Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003312

Physical Location & Seq

Genomic Coordinates Reverse (-)

28882044 .. 28884606

Gene Structure 2563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1203200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGTTGACGTCTGTTGGTTACAAATTATTTGCAGAGGGGACAACGTCTCTAGAAGAATATGTCTCATTCTTAAAGTCCATTGTTGGCATTCGTGTCCTTGTGGAAGCTATAGGAATCGGGAAAGGGAAAGAAGATCTCACAGGCTTTGCCCTGGAACCTGGAAAGAACAACCAAGAGCTTCTAGCTTGTCCAAAATTACCCGCTGGCAAAGCATTTAGTTCTCTTACATTCAGTGAAATAATTAAATATTTGACCGGAGGGGTTCGGTTGAGCAAAGGGCGGTCTAACGATATCTTTTGGGAGGCTGTTTGGCCGCGTTTGCTAGAAAATGGATGGCATTCTGAGCAACCTACACATTCTCTGGTTTTTCTTACGCCTGGCATAAAGAAGTTCAAAAGAAGAAAATTGACAAGGGGACAGCAGTATTTTGATTCTGTTAGTGATGTTCTGAACAAAGTGGCATCTGAACCAGAACTTATTCAGCTTCAAGGTGAAGAAGAACTTGTTCCAGAGGCGACATCAGACCAAGATGATCTATCTAATCATCAACGCCATTGCTACCTCAAACCTAGGGTCGCTACTAGCAAACCAAACCGGATGCAGTTCACTGTTGTTGACACCAGTTTGGTCCATGGGGGAAAATCACAAGGCATAGTGGAACTGAGATACTCACCAGTTGAAATCCAAAGTAATCCGGAAAAAAACAATTGTTCAAGAGAAAATGAAGGGGACTCTCGTGAGAATAAATTAAATGAACATGAGAATGATACTGCTGAAATGCAGTTGAACAGTAAACCCAATATGGCCAAGCACCTGAAGCGTAAGAGGTTCACGATTGTCGACACCAGTCTAGTTCATAGAGGAAAATCATCAAAAGTTACAGAACTGAGATGCTCACCAACTGTATTTGAAAGTGTTTCTAAGTCAACTGGTCTTTTACGAGAAATTGAAGAAACTTCTTTTGCGGATTTATTGGGCAAGCATAAGCCTGATGCTGCTGATATTTCATTGGATGGTGAAGTGAATAACTTCAGTGACAACTGCCATAGGGATACATCGGATATTGGTGGTACAAACCAAATGGAAGTACCAAATAAGGAAGATTCTGAAGAAAAAATAGAGGGCCACCCGGATAAAAAAATTGGCATGTCCGATAACAAGAAGCTGAAGAGTACTACATTACATAAATTTAGTCGGAAAGAAAAATATAAACATTCAAATTCTGTATGTCCTCTCCCCAAACGGCGAAGATTAGCTGCTTGTGCTAAGGGAGAAACAGGTTGCCTCGTCAACACTTGCTCTCAAGGTTTGGAGTCAGAAGAAGTGGGCCCTCATGGCACCTTGAGTTCTCTAAATGTAGGCGAGCTTGTTGTTTCTCTAGCGGGTCCTCTTGAAAGGGAGCCATCAATTGCTTCTCTTGCTGAAGGTGGTCCAGTAAAGGAGACTACTTCTGAAACTCGTGGTGGGAATTGTTCAGGTGAGCGCATGTCGCATGAGAAGAATGAGAATCATCAAGACCAGGAATCATCCAGGCTCAACCTACGTGATTCGATGGACAGTGAAAACGTTGTTGTGGTCAACCTGGAAATAAATGTAGACAGTCCGTGTCTCCCATTAAGTGAAACACATGTTGTAGACACCTTGAGTGCCTCTAACATGATCTCTAGGAGGCAAAGCACAAGAAACCGACCGCTAACAGCTAAAGCATTGGAAGCTCTTGCAGACGGGTTATTAGGCTTTAAAAAGAGAAAAAAGCACTCAGAAGATGTCCCTGGGGTAAAGCGAGTCTCAAAATCCTCCAGTAAGGCCCGGAGGAGAGTCAAGGTAACATCAAGTCATGCTGATACTGTTAGTGAAGTTGGGGCTTCAGAAGAAAACAAGGTGAATGAAGCTTTGAATGTTAGCAAAGATACAGATAGCAAACCTCTTGATCAAACTGGAGAAAAGTGGCCAACTGGCTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

655

Amino Acids

72.17

Weight (kDa)

7.04

Isoelectric Point (pI)

42.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	7 - 40	3.7e-07	Domain of unknown function (DUF7952)
DUF7650	PF24662	78 - 157	1e-36	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09040 AT1G09050 AT1G09050 AT1G55050 AT1G55050
fragaria_vesca	FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260 FvH4_6g06260
malus_domestica	MD04G1203200.v1.1 MD12G1216900.v1.1
prunus_persica	Prupe.6G323200_v2.0.a1 Prupe.6G323200_v2.0.a1 Prupe.6G323200_v2.0.a1 Prupe.6G323200_v2.0.a1 Prupe.6G323200_v2.0.a1
pyrus_communis	pycom04g17940 pycom12g20240
rosa_chinensis	RchiOBHm_Chr3g0455281
rosa_laevigata	RLG00000025372
rosa_multiflora	Rmu_sc0002169.1_g000039 Rmu_sc0002169.1_g000040 Rmu_sc0029206.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424400
rosa_rugosa	Rorug03G0005900
rosa_samantha	Rh3AG065700 Rh3BG067900 Rh3CG066300 Rh3DG067900
rosa_wichuraiana	Rw3G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	11
AccB1I	GGYRCC	1 cut(s)	1337
AccI	GTMKAC	3 cut(s)	840, 1596, 1635
AccII	CGCG	1 cut(s)	316
AccIII	TCCGGA	1 cut(s)	694
AciI	CCGC	6 cut(s)	201, 280, 314, 965, 1382, 1691
AclI	AACGTT	1 cut(s)	1566
AcoI	YGGCCR	3 cut(s)	311, 804, 1949
AcsI	RAATTY	2 cut(s)	1187, 1219
AcuI	CTGAAG	6 cut(s)	836, 1015, 1128, 1187, 1443, 1851
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	3 cut(s)	1072, 1089, 1174
AflIII	ACRYGT	1 cut(s)	1627
AjnI	CCWGG	7 cut(s)	150, 157, 376, 1518, 1529, 1581, 1771
Alw26I	GTCTC	5 cut(s)	51, 67, 1436, 1613, 1792
Aor13HI	TCCGGA	1 cut(s)	694
AoxI	GGCC	6 cut(s)	311, 804, 1123, 1327, 1806, 1949
ApaI	GGGCCC	1 cut(s)	1331
ApeKI	GCWGC	3 cut(s)	995, 1256, 1959
ApoI	RAATTY	2 cut(s)	1187, 1219
ArsI	GACNNNNNNTTYG	2 cut(s)	558, 590
Asp700I	GAANNNNTTC	3 cut(s)	477, 504, 1028
AspA2I	CCTAGG	1 cut(s)	569
AspLEI	GCGC	1 cut(s)	1485
AspS9I	GGNCC	7 cut(s)	628, 1123, 1327, 1328, 1385, 1430, 1807
AsuC2I	CCSGG	2 cut(s)	1130, 1810
AsuHPI	GGTGA	6 cut(s)	503, 663, 888, 1028, 1490, 1894
AvaII	GGWCC	3 cut(s)	628, 1385, 1430
AvrII	CCTAGG	1 cut(s)	569
BaeGI	GKGCMC	1 cut(s)	1331
BalI	TGGCCA	2 cut(s)	806, 1951
BanI	GGYRCC	1 cut(s)	1337
BanII	GRGCYC	1 cut(s)	1331
BauI	CACGAG	2 cut(s)	735, 1458
BbvI	GCAGC	3 cut(s)	982, 1243, 1946
BccI	CCATC	4 cut(s)	327, 1007, 1411, 1546
BceAI	ACGGC	1 cut(s)	1259
BciT130I	CCWGG	7 cut(s)	152, 159, 378, 1520, 1531, 1583, 1773
BciVI	GTATCC	1 cut(s)	1045
BclI	TGATCA	1 cut(s)	1930
BcnI	CCSGG	2 cut(s)	1130, 1810
BcoDI	GTCTC	5 cut(s)	51, 67, 1436, 1613, 1792
BfaI	CTAG	9 cut(s)	50, 182, 323, 570, 582, 851, 1379, 1665, 1963
BfmI	CTRYAG	1 cut(s)	108
BfuI	GTATCC	1 cut(s)	1045
BglI	GCCNNNNNGGC	1 cut(s)	1335
BglII	AGATCT	1 cut(s)	133
BisI	GCNGC	4 cut(s)	314, 996, 1257, 1960
BlnI	CCTAGG	1 cut(s)	569
BlsI	GCNGC	4 cut(s)	315, 997, 1258, 1961
BmcAI	AGTACT	1 cut(s)	1174
Bme1390I	CCNGG	9 cut(s)	152, 159, 378, 1130, 1520, 1531, 1583, 1773, 1810
Bme18I	GGWCC	3 cut(s)	628, 1385, 1430
BmgT120I	GGNCC	7 cut(s)	628, 1123, 1327, 1328, 1385, 1430, 1807
BmiI	GGNNCC	5 cut(s)	156, 1329, 1339, 1386, 1401
BmrFI	CCNGG	9 cut(s)	152, 159, 378, 1130, 1520, 1531, 1583, 1773, 1810
BmsI	GCATC	4 cut(s)	470, 588, 881, 982
BoxI	GACNNNNGTC	1 cut(s)	846
BpmI	CTGGAG	2 cut(s)	1783, 1959
Bpu10I	CCTNAGC	1 cut(s)	1266
BpuEI	CTTGAG	3 cut(s)	1287, 1363, 1663
BpuMI	CCSGG	2 cut(s)	1130, 1810
BsaAI	YACGTR	1 cut(s)	1544
BsaHI	GRCGYC	1 cut(s)	8
BsaJI	CCNNGG	5 cut(s)	150, 569, 631, 1771, 1772
BsaWI	WCCGGW	3 cut(s)	254, 594, 694
Bse1I	ACTGG	8 cut(s)	621, 674, 846, 934, 1433, 1800, 1942, 1960
Bse3DI	GCAATG	1 cut(s)	553
BseAI	TCCGGA	1 cut(s)	694
BseBI	CCWGG	7 cut(s)	152, 159, 378, 1520, 1531, 1583, 1773
BseDI	CCNNGG	5 cut(s)	150, 569, 631, 1771, 1772
BseGI	GGATG	4 cut(s)	338, 603, 1018, 1526
BseMI	GCAATG	1 cut(s)	553
BseMII	CTCAG	4 cut(s)	333, 653, 878, 1773
BseNI	ACTGG	8 cut(s)	621, 674, 846, 934, 1433, 1800, 1942, 1960
BseRI	GAGGAG	1 cut(s)	1828
BseSI	GKGCMC	1 cut(s)	1331
BseXI	GCAGC	3 cut(s)	982, 1243, 1946
Bsh1236I	CGCG	1 cut(s)	316
Bsh1285I	CGRYCG	1 cut(s)	1691
BshFI	GGCC	6 cut(s)	313, 806, 1125, 1329, 1808, 1951
BshNI	GGYRCC	1 cut(s)	1337
BsiEI	CGRYCG	1 cut(s)	1691
BsiSI	CCGG	5 cut(s)	255, 595, 695, 1130, 1810
BslFI	GGGAC	4 cut(s)	52, 429, 743, 1754
BsmAI	GTCTC	5 cut(s)	51, 67, 1436, 1613, 1792
BsmBI	CGTCTC	1 cut(s)	51
BsmFI	GGGAC	4 cut(s)	52, 429, 743, 1754
BsmI	GAATGC	2 cut(s)	87, 337
BsnI	GGCC	6 cut(s)	313, 806, 1125, 1329, 1808, 1951
Bsp120I	GGGCCC	1 cut(s)	1327
Bsp1286I	GDGCHC	1 cut(s)	1331
Bsp13I	TCCGGA	1 cut(s)	694
Bsp143I	GATC	4 cut(s)	133, 532, 1659, 1930
Bsp19I	CCATGG	1 cut(s)	631
BspACI	CCGC	6 cut(s)	201, 280, 314, 965, 1382, 1691
BspANI	GGCC	6 cut(s)	313, 806, 1125, 1329, 1808, 1951
BspCNI	CTCAG	4 cut(s)	334, 654, 879, 1772
BspEI	TCCGGA	1 cut(s)	694
BspFNI	CGCG	1 cut(s)	316
BspLI	GGNNCC	5 cut(s)	156, 1329, 1339, 1386, 1401
BspT107I	GGYRCC	1 cut(s)	1337
BsrDI	GCAATG	1 cut(s)	553
BsrI	ACTGG	8 cut(s)	621, 674, 846, 934, 1433, 1800, 1942, 1960
BssECI	CCNNGG	5 cut(s)	150, 569, 631, 1771, 1772
BssMI	GATC	4 cut(s)	133, 532, 1659, 1930
BssNI	GRCGYC	1 cut(s)	8
BssSI	CACGAG	2 cut(s)	735, 1458
BssT1I	CCWWGG	2 cut(s)	569, 631
Bst2BI	CACGAG	2 cut(s)	735, 1458
Bst2UI	CCWGG	7 cut(s)	152, 159, 378, 1520, 1531, 1583, 1773
Bst4CI	ACNGT	6 cut(s)	610, 791, 904, 1559, 1601, 1849
Bst6I	CTCTTC	1 cut(s)	1163
BstACI	GRCGYC	1 cut(s)	8
BstBAI	YACGTR	1 cut(s)	1544
BstC8I	GCNNGC	3 cut(s)	205, 980, 1364
BstDEI	CTNAG	6 cut(s)	342, 662, 887, 921, 1266, 1759
BstDSI	CCRYGG	1 cut(s)	631
BstF5I	GGATG	4 cut(s)	338, 603, 1018, 1526
BstFNI	CGCG	1 cut(s)	316
BstHHI	GCGC	1 cut(s)	1485
BstKTI	GATC	4 cut(s)	136, 535, 1662, 1933
BstMAI	GTCTC	5 cut(s)	51, 67, 1436, 1613, 1792
BstMBI	GATC	4 cut(s)	133, 532, 1659, 1930
BstMCI	CGRYCG	1 cut(s)	1691
BstMWI	GCNNNNNNNGC	9 cut(s)	209, 319, 343, 817, 1262, 1335, 1418, 1489, 1712
BstNI	CCWGG	7 cut(s)	152, 159, 378, 1520, 1531, 1583, 1773
BstNSI	RCATGY	3 cut(s)	1150, 1489, 1631
BstPAI	GACNNNNGTC	1 cut(s)	846
BstSCI	CCNGG	9 cut(s)	150, 157, 376, 1128, 1518, 1529, 1581, 1771, 1808
BstSFI	CTRYAG	1 cut(s)	108
BstSLI	GKGCMC	1 cut(s)	1331
BstUI	CGCG	1 cut(s)	316
BstV1I	GCAGC	3 cut(s)	982, 1243, 1946
BstX2I	RGATCY	1 cut(s)	133
BstYI	RGATCY	1 cut(s)	133
BsuI	GTATCC	1 cut(s)	1045
BsuRI	GGCC	6 cut(s)	313, 806, 1125, 1329, 1808, 1951
BtgI	CCRYGG	1 cut(s)	631
BtsCI	GGATG	4 cut(s)	338, 603, 1018, 1526
BtsIMutI	CAGTG	4 cut(s)	238, 606, 1039, 1564
Cac8I	GCNNGC	3 cut(s)	205, 980, 1364
CfoI	GCGC	1 cut(s)	1485
Cfr13I	GGNCC	7 cut(s)	628, 1123, 1327, 1328, 1385, 1430, 1807
Csp6I	GTAC	3 cut(s)	1071, 1088, 1173
CviAII	CATG	9 cut(s)	632, 758, 1147, 1334, 1486, 1493, 1628, 1657, 1838
CviQI	GTAC	3 cut(s)	1071, 1088, 1173
DdeI	CTNAG	6 cut(s)	342, 662, 887, 921, 1266, 1759
DpnI	GATC	4 cut(s)	135, 534, 1661, 1932
DpnII	GATC	4 cut(s)	133, 532, 1659, 1930
DraI	TTTAAA	1 cut(s)	1741
EaeI	YGGCCR	3 cut(s)	311, 804, 1949
Eam1104I	CTCTTC	1 cut(s)	1163
EarI	CTCTTC	1 cut(s)	1163
Eco130I	CCWWGG	2 cut(s)	569, 631
Eco24I	GRGCYC	1 cut(s)	1331
Eco32I	GATATC	1 cut(s)	292
Eco47I	GGWCC	3 cut(s)	628, 1385, 1430
Eco57I	CTGAAG	6 cut(s)	836, 1015, 1128, 1187, 1443, 1851
EcoO109I	RGGNCCY	2 cut(s)	1328, 1385
EcoRII	CCWGG	7 cut(s)	150, 157, 376, 1518, 1529, 1581, 1771
EcoRV	GATATC	1 cut(s)	292
EcoT14I	CCWWGG	2 cut(s)	569, 631
EcoT38I	GRGCYC	1 cut(s)	1331
ErhI	CCWWGG	2 cut(s)	569, 631
Esp3I	CGTCTC	1 cut(s)	51
FaeI	CATG	9 cut(s)	635, 761, 1150, 1337, 1489, 1496, 1631, 1660, 1841
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FaqI	GGGAC	4 cut(s)	52, 429, 743, 1754
FatI	CATG	9 cut(s)	631, 757, 1146, 1333, 1485, 1492, 1627, 1656, 1837
FauI	CCCGC	2 cut(s)	208, 1375
FbaI	TGATCA	1 cut(s)	1930
FblI	GTMKAC	3 cut(s)	840, 1596, 1635
Fnu4HI	GCNGC	4 cut(s)	314, 996, 1257, 1960
FokI	GGATG	4 cut(s)	345, 610, 1025, 1513
FriOI	GRGCYC	1 cut(s)	1331
Fsp4HI	GCNGC	4 cut(s)	314, 996, 1257, 1960
FspBI	CTAG	9 cut(s)	50, 182, 323, 570, 582, 851, 1379, 1665, 1963
GlaI	GCGC	1 cut(s)	1484
GluI	GCNGC	4 cut(s)	314, 996, 1257, 1960
GsuI	CTGGAG	2 cut(s)	1783, 1959
HaeIII	GGCC	6 cut(s)	313, 806, 1125, 1329, 1808, 1951
HapII	CCGG	5 cut(s)	255, 595, 695, 1130, 1810
HhaI	GCGC	1 cut(s)	1485
Hin1I	GRCGYC	1 cut(s)	8
Hin1II	CATG	9 cut(s)	635, 761, 1150, 1337, 1489, 1496, 1631, 1660, 1841
Hin6I	GCGC	1 cut(s)	1483
HinP1I	GCGC	1 cut(s)	1483
HincII	GTYRAC	6 cut(s)	6, 616, 841, 927, 1291, 1579
HindII	GTYRAC	6 cut(s)	6, 616, 841, 927, 1291, 1579
HindIII	AAGCTT	1 cut(s)	1890
HpaII	CCGG	5 cut(s)	255, 595, 695, 1130, 1810
HphI	GGTGA	6 cut(s)	503, 663, 888, 1028, 1490, 1894
HpyAV	CCTTC	2 cut(s)	719, 1418
HpyCH4III	ACNGT	6 cut(s)	610, 791, 904, 1559, 1601, 1849
HpyCH4IV	ACGT	4 cut(s)	8, 44, 1543, 1566
HpyCH4V	TGCA	4 cut(s)	32, 601, 781, 1721
HpyF10VI	GCNNNNNNNGC	9 cut(s)	209, 319, 343, 817, 1262, 1335, 1418, 1489, 1712
HpyF3I	CTNAG	6 cut(s)	342, 662, 887, 921, 1266, 1759
HpySE526I	ACGT	4 cut(s)	8, 44, 1543, 1566
Hsp92I	GRCGYC	1 cut(s)	8
Hsp92II	CATG	9 cut(s)	635, 761, 1150, 1337, 1489, 1496, 1631, 1660, 1841
HspAI	GCGC	1 cut(s)	1483
Kpn2I	TCCGGA	1 cut(s)	694
Ksp22I	TGATCA	1 cut(s)	1930
Kzo9I	GATC	4 cut(s)	133, 532, 1659, 1930
LmnI	GCTCC	1 cut(s)	1399
Lsp1109I	GCAGC	3 cut(s)	982, 1243, 1946
LweI	GCATC	4 cut(s)	470, 588, 881, 982
MaeI	CTAG	9 cut(s)	50, 182, 323, 570, 582, 851, 1379, 1665, 1963
MaeII	ACGT	4 cut(s)	8, 44, 1543, 1566
MaeIII	GTNAC	4 cut(s)	17, 877, 1034, 1825
MalI	GATC	4 cut(s)	135, 534, 1661, 1932
MboI	GATC	4 cut(s)	133, 532, 1659, 1930
MfeI	CAATTG	2 cut(s)	706, 1407
MflI	RGATCY	1 cut(s)	133
MhlI	GDGCHC	1 cut(s)	1331
MlsI	TGGCCA	2 cut(s)	806, 1951
MluNI	TGGCCA	2 cut(s)	806, 1951
MlyI	GAGTC	4 cut(s)	725, 1322, 1794, 1827
MmeI	TCCRAC	1 cut(s)	1175
Mox20I	TGGCCA	2 cut(s)	806, 1951
MroI	TCCGGA	1 cut(s)	694
MroXI	GAANNNNTTC	3 cut(s)	477, 504, 1028
MscI	TGGCCA	2 cut(s)	806, 1951
MseI	TTAA	5 cut(s)	71, 243, 749, 1616, 1740
MslI	CAYNNNNRTG	1 cut(s)	762
Msp20I	TGGCCA	2 cut(s)	806, 1951
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	5 cut(s)	255, 595, 695, 1130, 1810
MspR9I	CCNGG	9 cut(s)	152, 159, 378, 1130, 1520, 1531, 1583, 1773, 1810
MunI	CAATTG	2 cut(s)	706, 1407
Mva1269I	GAATGC	2 cut(s)	87, 337
MvaI	CCWGG	7 cut(s)	152, 159, 378, 1520, 1531, 1583, 1773
MvnI	CGCG	1 cut(s)	316
MwoI	GCNNNNNNNGC	9 cut(s)	209, 319, 343, 817, 1262, 1335, 1418, 1489, 1712
NciI	CCSGG	2 cut(s)	1130, 1810
NcoI	CCATGG	1 cut(s)	631
NdeII	GATC	4 cut(s)	133, 532, 1659, 1930
NlaIII	CATG	9 cut(s)	635, 761, 1150, 1337, 1489, 1496, 1631, 1660, 1841
NlaIV	GGNNCC	5 cut(s)	156, 1329, 1339, 1386, 1401
NmuCI	GTSAC	1 cut(s)	1034
NspI	RCATGY	3 cut(s)	1150, 1489, 1631
PasI	CCCWGGG	1 cut(s)	1772
PciI	ACATGT	1 cut(s)	1627
PctI	GAATGC	2 cut(s)	87, 337
PdmI	GAANNNNTTC	3 cut(s)	477, 504, 1028
PfeI	GAWTC	6 cut(s)	114, 431, 1103, 1507, 1523, 1547
PflFI	GACNNNGTC	1 cut(s)	43
PkrI	GCNGC	4 cut(s)	315, 997, 1258, 1961
PleI	GAGTC	4 cut(s)	725, 1321, 1793, 1826
PpsI	GAGTC	4 cut(s)	725, 1321, 1793, 1826
Ppu21I	YACGTR	1 cut(s)	1544
PpuMI	RGGWCCY	1 cut(s)	1385
PscI	ACATGT	1 cut(s)	1627
PshAI	GACNNNNGTC	1 cut(s)	846
Psp1406I	AACGTT	1 cut(s)	1566
Psp5II	RGGWCCY	1 cut(s)	1385
Psp6I	CCWGG	7 cut(s)	150, 157, 376, 1518, 1529, 1581, 1771
PspGI	CCWGG	7 cut(s)	150, 157, 376, 1518, 1529, 1581, 1771
PspN4I	GGNNCC	5 cut(s)	156, 1329, 1339, 1386, 1401
PspOMI	GGGCCC	1 cut(s)	1327
PspPI	GGNCC	7 cut(s)	628, 1123, 1327, 1328, 1385, 1430, 1807
PspPPI	RGGWCCY	1 cut(s)	1385
PsuI	RGATCY	1 cut(s)	133
PsyI	GACNNNGTC	1 cut(s)	43
RsaI	GTAC	3 cut(s)	1072, 1089, 1174
RsaNI	GTAC	3 cut(s)	1071, 1088, 1173
RseI	CAYNNNNRTG	1 cut(s)	762
SalI	GTCGAC	1 cut(s)	839
SaqAI	TTAA	5 cut(s)	71, 243, 749, 1616, 1740
SatI	GCNGC	4 cut(s)	314, 996, 1257, 1960
Sau3AI	GATC	4 cut(s)	133, 532, 1659, 1930
Sau96I	GGNCC	7 cut(s)	628, 1123, 1327, 1328, 1385, 1430, 1807
ScaI	AGTACT	1 cut(s)	1174
SchI	GAGTC	4 cut(s)	725, 1322, 1794, 1827
ScrFI	CCNGG	9 cut(s)	152, 159, 378, 1130, 1520, 1531, 1583, 1773, 1810
SduI	GDGCHC	1 cut(s)	1331
SfaNI	GCATC	4 cut(s)	470, 588, 881, 982
SfcI	CTRYAG	1 cut(s)	108
SinI	GGWCC	3 cut(s)	628, 1385, 1430
SmiMI	CAYNNNNRTG	1 cut(s)	762
SmlI	CTYRAG	3 cut(s)	1302, 1342, 1642
SmoI	CTYRAG	3 cut(s)	1302, 1342, 1642
SsiI	CCGC	6 cut(s)	201, 280, 314, 965, 1382, 1691
SspI	AATATT	1 cut(s)	248
SspMI	CTAG	9 cut(s)	50, 182, 323, 570, 582, 851, 1379, 1665, 1963
StyD4I	CCNGG	9 cut(s)	150, 157, 376, 1128, 1518, 1529, 1581, 1771, 1808
StyI	CCWWGG	2 cut(s)	569, 631
TaaI	ACNGT	6 cut(s)	610, 791, 904, 1559, 1601, 1849
TaiI	ACGT	4 cut(s)	11, 47, 1546, 1569
TaqI	TCGA	2 cut(s)	840, 1550
TatI	WGTACW	1 cut(s)	1172
TauI	GCSGC	1 cut(s)	316
TfiI	GAWTC	6 cut(s)	114, 431, 1103, 1507, 1523, 1547
Tru1I	TTAA	5 cut(s)	71, 243, 749, 1616, 1740
Tru9I	TTAA	5 cut(s)	71, 243, 749, 1616, 1740
TscAI	CASTG	4 cut(s)	238, 613, 1039, 1564
TseFI	GTSAC	1 cut(s)	1034
TseI	GCWGC	3 cut(s)	995, 1256, 1959
Tsp45I	GTSAC	1 cut(s)	1034
TspDTI	ATGAA	5 cut(s)	738, 768, 845, 996, 1902
TspGWI	ACGGA	1 cut(s)	1593
TspRI	CASTG	4 cut(s)	238, 613, 1039, 1564
Tth111I	GACNNNGTC	1 cut(s)	43
VpaK11BI	GGWCC	3 cut(s)	628, 1385, 1430
XapI	RAATTY	2 cut(s)	1187, 1219
XbaI	TCTAGA	1 cut(s)	49
XceI	RCATGY	3 cut(s)	1150, 1489, 1631
XmaJI	CCTAGG	1 cut(s)	569
XmiI	GTMKAC	3 cut(s)	840, 1596, 1635
XmnI	GAANNNNTTC	3 cut(s)	477, 504, 1028
XspI	CTAG	9 cut(s)	50, 182, 323, 570, 582, 851, 1379, 1665, 1963
ZraI	GACGTC	1 cut(s)	9
ZrmI	AGTACT	1 cut(s)	1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.