RLG00000024673

Domain of unknown function (DUF1929)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0017541
Physical Location & Seq
Forward (+)
38087307 .. 38088911
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024673

Sequence Viewer

Length: 1605 bp
ATGGCCTGCGTCGCATTCTCCATACTCGCAGTTGCTCTACTCAACTGTGCAGCTATCTTTACGCGTGCCGACCTCCCCGGAACATGGGAGCTCCTCGTCGCCAACGCCGGCATCTCCTCCATGCACACCGCCGTCACCCGCTTCAACACCGTCGTCCTCCTCGACCGCACCAACATCGGCCCCTCCCGCAAAATGCTCCTCAGGGGCCACTGCCGGAACGACCCCAGAGACGCCTTTCTGAAGCACGACTGCTACGCTCACTCCGTCCAATTCGACCCCCAGACCAACCAAATCCGCCCCCTCATGATCCTCACCGACACGTGGTGCTCGTCCGGCCAGTTCCTCCCTGACGGCACTCTGCTCCAAACCGGCGGCGACCTTGACGGCCACAGAAAAATCCGCAAGTTCGAACCGTGCGAGGCCGCCGGGTCGTGCGACTGGGTCGAGCTTGATGACGTGGAGTTGGCCAACGGGAGGTGGTACGCCACCAACCAGATTCTCCCCGACGGGTCGGTGATTATAGTGGGAGGCAGTGCCGCCAACACAGTGGAGTATTACCCGCCGCGAAACGGCGCCGTCGAGCTGAAGTTTCTAGCTGATGCGGAGGATACTCAGATGGACAACTTGTACCCTTACCTGCATCTCCTCCCTAACGGCCACCTCTTCATCTTCGCTAACAACAAGGCGGTGCTGTACGATCACCAGACCGACAAAGTCGCCAGAGAATATCCACCGTTGGTTGGCGGGCCGCGTAACTACCCCTCAGCCGGATCGTCCGCAATGCTGGCACTCGAAGGTGACTACTCCACCGCCGTCATCGTCGTCTGCGGTGGGGCCCAGTACGGCGCGTTTATCCAGAAGAGCACGGACACTCCCGCGCACGGCAGCTGCGGCCGGATCGTGGCGACTTCGCCCGACCCGGTTTGGGAAATGGAGGACATGCCGTTCGGGCGGATCATGGGGGACATGGTCATGCTTCCGACCGGCGCGGTTTTGGTGATCAACGGAGCTCAAGCTGGGACCCAGGGGTTTGAAATGGCTTCAAACCCGTGTTTGTACCCGCTTCTTTACCGACCCGAGCAGCCAGTCGGGTTGCGGTTCATGACGTTGAACCCGGGAACAGTGCCGAGATTGTACCACTCCACCGCGAACTTGTTACCGGACGGGCGGGTGTTGATTGCGGGAAGTAATCCGCATTACTTCTACAAATTCAAGGCTGAATTTCCCACCGAGTTGAGAATCGAAGCGTTTTCGCCCGAGTATTTGGGTCCGGACCGGGCCAATCTCCGACCCGTGATCGAGGGAGTTCCGGAAACGGTACGTTACGGCGAGCATTTTGAGGTGTTGGTGTCGGTGCCTCTATCTGTGGTGGGAATTGTGGAGGTTAATTTGGGTAGTGCACCTTTTGCCACGCATTCGTTTTCTCAGGGTCAACGTCTGGTCAAATTGGCCGTTACGCCTTCAGTCCCGGACGGCGGCGCCCGATACAGAATTAGTTGTGTGGCACCGCCGAATGGAATGGTGGCTCCGCCGGGCTATTACATGGCATTTGCGGTCAATCAAGGCGTGCCAAGTGTCGCTCGTTGGATACATTTGGTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

535

Amino Acids

58.09

Weight (kDa)

5.7

Isoelectric Point (pI)

35.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 41 - 421 2.3e-170 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 430 - 531 8.1e-28 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017541)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53950
fragaria_vesca FvH4_6g12780
malus_domestica MD04G1138400.v1.1
prunus_persica Prupe.6G264000_v2.0.a1
pyrus_communis pycom04g12650
rosa_chinensis RchiOBHm_Chr3g0464771
rosa_laevigata RLG00000024673
rosa_multiflora Rmu_sc0007114.1_g000012
rosa_roxburghii Rroxscaffold_6G00415430
rosa_rugosa Rorug03G0074000
rosa_samantha Rh3BG136500
rosa_wichuraiana Rw3G011170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 645
AccB1I GGYRCC 4 cut(s) 572, 1354, 1478, 1504
AccII CGCG 7 cut(s) 64, 565, 751, 848, 878, 989, 1148
AccIII TCCGGA 2 cut(s) 1270, 1309
AclWI GGATC 4 cut(s) 301, 778, 905, 962
AcoI YGGCCR 6 cut(s) 334, 385, 465, 655, 892, 1449
AcsI RAATTY 2 cut(s) 1208, 1220
AcuI CTGAAG 3 cut(s) 260, 605, 1446
AcvI CACGTG 1 cut(s) 321
AcyI GRCGYC 3 cut(s) 231, 573, 1479
AdeI CACNNNGTG 1 cut(s) 324
AfaI GTAC 7 cut(s) 482, 629, 695, 842, 1058, 1136, 1320
AflIII ACRYGT 2 cut(s) 62, 318
AgsI TTSAA 5 cut(s) 145, 1034, 1044, 1111, 1213
AjiI CACGTC 1 cut(s) 457
AjnI CCWGG 1 cut(s) 1023
AloI GAACNNNNNNTCC 2 cut(s) 929, 961
AluBI AGCT 8 cut(s) 53, 91, 448, 583, 596, 888, 1010, 1016
AluI AGCT 8 cut(s) 53, 91, 448, 583, 596, 888, 1010, 1016
Alw21I GWGCWC 5 cut(s) 93, 329, 866, 1012, 1402
Alw26I GTCTC 1 cut(s) 222
Alw44I GTGCAC 1 cut(s) 1398
AlwI GGATC 4 cut(s) 301, 778, 905, 962
Ama87I CYCGRG 3 cut(s) 1076, 1114, 1256
Aor13HI TCCGGA 2 cut(s) 1270, 1309
ApaI GGGCCC 1 cut(s) 838
ApaLI GTGCAC 1 cut(s) 1398
ApeKI GCWGC 4 cut(s) 50, 885, 888, 1081
ApoI RAATTY 2 cut(s) 1208, 1220
ArsI GACNNNNNNTTYG 2 cut(s) 929, 961
AspLEI GCGC 5 cut(s) 575, 848, 880, 989, 1481
AspS9I GGNCC 9 cut(s) 179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
AsuC2I CCSGG 8 cut(s) 78, 427, 920, 1115, 1116, 1277, 1469, 1533
AsuHPI GGTGA 6 cut(s) 127, 304, 526, 692, 809, 1009
AsuII TTCGAA 1 cut(s) 408
AvaI CYCGRG 3 cut(s) 1076, 1114, 1256
AvaII GGWCC 3 cut(s) 1020, 1268, 1273
AxyI CCTNAGG 1 cut(s) 200
BaeGI GKGCMC 2 cut(s) 838, 1402
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 4 cut(s) 572, 1354, 1478, 1504
BanII GRGCYC 3 cut(s) 93, 838, 1012
BbrPI CACGTG 1 cut(s) 321
Bbv12I GWGCWC 5 cut(s) 93, 329, 866, 1012, 1402
BbvCI CCTCAGC 1 cut(s) 763
BbvI GCAGC 4 cut(s) 62, 875, 897, 1093
BccI CCATC 1 cut(s) 610
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 1 cut(s) 1025
BciVI GTATCC 2 cut(s) 601, 1581
BclI TGATCA 1 cut(s) 999
BcnI CCSGG 8 cut(s) 78, 427, 920, 1115, 1116, 1277, 1469, 1533
BcoDI GTCTC 1 cut(s) 222
BfaI CTAG 1 cut(s) 593
BfoI RGCGCY 2 cut(s) 576, 1482
BfuAI ACCTGC 1 cut(s) 645
BfuI GTATCC 2 cut(s) 601, 1581
BglI GCCNNNNNGGC 1 cut(s) 949
Bme1390I CCNGG 9 cut(s) 78, 427, 920, 1025, 1115, 1116, 1277, 1469, 1533
Bme18I GGWCC 3 cut(s) 1020, 1268, 1273
BmeT110I CYCGRG 3 cut(s) 1076, 1114, 1256
BmgBI CACGTC 1 cut(s) 457
BmgT120I GGNCC 9 cut(s) 179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
BmrFI CCNGG 9 cut(s) 78, 427, 920, 1025, 1115, 1116, 1277, 1469, 1533
BmrI ACTGGG 2 cut(s) 448, 832
BmsI GCATC 3 cut(s) 120, 589, 649
BmuI ACTGGG 2 cut(s) 448, 832
Bpu10I CCTNAGC 1 cut(s) 763
Bpu14I TTCGAA 1 cut(s) 408
BpuEI CTTGAG 1 cut(s) 996
BpuMI CCSGG 8 cut(s) 78, 427, 920, 1115, 1116, 1277, 1469, 1533
BsaAI YACGTR 1 cut(s) 321
BsaHI GRCGYC 3 cut(s) 231, 573, 1479
BsaJI CCNNGG 4 cut(s) 76, 1023, 1024, 1114
BsaWI WCCGGW 3 cut(s) 1159, 1270, 1309
BsaXI ACNNNNNCTCC 4 cut(s) 245, 275, 856, 886
Bse118I RCCGGY 3 cut(s) 107, 368, 983
Bse1I ACTGG 4 cut(s) 337, 443, 838, 1085
Bse21I CCTNAGG 1 cut(s) 200
Bse3DI GCAATG 1 cut(s) 786
BseAI TCCGGA 2 cut(s) 1270, 1309
BseBI CCWGG 1 cut(s) 1025
BseDI CCNNGG 4 cut(s) 76, 1023, 1024, 1114
BseMI GCAATG 1 cut(s) 786
BseMII CTCAG 4 cut(s) 214, 626, 777, 1439
BseNI ACTGG 4 cut(s) 337, 443, 838, 1085
BseRI GAGGAG 5 cut(s) 83, 106, 149, 188, 635
BseSI GKGCMC 2 cut(s) 838, 1402
BseX3I CGGCCG 1 cut(s) 892
BseXI GCAGC 4 cut(s) 62, 875, 897, 1093
BseYI CCCAGC 1 cut(s) 1016
BsgI GTGCAG 1 cut(s) 69
Bsh1236I CGCG 7 cut(s) 64, 565, 751, 848, 878, 989, 1148
Bsh1285I CGRYCG 3 cut(s) 166, 895, 984
BshNI GGYRCC 4 cut(s) 572, 1354, 1478, 1504
BsiEI CGRYCG 3 cut(s) 166, 895, 984
BsiHKAI GWGCWC 5 cut(s) 93, 329, 866, 1012, 1402
BsiHKCI CYCGRG 3 cut(s) 1076, 1114, 1256
BslFI GGGAC 3 cut(s) 977, 1033, 1451
BsmAI GTCTC 1 cut(s) 222
BsmBI CGTCTC 1 cut(s) 222
BsmFI GGGAC 3 cut(s) 977, 1033, 1451
BsmI GAATGC 2 cut(s) 14, 1414
BsoBI CYCGRG 3 cut(s) 1076, 1114, 1256
Bsp119I TTCGAA 1 cut(s) 408
Bsp120I GGGCCC 1 cut(s) 834
Bsp1286I GDGCHC 6 cut(s) 93, 329, 838, 866, 1012, 1402
Bsp13I TCCGGA 2 cut(s) 1270, 1309
Bsp143I GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
BspCNI CTCAG 4 cut(s) 213, 625, 776, 1438
BspEI TCCGGA 2 cut(s) 1270, 1309
BspFNI CGCG 7 cut(s) 64, 565, 751, 848, 878, 989, 1148
BspHI TCATGA 3 cut(s) 303, 1101, 1601
BspMI ACCTGC 1 cut(s) 645
BspPI GGATC 4 cut(s) 301, 778, 905, 962
BspQI GCTCTTC 1 cut(s) 854
BspT104I TTCGAA 1 cut(s) 408
BspT107I GGYRCC 4 cut(s) 572, 1354, 1478, 1504
BsrDI GCAATG 1 cut(s) 786
BsrFI RCCGGY 3 cut(s) 107, 368, 983
BsrI ACTGG 4 cut(s) 337, 443, 838, 1085
BssAI RCCGGY 3 cut(s) 107, 368, 983
BssECI CCNNGG 4 cut(s) 76, 1023, 1024, 1114
BssMI GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
BssNI GRCGYC 3 cut(s) 231, 573, 1479
Bst2UI CCWGG 1 cut(s) 1025
Bst4CI ACNGT 7 cut(s) 47, 151, 414, 547, 735, 1123, 1318
Bst6I CTCTTC 2 cut(s) 668, 854
BstACI GRCGYC 3 cut(s) 231, 573, 1479
BstAPI GCANNNNNTGC 1 cut(s) 1406
BstBAI YACGTR 1 cut(s) 321
BstBI TTCGAA 1 cut(s) 408
BstC8I GCNNGC 7 cut(s) 7, 66, 109, 746, 786, 1331, 1568
BstDEI CTNAG 4 cut(s) 200, 612, 763, 1425
BstFNI CGCG 7 cut(s) 64, 565, 751, 848, 878, 989, 1148
BstH2I RGCGCY 2 cut(s) 576, 1482
BstHHI GCGC 5 cut(s) 575, 848, 880, 989, 1481
BstKTI GATC 7 cut(s) 309, 700, 773, 900, 957, 1002, 1299
BstMAI GTCTC 1 cut(s) 222
BstMBI GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
BstMCI CGRYCG 3 cut(s) 166, 895, 984
BstMWI GCNNNNNNNGC 7 cut(s) 11, 186, 333, 785, 891, 949, 1406
BstNI CCWGG 1 cut(s) 1025
BstNSI RCATGY 1 cut(s) 943
BstSCI CCNGG 9 cut(s) 76, 425, 918, 1023, 1113, 1114, 1275, 1467, 1531
BstSLI GKGCMC 2 cut(s) 838, 1402
BstUI CGCG 7 cut(s) 64, 565, 751, 848, 878, 989, 1148
BstV1I GCAGC 4 cut(s) 62, 875, 897, 1093
BstXI CCANNNNNNTGG 1 cut(s) 547
BstZI CGGCCG 1 cut(s) 892
Bsu36I CCTNAGG 1 cut(s) 200
BsuI GTATCC 2 cut(s) 601, 1581
BtrI CACGTC 1 cut(s) 457
BtsI GCAGTG 2 cut(s) 208, 538
BtsIMutI CAGTG 4 cut(s) 208, 538, 552, 1128
BveI ACCTGC 1 cut(s) 645
Cac8I GCNNGC 7 cut(s) 7, 66, 109, 746, 786, 1331, 1568
CciI TCATGA 3 cut(s) 303, 1101, 1601
CfoI GCGC 5 cut(s) 575, 848, 880, 989, 1481
Cfr10I RCCGGY 3 cut(s) 107, 368, 983
Cfr13I GGNCC 9 cut(s) 179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
Cfr9I CCCGGG 1 cut(s) 1114
CpoI CGGWCCG 1 cut(s) 1273
CseI GACGC 1 cut(s) 239
Csp6I GTAC 7 cut(s) 481, 628, 694, 841, 1057, 1135, 1319
CspI CGGWCCG 1 cut(s) 1273
CviQI GTAC 7 cut(s) 481, 628, 694, 841, 1057, 1135, 1319
DdeI CTNAG 4 cut(s) 200, 612, 763, 1425
DinI GGCGCC 2 cut(s) 574, 1480
DpnI GATC 7 cut(s) 308, 699, 772, 899, 956, 1001, 1298
DpnII GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
DraIII CACNNNGTG 1 cut(s) 324
EaeI YGGCCR 6 cut(s) 334, 385, 465, 655, 892, 1449
EagI CGGCCG 1 cut(s) 892
Eam1104I CTCTTC 2 cut(s) 668, 854
EarI CTCTTC 2 cut(s) 668, 854
EciI GGCGGA 3 cut(s) 284, 967, 1518
Ecl136II GAGCTC 2 cut(s) 91, 1010
EclXI CGGCCG 1 cut(s) 892
Eco24I GRGCYC 3 cut(s) 93, 838, 1012
Eco47I GGWCC 3 cut(s) 1020, 1268, 1273
Eco52I CGGCCG 1 cut(s) 892
Eco53kI GAGCTC 2 cut(s) 91, 1010
Eco57I CTGAAG 3 cut(s) 260, 605, 1446
Eco72I CACGTG 1 cut(s) 321
Eco81I CCTNAGG 1 cut(s) 200
Eco88I CYCGRG 3 cut(s) 1076, 1114, 1256
EcoICRI GAGCTC 2 cut(s) 91, 1010
EcoO109I RGGNCCY 2 cut(s) 834, 1020
EcoRII CCWGG 1 cut(s) 1023
EcoT38I GRGCYC 3 cut(s) 93, 838, 1012
EgeI GGCGCC 2 cut(s) 574, 1480
EheI GGCGCC 2 cut(s) 574, 1480
Esp3I CGTCTC 1 cut(s) 222
FaqI GGGAC 3 cut(s) 977, 1033, 1451
FauI CCCGC 8 cut(s) 146, 194, 567, 737, 883, 1068, 1161, 1174
FbaI TGATCA 1 cut(s) 999
FriOI GRGCYC 3 cut(s) 93, 838, 1012
FspBI CTAG 1 cut(s) 593
GlaI GCGC 5 cut(s) 574, 847, 879, 988, 1480
GsaI CCCAGC 1 cut(s) 1020
HaeII RGCGCY 2 cut(s) 576, 1482
HgaI GACGC 1 cut(s) 239
HhaI GCGC 5 cut(s) 575, 848, 880, 989, 1481
Hin1I GRCGYC 3 cut(s) 231, 573, 1479
Hin6I GCGC 5 cut(s) 573, 846, 878, 987, 1479
HinP1I GCGC 5 cut(s) 573, 846, 878, 987, 1479
HincII GTYRAC 1 cut(s) 1433
HindII GTYRAC 1 cut(s) 1433
HinfI GANTC 2 cut(s) 496, 1239
HphI GGTGA 6 cut(s) 127, 304, 526, 692, 809, 1009
Hpy166II GTNNAC 2 cut(s) 1400, 1433
Hpy188I TCNGA 4 cut(s) 240, 615, 981, 1289
Hpy188III TCNNGA 6 cut(s) 304, 856, 1102, 1271, 1310, 1602
Hpy8I GTNNAC 2 cut(s) 1400, 1433
Hpy99I CGWCG 6 cut(s) 14, 101, 155, 509, 581, 824
HpyAV CCTTC 2 cut(s) 788, 1470
HpyCH4III ACNGT 7 cut(s) 47, 151, 414, 547, 735, 1123, 1318
HpyCH4IV ACGT 5 cut(s) 320, 456, 1106, 1321, 1435
HpyCH4V TGCA 4 cut(s) 50, 124, 640, 1400
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 186, 333, 785, 891, 949, 1406
HpyF3I CTNAG 4 cut(s) 200, 612, 763, 1425
HpySE526I ACGT 5 cut(s) 320, 456, 1106, 1321, 1435
Hsp92I GRCGYC 3 cut(s) 231, 573, 1479
HspAI GCGC 5 cut(s) 573, 846, 878, 987, 1479
KasI GGCGCC 2 cut(s) 572, 1478
KflI GGGWCCC 1 cut(s) 1020
Kpn2I TCCGGA 2 cut(s) 1270, 1309
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 1 cut(s) 999
Kzo9I GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
LguI GCTCTTC 1 cut(s) 854
LmnI GCTCC 6 cut(s) 88, 96, 201, 366, 1007, 1531
Lsp1109I GCAGC 4 cut(s) 62, 875, 897, 1093
LweI GCATC 3 cut(s) 120, 589, 649
MaeI CTAG 1 cut(s) 593
MaeII ACGT 5 cut(s) 320, 456, 1106, 1321, 1435
MaeIII GTNAC 6 cut(s) 133, 752, 797, 1155, 1322, 1453
MalI GATC 7 cut(s) 308, 699, 772, 899, 956, 1001, 1298
MboI GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
MboII GAAGA 3 cut(s) 655, 661, 871
MhlI GDGCHC 6 cut(s) 93, 329, 838, 866, 1012, 1402
MlsI TGGCCA 1 cut(s) 467
MluCI AATT 7 cut(s) 269, 1208, 1220, 1374, 1387, 1445, 1491
MluI ACGCGT 1 cut(s) 62
MluNI TGGCCA 1 cut(s) 467
Mly113I GGCGCC 2 cut(s) 573, 1479
MmeI TCCRAC 3 cut(s) 1004, 1312, 1565
Mox20I TGGCCA 1 cut(s) 467
MroI TCCGGA 2 cut(s) 1270, 1309
MroNI GCCGGC 1 cut(s) 107
MscI TGGCCA 1 cut(s) 467
MseI TTAA 1 cut(s) 1386
MslI CAYNNNNRTG 1 cut(s) 971
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 1 cut(s) 888
MspR9I CCNGG 9 cut(s) 78, 427, 920, 1025, 1115, 1116, 1277, 1469, 1533
Mva1269I GAATGC 2 cut(s) 14, 1414
MvaI CCWGG 1 cut(s) 1025
MvnI CGCG 7 cut(s) 64, 565, 751, 848, 878, 989, 1148
MwoI GCNNNNNNNGC 7 cut(s) 11, 186, 333, 785, 891, 949, 1406
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 2 cut(s) 573, 1479
NciI CCSGG 8 cut(s) 78, 427, 920, 1115, 1116, 1277, 1469, 1533
NdeII GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
NgoMIV GCCGGC 1 cut(s) 107
NmeAIII GCCGAG 1 cut(s) 1152
NmuCI GTSAC 2 cut(s) 133, 797
NspI RCATGY 1 cut(s) 943
NspV TTCGAA 1 cut(s) 408
PagI TCATGA 3 cut(s) 303, 1101, 1601
PasI CCCWGGG 1 cut(s) 1024
PciSI GCTCTTC 1 cut(s) 854
PcsI WCGNNNNNNNCGW 5 cut(s) 159, 261, 326, 414, 576
PctI GAATGC 2 cut(s) 14, 1414
PdiI GCCGGC 1 cut(s) 109
PfeI GAWTC 2 cut(s) 496, 1239
PflFI GACNNNGTC 3 cut(s) 440, 713, 968
PfoI TCCNGGA 1 cut(s) 1467
PluTI GGCGCC 2 cut(s) 576, 1482
PmaCI CACGTG 1 cut(s) 321
PmlI CACGTG 1 cut(s) 321
Ppu21I YACGTR 1 cut(s) 321
PpuMI RGGWCCY 1 cut(s) 1020
Psp124BI GAGCTC 2 cut(s) 93, 1012
Psp5II RGGWCCY 1 cut(s) 1020
Psp6I CCWGG 1 cut(s) 1023
PspCI CACGTG 1 cut(s) 321
PspFI CCCAGC 1 cut(s) 1016
PspGI CCWGG 1 cut(s) 1023
PspOMI GGGCCC 1 cut(s) 834
PspPI GGNCC 9 cut(s) 179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
PspPPI RGGWCCY 1 cut(s) 1020
PsyI GACNNNGTC 3 cut(s) 440, 713, 968
PvuII CAGCTG 1 cut(s) 888
RsaI GTAC 7 cut(s) 482, 629, 695, 842, 1058, 1136, 1320
RsaNI GTAC 7 cut(s) 481, 628, 694, 841, 1057, 1135, 1319
RseI CAYNNNNRTG 1 cut(s) 971
Rsr2I CGGWCCG 1 cut(s) 1273
RsrII CGGWCCG 1 cut(s) 1273
SacI GAGCTC 2 cut(s) 93, 1012
SapI GCTCTTC 1 cut(s) 854
SaqAI TTAA 1 cut(s) 1386
Sau3AI GATC 7 cut(s) 306, 697, 770, 897, 954, 999, 1296
Sau96I GGNCC 9 cut(s) 179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
ScrFI CCNGG 9 cut(s) 78, 427, 920, 1025, 1115, 1116, 1277, 1469, 1533
SduI GDGCHC 6 cut(s) 93, 329, 838, 866, 1012, 1402
SfaNI GCATC 3 cut(s) 120, 589, 649
SfoI GGCGCC 2 cut(s) 574, 1480
SfuI TTCGAA 1 cut(s) 408
SinI GGWCC 3 cut(s) 1020, 1268, 1273
SmaI CCCGGG 1 cut(s) 1116
SmiMI CAYNNNNRTG 1 cut(s) 971
SmlI CTYRAG 1 cut(s) 1011
SmoI CTYRAG 1 cut(s) 1011
Sse9I AATT 7 cut(s) 269, 1208, 1220, 1374, 1387, 1445, 1491
SspDI GGCGCC 2 cut(s) 572, 1478
SspMI CTAG 1 cut(s) 593
SstI GAGCTC 2 cut(s) 93, 1012
StyD4I CCNGG 9 cut(s) 76, 425, 918, 1023, 1113, 1114, 1275, 1467, 1531
TaaI ACNGT 7 cut(s) 47, 151, 414, 547, 735, 1123, 1318
TaiI ACGT 5 cut(s) 323, 459, 1109, 1324, 1438
TaqI TCGA 8 cut(s) 162, 273, 408, 444, 579, 792, 1242, 1299
TaqII GACCGA 1 cut(s) 722
TasI AATT 7 cut(s) 269, 1208, 1220, 1374, 1387, 1445, 1491
TauI GCSGC 7 cut(s) 375, 425, 539, 565, 751, 894, 1479
TfiI GAWTC 2 cut(s) 496, 1239
Tru1I TTAA 1 cut(s) 1386
Tru9I TTAA 1 cut(s) 1386
TscAI CASTG 4 cut(s) 215, 538, 552, 1128
TseFI GTSAC 2 cut(s) 133, 797
TseI GCWGC 4 cut(s) 50, 885, 888, 1081
Tsp45I GTSAC 2 cut(s) 133, 797
TspDTI ATGAA 2 cut(s) 655, 1090
TspGWI ACGGA 3 cut(s) 253, 881, 1020
TspMI CCCGGG 1 cut(s) 1114
TspRI CASTG 4 cut(s) 215, 538, 552, 1128
Tth111I GACNNNGTC 3 cut(s) 440, 713, 968
VneI GTGCAC 1 cut(s) 1398
VpaK11BI GGWCC 3 cut(s) 1020, 1268, 1273
XapI RAATTY 2 cut(s) 1208, 1220
XceI RCATGY 1 cut(s) 943
XmaI CCCGGG 1 cut(s) 1114
XspI CTAG 1 cut(s) 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.