, 1509
DpnI GATC 5 cut(s) 311, 401, 702, 775, 1078
DpnII GATC 5 cut(s) 309, 399, 700, 773, 1076
DraIII CACNNNGTG 3 cut(s) 268, 327, 709
DrdI GACNNNNNNGTC 1 cut(s) 998
DseDI GACNNNNNNGTC 1 cut(s) 998
EaeI YGGCCR 5 cut(s) 299, 468, 540, 658, 1452
Eam1104I CTCTTC 2 cut(s) 278, 671
EarI CTCTTC 2 cut(s) 278, 671
EciI GGCGGA 2 cut(s) 757, 1521
Eco24I GRGCYC 1 cut(s) 841
Eco47I GGWCC 3 cut(s) 919, 1023, 1276
Eco57I CTGAAG 1 cut(s) 263
Eco72I CACGTG 2 cut(s) 68, 87
Eco88I CYCGRG 2 cut(s) 1117, 1259
Eco91I GGTNACC 1 cut(s) 377
EcoO109I RGGNCCY 3 cut(s) 837, 838, 1023
EcoO65I GGTNACC 1 cut(s) 377
EcoRII CCWGG 3 cut(s) 79, 381, 1026
EcoT38I GRGCYC 1 cut(s) 841
EgeI GGCGCC 2 cut(s) 577, 1509
EheI GGCGCC 2 cut(s) 577, 1509
FaeI CATG 7 cut(s) 127, 310, 946, 973, 979, 1108, 1549
FaqI GGGAC 3 cut(s) 398, 980, 1036
FatI CATG 7 cut(s) 123, 306, 942, 969, 975, 1104, 1545
FauI CCCGC 6 cut(s) 197, 524, 570, 827, 887, 1071
Fnu4HI GCNGC 9 cut(s) 26, 217, 540, 748, 892, 988, 1041, 1439, 1511
FokI GGATG 5 cut(s) 319, 755, 763, 1030, 1534
FriOI GRGCYC 1 cut(s) 841
Fsp4HI GCNGC 9 cut(s) 26, 217, 540, 748, 892, 988, 1041, 1439, 1511
FspBI CTAG 1 cut(s) 116
GluI GCNGC 9 cut(s) 26, 217, 540, 748, 892, 988, 1041, 1439, 1511
GsaI CCCAGC 1 cut(s) 1023
HaeII RGCGCY 3 cut(s) 579, 852, 1511
HgaI GACGC 2 cut(s) 242, 1226
Hin1I GRCGYC 4 cut(s) 576, 911, 1218, 1508
Hin1II CATG 7 cut(s) 127, 310, 946, 973, 979, 1108, 1549
HinfI GANTC 6 cut(s) 493, 1153, 1212, 1242, 1270, 1285
HphI GGTGA 3 cut(s) 389, 403, 1490
Hpy188I TCNGA 5 cut(s) 105, 243, 404, 1081, 1292
Hpy188III TCNNGA 8 cut(s) 307, 313, 721, 859, 952, 1105, 1274, 1605
Hpy99I CGWCG 6 cut(s) 236, 913, 916, 995, 1220, 1468
HpyAV CCTTC 3 cut(s) 15, 195, 791
HpyCH4V TGCA 2 cut(s) 127, 643
HpyF3I CTNAG 1 cut(s) 15
Hsp92I GRCGYC 4 cut(s) 576, 911, 1218, 1508
Hsp92II CATG 7 cut(s) 127, 310, 946, 973, 979, 1108, 1549
KasI GGCGCC 2 cut(s) 575, 1507
KflI GGGWCCC 1 cut(s) 1023
Kpn2I TCCGGA 1 cut(s) 1273
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Kzo9I GATC 5 cut(s) 309, 399, 700, 773, 1076
LguI GCTCTTC 1 cut(s) 278
LmnI GCTCC 8 cut(s) 39, 165, 204, 448, 864, 984, 1010, 1534
Lsp1109I GCAGC 2 cut(s) 12, 878
LweI GCATC 3 cut(s) 652, 909, 1052
MaeI CTAG 1 cut(s) 116
MaeIII GTNAC 6 cut(s) 136, 377, 1236, 1345, 1456, 1487
MalI GATC 5 cut(s) 311, 401, 702, 775, 1078
MbiI CCGCTC 1 cut(s) 539
MboI GATC 5 cut(s) 309, 399, 700, 773, 1076
MboII GAAGA 4 cut(s) 52, 265, 658, 664
MflI RGATCY 1 cut(s) 399
MhlI GDGCHC 6 cut(s) 162, 273, 332, 841, 869, 1131
MlsI TGGCCA 1 cut(s) 470
MluCI AATT 7 cut(s) 407, 464, 498, 589, 625, 757, 1390
MluNI TGGCCA 1 cut(s) 470
Mly113I GGCGCC 2 cut(s) 576, 1508
MlyI GAGTC 1 cut(s) 1279
MmeI TCCRAC 3 cut(s) 720, 1071, 1315
Mox20I TGGCCA 1 cut(s) 470
MroI TCCGGA 1 cut(s) 1273
MroNI GCCGGC 1 cut(s) 110
MscI TGGCCA 1 cut(s) 470
MseI TTAA 2 cut(s) 1178, 1389
MslI CAYNNNNRTG 2 cut(s) 155, 974
Msp20I TGGCCA 1 cut(s) 470
MspA1I CMGCKG 2 cut(s) 1363, 1438
Mva1269I GAATGC 1 cut(s) 1417
MvaI CCWGG 3 cut(s) 81, 383, 1028
MvnI CGCG 4 cut(s) 236, 1151, 1403, 1585
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 2 cut(s) 576, 1508
NciI CCSGG 9 cut(s) 337, 350, 430, 878, 923, 1118, 1119, 1280, 1536
NdeII GATC 5 cut(s) 309, 399, 700, 773, 1076
NgoMIV GCCGGC 1 cut(s) 110
NlaIII CATG 7 cut(s) 127, 310, 946, 973, 979, 1108, 1549
NmeAIII GCCGAG 2 cut(s) 591, 1246
NmuCI GTSAC 2 cut(s) 136, 377
NspI RCATGY 1 cut(s) 946
OliI CACNNNNGTG 1 cut(s) 155
PagI TCATGA 2 cut(s) 306, 1104
PaqCI CACCTGC 1 cut(s) 468
PasI CCCWGGG 1 cut(s) 1027
PauI GCGCGC 1 cut(s) 1583
PciSI GCTCTTC 1 cut(s) 278
PcsI WCGNNNNNNNCGW 5 cut(s) 69, 228, 264, 417, 705
PctI GAATGC 1 cut(s) 1417
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 5 cut(s) 493, 1153, 1212, 1242, 1285
Pfl23II CGTACG 3 cut(s) 636, 696, 843
PflFI GACNNNGTC 1 cut(s) 971
PfoI TCCNGGA 1 cut(s) 348
PkrI GCNGC 9 cut(s) 27, 218, 541, 749, 893, 989, 1042, 1440, 1512
PleI GAGTC 1 cut(s) 1278
PluTI GGCGCC 2 cut(s) 579, 1511
PmaCI CACGTG 2 cut(s) 68, 87
PmlI CACGTG 2 cut(s) 68, 87
PpsI GAGTC 1 cut(s) 1278
Ppu21I YACGTR 4 cut(s) 68, 87, 640, 755
PpuMI RGGWCCY 1 cut(s) 1023
PshBI ATTAAT 1 cut(s) 1178
Psp5II RGGWCCY 1 cut(s) 1023
Psp6I CCWGG 3 cut(s) 79, 381, 1026
PspCI CACGTG 2 cut(s) 68, 87
PspEI GGTNACC 1 cut(s) 377
PspFI CCCAGC 1 cut(s) 1019
PspGI CCWGG 3 cut(s) 79, 381, 1026
PspLI CGTACG 3 cut(s) 636, 696, 843
PspOMI GGGCCC 1 cut(s) 837
PspPI GGNCC 8 cut(s) 182, 208, 749, 837, 838, 919, 1023, 1276
PspPPI RGGWCCY 1 cut(s) 1023
PstNI CAGNNNCTG 1 cut(s) 1441
PsuI RGATCY 1 cut(s) 399
PsyI GACNNNGTC 1 cut(s) 971
PteI GCGCGC 1 cut(s) 1583
RsaI GTAC 7 cut(s) 51, 485, 638, 698, 845, 1061, 1139
RsaNI GTAC 7 cut(s) 50, 484, 637, 697, 844, 1060, 1138
RseI CAYNNNNRTG 2 cut(s) 155, 974
Rsr2I CGGWCCG 1 cut(s) 1276
RsrII CGGWCCG 1 cut(s) 1276
SapI GCTCTTC 1 cut(s) 278
SaqAI TTAA 2 cut(s) 1178, 1389
SatI GCNGC 9 cut(s) 26, 217, 540, 748, 892, 988, 1041, 1439, 1511
Sau3AI GATC 5 cut(s) 309, 399, 700, 773, 1076
Sau96I GGNCC 8 cut(s) 182, 208, 749, 837, 838, 919, 1023, 1276
ScaI AGTACT 1 cut(s) 51
SchI GAGTC 1 cut(s) 1279
SduI GDGCHC 6 cut(s) 162, 273, 332, 841, 869, 1131
SfaNI GCATC 3 cut(s) 652, 909, 1052
SfcI CTRYAG 2 cut(s) 522, 1207
SfoI GGCGCC 2 cut(s) 577, 1509
SinI GGWCC 3 cut(s) 919, 1023, 1276
SmaI CCCGGG 1 cut(s) 1119
SmiMI CAYNNNNRTG 2 cut(s) 155, 974
Sse9I AATT 7 cut(s) 407, 464, 498, 589, 625, 757, 1390
SspDI GGCGCC 2 cut(s) 575, 1507
SspMI CTAG 1 cut(s) 116
TaqI TCGA 8 cut(s) 165, 249, 276, 858, 1035, 1215, 1245, 1302
TaqII GACCGA 1 cut(s) 332
TasI AATT 7 cut(s) 407, 464, 498, 589, 625, 757, 1390
TatI WGTACW 1 cut(s) 49
TauI GCSGC 7 cut(s) 219, 542, 750, 990, 1043, 1441, 1513
TfiI GAWTC 5 cut(s) 493, 1153, 1212, 1242, 1285
Tru1I TTAA 2 cut(s) 1178, 1389
Tru9I TTAA 2 cut(s) 1178, 1389
TscAI CASTG 1 cut(s) 218
TseFI GTSAC 2 cut(s) 136, 377
TseI GCWGC 2 cut(s) 25, 891
Tsp45I GTSAC 2 cut(s) 136, 377
TspDTI ATGAA 3 cut(s) 658, 844, 1093
TspGWI ACGGA 4 cut(s) 256, 1023, 1247, 1357
TspMI CCCGGG 1 cut(s) 1117
TspRI CASTG 1 cut(s) 218
Tth111I GACNNNGTC 1 cut(s) 971
VpaK11BI GGWCC 3 cut(s) 919, 1023, 1276
VspI ATTAAT 1 cut(s) 1178
XapI RAATTY 2 cut(s) 407, 498
XceI RCATGY 1 cut(s) 946
XmaI CCCGGG 1 cut(s) 1117
XspI CTAG 1 cut(s) 116
ZraI GACGTC 1 cut(s) 912
ZrmI AGTACT 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.