Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007747

Physical Location & Seq

Genomic Coordinates Forward (+)

49452497 .. 49458786

Gene Structure 6290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00429090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGCTTCTTGGGTGCTGTTACCGGTTGCTCCGGTAACCAGTCGATGCCTGGTGGCTCCGGTGAGGTCCCAGAGGTCCTCCTCCATCTGTGTTCGATCGTCTCTCGACACAAATGTGTCTGACATGAGTGTAAATGCTCCAAAAGGGTTGTTTCCACCTGAACCTGAACACTATCGAGGGCCGAAGCTGAAAGTGGCTATTATTGGAGCTGGGCTTGCAGGCATGTCAACAGCTGTTGAGCTTTTGGATCAAGGCCATGAGTGTTTGAGTAAGCTCGCTTCATCTTATTCTGTGGATATCTACGAGTCAAGGCCTTTCATTGGTGGAAAAGTAGGCTCTTTTGTTGATAAACGTGGAAATCACATTGAAATGGGACTCCACGTGGGTGCAGAAGAAAATCTACTTGTGAAGGATCATACTCACACTTTTGTAAATAGAGGGGGTCAAATTGGTGAACTTGATTTTCGATTTCCAATTGGAGCCCCCATACATGGGATTCTTGCGTTTTTATCTACAAATCAGATCAAGACTTATGATAAAGCAAGAAATGCATTGGCTCTTGCATTGAGTCCTGTCGTCAGGGCTCTGGTTGATCCAGATGGAGCATTGAGTGATGTGCGGAATTTGGATAGCATAAGCTTCTCAGATTGGTTCATGTCCAAAGGTGGCACACGCACGAGTATCCAGAGAATGTGGGATCCTGTTGCGTACGCTCTTGGGTTCATTGACTGTGACAACATCAGCGCTCGTTGTATGCTCACTATATTCACGTTGTTTGCCACTAAGACCGAGGCATCCCTGCTTCGCATGCTCAAGGGTTCTCCTGATGTTTACTTGAGTGGACCCATCAGACAGTATATCATTGACAAGGGGGAAGGTACTTTAAATATAAGAGCTTTATGTGGCATTTTGGAGATAATGGCTTATTTTTATTCTTATATTTCTCCTATATTTGTATCTCCTTTCCTGCTGGAAAGGTTTCATCTTAGGTGGGGATGTAGAGAGATATTGTATGATAAATCTGCTGATGGGGAAACTTATGTCGCTGGCCTTGCAATGTCTAAGGCTACTAATAAGCAGACTGTGAAAGCAGATGCCTATGTTGCAGCATGCGATGTGCCTGGAATCAAGAGATTGCTTCCGTCCCAGTGGAGGGAATGGGATTTTTTCAATAATATCTATGAACTAGTTGGAGTTCCTGTTGTCACTGTACAACTTAGATACGATGGCTGGGTCACAGAGATGCAGGATCTTGAACGGTCAAGGCAATTGAAGCAAGCTTTGGGATTGGATAATCTTCTCTATACTCCCGATGCTGATTTTTCATGCTTTGCTGATCTAGCACTTGCTTCTCCAGAAGACTACTACATTGAAGGACAAGGTTCACTCCTGCAATGTGTGTTGACACCAGGTGATCCTTACATGCCTCTGCCAAACGAAGAAATTATAGCAAAAGTCACGAAACAGGTTTTGGCTTTATTCCCATCATCGCAAGGCTTAGAAGTCACTTGGTCATCAGTTGTCAAAATTGGGCAGTCTCTATATCGTGAAGGACCTGGTAAAGATCCATTTAGACCAGATCAGAAGACACCAGTGAAAAATTTCTTCCTTGCGGGATCATACACAAAACAAGACTATATAGATAGCATGGAAGGGGCAACTTTATCTGGCAGACGAGCTTCTGCCTACATATGCAATGCTGGGGAAGAGTTGGTGGAATTGCGAAAGAAACTTGCATCCCAAGAGGGGAATACAAAAGCTGCTAATACTACTGATGAGCTGAGTCTTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009509 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016119 GO:0016120 GO:0016491 GO:0016627 GO:0016635 GO:0031967 GO:0031975 GO:0042214 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046246 GO:0052886 GO:0052889 GO:0055114 GO:0071704 GO:1901175 GO:1901177 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

597

Amino Acids

65.79

Weight (kDa)

5.77

Isoelectric Point (pI)

48.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	67 - 128	1.3e-06	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	72 - 564	3.8e-54	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04870 AT3G04870 AT3G04870 AT3G04870
fragaria_vesca	FvH4_6g03420 FvH4_6g03420
malus_domestica	MD04G1220900.v1.1 MD12G1237300.v1.1
prunus_persica	Prupe.6G340000_v2.0.a1 Prupe.6G340000_v2.0.a1
pyrus_communis	pycom04g19540 pycom12g21820
rosa_chinensis	RchiOBHm_Chr3g0451921
rosa_laevigata	RLG00000025638
rosa_multiflora	Rmu_sc0002901.1_g000003
rosa_roxburghii	Rroxscaffold_164G00436190 Rroxscaffold_6G00429090
rosa_rugosa	Rorug02G0637300 Rorug02G0637400
rosa_samantha	Rh3AG039100 Rh3BG040400 Rh3CG038900 Rh3DG039600
rosa_wichuraiana	Rw3G002920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	619, 1613
AclWI	GGATC	9 cut(s)	255, 420, 587, 692, 705, 1257, 1409, 1559, 1624
AcsI	RAATTY	2 cut(s)	622, 1600
AcvI	CACGTG	1 cut(s)	382
AdeI	CACNNNGTG	1 cut(s)	1412
AfaI	GTAC	3 cut(s)	710, 880, 1212
AfeI	AGCGCT	1 cut(s)	745
AfiI	CCNNNNNNNGG	6 cut(s)	320, 491, 492, 1152, 1153, 1746
AgeI	ACCGGT	1 cut(s)	22
AgsI	TTSAA	5 cut(s)	368, 1171, 1256, 1273, 1373
AhlI	ACTAGT	1 cut(s)	1186
AjnI	CCWGG	4 cut(s)	48, 1120, 1408, 1555
AjuI	GAANNNNNNNTTGG	4 cut(s)	1265, 1297, 1454, 1486
AleI	CACNNNNGTG	2 cut(s)	113, 384
Alw26I	GTCTC	2 cut(s)	105, 1542
AlwI	GGATC	9 cut(s)	255, 420, 587, 692, 705, 1257, 1409, 1559, 1624
Aor51HI	AGCGCT	1 cut(s)	745
AoxI	GGCC	4 cut(s)	179, 253, 311, 1048
ApeKI	GCWGC	2 cut(s)	1106, 1760
ApoI	RAATTY	2 cut(s)	622, 1600
AsiGI	ACCGGT	1 cut(s)	22
Asp700I	GAANNNNTTC	2 cut(s)	978, 1601
AspLEI	GCGC	1 cut(s)	746
AspS9I	GGNCC	5 cut(s)	66, 75, 179, 842, 1553
AsuHPI	GGTGA	3 cut(s)	73, 464, 1424
AvaII	GGWCC	4 cut(s)	66, 75, 842, 1553
BamHI	GGATCC	1 cut(s)	697
BanII	GRGCYC	2 cut(s)	484, 586
BarI	GAAGNNNNNNTAC	4 cut(s)	262, 294, 384, 416
BauI	CACGAG	1 cut(s)	676
BbrPI	CACGTG	1 cut(s)	382
BbsI	GAAGAC	2 cut(s)	1365, 1592
BbvI	GCAGC	2 cut(s)	1118, 1747
BccI	CCATC	6 cut(s)	92, 593, 854, 1022, 1220, 1492
BciT130I	CCWGG	4 cut(s)	50, 1122, 1410, 1557
BciVI	GTATCC	1 cut(s)	692
BcoDI	GTCTC	2 cut(s)	105, 1542
BcuI	ACTAGT	1 cut(s)	1186
BfaI	CTAG	2 cut(s)	1187, 1340
BfoI	RGCGCY	1 cut(s)	747
BfuI	GTATCC	1 cut(s)	692
BisI	GCNGC	2 cut(s)	1107, 1761
BlsI	GCNGC	2 cut(s)	1108, 1762
Bme1390I	CCNGG	4 cut(s)	50, 1122, 1410, 1557
Bme18I	GGWCC	4 cut(s)	66, 75, 842, 1553
BmgT120I	GGNCC	5 cut(s)	66, 75, 179, 842, 1553
BmiI	GGNNCC	5 cut(s)	57, 68, 481, 699, 844
BmrFI	CCNGG	4 cut(s)	50, 1122, 1410, 1557
BmrI	ACTGGG	1 cut(s)	1141
BmsI	GCATC	6 cut(s)	35, 803, 1084, 1233, 1303, 1745
BmuI	ACTGGG	1 cut(s)	1141
BpiI	GAAGAC	2 cut(s)	1365, 1592
BpmI	CTGGAG	1 cut(s)	1338
BpuEI	CTTGAG	2 cut(s)	797, 856
BsaAI	YACGTR	1 cut(s)	382
BsaJI	CCNNGG	1 cut(s)	789
BsaWI	WCCGGW	3 cut(s)	22, 31, 58
BsaXI	ACNNNNNCTCC	2 cut(s)	1185, 1215
Bsc4I	CCNNNNNNNGG	6 cut(s)	320, 491, 492, 1152, 1153, 1746
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	3 cut(s)	39, 1147, 1592
Bse3DI	GCAATG	3 cut(s)	1062, 1400, 1702
BseBI	CCWGG	4 cut(s)	50, 1122, 1410, 1557
BseDI	CCNNGG	1 cut(s)	789
BseGI	GGATG	3 cut(s)	794, 1001, 1736
BseLI	CCNNNNNNNGG	6 cut(s)	320, 491, 492, 1152, 1153, 1746
BseMI	GCAATG	3 cut(s)	1062, 1400, 1702
BseMII	CTCAG	2 cut(s)	657, 1772
BseNI	ACTGG	3 cut(s)	39, 1147, 1592
BseRI	GAGGAG	1 cut(s)	70
BseXI	GCAGC	2 cut(s)	1118, 1747
BseYI	CCCAGC	3 cut(s)	209, 1230, 1700
BsgI	GTGCAG	1 cut(s)	408
Bsh1285I	CGRYCG	1 cut(s)	98
BshFI	GGCC	4 cut(s)	181, 255, 313, 1050
BshTI	ACCGGT	1 cut(s)	22
BsiEI	CGRYCG	1 cut(s)	98
BsiSI	CCGG	3 cut(s)	23, 32, 59
BsiWI	CGTACG	1 cut(s)	708
BslFI	GGGAC	3 cut(s)	52, 387, 1129
BslI	CCNNNNNNNGG	6 cut(s)	320, 491, 492, 1152, 1153, 1746
BsmAI	GTCTC	2 cut(s)	105, 1542
BsmBI	CGTCTC	1 cut(s)	105
BsmFI	GGGAC	3 cut(s)	52, 387, 1129
BsnI	GGCC	4 cut(s)	181, 255, 313, 1050
Bsp1286I	GDGCHC	2 cut(s)	484, 586
Bsp1407I	TGTACA	1 cut(s)	1210
BspACI	CCGC	2 cut(s)	619, 1613
BspANI	GGCC	4 cut(s)	181, 255, 313, 1050
BspCNI	CTCAG	2 cut(s)	656, 1773
BspLI	GGNNCC	5 cut(s)	57, 68, 481, 699, 844
BspPI	GGATC	9 cut(s)	255, 420, 587, 692, 705, 1257, 1409, 1559, 1624
BsrDI	GCAATG	3 cut(s)	1062, 1400, 1702
BsrFI	RCCGGY	1 cut(s)	22
BsrGI	TGTACA	1 cut(s)	1210
BsrI	ACTGG	3 cut(s)	39, 1147, 1592
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	1 cut(s)	789
BssSI	CACGAG	1 cut(s)	676
Bst2BI	CACGAG	1 cut(s)	676
Bst2UI	CCWGG	4 cut(s)	50, 1122, 1410, 1557
Bst4CI	ACNGT	5 cut(s)	731, 855, 1084, 1210, 1260
Bst6I	CTCTTC	1 cut(s)	1701
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstAUI	TGTACA	1 cut(s)	1210
BstBAI	YACGTR	1 cut(s)	382
BstC8I	GCNNGC	7 cut(s)	216, 220, 276, 809, 1048, 1111, 1278
BstDEI	CTNAG	7 cut(s)	643, 783, 986, 1062, 1217, 1498, 1781
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	3 cut(s)	794, 1001, 1736
BstH2I	RGCGCY	1 cut(s)	747
BstHHI	GCGC	1 cut(s)	746
BstMAI	GTCTC	2 cut(s)	105, 1542
BstMCI	CGRYCG	1 cut(s)	98
BstMWI	GCNNNNNNNGC	7 cut(s)	215, 548, 808, 1052, 1103, 1273, 1340
BstNI	CCWGG	4 cut(s)	50, 1122, 1410, 1557
BstNSI	RCATGY	4 cut(s)	226, 811, 1113, 1426
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	4 cut(s)	48, 1120, 1408, 1555
BstV1I	GCAGC	2 cut(s)	1118, 1747
BstV2I	GAAGAC	2 cut(s)	1365, 1592
BstX2I	RGATCY	3 cut(s)	697, 1249, 1564
BstYI	RGATCY	3 cut(s)	697, 1249, 1564
BsuI	GTATCC	1 cut(s)	692
BsuRI	GGCC	4 cut(s)	181, 255, 313, 1050
BtgZI	GCGATG	2 cut(s)	1128, 1473
BtsCI	GGATG	3 cut(s)	794, 1001, 1736
BtsIMutI	CAGTG	3 cut(s)	1154, 1206, 1599
Cac8I	GCNNGC	7 cut(s)	216, 220, 276, 809, 1048, 1111, 1278
CfoI	GCGC	1 cut(s)	746
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	5 cut(s)	66, 75, 179, 842, 1553
CsiI	ACCWGGT	2 cut(s)	1408, 1555
Csp6I	GTAC	3 cut(s)	709, 879, 1211
CspAI	ACCGGT	1 cut(s)	22
CviQI	GTAC	3 cut(s)	709, 879, 1211
DdeI	CTNAG	7 cut(s)	643, 783, 986, 1062, 1217, 1498, 1781
DraI	TTTAAA	1 cut(s)	885
DraIII	CACNNNGTG	1 cut(s)	1412
Eam1104I	CTCTTC	1 cut(s)	1701
EarI	CTCTTC	1 cut(s)	1701
Eco147I	AGGCCT	1 cut(s)	313
Eco24I	GRGCYC	2 cut(s)	484, 586
Eco32I	GATATC	1 cut(s)	298
Eco47I	GGWCC	4 cut(s)	66, 75, 842, 1553
Eco47III	AGCGCT	1 cut(s)	745
Eco72I	CACGTG	1 cut(s)	382
Eco91I	GGTNACC	1 cut(s)	34
EcoO109I	RGGNCCY	3 cut(s)	66, 75, 1553
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	4 cut(s)	48, 1120, 1408, 1555
EcoRV	GATATC	1 cut(s)	298
EcoT22I	ATGCAT	1 cut(s)	553
EcoT38I	GRGCYC	2 cut(s)	484, 586
Esp3I	CGTCTC	1 cut(s)	105
FaqI	GGGAC	3 cut(s)	52, 387, 1129
FauI	CCCGC	1 cut(s)	1606
FauNDI	CATATG	1 cut(s)	1691
Fnu4HI	GCNGC	2 cut(s)	1107, 1761
FokI	GGATG	3 cut(s)	781, 1008, 1723
FriOI	GRGCYC	2 cut(s)	484, 586
Fsp4HI	GCNGC	2 cut(s)	1107, 1761
FspBI	CTAG	2 cut(s)	1187, 1340
GlaI	GCGC	1 cut(s)	745
GluI	GCNGC	2 cut(s)	1107, 1761
GsaI	CCCAGC	3 cut(s)	213, 1234, 1704
GsuI	CTGGAG	1 cut(s)	1338
HaeII	RGCGCY	1 cut(s)	747
HaeIII	GGCC	4 cut(s)	181, 255, 313, 1050
HapII	CCGG	3 cut(s)	23, 32, 59
HhaI	GCGC	1 cut(s)	746
Hin6I	GCGC	1 cut(s)	744
HinP1I	GCGC	1 cut(s)	744
HincII	GTYRAC	2 cut(s)	228, 1404
HindII	GTYRAC	2 cut(s)	228, 1404
HindIII	AAGCTT	2 cut(s)	637, 1278
HinfI	GANTC	6 cut(s)	305, 375, 496, 568, 1125, 1783
HpaII	CCGG	3 cut(s)	23, 32, 59
HphI	GGTGA	3 cut(s)	73, 464, 1424
Hpy166II	GTNNAC	6 cut(s)	228, 455, 832, 842, 1385, 1404
Hpy188I	TCNGA	5 cut(s)	121, 522, 646, 851, 1584
Hpy8I	GTNNAC	6 cut(s)	228, 455, 832, 842, 1385, 1404
HpyAV	CCTTC	5 cut(s)	403, 869, 1367, 1544, 1646
HpyCH4III	ACNGT	5 cut(s)	731, 855, 1084, 1210, 1260
HpyCH4IV	ACGT	3 cut(s)	352, 381, 770
HpyF10VI	GCNNNNNNNGC	7 cut(s)	215, 548, 808, 1052, 1103, 1273, 1340
HpyF3I	CTNAG	7 cut(s)	643, 783, 986, 1062, 1217, 1498, 1781
HpySE526I	ACGT	3 cut(s)	352, 381, 770
HspAI	GCGC	1 cut(s)	744
LmnI	GCTCC	6 cut(s)	34, 61, 142, 206, 479, 602
Lsp1109I	GCAGC	2 cut(s)	1118, 1747
LweI	GCATC	6 cut(s)	35, 803, 1084, 1233, 1303, 1745
MabI	ACCWGGT	2 cut(s)	1408, 1555
MaeI	CTAG	2 cut(s)	1187, 1340
MaeII	ACGT	3 cut(s)	352, 381, 770
MaeIII	GTNAC	7 cut(s)	18, 34, 731, 1204, 1234, 1456, 1504
MboII	GAAGA	7 cut(s)	404, 1289, 1370, 1451, 1597, 1597, 1718
MfeI	CAATTG	2 cut(s)	474, 1268
MflI	RGATCY	3 cut(s)	697, 1249, 1564
MhlI	GDGCHC	2 cut(s)	484, 586
MluCI	AATT	8 cut(s)	447, 474, 622, 1268, 1443, 1527, 1600, 1718
MlyI	GAGTC	4 cut(s)	314, 369, 577, 1792
MmeI	TCCRAC	1 cut(s)	1171
Mph1103I	ATGCAT	1 cut(s)	553
MroXI	GAANNNNTTC	2 cut(s)	978, 1601
MseI	TTAA	1 cut(s)	884
MslI	CAYNNNNRTG	4 cut(s)	113, 368, 384, 1241
MspA1I	CMGCKG	1 cut(s)	233
MspI	CCGG	3 cut(s)	23, 32, 59
MspR9I	CCNGG	4 cut(s)	50, 1122, 1410, 1557
MunI	CAATTG	2 cut(s)	474, 1268
MvaI	CCWGG	4 cut(s)	50, 1122, 1410, 1557
MwoI	GCNNNNNNNGC	7 cut(s)	215, 548, 808, 1052, 1103, 1273, 1340
NdeI	CATATG	1 cut(s)	1691
NlaIV	GGNNCC	5 cut(s)	57, 68, 481, 699, 844
NmuCI	GTSAC	5 cut(s)	731, 1204, 1234, 1456, 1504
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	4 cut(s)	226, 811, 1113, 1426
OliI	CACNNNNGTG	2 cut(s)	113, 384
PaeI	GCATGC	2 cut(s)	811, 1113
PceI	AGGCCT	1 cut(s)	313
PdmI	GAANNNNTTC	2 cut(s)	978, 1601
PfeI	GAWTC	2 cut(s)	496, 1125
Pfl23II	CGTACG	1 cut(s)	708
PinAI	ACCGGT	1 cut(s)	22
PkrI	GCNGC	2 cut(s)	1108, 1762
Ple19I	CGATCG	1 cut(s)	98
PleI	GAGTC	4 cut(s)	313, 369, 576, 1791
PmaCI	CACGTG	1 cut(s)	382
PmlI	CACGTG	1 cut(s)	382
PpsI	GAGTC	4 cut(s)	313, 369, 576, 1791
Ppu21I	YACGTR	1 cut(s)	382
PpuMI	RGGWCCY	3 cut(s)	66, 75, 1553
Psp5II	RGGWCCY	3 cut(s)	66, 75, 1553
Psp6I	CCWGG	4 cut(s)	48, 1120, 1408, 1555
PspCI	CACGTG	1 cut(s)	382
PspEI	GGTNACC	1 cut(s)	34
PspFI	CCCAGC	3 cut(s)	209, 1230, 1700
PspGI	CCWGG	4 cut(s)	48, 1120, 1408, 1555
PspLI	CGTACG	1 cut(s)	708
PspN4I	GGNNCC	5 cut(s)	57, 68, 481, 699, 844
PspPI	GGNCC	5 cut(s)	66, 75, 179, 842, 1553
PspPPI	RGGWCCY	3 cut(s)	66, 75, 1553
PsuI	RGATCY	3 cut(s)	697, 1249, 1564
PvuI	CGATCG	1 cut(s)	98
PvuII	CAGCTG	1 cut(s)	233
RsaI	GTAC	3 cut(s)	710, 880, 1212
RsaNI	GTAC	3 cut(s)	709, 879, 1211
RseI	CAYNNNNRTG	4 cut(s)	113, 368, 384, 1241
SaqAI	TTAA	1 cut(s)	884
SatI	GCNGC	2 cut(s)	1107, 1761
Sau96I	GGNCC	5 cut(s)	66, 75, 179, 842, 1553
SchI	GAGTC	4 cut(s)	314, 369, 577, 1792
ScrFI	CCNGG	4 cut(s)	50, 1122, 1410, 1557
SduI	GDGCHC	2 cut(s)	484, 586
SexAI	ACCWGGT	2 cut(s)	1408, 1555
SfaNI	GCATC	6 cut(s)	35, 803, 1084, 1233, 1303, 1745
SinI	GGWCC	4 cut(s)	66, 75, 842, 1553
SmiMI	CAYNNNNRTG	4 cut(s)	113, 368, 384, 1241
SmlI	CTYRAG	2 cut(s)	812, 835
SmoI	CTYRAG	2 cut(s)	812, 835
SpeI	ACTAGT	1 cut(s)	1186
SphI	GCATGC	2 cut(s)	811, 1113
Sse9I	AATT	8 cut(s)	447, 474, 622, 1268, 1443, 1527, 1600, 1718
SseBI	AGGCCT	1 cut(s)	313
SsiI	CCGC	2 cut(s)	619, 1613
SspMI	CTAG	2 cut(s)	1187, 1340
StuI	AGGCCT	1 cut(s)	313
StyD4I	CCNGG	4 cut(s)	48, 1120, 1408, 1555
TaaI	ACNGT	5 cut(s)	731, 855, 1084, 1210, 1260
TaiI	ACGT	3 cut(s)	355, 384, 773
TaqI	TCGA	5 cut(s)	43, 94, 105, 175, 466
TaqII	GACCGA	1 cut(s)	803
TasI	AATT	8 cut(s)	447, 474, 622, 1268, 1443, 1527, 1600, 1718
TatI	WGTACW	1 cut(s)	1210
TfiI	GAWTC	2 cut(s)	496, 1125
Tru1I	TTAA	1 cut(s)	884
Tru9I	TTAA	1 cut(s)	884
TscAI	CASTG	3 cut(s)	1154, 1213, 1599
TseFI	GTSAC	5 cut(s)	731, 1204, 1234, 1456, 1504
TseI	GCWGC	2 cut(s)	1106, 1760
Tsp45I	GTSAC	5 cut(s)	731, 1204, 1234, 1456, 1504
TspDTI	ATGAA	7 cut(s)	270, 307, 643, 712, 971, 1197, 1314
TspGWI	ACGGA	1 cut(s)	1131
TspRI	CASTG	3 cut(s)	1154, 1213, 1599
VpaK11BI	GGWCC	4 cut(s)	66, 75, 842, 1553
XapI	RAATTY	2 cut(s)	622, 1600
XceI	RCATGY	4 cut(s)	226, 811, 1113, 1426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XmnI	GAANNNNTTC	2 cut(s)	978, 1601
XspI	CTAG	2 cut(s)	1187, 1340
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.