Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0007747

Physical Location & Seq

Genomic Coordinates Reverse (-)

30190640 .. 30195682

Gene Structure 5043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1220900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGCTTCTTGGGCTCTTTTACCGGCAGCTCCAGTAACTGGTCGCTGTCTGGTGATTCCTGCCAGGACAAAGAGGTCCTCCTCCTTCTGGGTTCGCTCTTCTTTGGACACTAATGTTTCTGACATGAGGGTAAACGCTCCAAAAGGGTTGTTTCCACCTGAACCAGAGTTCTACCGCGGTCCGAAGCTGAAAGTGGCCATTATCGGAGCTGGACTCGCGGGCATGTCAACCGCCGTTGAGCTTTTGGATCAAGGCCATGAGGTGGATATTTATGAATCGAGGCCTTTCATTGGCGGAAAAGTGGGCTCTTTTGTTGATAAAAAAGGAAACCACATTGAAATGGGACTCCATGTTTTCTTTGGTTGCTACAGTAATCTTTTCCGATTAATGAAAAAGGTGGGTGCAGACGAAAATCTTCTTGTCAAGGATCATACTCACACTTTTGTAAACAAAGGGGGTAACATTGGTGAACTTGATTTTCGGTTCCCAATTGGAGCACCAATACATGGGATTCTTGCATTTTTGTCTACAAATCAGATTAAGACTTACGATAAAGCAAGAAATGCAGTGGCTCTTGCCTTAAGTCCGGTTGTAAAGGCTCTTGTTAATCCAGATGGAGCATTGCAGGACGTACGGAATTTGGATAGTATAAGCTTCTCTGATTGGTTCTTGTCCAAAGGTGGCACGCGAATGAGCATCCAGCGGATGTGGGATCCTGTTGCATATGCACTTGGGTTTATTGACTGTGATAATATTAGCGCTCGTTGTATGCTCACTATATTCACATTGTTTGCCACTAAGACCGAGGCTTCCCTTCTACGCATGCTCAAGGGTTCGCCAGATGTTTACTTAAGTGGCCCCATCAGAGATTATATCATTGCCAAGGGGGGCAGGTTTCATCTCAGGTGGGGATGTAGAGAAATACTATATGATAAATCTTCTGATGGCGAAACATATGTTACTGGATTTTCGATGTCTAGGGCTACTAACAAGAAAATTGTGACAGCCGACGCTTATGTTGCAGCATGTGATGTGCCTGGAATCAAGAGACTGCTTCCTTCTCAGTGGAGGGAATGGGATTTTTTCAATAATGTTTATGAGCTAGTTGGAGTCCCTGTTGTCACTGTGCAACTTAGATACGACGGTTGGGTCACAGAGTTACAAGATCTAGAACGGTCAAGGCAATTGAAGCAAGCTTCGGGATTAGATAATCTCCTATATACTCCTGATGCAGATTTCTCTTGCTTTGCCGACCTAGCGCTTACTTCTCCTGAAGATTACTACATCGAGGGACAAGGTTCACTCCTCCAATGCGTTTTGACACCAGGTGATCCTTACATGCCTTTACCAAACGAAGAAATTATAGCAAGAGTGACGAAACAGGTTTTGGCTTTATTCCCATCATCCCAAGGTTTAGAAGTCACTTGGTCATCAGTTGTCAAAATTGGGCAATCTCTCTATCGGGAGGGACCTGGCAAAGATCCGTTTAGACCTGATCAGAAGACACCTGTGAAGAATTTTTTCCTCGCTGGCTCATACACAAAACAGGACTATATCGACAGCATGGAAGGAGCAACTTTGTCTGGCAGGCAAGCCTCTGCATATATATGTGATGCCGGGGAAGAGTTGGTGGGATTGAGAAAGAAGCTTGCAGCCCAAGATTCTGGGGAATACACAAAAGCTGTTAATACTACTGATGAGCTGAGTCTTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009509 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016119 GO:0016120 GO:0016491 GO:0016627 GO:0016635 GO:0031967 GO:0031975 GO:0042214 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046246 GO:0052886 GO:0052889 GO:0055114 GO:0071704 GO:1901175 GO:1901177 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

572

Amino Acids

63.06

Weight (kDa)

6.43

Isoelectric Point (pI)

42.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAO	PF01266	64 - 99	6.3e-06	FAD dependent oxidoreductase
NAD_binding_8	PF13450	67 - 132	6.8e-14	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	72 - 536	1.2e-73	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04870 AT3G04870 AT3G04870 AT3G04870
fragaria_vesca	FvH4_6g03420 FvH4_6g03420
malus_domestica	MD04G1220900.v1.1 MD12G1237300.v1.1
prunus_persica	Prupe.6G340000_v2.0.a1 Prupe.6G340000_v2.0.a1
pyrus_communis	pycom04g19540 pycom12g21820
rosa_chinensis	RchiOBHm_Chr3g0451921
rosa_laevigata	RLG00000025638
rosa_multiflora	Rmu_sc0002901.1_g000003
rosa_roxburghii	Rroxscaffold_164G00436190 Rroxscaffold_6G00429090
rosa_rugosa	Rorug02G0637300 Rorug02G0637400
rosa_samantha	Rh3AG039100 Rh3BG040400 Rh3CG038900 Rh3DG039600
rosa_wichuraiana	Rw3G002920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	73, 1148
Acc36I	ACCTGC	1 cut(s)	882
AccB7I	CCANNNNNTGG	3 cut(s)	38, 262, 506
AccI	GTMKAC	1 cut(s)	527
AccII	CGCG	3 cut(s)	177, 218, 688
AciI	CCGC	6 cut(s)	175, 177, 218, 231, 294, 703
AclWI	GGATC	6 cut(s)	255, 435, 707, 720, 1325, 1475
AcoI	YGGCCR	1 cut(s)	195
AcsI	RAATTY	2 cut(s)	637, 1516
AcuI	CTGAAG	1 cut(s)	1293
AdeI	CACNNNGTG	1 cut(s)	1328
AfaI	GTAC	1 cut(s)	633
AfeI	AGCGCT	2 cut(s)	760, 1260
AfiI	CCNNNNNNNGG	5 cut(s)	38, 87, 262, 290, 506
AflII	CTTAAG	2 cut(s)	580, 850
AgsI	TTSAA	3 cut(s)	338, 1087, 1189
AjnI	CCWGG	4 cut(s)	62, 1036, 1324, 1471
AjuI	GAANNNNNNNTTGG	2 cut(s)	1370, 1402
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	1 cut(s)	1042
AlwI	GGATC	6 cut(s)	255, 435, 707, 720, 1325, 1475
AlwNI	CAGNNNCTG	1 cut(s)	38
Aor51HI	AGCGCT	2 cut(s)	760, 1260
AoxI	GGCC	4 cut(s)	195, 253, 281, 856
ApeKI	GCWGC	3 cut(s)	26, 1022, 1652
ApoI	RAATTY	2 cut(s)	637, 1516
AseI	ATTAAT	1 cut(s)	386
Asp700I	GAANNNNTTC	2 cut(s)	414, 1520
AspLEI	GCGC	2 cut(s)	761, 1261
AspS9I	GGNCC	4 cut(s)	75, 179, 857, 1469
AsuC2I	CCSGG	1 cut(s)	1618
AsuHPI	GGTGA	3 cut(s)	64, 479, 1340
AvaII	GGWCC	3 cut(s)	75, 179, 1469
BaeI	ACNNNNGTAYC	2 cut(s)	1129, 1162
BalI	TGGCCA	1 cut(s)	197
BamHI	GGATCC	1 cut(s)	712
BanII	GRGCYC	2 cut(s)	16, 308
BbsI	GAAGAC	1 cut(s)	1508
Bbv12I	GWGCWC	1 cut(s)	499
BbvI	GCAGC	3 cut(s)	38, 1034, 1664
BccI	CCATC	4 cut(s)	608, 869, 938, 1408
BceAI	ACGGC	1 cut(s)	218
BciT130I	CCWGG	4 cut(s)	64, 1038, 1326, 1473
BclI	TGATCA	1 cut(s)	1495
BcnI	CCSGG	1 cut(s)	1618
BcoDI	GTCTC	1 cut(s)	1042
BfaI	CTAG	4 cut(s)	978, 1103, 1169, 1256
BfmI	CTRYAG	1 cut(s)	367
BfoI	RGCGCY	2 cut(s)	762, 1262
BfrI	CTTAAG	2 cut(s)	580, 850
BfuAI	ACCTGC	1 cut(s)	882
BglII	AGATCT	1 cut(s)	1165
BisI	GCNGC	3 cut(s)	27, 1023, 1653
BlsI	GCNGC	3 cut(s)	28, 1024, 1654
Bme1390I	CCNGG	5 cut(s)	64, 1038, 1326, 1473, 1618
Bme18I	GGWCC	3 cut(s)	75, 179, 1469
BmgT120I	GGNCC	4 cut(s)	75, 179, 857, 1469
BmiI	GGNNCC	4 cut(s)	485, 714, 859, 1470
BmrFI	CCNGG	5 cut(s)	64, 1038, 1326, 1473, 1618
BmsI	GCATC	3 cut(s)	705, 1219, 1603
BpiI	GAAGAC	1 cut(s)	1508
BplI	GAGNNNNNCTC	2 cut(s)	198, 230
BpmI	CTGGAG	1 cut(s)	15
BpuEI	CTTGAG	1 cut(s)	812
BpuMI	CCSGG	1 cut(s)	1618
BsaJI	CCNNGG	5 cut(s)	175, 804, 882, 1408, 1617
BsaWI	WCCGGW	1 cut(s)	586
BsaXI	ACNNNNNCTCC	2 cut(s)	1101, 1131
Bsc4I	CCNNNNNNNGG	5 cut(s)	38, 87, 262, 290, 506
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	3 cut(s)	32, 43, 967
Bse3DI	GCAATG	2 cut(s)	620, 876
BseBI	CCWGG	4 cut(s)	64, 1038, 1326, 1473
BseDI	CCNNGG	5 cut(s)	175, 804, 882, 1408, 1617
BseGI	GGATG	4 cut(s)	696, 711, 917, 1403
BseLI	CCNNNNNNNGG	5 cut(s)	38, 87, 262, 290, 506
BseMI	GCAATG	2 cut(s)	620, 876
BseMII	CTCAG	3 cut(s)	916, 1076, 1694
BseNI	ACTGG	3 cut(s)	32, 43, 967
BseRI	GAGGAG	2 cut(s)	70, 1295
BseXI	GCAGC	3 cut(s)	38, 1034, 1664
BsgI	GTGCAG	1 cut(s)	423
Bsh1236I	CGCG	3 cut(s)	177, 218, 688
BshFI	GGCC	4 cut(s)	197, 255, 283, 858
BsiHKAI	GWGCWC	1 cut(s)	499
BsiSI	CCGG	3 cut(s)	23, 587, 1617
BsiWI	CGTACG	1 cut(s)	631
BslFI	GGGAC	4 cut(s)	357, 1097, 1305, 1482
BslI	CCNNNNNNNGG	5 cut(s)	38, 87, 262, 290, 506
BsmAI	GTCTC	1 cut(s)	1042
BsmFI	GGGAC	4 cut(s)	357, 1097, 1305, 1482
BsnI	GGCC	4 cut(s)	197, 255, 283, 858
Bsp1286I	GDGCHC	3 cut(s)	16, 308, 499
Bsp143I	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
BspACI	CCGC	6 cut(s)	175, 177, 218, 231, 294, 703
BspANI	GGCC	4 cut(s)	197, 255, 283, 858
BspCNI	CTCAG	3 cut(s)	915, 1075, 1695
BspFNI	CGCG	3 cut(s)	177, 218, 688
BspLI	GGNNCC	4 cut(s)	485, 714, 859, 1470
BspMI	ACCTGC	1 cut(s)	882
BspPI	GGATC	6 cut(s)	255, 435, 707, 720, 1325, 1475
BspQI	GCTCTTC	1 cut(s)	103
BspTI	CTTAAG	2 cut(s)	580, 850
BsrDI	GCAATG	2 cut(s)	620, 876
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	3 cut(s)	32, 43, 967
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	5 cut(s)	175, 804, 882, 1408, 1617
BssMI	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
BssT1I	CCWWGG	2 cut(s)	882, 1408
Bst2UI	CCWGG	4 cut(s)	64, 1038, 1326, 1473
Bst4CI	ACNGT	5 cut(s)	371, 746, 1126, 1145, 1176
Bst6I	CTCTTC	2 cut(s)	103, 1617
BstAFI	CTTAAG	2 cut(s)	580, 850
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstC8I	GCNNGC	8 cut(s)	220, 686, 824, 1194, 1531, 1589, 1593, 1650
BstDEI	CTNAG	5 cut(s)	798, 902, 1062, 1133, 1703
BstDSI	CCRYGG	1 cut(s)	175
BstF5I	GGATG	4 cut(s)	696, 711, 917, 1403
BstFNI	CGCG	3 cut(s)	177, 218, 688
BstH2I	RGCGCY	2 cut(s)	762, 1262
BstHHI	GCGC	2 cut(s)	761, 1261
BstKTI	GATC	7 cut(s)	250, 430, 715, 1168, 1333, 1483, 1498
BstMAI	GTCTC	1 cut(s)	1042
BstMBI	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 215, 563, 1019, 1189, 1256
BstNI	CCWGG	4 cut(s)	64, 1038, 1326, 1473
BstNSI	RCATGY	4 cut(s)	226, 826, 1029, 1342
BstSCI	CCNGG	5 cut(s)	62, 1036, 1324, 1471, 1616
BstSFI	CTRYAG	1 cut(s)	367
BstUI	CGCG	3 cut(s)	177, 218, 688
BstV1I	GCAGC	3 cut(s)	38, 1034, 1664
BstV2I	GAAGAC	1 cut(s)	1508
BstX2I	RGATCY	3 cut(s)	712, 1165, 1480
BstXI	CCANNNNNNTGG	1 cut(s)	1664
BstYI	RGATCY	3 cut(s)	712, 1165, 1480
BsuRI	GGCC	4 cut(s)	197, 255, 283, 858
BtgI	CCRYGG	1 cut(s)	175
BtsCI	GGATG	4 cut(s)	696, 711, 917, 1403
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	3 cut(s)	573, 1070, 1122
BveI	ACCTGC	1 cut(s)	882
Cac8I	GCNNGC	8 cut(s)	220, 686, 824, 1194, 1531, 1589, 1593, 1650
CaiI	CAGNNNCTG	1 cut(s)	38
CfoI	GCGC	2 cut(s)	761, 1261
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	4 cut(s)	75, 179, 857, 1469
Cfr42I	CCGCGG	1 cut(s)	178
CpoI	CGGWCCG	1 cut(s)	179
CseI	GACGC	1 cut(s)	1019
CsiI	ACCWGGT	1 cut(s)	1324
Csp6I	GTAC	1 cut(s)	632
CspI	CGGWCCG	1 cut(s)	179
CviAII	CATG	9 cut(s)	124, 223, 257, 350, 506, 823, 1026, 1339, 1564
CviQI	GTAC	1 cut(s)	632
DdeI	CTNAG	5 cut(s)	798, 902, 1062, 1133, 1703
DpnI	GATC	7 cut(s)	249, 429, 714, 1167, 1332, 1482, 1497
DpnII	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
DraIII	CACNNNGTG	1 cut(s)	1328
DrdI	GACNNNNNNGTC	2 cut(s)	73, 1148
DseDI	GACNNNNNNGTC	2 cut(s)	73, 1148
EaeI	YGGCCR	1 cut(s)	195
Eam1104I	CTCTTC	2 cut(s)	103, 1617
EarI	CTCTTC	2 cut(s)	103, 1617
EciI	GGCGGA	1 cut(s)	309
Eco130I	CCWWGG	2 cut(s)	882, 1408
Eco147I	AGGCCT	1 cut(s)	283
Eco24I	GRGCYC	2 cut(s)	16, 308
Eco47I	GGWCC	3 cut(s)	75, 179, 1469
Eco47III	AGCGCT	2 cut(s)	760, 1260
Eco57I	CTGAAG	1 cut(s)	1293
EcoO109I	RGGNCCY	2 cut(s)	75, 1469
EcoRII	CCWGG	4 cut(s)	62, 1036, 1324, 1471
EcoT14I	CCWWGG	2 cut(s)	882, 1408
EcoT38I	GRGCYC	2 cut(s)	16, 308
ErhI	CCWWGG	2 cut(s)	882, 1408
FaeI	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1342, 1567
FaqI	GGGAC	4 cut(s)	357, 1097, 1305, 1482
FatI	CATG	9 cut(s)	123, 222, 256, 349, 505, 822, 1025, 1338, 1563
FauI	CCCGC	1 cut(s)	211
FauNDI	CATATG	2 cut(s)	724, 955
FbaI	TGATCA	1 cut(s)	1495
FblI	GTMKAC	1 cut(s)	527
Fnu4HI	GCNGC	3 cut(s)	27, 1023, 1653
FokI	GGATG	4 cut(s)	683, 718, 924, 1390
FriOI	GRGCYC	2 cut(s)	16, 308
Fsp4HI	GCNGC	3 cut(s)	27, 1023, 1653
FspBI	CTAG	4 cut(s)	978, 1103, 1169, 1256
GlaI	GCGC	2 cut(s)	760, 1260
GluI	GCNGC	3 cut(s)	27, 1023, 1653
GsuI	CTGGAG	1 cut(s)	15
HaeII	RGCGCY	2 cut(s)	762, 1262
HaeIII	GGCC	4 cut(s)	197, 255, 283, 858
HapII	CCGG	3 cut(s)	23, 587, 1617
HgaI	GACGC	1 cut(s)	1019
HhaI	GCGC	2 cut(s)	761, 1261
Hin1II	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1342, 1567
Hin6I	GCGC	2 cut(s)	759, 1259
HinP1I	GCGC	2 cut(s)	759, 1259
HincII	GTYRAC	1 cut(s)	228
HindII	GTYRAC	1 cut(s)	228
HindIII	AAGCTT	3 cut(s)	652, 1194, 1646
HinfI	GANTC	9 cut(s)	55, 213, 275, 345, 511, 1041, 1110, 1661, 1705
HpaII	CCGG	3 cut(s)	23, 587, 1617
HphI	GGTGA	3 cut(s)	64, 479, 1340
Hpy166II	GTNNAC	7 cut(s)	133, 228, 448, 470, 528, 847, 1301
Hpy188I	TCNGA	9 cut(s)	121, 183, 206, 383, 537, 661, 866, 943, 1500
Hpy188III	TCNNGA	7 cut(s)	611, 1045, 1169, 1200, 1226, 1271, 1463
Hpy8I	GTNNAC	7 cut(s)	133, 228, 448, 470, 528, 847, 1301
Hpy99I	CGWCG	2 cut(s)	1013, 1145
HpyAV	CCTTC	4 cut(s)	94, 824, 1068, 1562
HpyCH4III	ACNGT	5 cut(s)	371, 746, 1126, 1145, 1176
HpyCH4IV	ACGT	1 cut(s)	630
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 215, 563, 1019, 1189, 1256
HpyF3I	CTNAG	5 cut(s)	798, 902, 1062, 1133, 1703
HpySE526I	ACGT	1 cut(s)	630
Hsp92II	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1342, 1567
HspAI	GCGC	2 cut(s)	759, 1259
Ksp22I	TGATCA	1 cut(s)	1495
KspI	CCGCGG	1 cut(s)	178
Kzo9I	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
LguI	GCTCTTC	1 cut(s)	103
LmnI	GCTCC	6 cut(s)	34, 142, 206, 494, 617, 1571
Lsp1109I	GCAGC	3 cut(s)	38, 1034, 1664
LweI	GCATC	3 cut(s)	705, 1219, 1603
MabI	ACCWGGT	1 cut(s)	1324
MaeI	CTAG	4 cut(s)	978, 1103, 1169, 1256
MaeII	ACGT	1 cut(s)	630
MaeIII	GTNAC	9 cut(s)	34, 458, 958, 1000, 1120, 1150, 1158, 1372, 1420
MalI	GATC	7 cut(s)	249, 429, 714, 1167, 1332, 1482, 1497
MboI	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
MboII	GAAGA	8 cut(s)	90, 407, 930, 1286, 1367, 1513, 1525, 1634
MfeI	CAATTG	2 cut(s)	489, 1184
MflI	RGATCY	3 cut(s)	712, 1165, 1480
MhlI	GDGCHC	3 cut(s)	16, 308, 499
MlsI	TGGCCA	1 cut(s)	197
MluCI	AATT	7 cut(s)	489, 637, 996, 1184, 1359, 1443, 1516
MluNI	TGGCCA	1 cut(s)	197
MlyI	GAGTC	4 cut(s)	207, 339, 1119, 1714
MmeI	TCCRAC	1 cut(s)	1087
Mox20I	TGGCCA	1 cut(s)	197
MroXI	GAANNNNTTC	2 cut(s)	414, 1520
MscI	TGGCCA	1 cut(s)	197
MseI	TTAA	6 cut(s)	386, 540, 581, 606, 851, 1686
MslI	CAYNNNNRTG	3 cut(s)	338, 689, 1606
Msp20I	TGGCCA	1 cut(s)	197
MspA1I	CMGCKG	2 cut(s)	177, 703
MspCI	CTTAAG	2 cut(s)	580, 850
MspI	CCGG	3 cut(s)	23, 587, 1617
MspR9I	CCNGG	5 cut(s)	64, 1038, 1326, 1473, 1618
MunI	CAATTG	2 cut(s)	489, 1184
MvaI	CCWGG	4 cut(s)	64, 1038, 1326, 1473
MvnI	CGCG	3 cut(s)	177, 218, 688
MwoI	GCNNNNNNNGC	6 cut(s)	11, 215, 563, 1019, 1189, 1256
NciI	CCSGG	1 cut(s)	1618
NdeI	CATATG	2 cut(s)	724, 955
NdeII	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
NlaIII	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1342, 1567
NlaIV	GGNNCC	4 cut(s)	485, 714, 859, 1470
NmuCI	GTSAC	5 cut(s)	1000, 1120, 1150, 1372, 1420
NspI	RCATGY	4 cut(s)	226, 826, 1029, 1342
PaeI	GCATGC	1 cut(s)	826
PceI	AGGCCT	1 cut(s)	283
PciSI	GCTCTTC	1 cut(s)	103
PdmI	GAANNNNTTC	2 cut(s)	414, 1520
PfeI	GAWTC	5 cut(s)	55, 275, 511, 1041, 1661
Pfl23II	CGTACG	1 cut(s)	631
PflMI	CCANNNNNTGG	3 cut(s)	38, 262, 506
PkrI	GCNGC	3 cut(s)	28, 1024, 1654
PleI	GAGTC	4 cut(s)	207, 339, 1118, 1713
PpsI	GAGTC	4 cut(s)	207, 339, 1118, 1713
PpuMI	RGGWCCY	2 cut(s)	75, 1469
PshBI	ATTAAT	1 cut(s)	386
Psp5II	RGGWCCY	2 cut(s)	75, 1469
Psp6I	CCWGG	4 cut(s)	62, 1036, 1324, 1471
PspGI	CCWGG	4 cut(s)	62, 1036, 1324, 1471
PspLI	CGTACG	1 cut(s)	631
PspN4I	GGNNCC	4 cut(s)	485, 714, 859, 1470
PspPI	GGNCC	4 cut(s)	75, 179, 857, 1469
PspPPI	RGGWCCY	2 cut(s)	75, 1469
PstNI	CAGNNNCTG	1 cut(s)	38
PsuI	RGATCY	3 cut(s)	712, 1165, 1480
RsaI	GTAC	1 cut(s)	633
RsaNI	GTAC	1 cut(s)	632
RseI	CAYNNNNRTG	3 cut(s)	338, 689, 1606
Rsr2I	CGGWCCG	1 cut(s)	179
RsrII	CGGWCCG	1 cut(s)	179
SacII	CCGCGG	1 cut(s)	178
SapI	GCTCTTC	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	386, 540, 581, 606, 851, 1686
SatI	GCNGC	3 cut(s)	27, 1023, 1653
Sau3AI	GATC	7 cut(s)	247, 427, 712, 1165, 1330, 1480, 1495
Sau96I	GGNCC	4 cut(s)	75, 179, 857, 1469
SchI	GAGTC	4 cut(s)	207, 339, 1119, 1714
ScrFI	CCNGG	5 cut(s)	64, 1038, 1326, 1473, 1618
SduI	GDGCHC	3 cut(s)	16, 308, 499
SexAI	ACCWGGT	1 cut(s)	1324
SfaNI	GCATC	3 cut(s)	705, 1219, 1603
SfcI	CTRYAG	1 cut(s)	367
Sfr303I	CCGCGG	1 cut(s)	178
SgrBI	CCGCGG	1 cut(s)	178
SinI	GGWCC	3 cut(s)	75, 179, 1469
SmiMI	CAYNNNNRTG	3 cut(s)	338, 689, 1606
SmlI	CTYRAG	3 cut(s)	580, 827, 850
SmoI	CTYRAG	3 cut(s)	580, 827, 850
SphI	GCATGC	1 cut(s)	826
Sse9I	AATT	7 cut(s)	489, 637, 996, 1184, 1359, 1443, 1516
SseBI	AGGCCT	1 cut(s)	283
SsiI	CCGC	6 cut(s)	175, 177, 218, 231, 294, 703
SspI	AATATT	1 cut(s)	754
SspMI	CTAG	4 cut(s)	978, 1103, 1169, 1256
StuI	AGGCCT	1 cut(s)	283
StyD4I	CCNGG	5 cut(s)	62, 1036, 1324, 1471, 1616
StyI	CCWWGG	2 cut(s)	882, 1408
TaaI	ACNGT	5 cut(s)	371, 746, 1126, 1145, 1176
TaiI	ACGT	1 cut(s)	633
TaqI	TCGA	4 cut(s)	278, 971, 1287, 1557
TaqII	GACCGA	1 cut(s)	818
TasI	AATT	7 cut(s)	489, 637, 996, 1184, 1359, 1443, 1516
TfiI	GAWTC	5 cut(s)	55, 275, 511, 1041, 1661
Tru1I	TTAA	6 cut(s)	386, 540, 581, 606, 851, 1686
Tru9I	TTAA	6 cut(s)	386, 540, 581, 606, 851, 1686
TscAI	CASTG	3 cut(s)	573, 1070, 1129
TseFI	GTSAC	5 cut(s)	1000, 1120, 1150, 1372, 1420
TseI	GCWGC	3 cut(s)	26, 1022, 1652
Tsp45I	GTSAC	5 cut(s)	1000, 1120, 1150, 1372, 1420
TspDTI	ATGAA	4 cut(s)	277, 288, 404, 887
TspGWI	ACGGA	2 cut(s)	649, 1473
TspRI	CASTG	3 cut(s)	573, 1070, 1129
Van91I	CCANNNNNTGG	3 cut(s)	38, 262, 506
Vha464I	CTTAAG	2 cut(s)	580, 850
VpaK11BI	GGWCC	3 cut(s)	75, 179, 1469
VspI	ATTAAT	1 cut(s)	386
XapI	RAATTY	2 cut(s)	637, 1516
XbaI	TCTAGA	1 cut(s)	1168
XceI	RCATGY	4 cut(s)	226, 826, 1029, 1342
XcmI	CCANNNNNNNNNTGG	1 cut(s)	356
XmiI	GTMKAC	1 cut(s)	527
XmnI	GAANNNNTTC	2 cut(s)	414, 1520
XspI	CTAG	4 cut(s)	978, 1103, 1169, 1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.