Rroxscaffold_6G00415430

Domain of unknown function (DUF1929)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0017541
Physical Location & Seq
Forward (+)
37628490 .. 37630097
1608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415430.1

Sequence Viewer

Length: 1608 bp
ATGGCCTGCGTCGCATTCTCCATTCTCACACTTGCTCTACTCAACTGTGCAGCTATCTTTACGCGTGCCGACCTCCCCGGTACGTGGGAGCTCCTCGTCGCCAACGCCGGCATCTCCTCCATGCACACCGCCGTCACCCGCTTCAACACCGTCGTCCTCCTCGACCGCACCAACATCGGCCCCTCCCGCAAAATGCTCCGCAGGGGCCACTGCCGCAACGACCCCAGCGACGCCGTTCTGAAGCACGACTGCTACGCTCACTCCGTCCAATTCGACCCCCAGACCAACCAAATCCGTCCCCTCATGATCCTCACCGACACGTGGTGCTCGTCCGGCCAGTTCCTCCCGGATGGCACTCTGCTCCAAACCGGGGGCGACCTCGACGGCCACAGAAAAATCCGCAAGTTCGAACCGTGCGAGGCCGCCGGGTCGTGCGACTGGGTCGAGCTTGATGACGTGGAGTTGACCGACGGCAGGTGGTACGCCACCAACCAGATTCTCCCCGACGGGTCGGTGATTATAGTCGGAGGCAGAGCCGCCAACACGGTGGAGTATTACCCGCCGCGAAACGGGGGCGCCGTCGAGCTGAAGTTTCTCGCTGATGTGGAGGATACTCAGATGGACAACTTGTACCCTTACCTGCATCTCCTCCCGAACGGTCGCCTCTTCATCTTCGCTAACAACAAGGCGGTGCTGTACGATCACCAGACCGACAAAGTCGCCAGAGAATATCCACCGTTGGATGGCGGGCCGCGTAACTACCCCTCAGCCGGATCGTCCGCAATGCTGGCACTCGAAGGTGACTACTCCACCGCAGTCATCGTTGTCTGCGGTGGGGCCCAGTACGGCGCGTTTATCCAGAAGAGCACGGACACTCCGGCGCACGGCAGCTGCGGCAGGATCGTGGCGACTTCACCCGACCCGGTTTGGGAAATGGAGGACATGCCGTTCGGGAGGATCATGGGGGACATGGTCATGCTTCCGACCGGCGAGGTTTTGGTGATCAACGGAGCTCAAGCTGGGACCCAGGGGTTTGAAATGGCTTCAAACCCCTGTTTGTACCCGCTTCTTTACCGACCCGAGCAGCCAGTCGGGTTGCGGTTCATGACGTTGAACCCGGGAACAGTGCCGAGATTGTACCACTCCACCGCGAACTTGTTACCGGACGGGCGGGTGTTGATTGCGGGAAGTAATCCGCATTACTTCTACAAATTCAAGGCTGAATTTCCCACCGAGTTGAGAATCGAAGCGTTTTCGCCCGAGTATTTGGGTCCGGACCGGGCCAATCTCCGACCTGTGATCGAGAGAGTTCCGGAAACGGTACGTTACGGCGAGCGTTTTGAGGTGTTGGTGTCGGTGCCGCTATCTGTGGTGGGAATTGTGGAGGTTAATTTGGGTAGCGCACCTTTTGCCACGCATTCGTTTTCGCAGGGTCAACGTCTGGTCAAATTGGCCGTTACGCCTTCAGTCCCAGACGGCGGCGCCCGATACAGAATTAGTTGTGTGGCGCCACCGAATGGAATGGTGGCTCCGCCGGGCTATTACATGGCATTTGCGGTCAATCAAGGCGTGCCCAGTGTCGCTCGTTGGATACATTTGGTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

535

Amino Acids

58.46

Weight (kDa)

5.68

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 41 - 422 1e-172 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 431 - 532 8.5e-28 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017541)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53950
fragaria_vesca FvH4_6g12780
malus_domestica MD04G1138400.v1.1
prunus_persica Prupe.6G264000_v2.0.a1
pyrus_communis pycom04g12650
rosa_chinensis RchiOBHm_Chr3g0464771
rosa_laevigata RLG00000024673
rosa_multiflora Rmu_sc0007114.1_g000012
rosa_roxburghii Rroxscaffold_6G00415430
rosa_rugosa Rorug03G0074000
rosa_samantha Rh3BG136500
rosa_wichuraiana Rw3G011170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 465
Acc36I ACCTGC 2 cut(s) 465, 648
AccB1I GGYRCC 4 cut(s) 575, 1357, 1481, 1507
AccB7I CCANNNNNTGG 1 cut(s) 1517
AccII CGCG 5 cut(s) 64, 565, 754, 851, 1151
AccIII TCCGGA 2 cut(s) 1273, 1312
AclWI GGATC 4 cut(s) 301, 781, 908, 965
AcoI YGGCCR 3 cut(s) 334, 385, 1452
AcsI RAATTY 2 cut(s) 1211, 1223
AcuI CTGAAG 3 cut(s) 260, 608, 1449
AcvI CACGTG 1 cut(s) 321
AcyI GRCGYC 4 cut(s) 231, 576, 1482, 1508
AdeI CACNNNGTG 1 cut(s) 324
AfaI GTAC 8 cut(s) 82, 482, 632, 698, 845, 1061, 1139, 1323
AflIII ACRYGT 2 cut(s) 62, 318
AgsI TTSAA 5 cut(s) 145, 1037, 1047, 1114, 1216
AjiI CACGTC 1 cut(s) 457
AjnI CCWGG 1 cut(s) 1026
AloI GAACNNNNNNTCC 2 cut(s) 932, 964
AluBI AGCT 7 cut(s) 53, 91, 448, 586, 891, 1013, 1019
AluI AGCT 7 cut(s) 53, 91, 448, 586, 891, 1013, 1019
Alw21I GWGCWC 4 cut(s) 93, 329, 869, 1015
AlwI GGATC 4 cut(s) 301, 781, 908, 965
Ama87I CYCGRG 3 cut(s) 1079, 1117, 1259
Aor13HI TCCGGA 2 cut(s) 1273, 1312
ApaI GGGCCC 1 cut(s) 841
ApeKI GCWGC 4 cut(s) 50, 888, 891, 1084
ApoI RAATTY 2 cut(s) 1211, 1223
ArsI GACNNNNNNTTYG 2 cut(s) 932, 964
AspLEI GCGC 6 cut(s) 578, 851, 883, 1403, 1484, 1510
AspS9I GGNCC 9 cut(s) 179, 205, 749, 837, 838, 1023, 1271, 1276, 1281
AsuC2I CCSGG 9 cut(s) 78, 347, 370, 427, 923, 1118, 1119, 1280, 1536
AsuHPI GGTGA 7 cut(s) 127, 304, 526, 695, 812, 906, 1012
AsuII TTCGAA 1 cut(s) 408
AvaI CYCGRG 3 cut(s) 1079, 1117, 1259
AvaII GGWCC 3 cut(s) 1023, 1271, 1276
BaeGI GKGCMC 2 cut(s) 841, 1575
BanI GGYRCC 4 cut(s) 575, 1357, 1481, 1507
BanII GRGCYC 3 cut(s) 93, 841, 1015
BbrPI CACGTG 1 cut(s) 321
Bbv12I GWGCWC 4 cut(s) 93, 329, 869, 1015
BbvCI CCTCAGC 1 cut(s) 766
BbvI GCAGC 4 cut(s) 62, 878, 900, 1096
BccI CCATC 3 cut(s) 344, 613, 737
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 1 cut(s) 1028
BciVI GTATCC 2 cut(s) 604, 1584
BclI TGATCA 1 cut(s) 1002
BcnI CCSGG 9 cut(s) 78, 347, 370, 427, 923, 1118, 1119, 1280, 1536
BfoI RGCGCY 3 cut(s) 579, 1485, 1511
BfuAI ACCTGC 2 cut(s) 465, 648
BfuI GTATCC 2 cut(s) 604, 1584
Bme18I GGWCC 3 cut(s) 1023, 1271, 1276
BmeT110I CYCGRG 3 cut(s) 1079, 1117, 1259
BmgBI CACGTC 1 cut(s) 457
BmgT120I GGNCC 9 cut(s) 179, 205, 749, 837, 838, 1023, 1271, 1276, 1281
BmrI ACTGGG 3 cut(s) 448, 835, 1569
BmsI GCATC 2 cut(s) 120, 652
BmuI ACTGGG 3 cut(s) 448, 835, 1569
Bpu10I CCTNAGC 1 cut(s) 766
Bpu14I TTCGAA 1 cut(s) 408
BpuEI CTTGAG 1 cut(s) 999
BpuMI CCSGG 9 cut(s) 78, 347, 370, 427, 923, 1118, 1119, 1280, 1536
BsaAI YACGTR 2 cut(s) 84, 321
BsaHI GRCGYC 4 cut(s) 231, 576, 1482, 1508
BsaJI CCNNGG 5 cut(s) 76, 369, 1026, 1027, 1117
BsaWI WCCGGW 3 cut(s) 1162, 1273, 1312
BsaXI ACNNNNNCTCC 4 cut(s) 245, 275, 859, 889
Bse118I RCCGGY 2 cut(s) 107, 986
Bse1I ACTGG 5 cut(s) 337, 443, 841, 1088, 1575
Bse3DI GCAATG 1 cut(s) 789
BseAI TCCGGA 2 cut(s) 1273, 1312
BseBI CCWGG 1 cut(s) 1028
BseDI CCNNGG 5 cut(s) 76, 369, 1026, 1027, 1117
BseGI GGATG 2 cut(s) 355, 748
BseMI GCAATG 1 cut(s) 789
BseMII CTCAG 2 cut(s) 629, 780
BseNI ACTGG 5 cut(s) 337, 443, 841, 1088, 1575
BseRI GAGGAG 4 cut(s) 83, 106, 149, 638
BseSI GKGCMC 2 cut(s) 841, 1575
BseXI GCAGC 4 cut(s) 62, 878, 900, 1096
BseYI CCCAGC 2 cut(s) 224, 1019
BsgI GTGCAG 1 cut(s) 69
Bsh1236I CGCG 5 cut(s) 64, 565, 754, 851, 1151
Bsh1285I CGRYCG 3 cut(s) 166, 661, 987
BshNI GGYRCC 4 cut(s) 575, 1357, 1481, 1507
BsiEI CGRYCG 3 cut(s) 166, 661, 987
BsiHKAI GWGCWC 4 cut(s) 93, 329, 869, 1015
BsiHKCI CYCGRG 3 cut(s) 1079, 1117, 1259
BslFI GGGAC 4 cut(s) 282, 980, 1036, 1454
BsmFI GGGAC 4 cut(s) 282, 980, 1036, 1454
BsmI GAATGC 2 cut(s) 14, 1417
BsoBI CYCGRG 3 cut(s) 1079, 1117, 1259
Bsp119I TTCGAA 1 cut(s) 408
Bsp120I GGGCCC 1 cut(s) 837
Bsp1286I GDGCHC 6 cut(s) 93, 329, 841, 869, 1015, 1575
Bsp13I TCCGGA 2 cut(s) 1273, 1312
Bsp143I GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
BspCNI CTCAG 2 cut(s) 628, 779
BspEI TCCGGA 2 cut(s) 1273, 1312
BspFNI CGCG 5 cut(s) 64, 565, 754, 851, 1151
BspHI TCATGA 3 cut(s) 303, 1104, 1604
BspMI ACCTGC 2 cut(s) 465, 648
BspPI GGATC 4 cut(s) 301, 781, 908, 965
BspQI GCTCTTC 1 cut(s) 857
BspT104I TTCGAA 1 cut(s) 408
BspT107I GGYRCC 4 cut(s) 575, 1357, 1481, 1507
BsrDI GCAATG 1 cut(s) 789
BsrFI RCCGGY 2 cut(s) 107, 986
BsrI ACTGG 5 cut(s) 337, 443, 841, 1088, 1575
BssAI RCCGGY 2 cut(s) 107, 986
BssECI CCNNGG 5 cut(s) 76, 369, 1026, 1027, 1117
BssMI GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
BssNI GRCGYC 4 cut(s) 231, 576, 1482, 1508
Bst2UI CCWGG 1 cut(s) 1028
Bst4CI ACNGT 8 cut(s) 47, 151, 414, 547, 659, 738, 1126, 1321
Bst6I CTCTTC 2 cut(s) 671, 857
BstACI GRCGYC 4 cut(s) 231, 576, 1482, 1508
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstBAI YACGTR 2 cut(s) 84, 321
BstBI TTCGAA 1 cut(s) 408
BstC8I GCNNGC 7 cut(s) 7, 66, 109, 749, 789, 1334, 1571
BstDEI CTNAG 2 cut(s) 615, 766
BstF5I GGATG 2 cut(s) 355, 748
BstFNI CGCG 5 cut(s) 64, 565, 754, 851, 1151
BstH2I RGCGCY 3 cut(s) 579, 1485, 1511
BstHHI GCGC 6 cut(s) 578, 851, 883, 1403, 1484, 1510
BstKTI GATC 7 cut(s) 309, 703, 776, 903, 960, 1005, 1302
BstMBI GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
BstMCI CGRYCG 3 cut(s) 166, 661, 987
BstMWI GCNNNNNNNGC 7 cut(s) 11, 186, 213, 333, 788, 894, 1409
BstNI CCWGG 1 cut(s) 1028
BstNSI RCATGY 1 cut(s) 946
BstSLI GKGCMC 2 cut(s) 841, 1575
BstUI CGCG 5 cut(s) 64, 565, 754, 851, 1151
BstV1I GCAGC 4 cut(s) 62, 878, 900, 1096
BstXI CCANNNNNNTGG 1 cut(s) 547
BsuI GTATCC 2 cut(s) 604, 1584
BtrI CACGTC 1 cut(s) 457
BtsCI GGATG 2 cut(s) 355, 748
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 3 cut(s) 208, 1131, 1582
BveI ACCTGC 2 cut(s) 465, 648
Cac8I GCNNGC 7 cut(s) 7, 66, 109, 749, 789, 1334, 1571
CciI TCATGA 3 cut(s) 303, 1104, 1604
CfoI GCGC 6 cut(s) 578, 851, 883, 1403, 1484, 1510
Cfr10I RCCGGY 2 cut(s) 107, 986
Cfr13I GGNCC 9 cut(s) 179, 205, 749, 837, 838, 1023, 1271, 1276, 1281
Cfr9I CCCGGG 1 cut(s) 1117
CpoI CGGWCCG 1 cut(s) 1276
CseI GACGC 1 cut(s) 239
Csp6I GTAC 8 cut(s) 81, 481, 631, 697, 844, 1060, 1138, 1322
CspI CGGWCCG 1 cut(s) 1276
CviAII CATG 9 cut(s) 121, 304, 943, 961, 970, 976, 1105, 1546, 1605
CviQI GTAC 8 cut(s) 81, 481, 631, 697, 844, 1060, 1138, 1322
DdeI CTNAG 2 cut(s) 615, 766
DinI GGCGCC 3 cut(s) 577, 1483, 1509
DpnI GATC 7 cut(s) 308, 702, 775, 902, 959, 1004, 1301
DpnII GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
DraIII CACNNNGTG 1 cut(s) 324
EaeI YGGCCR 3 cut(s) 334, 385, 1452
Eam1104I CTCTTC 2 cut(s) 671, 857
EarI CTCTTC 2 cut(s) 671, 857
EciI GGCGGA 1 cut(s) 1521
Ecl136II GAGCTC 2 cut(s) 91, 1013
Eco24I GRGCYC 3 cut(s) 93, 841, 1015
Eco47I GGWCC 3 cut(s) 1023, 1271, 1276
Eco53kI GAGCTC 2 cut(s) 91, 1013
Eco57I CTGAAG 3 cut(s) 260, 608, 1449
Eco72I CACGTG 1 cut(s) 321
Eco88I CYCGRG 3 cut(s) 1079, 1117, 1259
EcoICRI GAGCTC 2 cut(s) 91, 1013
EcoO109I RGGNCCY 2 cut(s) 837, 1023
EcoRII CCWGG 1 cut(s) 1026
EcoT38I GRGCYC 3 cut(s) 93, 841, 1015
EgeI GGCGCC 3 cut(s) 577, 1483, 1509
EheI GGCGCC 3 cut(s) 577, 1483, 1509
FaeI CATG 9 cut(s) 124, 307, 946, 964, 973, 979, 1108, 1549, 1608
FaqI GGGAC 4 cut(s) 282, 980, 1036, 1454
FatI CATG 9 cut(s) 120, 303, 942, 960, 969, 975, 1104, 1545, 1604
FauI CCCGC 7 cut(s) 146, 194, 567, 740, 1071, 1164, 1177
FbaI TGATCA 1 cut(s) 1002
FokI GGATG 2 cut(s) 362, 755
FriOI GRGCYC 3 cut(s) 93, 841, 1015
GlaI GCGC 6 cut(s) 577, 850, 882, 1402, 1483, 1509
GsaI CCCAGC 2 cut(s) 228, 1023
HaeII RGCGCY 3 cut(s) 579, 1485, 1511
HgaI GACGC 1 cut(s) 239
HhaI GCGC 6 cut(s) 578, 851, 883, 1403, 1484, 1510
Hin1I GRCGYC 4 cut(s) 231, 576, 1482, 1508
Hin1II CATG 9 cut(s) 124, 307, 946, 964, 973, 979, 1108, 1549, 1608
Hin6I GCGC 6 cut(s) 576, 849, 881, 1401, 1482, 1508
HinP1I GCGC 6 cut(s) 576, 849, 881, 1401, 1482, 1508
HincII GTYRAC 2 cut(s) 465, 1436
HindII GTYRAC 2 cut(s) 465, 1436
HinfI GANTC 2 cut(s) 496, 1242
HphI GGTGA 7 cut(s) 127, 304, 526, 695, 812, 906, 1012
Hpy166II GTNNAC 2 cut(s) 465, 1436
Hpy188I TCNGA 5 cut(s) 240, 527, 618, 984, 1292
Hpy188III TCNNGA 9 cut(s) 304, 652, 859, 952, 1105, 1274, 1303, 1313, 1605
Hpy8I GTNNAC 2 cut(s) 465, 1436
Hpy99I CGWCG 8 cut(s) 14, 101, 155, 233, 386, 473, 509, 584
HpyAV CCTTC 2 cut(s) 791, 1473
HpyCH4III ACNGT 8 cut(s) 47, 151, 414, 547, 659, 738, 1126, 1321
HpyCH4IV ACGT 6 cut(s) 83, 320, 456, 1109, 1324, 1438
HpyCH4V TGCA 3 cut(s) 50, 124, 643
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 186, 213, 333, 788, 894, 1409
HpyF3I CTNAG 2 cut(s) 615, 766
HpySE526I ACGT 6 cut(s) 83, 320, 456, 1109, 1324, 1438
Hsp92I GRCGYC 4 cut(s) 231, 576, 1482, 1508
Hsp92II CATG 9 cut(s) 124, 307, 946, 964, 973, 979, 1108, 1549, 1608
HspAI GCGC 6 cut(s) 576, 849, 881, 1401, 1482, 1508
KasI GGCGCC 3 cut(s) 575, 1481, 1507
KflI GGGWCCC 1 cut(s) 1023
Kpn2I TCCGGA 2 cut(s) 1273, 1312
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 1 cut(s) 1002
Kzo9I GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
LguI GCTCTTC 1 cut(s) 857
LmnI GCTCC 6 cut(s) 88, 96, 201, 366, 1010, 1534
Lsp1109I GCAGC 4 cut(s) 62, 878, 900, 1096
LweI GCATC 2 cut(s) 120, 652
MaeII ACGT 6 cut(s) 83, 320, 456, 1109, 1324, 1438
MaeIII GTNAC 6 cut(s) 133, 755, 800, 1158, 1325, 1456
MalI GATC 7 cut(s) 308, 702, 775, 902, 959, 1004, 1301
MboI GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
MboII GAAGA 3 cut(s) 658, 664, 874
MhlI GDGCHC 6 cut(s) 93, 329, 841, 869, 1015, 1575
MluCI AATT 7 cut(s) 269, 1211, 1223, 1377, 1390, 1448, 1494
MluI ACGCGT 1 cut(s) 62
Mly113I GGCGCC 3 cut(s) 576, 1482, 1508
MmeI TCCRAC 5 cut(s) 505, 720, 1007, 1315, 1568
MroI TCCGGA 2 cut(s) 1273, 1312
MroNI GCCGGC 1 cut(s) 107
MseI TTAA 1 cut(s) 1389
MslI CAYNNNNRTG 1 cut(s) 974
MspA1I CMGCKG 1 cut(s) 891
Mva1269I GAATGC 2 cut(s) 14, 1417
MvaI CCWGG 1 cut(s) 1028
MvnI CGCG 5 cut(s) 64, 565, 754, 851, 1151
MwoI GCNNNNNNNGC 7 cut(s) 11, 186, 213, 333, 788, 894, 1409
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 3 cut(s) 576, 1482, 1508
NciI CCSGG 9 cut(s) 78, 347, 370, 427, 923, 1118, 1119, 1280, 1536
NdeII GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
NgoMIV GCCGGC 1 cut(s) 107
NlaIII CATG 9 cut(s) 124, 307, 946, 964, 973, 979, 1108, 1549, 1608
NmeAIII GCCGAG 1 cut(s) 1155
NmuCI GTSAC 2 cut(s) 133, 800
NspI RCATGY 1 cut(s) 946
NspV TTCGAA 1 cut(s) 408
PagI TCATGA 3 cut(s) 303, 1104, 1604
PaqCI CACCTGC 1 cut(s) 465
PasI CCCWGGG 1 cut(s) 1027
PciSI GCTCTTC 1 cut(s) 857
PcsI WCGNNNNNNNCGW 6 cut(s) 159, 225, 261, 326, 414, 576
PctI GAATGC 2 cut(s) 14, 1417
PdiI GCCGGC 1 cut(s) 109
PfeI GAWTC 2 cut(s) 496, 1242
PflFI GACNNNGTC 3 cut(s) 440, 716, 971
PflMI CCANNNNNTGG 1 cut(s) 1517
PfoI TCCNGGA 1 cut(s) 345
PluTI GGCGCC 3 cut(s) 579, 1485, 1511
PmaCI CACGTG 1 cut(s) 321
PmlI CACGTG 1 cut(s) 321
Ppu21I YACGTR 2 cut(s) 84, 321
PpuMI RGGWCCY 1 cut(s) 1023
Psp124BI GAGCTC 2 cut(s) 93, 1015
Psp5II RGGWCCY 1 cut(s) 1023
Psp6I CCWGG 1 cut(s) 1026
PspCI CACGTG 1 cut(s) 321
PspFI CCCAGC 2 cut(s) 224, 1019
PspGI CCWGG 1 cut(s) 1026
PspOMI GGGCCC 1 cut(s) 837
PspPI GGNCC 9 cut(s) 179, 205, 749, 837, 838, 1023, 1271, 1276, 1281
PspPPI RGGWCCY 1 cut(s) 1023
PsyI GACNNNGTC 3 cut(s) 440, 716, 971
PvuII CAGCTG 1 cut(s) 891
RsaI GTAC 8 cut(s) 82, 482, 632, 698, 845, 1061, 1139, 1323
RsaNI GTAC 8 cut(s) 81, 481, 631, 697, 844, 1060, 1138, 1322
RseI CAYNNNNRTG 1 cut(s) 974
Rsr2I CGGWCCG 1 cut(s) 1276
RsrII CGGWCCG 1 cut(s) 1276
SacI GAGCTC 2 cut(s) 93, 1015
SapI GCTCTTC 1 cut(s) 857
SaqAI TTAA 1 cut(s) 1389
Sau3AI GATC 7 cut(s) 306, 700, 773, 900, 957, 1002, 1299
Sau96I GGNCC 9 cut(s) 179, 205, 749, 837, 838, 1023, 1271, 1276, 1281
SduI GDGCHC 6 cut(s) 93, 329, 841, 869, 1015, 1575
SfaNI GCATC 2 cut(s) 120, 652
SfoI GGCGCC 3 cut(s) 577, 1483, 1509
SfuI TTCGAA 1 cut(s) 408
SinI GGWCC 3 cut(s) 1023, 1271, 1276
SmaI CCCGGG 1 cut(s) 1119
SmiMI CAYNNNNRTG 1 cut(s) 974
SmlI CTYRAG 1 cut(s) 1014
SmoI CTYRAG 1 cut(s) 1014
Sse9I AATT 7 cut(s) 269, 1211, 1223, 1377, 1390, 1448, 1494
SspDI GGCGCC 3 cut(s) 575, 1481, 1507
SstI GAGCTC 2 cut(s) 93, 1015
TaaI ACNGT 8 cut(s) 47, 151, 414, 547, 659, 738, 1126, 1321
TaiI ACGT 6 cut(s) 86, 323, 459, 1112, 1327, 1441
TaqI TCGA 9 cut(s) 162, 273, 381, 408, 444, 582, 795, 1245, 1302
TaqII GACCGA 2 cut(s) 482, 725
TasI AATT 7 cut(s) 269, 1211, 1223, 1377, 1390, 1448, 1494
TauI GCSGC 8 cut(s) 216, 425, 539, 565, 754, 897, 1363, 1482
TfiI GAWTC 2 cut(s) 496, 1242
Tru1I TTAA 1 cut(s) 1389
Tru9I TTAA 1 cut(s) 1389
TscAI CASTG 3 cut(s) 215, 1131, 1582
TseFI GTSAC 2 cut(s) 133, 800
TseI GCWGC 4 cut(s) 50, 888, 891, 1084
Tsp45I GTSAC 2 cut(s) 133, 800
TspDTI ATGAA 2 cut(s) 658, 1093
TspGWI ACGGA 4 cut(s) 253, 284, 884, 1023
TspMI CCCGGG 1 cut(s) 1117
TspRI CASTG 3 cut(s) 215, 1131, 1582
Tth111I GACNNNGTC 3 cut(s) 440, 716, 971
Van91I CCANNNNNTGG 1 cut(s) 1517
VpaK11BI GGWCC 3 cut(s) 1023, 1271, 1276
XapI RAATTY 2 cut(s) 1211, 1223
XceI RCATGY 1 cut(s) 946
XmaI CCCGGG 1 cut(s) 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.