MD04G1173000.v1.1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0015251
Physical Location & Seq
Forward (+)
26451647 .. 26455162
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1173000.v1.1.491

Sequence Viewer

Length: 1713 bp
ATGATTTTTTTTGCTGTGTCCCTTCGGATAAACATGTGCCTACCTGGTACTGAATCTCGAGCAATTATAAATGGTGGTGATGCTCATGACCTTCTGATTCCAAAGCATCATGGAGCTGGAGATGATAATAAAGAAGAATTGACAATGAGAGCTCTAGGCGTGGAAGGCGGCGGCACCACCACCACAATCACTACCACTACTACTACTTTCATACAGAGCTTTCTGCAACGCCTCCACCACCTTACCACAAATGGCGTACTTGTCCCAAATCTGCCACTTACTGAGATAGCAGAAGAGTTGAGATCGTTCCTAAAGATTGCAGGCCCTATAGTGATGACAAGCATGCTTATATACTCAAGATCTGCGGTTTCAATGCTATTCTTAGGCCGTCTAGGGAAAACAGAATTGGCTGGAGGCTCATTGGCTATAGGGTTTTCTAATATTACAGGCAACTCACTCCTCAGAGGTTTAGCAACGGGGATGGACCCCATTTGTAGCCAAGCTTATGGAGCTCAAAGATGGTCAGTTATGAGTCAAACTTTTCAGAAAACCCTTTGCCTCCTCCTCCTTGTTTCCATCCCTATCGCACTCTTGTGGCTCAACATGGAGCCTATCTTTATATGGTTAGGGCAGGACCCACAAATCACTAGGGTTGCAAAACGTTACATGTTTTTTGCCATTCCTGAATTGCTAGGGCAAGCCCAGCTTATGCCATTGAGAATCCTTTTCAGAACACAAGGGTTAACCACCGCACTAACCCTAGCAGCCGCATTTTCAGCCCTCTTTCATTTACCAATGAACTATTTTTTGGTCATATATTTGGATTTTGGGGTTGCAGGTATTGCATTGGGGCTTGCTTGGAACACTTTTCTTTTTAATTTGGGTTTGGTAATTTATCTAGCCATCTCACCTCATGCTTTGAAGCCATGGCATGGGCTCACCATGCTCTCAGCCTTTCAAGGATGGGGGCCATTGCTAAGATTGTCTCTACCCAGTTGTGTTTCAATTTGCTTGGAGTGGTGGTGGTATGAAATTATGTTGTTCATCTGTGGCTGGTTGAGTAACCCACAAGCAAGTGTTGCAGCAATGGGAATTTTGTTGCAAACAACAGGAATGTTATACATTATCCCAATTTCTCTAAATTCATCCATAGCGACGCGTGTTGGACTATCCCTGGGCGCAGGGCAACCAATCCGTGCACAATGGGCCGCCGTAATTGGGCTTAGCGTGGCATTTGCTTTTGGGATCTTTGCATTCATTCTCATGACTGCTTTGAGGTCCATGTGGGGGACAATGTTCACAAACGATCCACAAATTCTTGATTTGATTTCAACCACACTTCCGCTTTTGGGTTTGTGTGAAGTAGGCAACGTTCCTCAAACGGCTGCCTGTGGAGTGTTAACAGCTACTGCAAGACCTAAGCTTGGAGTAAAAATAAACTTGGTGGCATTTTACCTAATTGGACTGCCAGTCGCTATTCTTGCAACTTTTACGTTTAAAATAGGGTTTTTGGGGCTGTGGATTGGGTTGTTATCATCACAGTTGTGTTGTTTAGGTATGATGGTGTACACATTGATCCATACTGATTGGAGACACCAAACAATAAGGGCTGAGCAGTTGAGTCAGGCTGTGGAAGTGAAAAACCAGACTGAAGAGAACTTAGAGACGACAGAGGATGAAGAACGTGGGCTGCTAACTCCCACTGAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

571

Amino Acids

62.32

Weight (kDa)

6.79

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 109 - 269 1.2e-35 MatE
MatE PF01554 331 - 493 8.4e-31 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38510
fragaria_vesca FvH4_6g10060
malus_domestica MD04G1173000.v1.1 MD12G1186300.v1.1
prunus_persica Prupe.6G291800_v2.0.a1
pyrus_communis pycom12g17490
rosa_chinensis RchiOBHm_Chr3g0460761
rosa_laevigata RLG00000024983
rosa_multiflora Rmu_sc0007678.1_g000022
rosa_roxburghii Rroxscaffold_6G00419240
rosa_rugosa Rorug03G0046100
rosa_samantha Rh3AG103300 Rh3BG106900 Rh3CG108800 Rh3DG108600
rosa_wichuraiana Rw3G008790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 68
Acc36I ACCTGC 1 cut(s) 827
AccB1I GGYRCC 1 cut(s) 173
AccB7I CCANNNNNTGG 1 cut(s) 932
AccII CGCG 1 cut(s) 1159
AciI CCGC 7 cut(s) 168, 171, 365, 750, 768, 1209, 1343
AclI AACGTT 2 cut(s) 661, 1371
AclWI GGATC 3 cut(s) 1253, 1301, 1570
AcsI RAATTY 3 cut(s) 1092, 1141, 1314
AcuI CTGAAG 1 cut(s) 1671
AfaI GTAC 3 cut(s) 49, 258, 1568
AfiI CCNNNNNNNGG 5 cut(s) 932, 1218, 1287, 1349, 1424
AflIII ACRYGT 3 cut(s) 33, 666, 1157
AgsI TTSAA 5 cut(s) 372, 922, 959, 1005, 1332
AhdI GACNNNNNGTC 1 cut(s) 1469
AjnI CCWGG 2 cut(s) 43, 1173
AjuI GAANNNNNNNTTGG 4 cut(s) 389, 421, 791, 823
AleI CACNNNNGTG 2 cut(s) 592, 1543
AluBI AGCT 8 cut(s) 116, 152, 219, 503, 512, 706, 1406, 1423
AluI AGCT 8 cut(s) 116, 152, 219, 503, 512, 706, 1406, 1423
Alw21I GWGCWC 3 cut(s) 154, 514, 1201
Alw26I GTCTC 3 cut(s) 990, 1585, 1658
Alw44I GTGCAC 1 cut(s) 1197
AlwI GGATC 3 cut(s) 1253, 1301, 1570
AlwNI CAGNNNCTG 1 cut(s) 1409
Ama87I CYCGRG 1 cut(s) 57
AoxI GGCC 4 cut(s) 322, 385, 968, 1206
ApaLI GTGCAC 1 cut(s) 1197
ApeKI GCWGC 4 cut(s) 764, 1082, 1385, 1690
ApoI RAATTY 3 cut(s) 1092, 1141, 1314
AspLEI GCGC 1 cut(s) 1181
AspS9I GGNCC 6 cut(s) 323, 484, 634, 968, 1206, 1278
AsuHPI GGTGA 3 cut(s) 89, 900, 931
AvaI CYCGRG 1 cut(s) 57
AvaII GGWCC 3 cut(s) 484, 634, 1278
BaeGI GKGCMC 1 cut(s) 1201
BanI GGYRCC 1 cut(s) 173
BanII GRGCYC 3 cut(s) 154, 514, 939
Bbv12I GWGCWC 3 cut(s) 154, 514, 1201
BbvI GCAGC 4 cut(s) 776, 1094, 1372, 1677
BccI CCATC 6 cut(s) 475, 513, 584, 911, 957, 1555
BceAI ACGGC 3 cut(s) 372, 1196, 1398
BciT130I CCWGG 2 cut(s) 45, 1175
BcoDI GTCTC 3 cut(s) 990, 1585, 1658
BfaI CTAG 6 cut(s) 155, 392, 648, 692, 761, 899
BfmI CTRYAG 2 cut(s) 327, 426
BfuAI ACCTGC 1 cut(s) 827
BglII AGATCT 1 cut(s) 359
BisI GCNGC 8 cut(s) 169, 172, 765, 768, 1083, 1209, 1386, 1691
BlpI GCTNAGC 2 cut(s) 1223, 1611
BlsI GCNGC 8 cut(s) 170, 173, 766, 769, 1084, 1210, 1387, 1692
Bme1390I CCNGG 2 cut(s) 45, 1175
Bme18I GGWCC 3 cut(s) 484, 634, 1278
BmeRI GACNNNNNGTC 1 cut(s) 1469
BmeT110I CYCGRG 1 cut(s) 57
BmgT120I GGNCC 6 cut(s) 323, 484, 634, 968, 1206, 1278
BmiI GGNNCC 5 cut(s) 175, 486, 609, 636, 969
BmrFI CCNGG 2 cut(s) 45, 1175
BmrI ACTGGG 1 cut(s) 987
BmsI GCATC 2 cut(s) 70, 115
BmuI ACTGGG 1 cut(s) 987
BpmI CTGGAG 2 cut(s) 138, 432
Bpu10I CCTNAGC 1 cut(s) 1419
Bpu1102I GCTNAGC 2 cut(s) 1223, 1611
BpuEI CTTGAG 1 cut(s) 340
BsaJI CCNNGG 3 cut(s) 926, 1173, 1174
BsaXI ACNNNNNCTCC 2 cut(s) 1007, 1037
Bsc4I CCNNNNNNNGG 5 cut(s) 932, 1218, 1287, 1349, 1424
Bse1I ACTGG 2 cut(s) 993, 1469
Bse3DI GCAATG 2 cut(s) 971, 1092
BseBI CCWGG 2 cut(s) 45, 1175
BseDI CCNNGG 3 cut(s) 926, 1173, 1174
BseGI GGATG 5 cut(s) 486, 576, 968, 1145, 1681
BseLI CCNNNNNNNGG 5 cut(s) 932, 1218, 1287, 1349, 1424
BseMI GCAATG 2 cut(s) 971, 1092
BseMII CTCAG 4 cut(s) 273, 475, 963, 1602
BseNI ACTGG 2 cut(s) 993, 1469
BseRI GAGGAG 3 cut(s) 449, 551, 554
BseSI GKGCMC 1 cut(s) 1201
BseXI GCAGC 4 cut(s) 776, 1094, 1372, 1677
BseYI CCCAGC 1 cut(s) 702
Bsh1236I CGCG 1 cut(s) 1159
BshFI GGCC 4 cut(s) 324, 387, 970, 1208
BshNI GGYRCC 1 cut(s) 173
BsiHKAI GWGCWC 3 cut(s) 154, 514, 1201
BsiHKCI CYCGRG 1 cut(s) 57
BslFI GGGAC 3 cut(s) 4, 248, 1303
BslI CCNNNNNNNGG 5 cut(s) 932, 1218, 1287, 1349, 1424
BsmAI GTCTC 3 cut(s) 990, 1585, 1658
BsmBI CGTCTC 1 cut(s) 1658
BsmFI GGGAC 3 cut(s) 4, 248, 1303
BsmI GAATGC 1 cut(s) 1253
BsnI GGCC 4 cut(s) 324, 387, 970, 1208
BsoBI CYCGRG 1 cut(s) 57
Bsp1286I GDGCHC 4 cut(s) 154, 514, 939, 1201
Bsp1407I TGTACA 1 cut(s) 1566
Bsp143I GATC 5 cut(s) 302, 359, 1245, 1306, 1575
Bsp1720I GCTNAGC 2 cut(s) 1223, 1611
Bsp19I CCATGG 1 cut(s) 926
BspACI CCGC 7 cut(s) 168, 171, 365, 750, 768, 1209, 1343
BspANI GGCC 4 cut(s) 324, 387, 970, 1208
BspCNI CTCAG 4 cut(s) 274, 474, 962, 1603
BspFNI CGCG 1 cut(s) 1159
BspHI TCATGA 2 cut(s) 85, 1263
BspLI GGNNCC 5 cut(s) 175, 486, 609, 636, 969
BspMI ACCTGC 1 cut(s) 827
BspPI GGATC 3 cut(s) 1253, 1301, 1570
BspT107I GGYRCC 1 cut(s) 173
BsrDI GCAATG 2 cut(s) 971, 1092
BsrGI TGTACA 1 cut(s) 1566
BsrI ACTGG 2 cut(s) 993, 1469
BssECI CCNNGG 3 cut(s) 926, 1173, 1174
BssMI GATC 5 cut(s) 302, 359, 1245, 1306, 1575
BssT1I CCWWGG 1 cut(s) 926
Bst2UI CCWGG 2 cut(s) 45, 1175
Bst4CI ACNGT 1 cut(s) 1542
Bst6I CTCTTC 2 cut(s) 288, 1647
BstAPI GCANNNNNTGC 2 cut(s) 842, 1079
BstAUI TGTACA 1 cut(s) 1566
BstC8I GCNNGC 4 cut(s) 322, 344, 699, 855
BstDEI CTNAG 9 cut(s) 282, 382, 461, 949, 977, 1223, 1419, 1611, 1660
BstDSI CCRYGG 1 cut(s) 926
BstF5I GGATG 5 cut(s) 486, 576, 968, 1145, 1681
BstFNI CGCG 1 cut(s) 1159
BstHHI GCGC 1 cut(s) 1181
BstKTI GATC 5 cut(s) 305, 362, 1248, 1309, 1578
BstMAI GTCTC 3 cut(s) 990, 1585, 1658
BstMBI GATC 5 cut(s) 302, 359, 1245, 1306, 1575
BstMWI GCNNNNNNNGC 9 cut(s) 165, 509, 703, 776, 842, 943, 1079, 1205, 1481
BstNI CCWGG 2 cut(s) 45, 1175
BstNSI RCATGY 3 cut(s) 37, 346, 670
BstSCI CCNGG 2 cut(s) 43, 1173
BstSFI CTRYAG 2 cut(s) 327, 426
BstSLI GKGCMC 1 cut(s) 1201
BstUI CGCG 1 cut(s) 1159
BstV1I GCAGC 4 cut(s) 776, 1094, 1372, 1677
BstX2I RGATCY 2 cut(s) 359, 1245
BstXI CCANNNNNNTGG 1 cut(s) 506
BstYI RGATCY 2 cut(s) 359, 1245
BsuRI GGCC 4 cut(s) 324, 387, 970, 1208
BtgI CCRYGG 1 cut(s) 926
BtsCI GGATG 5 cut(s) 486, 576, 968, 1145, 1681
BtsIMutI CAGTG 1 cut(s) 1701
BveI ACCTGC 1 cut(s) 827
Cac8I GCNNGC 4 cut(s) 322, 344, 699, 855
CaiI CAGNNNCTG 1 cut(s) 1409
CciI TCATGA 2 cut(s) 85, 1263
CfoI GCGC 1 cut(s) 1181
Cfr13I GGNCC 6 cut(s) 323, 484, 634, 968, 1206, 1278
CseI GACGC 1 cut(s) 1165
CsiI ACCWGGT 1 cut(s) 43
Csp6I GTAC 3 cut(s) 48, 257, 1567
CviQI GTAC 3 cut(s) 48, 257, 1567
DdeI CTNAG 9 cut(s) 282, 382, 461, 949, 977, 1223, 1419, 1611, 1660
DpnI GATC 5 cut(s) 304, 361, 1247, 1308, 1577
DpnII GATC 5 cut(s) 302, 359, 1245, 1306, 1575
DraI TTTAAA 1 cut(s) 1498
DriI GACNNNNNGTC 1 cut(s) 1469
Eam1104I CTCTTC 2 cut(s) 288, 1647
Eam1105I GACNNNNNGTC 1 cut(s) 1469
EarI CTCTTC 2 cut(s) 288, 1647
Ecl136II GAGCTC 2 cut(s) 152, 512
Eco130I CCWWGG 1 cut(s) 926
Eco24I GRGCYC 3 cut(s) 154, 514, 939
Eco47I GGWCC 3 cut(s) 484, 634, 1278
Eco53kI GAGCTC 2 cut(s) 152, 512
Eco57I CTGAAG 1 cut(s) 1671
Eco88I CYCGRG 1 cut(s) 57
EcoICRI GAGCTC 2 cut(s) 152, 512
EcoO109I RGGNCCY 2 cut(s) 323, 634
EcoRII CCWGG 2 cut(s) 43, 1173
EcoT14I CCWWGG 1 cut(s) 926
EcoT38I GRGCYC 3 cut(s) 154, 514, 939
ErhI CCWWGG 1 cut(s) 926
Esp3I CGTCTC 1 cut(s) 1658
FalI AAGNNNNNCTT 2 cut(s) 690, 722
FaqI GGGAC 3 cut(s) 4, 248, 1303
Fnu4HI GCNGC 8 cut(s) 169, 172, 765, 768, 1083, 1209, 1386, 1691
FokI GGATG 5 cut(s) 493, 563, 975, 1132, 1688
FriOI GRGCYC 3 cut(s) 154, 514, 939
Fsp4HI GCNGC 8 cut(s) 169, 172, 765, 768, 1083, 1209, 1386, 1691
FspBI CTAG 6 cut(s) 155, 392, 648, 692, 761, 899
GlaI GCGC 1 cut(s) 1180
GluI GCNGC 8 cut(s) 169, 172, 765, 768, 1083, 1209, 1386, 1691
GsaI CCCAGC 1 cut(s) 706
GsuI CTGGAG 2 cut(s) 138, 432
HaeIII GGCC 4 cut(s) 324, 387, 970, 1208
HgaI GACGC 1 cut(s) 1165
HhaI GCGC 1 cut(s) 1181
Hin6I GCGC 1 cut(s) 1179
HinP1I GCGC 1 cut(s) 1179
HincII GTYRAC 2 cut(s) 744, 1401
HindII GTYRAC 2 cut(s) 744, 1401
HindIII AAGCTT 2 cut(s) 501, 1421
HinfI GANTC 5 cut(s) 53, 97, 532, 720, 1621
HpaI GTTAAC 2 cut(s) 744, 1401
HphI GGTGA 3 cut(s) 89, 900, 931
Hpy166II GTNNAC 6 cut(s) 744, 1199, 1299, 1401, 1567, 1569
Hpy188I TCNGA 5 cut(s) 27, 96, 464, 546, 731
Hpy188III TCNNGA 6 cut(s) 57, 86, 357, 683, 1264, 1319
Hpy8I GTNNAC 6 cut(s) 744, 1199, 1299, 1401, 1567, 1569
Hpy99I CGWCG 1 cut(s) 1159
HpyAV CCTTC 3 cut(s) 32, 101, 158
HpyCH4III ACNGT 1 cut(s) 1542
HpyCH4IV ACGT 4 cut(s) 661, 1371, 1493, 1684
HpyF10VI GCNNNNNNNGC 9 cut(s) 165, 509, 703, 776, 842, 943, 1079, 1205, 1481
HpyF3I CTNAG 9 cut(s) 282, 382, 461, 949, 977, 1223, 1419, 1611, 1660
HpySE526I ACGT 4 cut(s) 661, 1371, 1493, 1684
HspAI GCGC 1 cut(s) 1179
KspAI GTTAAC 2 cut(s) 744, 1401
Kzo9I GATC 5 cut(s) 302, 359, 1245, 1306, 1575
LmnI GCTCC 3 cut(s) 113, 509, 607
Lsp1109I GCAGC 4 cut(s) 776, 1094, 1372, 1677
LweI GCATC 2 cut(s) 70, 115
MabI ACCWGGT 1 cut(s) 43
MaeI CTAG 6 cut(s) 155, 392, 648, 692, 761, 899
MaeII ACGT 4 cut(s) 661, 1371, 1493, 1684
MaeIII GTNAC 2 cut(s) 662, 1061
MalI GATC 5 cut(s) 304, 361, 1247, 1308, 1577
MboI GATC 5 cut(s) 302, 359, 1245, 1306, 1575
MboII GAAGA 4 cut(s) 146, 305, 1664, 1691
MflI RGATCY 2 cut(s) 359, 1245
MhlI GDGCHC 4 cut(s) 154, 514, 939, 1201
MluI ACGCGT 1 cut(s) 1157
MlyI GAGTC 2 cut(s) 541, 1630
MmeI TCCRAC 1 cut(s) 1144
MseI TTAA 4 cut(s) 743, 876, 1400, 1497
MslI CAYNNNNRTG 3 cut(s) 592, 1262, 1543
MspR9I CCNGG 2 cut(s) 45, 1175
Mva1269I GAATGC 1 cut(s) 1253
MvaI CCWGG 2 cut(s) 45, 1175
MvnI CGCG 1 cut(s) 1159
MwoI GCNNNNNNNGC 9 cut(s) 165, 509, 703, 776, 842, 943, 1079, 1205, 1481
NcoI CCATGG 1 cut(s) 926
NdeII GATC 5 cut(s) 302, 359, 1245, 1306, 1575
NlaIV GGNNCC 5 cut(s) 175, 486, 609, 636, 969
NspI RCATGY 3 cut(s) 37, 346, 670
OliI CACNNNNGTG 2 cut(s) 592, 1543
PaeI GCATGC 1 cut(s) 346
PaeR7I CTCGAG 1 cut(s) 57
PagI TCATGA 2 cut(s) 85, 1263
PasI CCCWGGG 1 cut(s) 1174
PciI ACATGT 2 cut(s) 33, 666
PctI GAATGC 1 cut(s) 1253
PfeI GAWTC 3 cut(s) 53, 97, 720
PflMI CCANNNNNTGG 1 cut(s) 932
PkrI GCNGC 8 cut(s) 170, 173, 766, 769, 1084, 1210, 1387, 1692
PleI GAGTC 2 cut(s) 540, 1629
PpsI GAGTC 2 cut(s) 540, 1629
PpuMI RGGWCCY 1 cut(s) 634
PscI ACATGT 2 cut(s) 33, 666
PsiI TTATAA 1 cut(s) 68
Psp124BI GAGCTC 2 cut(s) 154, 514
Psp1406I AACGTT 2 cut(s) 661, 1371
Psp5II RGGWCCY 1 cut(s) 634
Psp6I CCWGG 2 cut(s) 43, 1173
PspFI CCCAGC 1 cut(s) 702
PspGI CCWGG 2 cut(s) 43, 1173
PspN4I GGNNCC 5 cut(s) 175, 486, 609, 636, 969
PspPI GGNCC 6 cut(s) 323, 484, 634, 968, 1206, 1278
PspPPI RGGWCCY 1 cut(s) 634
PsrI GAACNNNNNNTAC 2 cut(s) 1356, 1388
PstNI CAGNNNCTG 1 cut(s) 1409
PsuI RGATCY 2 cut(s) 359, 1245
RsaI GTAC 3 cut(s) 49, 258, 1568
RsaNI GTAC 3 cut(s) 48, 257, 1567
RseI CAYNNNNRTG 3 cut(s) 592, 1262, 1543
SacI GAGCTC 2 cut(s) 154, 514
SaqAI TTAA 4 cut(s) 743, 876, 1400, 1497
SatI GCNGC 8 cut(s) 169, 172, 765, 768, 1083, 1209, 1386, 1691
Sau3AI GATC 5 cut(s) 302, 359, 1245, 1306, 1575
Sau96I GGNCC 6 cut(s) 323, 484, 634, 968, 1206, 1278
SchI GAGTC 2 cut(s) 541, 1630
ScrFI CCNGG 2 cut(s) 45, 1175
SduI GDGCHC 4 cut(s) 154, 514, 939, 1201
SexAI ACCWGGT 1 cut(s) 43
SfaNI GCATC 2 cut(s) 70, 115
SfcI CTRYAG 2 cut(s) 327, 426
Sfr274I CTCGAG 1 cut(s) 57
SinI GGWCC 3 cut(s) 484, 634, 1278
SlaI CTCGAG 1 cut(s) 57
SmiMI CAYNNNNRTG 3 cut(s) 592, 1262, 1543
SmlI CTYRAG 2 cut(s) 57, 355
SmoI CTYRAG 2 cut(s) 57, 355
SphI GCATGC 1 cut(s) 346
SsiI CCGC 7 cut(s) 168, 171, 365, 750, 768, 1209, 1343
SspI AATATT 1 cut(s) 442
SspMI CTAG 6 cut(s) 155, 392, 648, 692, 761, 899
SstI GAGCTC 2 cut(s) 154, 514
StyD4I CCNGG 2 cut(s) 43, 1173
StyI CCWWGG 1 cut(s) 926
TaaI ACNGT 1 cut(s) 1542
TaiI ACGT 4 cut(s) 664, 1374, 1496, 1687
TaqI TCGA 1 cut(s) 58
TatI WGTACW 1 cut(s) 1566
TauI GCSGC 4 cut(s) 171, 174, 770, 1211
TfiI GAWTC 3 cut(s) 53, 97, 720
Tru1I TTAA 4 cut(s) 743, 876, 1400, 1497
Tru9I TTAA 4 cut(s) 743, 876, 1400, 1497
TscAI CASTG 1 cut(s) 1708
TseI GCWGC 4 cut(s) 764, 1082, 1385, 1690
TspDTI ATGAA 8 cut(s) 199, 776, 812, 1033, 1044, 1134, 1246, 1692
TspGWI ACGGA 1 cut(s) 1184
TspRI CASTG 1 cut(s) 1708
Van91I CCANNNNNTGG 1 cut(s) 932
VneI GTGCAC 1 cut(s) 1197
VpaK11BI GGWCC 3 cut(s) 484, 634, 1278
XapI RAATTY 3 cut(s) 1092, 1141, 1314
XceI RCATGY 3 cut(s) 37, 346, 670
XhoI CTCGAG 1 cut(s) 57
XspI CTAG 6 cut(s) 155, 392, 648, 692, 761, 899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.