pycom12g17490

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0015251
Physical Location & Seq
Forward (+)
19874838 .. 19877859
3022 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g17490.1

Sequence Viewer

Length: 1680 bp
ATGTGCCTGCCTGGTACTGAATCTCGAGGAATTATAAATGGTGGTGGTGCTCATGACCTTCTGATTCTAAAGCATCATGGAGCTGGAGATCGTAATGAAGAAGACTTGGCAATGAGAGCTAGAGGCGACGAAGGCGGCGCCACCACCACCACAATCACTACCACTACTACTACTTTCATACGGACCTTTCTTCAACGCCTCCCCCACCTTCCCTCCGATGGAGTACTTCCGCGAGAGCTGCCGCTTACTGAGATAGGAGAAGAGTTGAGATCGTTGGTAAAGATTGCAGGCCCTATAGTGATAACATCCATGCTTATATACTCAAGGTCTCTTGTTTCAATGCTATTCTTGGGCCGTCTTGGGAAAACAGAATTGGCTGGAGGCTCATTGGCTCTAGGGTTTTCAAATATTACAGGTTACTCACTCCTCAGAGGTCTATCGACGGGGATGGACCCCATTTGTAGCCAAGCTTATGGAGCTCAAAGATGGTCAGTTATCAGTCAAACTTTTCAGAAAACCCTTTGCCTCCTCCTCCTTGTTGCCATCCCCATCTCACTCTTGTGGCTCAACATGGAGCCCATCTTTATATTGTTAGGGCAGGACCCGCAAATCACTAGGGTTGCAAAACGTTACATGGTTTTTGCCATTCCTGAATTGATAGGGCAAGCTCAGCTTCTACCATTGAGAATCTTTTTCAGAACACAAGGGTTCACCACCGCATTAACCCTAGCAGCCGCATTTTCCGCCCTCTTTCATTTACCTATGAATTATTTTTTGGTCACATATATGGATTTTGGGGTTGCAGGTATTGCCTTAGGGCTTGCTTGGAACACTTTTCTTTTCAATTTGGGTTTGGTAATTTATCTAGCCAGATCACCTCATGCTTTGAAGCCATGGCATGGGCTCACCATGCTCTCAGCCTTTCAAGGATGGGGGCCGTTGCTAAGTTTGTCTCTACCCAGTTGTGTTTCAGTTTGCTTAGAGTGGTGGTGGTATGAACTTATGTTGTTCTTCTGTGGCTGGTTGAGTAACCCACAAGCAAGTGTTGCAGCAATGGGAATTTTGTTGCAAACAACTGGAATGTTATACATTATCCCAATTTCTCTAAGTGGATCCTTATCGACGCGTGTAGGACTCTCGCTGGGCGCAGGGCAACCAACCCGTGCCCAGTGGACCACCCTGATTGGGCTAATCATGGCATTTGCTTGGGGGATTTCCGCGTTCATTTTCATGACTGCTTTTAGGTCCATGTGGGGGACAATGTTCACGAACGATCCACAAATTCTTGATTTGATTTCGACTGCACTTCCAGTTTTGGGCTTGTGTGAAATAGGCAACGTTCCTCAAACGGCTTCCTGTGGAGTGTTAACAGCTACTGCAAGACCTAAGCTTGGTGTAAAAATAAACTTGTTGGCATTTTACCTAATTGGACTGCCAGTTGCTATTCTTGCGACTTTTACGTTTAAAATAGGGTTTTTGGGGCTGTGGTTTGGGCTGCTTTCAGCACAGTTGTCTTGTGTGGGTATGATGGTGTACACATTGCTCCACACTGATTGGAAACACCAAACAAGAAGGGCTGAGCAGCTGACTCAGGCTGTGGAAGTGAAAAACGAAATTGAAGAGAACTTAGAGAAGATAGATGATGAAGAAAGTGGGCTGCTAACTCCTACTGAAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

560

Amino Acids

61.14

Weight (kDa)

6.76

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 98 - 258 4e-37 MatE
MatE PF01554 320 - 482 1.4e-31 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38510
fragaria_vesca FvH4_6g10060
malus_domestica MD04G1173000.v1.1 MD12G1186300.v1.1
prunus_persica Prupe.6G291800_v2.0.a1
pyrus_communis pycom12g17490
rosa_chinensis RchiOBHm_Chr3g0460761
rosa_laevigata RLG00000024983
rosa_multiflora Rmu_sc0007678.1_g000022
rosa_roxburghii Rroxscaffold_6G00419240
rosa_rugosa Rorug03G0046100
rosa_samantha Rh3AG103300 Rh3BG106900 Rh3CG108800 Rh3DG108600
rosa_wichuraiana Rw3G008790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 35
Acc36I ACCTGC 1 cut(s) 794
AccB1I GGYRCC 1 cut(s) 137
AccB7I CCANNNNNTGG 1 cut(s) 899
AccII CGCG 3 cut(s) 232, 1126, 1220
AciI CCGC 8 cut(s) 135, 230, 242, 605, 717, 735, 744, 1218
AclI AACGTT 2 cut(s) 628, 1338
AclWI GGATC 3 cut(s) 1107, 1120, 1268
AcsI RAATTY 2 cut(s) 1059, 1281
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 3 cut(s) 16, 225, 1535
AfiI CCNNNNNNNGG 6 cut(s) 218, 899, 1185, 1254, 1316, 1391
AflIII ACRYGT 1 cut(s) 1124
AgsI TTSAA 7 cut(s) 194, 339, 405, 844, 889, 926, 1619
AjnI CCWGG 1 cut(s) 10
AjuI GAANNNNNNNTTGG 4 cut(s) 356, 388, 758, 790
AleI CACNNNNGTG 1 cut(s) 559
Alw21I GWGCWC 2 cut(s) 52, 481
Alw26I GTCTC 2 cut(s) 333, 957
AlwI GGATC 3 cut(s) 1107, 1120, 1268
AlwNI CAGNNNCTG 1 cut(s) 1376
Ama87I CYCGRG 1 cut(s) 24
AoxI GGCC 3 cut(s) 289, 352, 935
ApeKI GCWGC 6 cut(s) 238, 731, 1049, 1495, 1582, 1657
ApoI RAATTY 2 cut(s) 1059, 1281
AspLEI GCGC 2 cut(s) 140, 1148
AspS9I GGNCC 8 cut(s) 183, 290, 352, 451, 601, 935, 1173, 1245
AsuHPI GGTGA 3 cut(s) 703, 867, 898
AvaI CYCGRG 1 cut(s) 24
AvaII GGWCC 5 cut(s) 183, 451, 601, 1173, 1245
AxyI CCTNAGG 1 cut(s) 814
BaeGI GKGCMC 1 cut(s) 1168
BamHI GGATCC 1 cut(s) 1112
BanI GGYRCC 1 cut(s) 137
BanII GRGCYC 3 cut(s) 481, 579, 906
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 2 cut(s) 52, 481
BbvI GCAGC 6 cut(s) 225, 743, 1061, 1482, 1594, 1644
BccI CCATC 8 cut(s) 212, 442, 480, 551, 557, 587, 924, 1522
BceAI ACGGC 3 cut(s) 339, 922, 1365
BciT130I CCWGG 1 cut(s) 12
BcoDI GTCTC 2 cut(s) 333, 957
BfaI CTAG 5 cut(s) 120, 395, 615, 728, 866
BfmI CTRYAG 1 cut(s) 294
BfoI RGCGCY 1 cut(s) 141
BfuAI ACCTGC 1 cut(s) 794
BisI GCNGC 9 cut(s) 136, 239, 242, 732, 735, 1050, 1496, 1583, 1658
BlpI GCTNAGC 2 cut(s) 669, 1578
BlsI GCNGC 9 cut(s) 137, 240, 243, 733, 736, 1051, 1497, 1584, 1659
BmcAI AGTACT 1 cut(s) 225
Bme1390I CCNGG 1 cut(s) 12
Bme18I GGWCC 5 cut(s) 183, 451, 601, 1173, 1245
BmeT110I CYCGRG 1 cut(s) 24
BmgT120I GGNCC 8 cut(s) 183, 290, 352, 451, 601, 935, 1173, 1245
BmiI GGNNCC 6 cut(s) 139, 453, 576, 603, 936, 1114
BmrFI CCNGG 1 cut(s) 12
BmrI ACTGGG 2 cut(s) 954, 1162
BmsI GCATC 1 cut(s) 82
BmuI ACTGGG 2 cut(s) 954, 1162
BpiI GAAGAC 1 cut(s) 108
BpmI CTGGAG 2 cut(s) 105, 399
Bpu10I CCTNAGC 1 cut(s) 1386
Bpu1102I GCTNAGC 2 cut(s) 669, 1578
BpuEI CTTGAG 1 cut(s) 307
BsaBI GATNNNNATC 1 cut(s) 1117
BsaHI GRCGYC 1 cut(s) 138
BsaI GGTCTC 1 cut(s) 333
BsaJI CCNNGG 1 cut(s) 893
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 6 cut(s) 218, 899, 1185, 1254, 1316, 1391
Bse1I ACTGG 5 cut(s) 960, 1081, 1168, 1310, 1436
Bse21I CCTNAGG 1 cut(s) 814
Bse3DI GCAATG 3 cut(s) 117, 1059, 1538
Bse8I GATNNNNATC 1 cut(s) 1117
BseBI CCWGG 1 cut(s) 12
BseDI CCNNGG 1 cut(s) 893
BseGI GGATG 4 cut(s) 305, 453, 543, 935
BseJI GATNNNNATC 1 cut(s) 1117
BseLI CCNNNNNNNGG 6 cut(s) 218, 899, 1185, 1254, 1316, 1391
BseMI GCAATG 3 cut(s) 117, 1059, 1538
BseMII CTCAG 6 cut(s) 240, 442, 683, 930, 1569, 1604
BseNI ACTGG 5 cut(s) 960, 1081, 1168, 1310, 1436
BseRI GAGGAG 3 cut(s) 416, 518, 521
BseSI GKGCMC 1 cut(s) 1168
BseXI GCAGC 6 cut(s) 225, 743, 1061, 1482, 1594, 1644
BseYI CCCAGC 1 cut(s) 1141
BsgI GTGCAG 1 cut(s) 1287
Bsh1236I CGCG 3 cut(s) 232, 1126, 1220
BshFI GGCC 3 cut(s) 291, 354, 937
BshNI GGYRCC 1 cut(s) 137
BsiHKAI GWGCWC 2 cut(s) 52, 481
BsiHKCI CYCGRG 1 cut(s) 24
BslFI GGGAC 1 cut(s) 1270
BslI CCNNNNNNNGG 6 cut(s) 218, 899, 1185, 1254, 1316, 1391
BsmAI GTCTC 2 cut(s) 333, 957
BsmFI GGGAC 1 cut(s) 1270
BsnI GGCC 3 cut(s) 291, 354, 937
Bso31I GGTCTC 1 cut(s) 333
BsoBI CYCGRG 1 cut(s) 24
Bsp1286I GDGCHC 5 cut(s) 52, 481, 579, 906, 1168
Bsp1407I TGTACA 1 cut(s) 1533
Bsp143I GATC 5 cut(s) 88, 269, 872, 1112, 1273
Bsp1720I GCTNAGC 2 cut(s) 669, 1578
Bsp19I CCATGG 1 cut(s) 893
BspACI CCGC 8 cut(s) 135, 230, 242, 605, 717, 735, 744, 1218
BspANI GGCC 3 cut(s) 291, 354, 937
BspCNI CTCAG 6 cut(s) 241, 441, 682, 929, 1570, 1603
BspFNI CGCG 3 cut(s) 232, 1126, 1220
BspHI TCATGA 2 cut(s) 52, 1230
BspLI GGNNCC 6 cut(s) 139, 453, 576, 603, 936, 1114
BspMI ACCTGC 1 cut(s) 794
BspPI GGATC 3 cut(s) 1107, 1120, 1268
BspT107I GGYRCC 1 cut(s) 137
BspTNI GGTCTC 1 cut(s) 333
BsrDI GCAATG 3 cut(s) 117, 1059, 1538
BsrGI TGTACA 1 cut(s) 1533
BsrI ACTGG 5 cut(s) 960, 1081, 1168, 1310, 1436
BssECI CCNNGG 1 cut(s) 893
BssMI GATC 5 cut(s) 88, 269, 872, 1112, 1273
BssNI GRCGYC 1 cut(s) 138
BssT1I CCWWGG 1 cut(s) 893
Bst2UI CCWGG 1 cut(s) 12
Bst4CI ACNGT 1 cut(s) 1509
Bst6I CTCTTC 2 cut(s) 255, 1614
BstACI GRCGYC 1 cut(s) 138
BstAPI GCANNNNNTGC 2 cut(s) 809, 1046
BstAUI TGTACA 1 cut(s) 1533
BstC8I GCNNGC 4 cut(s) 8, 289, 666, 822
BstDSI CCRYGG 1 cut(s) 893
BstF5I GGATG 4 cut(s) 305, 453, 543, 935
BstFNI CGCG 3 cut(s) 232, 1126, 1220
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 2 cut(s) 140, 1148
BstKTI GATC 5 cut(s) 91, 272, 875, 1115, 1276
BstMAI GTCTC 2 cut(s) 333, 957
BstMBI GATC 5 cut(s) 88, 269, 872, 1112, 1273
BstNI CCWGG 1 cut(s) 12
BstSCI CCNGG 1 cut(s) 10
BstSFI CTRYAG 1 cut(s) 294
BstSLI GKGCMC 1 cut(s) 1168
BstUI CGCG 3 cut(s) 232, 1126, 1220
BstV1I GCAGC 6 cut(s) 225, 743, 1061, 1482, 1594, 1644
BstV2I GAAGAC 1 cut(s) 108
BstX2I RGATCY 1 cut(s) 1112
BstXI CCANNNNNNTGG 1 cut(s) 473
BstYI RGATCY 1 cut(s) 1112
Bsu36I CCTNAGG 1 cut(s) 814
BsuRI GGCC 3 cut(s) 291, 354, 937
BtgI CCRYGG 1 cut(s) 893
BtsCI GGATG 4 cut(s) 305, 453, 543, 935
BtsIMutI CAGTG 2 cut(s) 1175, 1548
BveI ACCTGC 1 cut(s) 794
Cac8I GCNNGC 4 cut(s) 8, 289, 666, 822
CaiI CAGNNNCTG 1 cut(s) 1376
CciI TCATGA 2 cut(s) 52, 1230
CfoI GCGC 2 cut(s) 140, 1148
Cfr13I GGNCC 8 cut(s) 183, 290, 352, 451, 601, 935, 1173, 1245
CseI GACGC 1 cut(s) 1132
Csp6I GTAC 3 cut(s) 15, 224, 1534
CspCI CAANNNNNGTGG 4 cut(s) 1165, 1200, 1535, 1570
CviQI GTAC 3 cut(s) 15, 224, 1534
DinI GGCGCC 1 cut(s) 139
DpnI GATC 5 cut(s) 90, 271, 874, 1114, 1275
DpnII GATC 5 cut(s) 88, 269, 872, 1112, 1273
DraI TTTAAA 1 cut(s) 1465
Eam1104I CTCTTC 2 cut(s) 255, 1614
EarI CTCTTC 2 cut(s) 255, 1614
EciI GGCGGA 1 cut(s) 733
Ecl136II GAGCTC 1 cut(s) 479
Eco130I CCWWGG 1 cut(s) 893
Eco24I GRGCYC 3 cut(s) 481, 579, 906
Eco31I GGTCTC 1 cut(s) 333
Eco47I GGWCC 5 cut(s) 183, 451, 601, 1173, 1245
Eco53kI GAGCTC 1 cut(s) 479
Eco81I CCTNAGG 1 cut(s) 814
Eco88I CYCGRG 1 cut(s) 24
EcoICRI GAGCTC 1 cut(s) 479
EcoO109I RGGNCCY 2 cut(s) 290, 601
EcoRII CCWGG 1 cut(s) 10
EcoT14I CCWWGG 1 cut(s) 893
EcoT38I GRGCYC 3 cut(s) 481, 579, 906
EgeI GGCGCC 1 cut(s) 139
EheI GGCGCC 1 cut(s) 139
ErhI CCWWGG 1 cut(s) 893
FalI AAGNNNNNCTT 2 cut(s) 657, 689
FaqI GGGAC 1 cut(s) 1270
FauI CCCGC 1 cut(s) 612
Fnu4HI GCNGC 9 cut(s) 136, 239, 242, 732, 735, 1050, 1496, 1583, 1658
FokI GGATG 4 cut(s) 292, 460, 530, 942
FriOI GRGCYC 3 cut(s) 481, 579, 906
Fsp4HI GCNGC 9 cut(s) 136, 239, 242, 732, 735, 1050, 1496, 1583, 1658
FspBI CTAG 5 cut(s) 120, 395, 615, 728, 866
GlaI GCGC 2 cut(s) 139, 1147
GluI GCNGC 9 cut(s) 136, 239, 242, 732, 735, 1050, 1496, 1583, 1658
GsaI CCCAGC 1 cut(s) 1145
GsuI CTGGAG 2 cut(s) 105, 399
HaeII RGCGCY 1 cut(s) 141
HaeIII GGCC 3 cut(s) 291, 354, 937
HgaI GACGC 1 cut(s) 1132
HhaI GCGC 2 cut(s) 140, 1148
Hin1I GRCGYC 1 cut(s) 138
Hin6I GCGC 2 cut(s) 138, 1146
HinP1I GCGC 2 cut(s) 138, 1146
HincII GTYRAC 1 cut(s) 1368
HindII GTYRAC 1 cut(s) 1368
HindIII AAGCTT 2 cut(s) 468, 1388
HinfI GANTC 5 cut(s) 20, 64, 687, 1134, 1588
HpaI GTTAAC 1 cut(s) 1368
HphI GGTGA 3 cut(s) 703, 867, 898
Hpy166II GTNNAC 6 cut(s) 711, 1173, 1266, 1368, 1534, 1536
Hpy188I TCNGA 6 cut(s) 63, 217, 431, 513, 698, 1679
Hpy188III TCNNGA 6 cut(s) 24, 53, 650, 1231, 1267, 1286
Hpy8I GTNNAC 6 cut(s) 711, 1173, 1266, 1368, 1534, 1536
Hpy99I CGWCG 3 cut(s) 131, 445, 1126
HpyAV CCTTC 4 cut(s) 68, 125, 218, 1566
HpyCH4III ACNGT 1 cut(s) 1509
HpyCH4IV ACGT 3 cut(s) 628, 1338, 1460
HpyCH4V TGCA 7 cut(s) 287, 623, 803, 1049, 1069, 1304, 1379
HpySE526I ACGT 3 cut(s) 628, 1338, 1460
Hsp92I GRCGYC 1 cut(s) 138
HspAI GCGC 2 cut(s) 138, 1146
KasI GGCGCC 1 cut(s) 137
KspAI GTTAAC 1 cut(s) 1368
Kzo9I GATC 5 cut(s) 88, 269, 872, 1112, 1273
LmnI GCTCC 4 cut(s) 80, 476, 574, 1548
Lsp1109I GCAGC 6 cut(s) 225, 743, 1061, 1482, 1594, 1644
LweI GCATC 1 cut(s) 82
MaeI CTAG 5 cut(s) 120, 395, 615, 728, 866
MaeII ACGT 3 cut(s) 628, 1338, 1460
MaeIII GTNAC 4 cut(s) 416, 629, 778, 1028
MalI GATC 5 cut(s) 90, 271, 874, 1114, 1275
MboI GATC 5 cut(s) 88, 269, 872, 1112, 1273
MboII GAAGA 8 cut(s) 110, 113, 182, 272, 1003, 1631, 1645, 1658
MflI RGATCY 1 cut(s) 1112
MhlI GDGCHC 5 cut(s) 52, 481, 579, 906, 1168
MluI ACGCGT 1 cut(s) 1124
Mly113I GGCGCC 1 cut(s) 138
MlyI GAGTC 2 cut(s) 1128, 1582
MseI TTAA 3 cut(s) 722, 1367, 1464
MslI CAYNNNNRTG 3 cut(s) 559, 785, 1229
MspA1I CMGCKG 1 cut(s) 1585
MspR9I CCNGG 1 cut(s) 12
MvaI CCWGG 1 cut(s) 12
MvnI CGCG 3 cut(s) 232, 1126, 1220
NarI GGCGCC 1 cut(s) 138
NcoI CCATGG 1 cut(s) 893
NdeII GATC 5 cut(s) 88, 269, 872, 1112, 1273
NlaIV GGNNCC 6 cut(s) 139, 453, 576, 603, 936, 1114
NmuCI GTSAC 1 cut(s) 778
OliI CACNNNNGTG 1 cut(s) 559
PaeR7I CTCGAG 1 cut(s) 24
PagI TCATGA 2 cut(s) 52, 1230
PfeI GAWTC 3 cut(s) 20, 64, 687
PflMI CCANNNNNTGG 1 cut(s) 899
PkrI GCNGC 9 cut(s) 137, 240, 243, 733, 736, 1051, 1497, 1584, 1659
PleI GAGTC 2 cut(s) 1128, 1582
PluTI GGCGCC 1 cut(s) 141
PpsI GAGTC 2 cut(s) 1128, 1582
PpuMI RGGWCCY 1 cut(s) 601
PsiI TTATAA 1 cut(s) 35
Psp124BI GAGCTC 1 cut(s) 481
Psp1406I AACGTT 2 cut(s) 628, 1338
Psp5II RGGWCCY 1 cut(s) 601
Psp6I CCWGG 1 cut(s) 10
PspFI CCCAGC 1 cut(s) 1141
PspGI CCWGG 1 cut(s) 10
PspN4I GGNNCC 6 cut(s) 139, 453, 576, 603, 936, 1114
PspPI GGNCC 8 cut(s) 183, 290, 352, 451, 601, 935, 1173, 1245
PspPPI RGGWCCY 1 cut(s) 601
PstNI CAGNNNCTG 1 cut(s) 1376
PsuI RGATCY 1 cut(s) 1112
PvuII CAGCTG 1 cut(s) 1585
RsaI GTAC 3 cut(s) 16, 225, 1535
RsaNI GTAC 3 cut(s) 15, 224, 1534
RseI CAYNNNNRTG 3 cut(s) 559, 785, 1229
SacI GAGCTC 1 cut(s) 481
SaqAI TTAA 3 cut(s) 722, 1367, 1464
SatI GCNGC 9 cut(s) 136, 239, 242, 732, 735, 1050, 1496, 1583, 1658
Sau3AI GATC 5 cut(s) 88, 269, 872, 1112, 1273
Sau96I GGNCC 8 cut(s) 183, 290, 352, 451, 601, 935, 1173, 1245
ScaI AGTACT 1 cut(s) 225
SchI GAGTC 2 cut(s) 1128, 1582
ScrFI CCNGG 1 cut(s) 12
SduI GDGCHC 5 cut(s) 52, 481, 579, 906, 1168
SfaNI GCATC 1 cut(s) 82
SfcI CTRYAG 1 cut(s) 294
SfoI GGCGCC 1 cut(s) 139
Sfr274I CTCGAG 1 cut(s) 24
SinI GGWCC 5 cut(s) 183, 451, 601, 1173, 1245
SlaI CTCGAG 1 cut(s) 24
SmiMI CAYNNNNRTG 3 cut(s) 559, 785, 1229
SmlI CTYRAG 2 cut(s) 24, 322
SmoI CTYRAG 2 cut(s) 24, 322
SsiI CCGC 8 cut(s) 135, 230, 242, 605, 717, 735, 744, 1218
SspDI GGCGCC 1 cut(s) 137
SspI AATATT 1 cut(s) 409
SspMI CTAG 5 cut(s) 120, 395, 615, 728, 866
SstI GAGCTC 1 cut(s) 481
StyD4I CCNGG 1 cut(s) 10
StyI CCWWGG 1 cut(s) 893
TaaI ACNGT 1 cut(s) 1509
TaiI ACGT 3 cut(s) 631, 1341, 1463
TaqI TCGA 4 cut(s) 25, 440, 1121, 1298
TatI WGTACW 2 cut(s) 223, 1533
TauI GCSGC 3 cut(s) 138, 244, 737
TfiI GAWTC 3 cut(s) 20, 64, 687
Tru1I TTAA 3 cut(s) 722, 1367, 1464
Tru9I TTAA 3 cut(s) 722, 1367, 1464
TscAI CASTG 2 cut(s) 1175, 1555
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 6 cut(s) 238, 731, 1049, 1495, 1582, 1657
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 8 cut(s) 111, 166, 743, 779, 1011, 1213, 1219, 1659
TspGWI ACGGA 1 cut(s) 196
TspRI CASTG 2 cut(s) 1175, 1555
Van91I CCANNNNNTGG 1 cut(s) 899
VpaK11BI GGWCC 5 cut(s) 183, 451, 601, 1173, 1245
XapI RAATTY 2 cut(s) 1059, 1281
XhoI CTCGAG 1 cut(s) 24
XspI CTAG 5 cut(s) 120, 395, 615, 728, 866
ZrmI AGTACT 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.