Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0010358

Physical Location & Seq

Genomic Coordinates Reverse (-)

1050157 .. 1068474

Gene Structure 18318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1002800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGTCTCTCAATATGAAAACCCTAACACAAGCCCTCGCCAAGACCGCTGCGGTCATCGAAAAAACCGTACAGACCACGGTCCAGGAGGTCGCCGGACCCAAGCCTCTTCAGGACCACGAGCTCTTCGACCAGATCGGGTCCGCCGGACCGGGCCTGGTCTGGAAGCTCTATTCGGCCAAGGCGGCTCGTGAGTCTACGCGCGCGCACCAGTACCCCACCGTCTGCGTCTGGGTTTTGGATAAGAAGGCTCTGTCGGAGGCGCGCATGCGCGCCGGATTGCCCAAGGCGGCGGAAGATGGGTTTTTGGAGATCATTCGAGCTGATGCGGCGAGGCTGGTGAGGCTGAGGCACCCCGGGGTGGTGCACGTGGTGCAGGCTCTGGATGAGAACAAGAATGCCATGGCAATGGTGACGGAGCCGTTGTTTGCGTCTGTGGCAAATGCGCTTGGGAATGTGGAGAATGTGGCTAAGGTGCCCAAGGAGCTTAAAGGAATGGAAATGGGTATATTGGAGGTGAAGCATGGTTTGCTCCAGATAGCAGAATCCTTAGACTTTCTTCATAACAATGCGCGTCTCATTCATCGGGCCATATCACCTGAGAATGTCTTTATTACATCAAGTGGAGCTTGGAAGCTTGGTGGATTTGGTTTTGCAATCTCAACAGATCAAGCCTCAGGAAATATGGCTAATGTTCAGGCATTCCATTATGCTGAATATGATGTTGAGGACTCTGTGCTGCCCCTTCAGCCATCACTGAACTACACTGCTCCTGAACTTGCTAGGAGCAAAGCATCCTCAGCTGGATGTTCTTCTGATATTTTCAGTTTTGGTTGTCTTGCCTACCACTTGATTGCTCACAAGCCTTTGCTTGACTGCCACAACAATGTCAAGATGTATATGAATACCTTAAGCTACTTATCCAGTGAAGCTTTTTCCCCTATTCCTCCAGAGTTAGTTCCTGACTTGCAAAGGATGCTTTCTACGAATGAGGCTTTCAGGCCAACATCAATGGATTTTACAGGTTCTCCATTTTTCCGGGATGACACTAGGTTGCGTGCTCTTCGCTTTCTCGACCACATGCTTGAAAGAGATAACATGCAGAAGTCCGAATTCCTGAAAGCATTATCTGATATGTGGAAAGATTTCGATTCTCGTGTATTGCGATATAAGGTACTGCCGCCGCTTTGTGCAGAACTTAGGAATTTGGTTATGCAACCAATGATTCTGCCCATGGTTCTCACGATTGCAGAGTCTCAGGATAAGAATGACTTTGAGTTATCAACATTGCCAGCCCTTGTTCCTGTCCTGAGCACCGCTGTGGGTGACACATTATTGTTGCTTTTGAAGCATGCAGAACTTATTATCAACAAGACTATGCAAGATCACTTGATATCACATGTCCTGCCCATGATTGTTCGAGCATATGGTGATGGCGATGCTCGCATACAGGAGGAGGTTTTGAGGAAGTCTTCTTTCCTTGCCAAAAAAATTGATGTTCAGCTAGTGAAACAAGCTATTCTGCCTCGTGTTCATGGCTTAGCTCTTAAGACAACTGTTGCCGCGGTGAGAGTCAATGCTTTGCTTTGTCTAGGAGATTTGATTCCTACACTCGATAAGCATGCTATTTTGGATATTCTGCAAACAATTCAGCGTTGTACAGCAGTTGACCGCTCTGCTCCTACCCTTATGTGTACTCTTGGGGTGTCAAACTCAATTCTTAAGCAGCATGGGGTAGAATTTGTTGCAGAGCATGTCCTCCCGCTGCTCATACCTCTTCTTACTGCCCAGCAATTAAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATTCTGAGGAAGATAGAGGAAAAACGGGGAGTTACTGTGACGGATTCTGGAATTCCAGAGGTAAAACCATCTCCATCTGTCAACGGACTCCACTCCCAAGTCCCAAGCAAAATAAGCGGAAATGTTGCCACCGCTGCAAACAGCGGTCCAGCATGGGATGAAGATTGGGGTCCTATAAAAAAGCAGCCCTCCAATTCCCTCCAAATTTCTACAAATTCCATTACCTCCACTTATCCCACTCCGGGTAATGAACCAATTCAAGTAACTTCTTCACAGCCAAATTCCTTGTTGCGAACTACAGTAACTAGTCAGCAAACACCCGTATCATGTCCCCCAGTTGATATAGAGTGGCCTCCTCAGGCGTCTTCTGGAGTTACCCCAGTTGCTGATACTGAGAAGCAATTAAATGCAGGAGCATCATCCAGTTCCAGTTTTGATGACGTTGATCCCTTTGTTAACTGGCCCCCACGGCCTAGTGGCCAAGTAAGTGGAATGGGCCCTTCTAACAATGGTACGATAGAGCCTCCCAGAAACAAACTGTCCAGTGGATCAAACAGTATGAACCTCTACAGCGATAGCAATGATAGTTGGGCCTTTGTTACTGGAAGGTCTGTTGAGCAAATAGGACTTGGTCAAGGCAATGCAACTCCGATTACTGGTGGTTTGGGTAGCTCAGGTTTTAACCCCCCGAGTTCTATTGGATTTATGAAACAGAATCAACCGATATCAGCTTCAAATGCTTACACAGATGAAAGATCAGCTGATCTTGGGTCCATATTTGCTTCTGGAAATAATGCGCAGACAGCACCAAGACTTGCTCCTCCCCCATCAACTGCTGTAGGTCGAGGAAGAGGTAGAGGGAAGGGTGCTAGTTCAGTGTCACGCTCCAGCCATGCCAAATCGGCAACTGAACAGCCACCCCTTTTGGATCTGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002090 GO:0002092 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0006810 GO:0006897 GO:0006898 GO:0007034 GO:0007041 GO:0007154 GO:0007165 GO:0007166 GO:0007267 GO:0008150 GO:0008152 GO:0008333 GO:0009893 GO:0009966 GO:0009968 GO:0009987 GO:0010604 GO:0010646 GO:0010648 GO:0016055 GO:0016192 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0030100 GO:0030111 GO:0030178 GO:0031323 GO:0031325 GO:0031623 GO:0032879 GO:0043112 GO:0043170 GO:0044237 GO:0044260 GO:0045807 GO:0046907 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060070 GO:0060255 GO:0060627 GO:0060828 GO:0065007 GO:0071704 GO:0090090 GO:0098657 GO:0198738 GO:1905114 GO:2000286 GO:2000369 GO:2000370

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Pkinase

Protein Analysis

925

Amino Acids

99.98

Weight (kDa)

6.74

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	105 - 345	1.8e-19	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	107 - 327	1.2e-09	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22870 AT1G22870 AT1G22870 AT1G22870
fragaria_vesca	FvH4_2g00710
malus_domestica	MD05G1002800.v1.1 MD10G1003500.v1.1
prunus_persica	Prupe.8G006100_v2.0.a1
pyrus_communis	pycom05g00260 pycom10g00300
rosa_chinensis	RchiOBHm_Chr6g0251091
rosa_laevigata	RLG00000015485
rosa_multiflora	Rmu_sc0002219.1_g000007 Rmu_sc0024842.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217050
rosa_rugosa	Rorug05G0500000
rosa_samantha	Rh6AG008200 Rh6BG002900 Rh6CG005700 Rh6DG005900
rosa_wichuraiana	Rw6G000910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2634
AccB1I	GGYRCC	2 cut(s)	348, 472
AccBSI	CCGCTC	1 cut(s)	1671
AccI	GTMKAC	1 cut(s)	194
AccII	CGCG	7 cut(s)	199, 201, 203, 262, 270, 571, 1562
AclWI	GGATC	3 cut(s)	2276, 2392, 2772
AcoI	YGGCCR	2 cut(s)	174, 2314
AcsI	RAATTY	7 cut(s)	1109, 1201, 1736, 1887, 2040, 2050, 2116
AcuI	CTGAAG	2 cut(s)	92, 728
AcvI	CACGTG	1 cut(s)	367
AcyI	GRCGYC	1 cut(s)	2198
AdeI	CACNNNGTG	1 cut(s)	370
AfaI	GTAC	6 cut(s)	69, 212, 1173, 1657, 1693, 2350
AfiI	CCNNNNNNNGG	3 cut(s)	358, 2078, 2492
AflII	CTTAAG	3 cut(s)	907, 1544, 1718
AflIII	ACRYGT	1 cut(s)	1396
AgsI	TTSAA	4 cut(s)	1085, 1345, 2096, 2571
AhlI	ACTAGT	1 cut(s)	2141
AjnI	CCWGG	2 cut(s)	81, 153
AleI	CACNNNNGTG	1 cut(s)	1316
Alw21I	GWGCWC	4 cut(s)	123, 366, 1060, 1313
Alw26I	GTCTC	3 cut(s)	9, 578, 1257
Alw44I	GTGCAC	1 cut(s)	362
AlwI	GGATC	3 cut(s)	2276, 2392, 2772
AlwNI	CAGNNNCTG	2 cut(s)	379, 2222
Ama87I	CYCGRG	2 cut(s)	353, 2524
ApaI	GGGCCC	1 cut(s)	2336
ApaLI	GTGCAC	1 cut(s)	362
ApeKI	GCWGC	6 cut(s)	47, 736, 1723, 1762, 1970, 2020
ApoI	RAATTY	7 cut(s)	1109, 1201, 1736, 1887, 2040, 2050, 2116
Asp700I	GAANNNNTTC	2 cut(s)	1142, 2091
AsuC2I	CCSGG	5 cut(s)	150, 354, 355, 1037, 2079
AsuHPI	GGTGA	7 cut(s)	349, 421, 526, 585, 1334, 1439, 1576
AvaI	CYCGRG	2 cut(s)	353, 2524
AvaII	GGWCC	8 cut(s)	79, 95, 112, 138, 146, 1982, 2006, 2607
AxyI	CCTNAGG	2 cut(s)	673, 2193
BaeGI	GKGCMC	3 cut(s)	366, 477, 2336
BaeI	ACNNNNGTAYC	2 cut(s)	2142, 2175
BalI	TGGCCA	1 cut(s)	2316
BanI	GGYRCC	2 cut(s)	348, 472
BanII	GRGCYC	2 cut(s)	123, 2336
BauI	CACGAG	4 cut(s)	116, 186, 1152, 1524
BbrPI	CACGTG	1 cut(s)	367
BbsI	GAAGAC	2 cut(s)	1461, 2193
Bbv12I	GWGCWC	4 cut(s)	123, 366, 1060, 1313
BbvCI	CCTCAGC	2 cut(s)	344, 796
BbvI	GCAGC	6 cut(s)	34, 723, 1735, 1749, 1957, 2032
BccI	CCATC	6 cut(s)	290, 757, 1424, 1912, 1918, 2671
BceAI	ACGGC	2 cut(s)	403, 2321
BcgI	CGANNNNNNTGC	2 cut(s)	1601, 1635
BciT130I	CCWGG	2 cut(s)	83, 155
BcnI	CCSGG	5 cut(s)	150, 354, 355, 1037, 2079
BcoDI	GTCTC	3 cut(s)	9, 578, 1257
BcuI	ACTAGT	1 cut(s)	2141
BfaI	CTAG	7 cut(s)	780, 1047, 1502, 1589, 2142, 2310, 2706
BfmI	CTRYAG	3 cut(s)	2133, 2404, 2673
BfrI	CTTAAG	3 cut(s)	907, 1544, 1718
BglI	GCCNNNNNGGC	3 cut(s)	182, 2305, 2738
BlpI	GCTNAGC	1 cut(s)	1537
Bme1390I	CCNGG	7 cut(s)	83, 150, 155, 354, 355, 1037, 2079
Bme18I	GGWCC	8 cut(s)	79, 95, 112, 138, 146, 1982, 2006, 2607
BmeT110I	CYCGRG	2 cut(s)	353, 2524
BmiI	GGNNCC	9 cut(s)	97, 139, 350, 417, 474, 2007, 2300, 2334, 2608
BmrFI	CCNGG	7 cut(s)	83, 150, 155, 354, 355, 1037, 2079
BmrI	ACTGGG	2 cut(s)	2165, 2210
BmsI	GCATC	5 cut(s)	313, 800, 963, 1426, 2261
BmuI	ACTGGG	2 cut(s)	2165, 2210
BoxI	GACNNNNGTC	1 cut(s)	77
BpiI	GAAGAC	2 cut(s)	1461, 2193
BpmI	CTGGAG	4 cut(s)	515, 930, 2226, 2707
Bpu10I	CCTNAGC	5 cut(s)	344, 468, 796, 1307, 2509
Bpu1102I	GCTNAGC	1 cut(s)	1537
BpuMI	CCSGG	5 cut(s)	150, 354, 355, 1037, 2079
BsaAI	YACGTR	1 cut(s)	367
BsaHI	GRCGYC	1 cut(s)	2198
BsaXI	ACNNNNNCTCC	6 cut(s)	407, 437, 1009, 1039, 1857, 1887
Bsc4I	CCNNNNNNNGG	3 cut(s)	358, 2078, 2492
Bse21I	CCTNAGG	2 cut(s)	673, 2193
Bse3DI	GCAATG	4 cut(s)	411, 1283, 2422, 2482
BseBI	CCWGG	2 cut(s)	83, 155
BseGI	GGATG	7 cut(s)	388, 791, 809, 978, 1045, 1999, 2255
BseLI	CCNNNNNNNGG	3 cut(s)	358, 2078, 2492
BseMI	GCAATG	4 cut(s)	411, 1283, 2422, 2482
BsePI	GCGCGC	4 cut(s)	199, 201, 260, 268
BseRI	GAGGAG	3 cut(s)	1466, 2181, 2646
BseSI	GKGCMC	3 cut(s)	366, 477, 2336
BseXI	GCAGC	6 cut(s)	34, 723, 1735, 1749, 1957, 2032
BseYI	CCCAGC	1 cut(s)	1785
BsgI	GTGCAG	2 cut(s)	392, 1209
Bsh1236I	CGCG	7 cut(s)	199, 201, 203, 262, 270, 571, 1562
BshNI	GGYRCC	2 cut(s)	348, 472
BsiHKAI	GWGCWC	4 cut(s)	123, 366, 1060, 1313
BsiHKCI	CYCGRG	2 cut(s)	353, 2524
BsiSI	CCGG	7 cut(s)	93, 144, 149, 273, 354, 1036, 2078
BslFI	GGGAC	2 cut(s)	1922, 2151
BslI	CCNNNNNNNGG	3 cut(s)	358, 2078, 2492
BsmAI	GTCTC	3 cut(s)	9, 578, 1257
BsmBI	CGTCTC	1 cut(s)	578
BsmFI	GGGAC	2 cut(s)	1922, 2151
BsmI	GAATGC	2 cut(s)	400, 698
BsoBI	CYCGRG	2 cut(s)	353, 2524
Bsp120I	GGGCCC	1 cut(s)	2332
Bsp1286I	GDGCHC	6 cut(s)	123, 366, 477, 1060, 1313, 2336
Bsp1407I	TGTACA	1 cut(s)	1655
Bsp143I	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
Bsp1720I	GCTNAGC	1 cut(s)	1537
Bsp19I	CCATGG	2 cut(s)	399, 1230
BspFNI	CGCG	7 cut(s)	199, 201, 203, 262, 270, 571, 1562
BspLI	GGNNCC	9 cut(s)	97, 139, 350, 417, 474, 2007, 2300, 2334, 2608
BspPI	GGATC	3 cut(s)	2276, 2392, 2772
BspQI	GCTCTTC	2 cut(s)	128, 1065
BspT107I	GGYRCC	2 cut(s)	348, 472
BspTI	CTTAAG	3 cut(s)	907, 1544, 1718
BsrBI	CCGCTC	1 cut(s)	1671
BsrDI	GCAATG	4 cut(s)	411, 1283, 2422, 2482
BsrGI	TGTACA	1 cut(s)	1655
BssHII	GCGCGC	4 cut(s)	199, 201, 260, 268
BssMI	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
BssNI	GRCGYC	1 cut(s)	2198
BssSI	CACGAG	4 cut(s)	116, 186, 1152, 1524
BssT1I	CCWWGG	5 cut(s)	177, 282, 399, 477, 1230
Bst2BI	CACGAG	4 cut(s)	116, 186, 1152, 1524
Bst2UI	CCWGG	2 cut(s)	83, 155
Bst4CI	ACNGT	8 cut(s)	67, 79, 220, 1555, 1873, 2137, 2376, 2393
Bst6I	CTCTTC	5 cut(s)	111, 128, 1065, 1779, 2680
BstACI	GRCGYC	1 cut(s)	2198
BstAFI	CTTAAG	3 cut(s)	907, 1544, 1718
BstAPI	GCANNNNNTGC	3 cut(s)	370, 526, 973
BstAUI	TGTACA	1 cut(s)	1655
BstBAI	YACGTR	1 cut(s)	367
BstDSI	CCRYGG	5 cut(s)	75, 399, 1230, 1560, 2303
BstF5I	GGATG	7 cut(s)	388, 791, 809, 978, 1045, 1999, 2255
BstFNI	CGCG	7 cut(s)	199, 201, 203, 262, 270, 571, 1562
BstKTI	GATC	9 cut(s)	135, 312, 667, 1384, 2284, 2387, 2594, 2602, 2767
BstMAI	GTCTC	3 cut(s)	9, 578, 1257
BstMBI	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
BstNI	CCWGG	2 cut(s)	83, 155
BstNSI	RCATGY	7 cut(s)	268, 1081, 1099, 1352, 1400, 1622, 1754
BstPAI	GACNNNNGTC	1 cut(s)	77
BstSCI	CCNGG	7 cut(s)	81, 148, 153, 352, 353, 1035, 2077
BstSFI	CTRYAG	3 cut(s)	2133, 2404, 2673
BstSLI	GKGCMC	3 cut(s)	366, 477, 2336
BstUI	CGCG	7 cut(s)	199, 201, 203, 262, 270, 571, 1562
BstV1I	GCAGC	6 cut(s)	34, 723, 1735, 1749, 1957, 2032
BstV2I	GAAGAC	2 cut(s)	1461, 2193
BstX2I	RGATCY	1 cut(s)	2764
BstXI	CCANNNNNNTGG	2 cut(s)	406, 2324
BstYI	RGATCY	1 cut(s)	2764
Bsu36I	CCTNAGG	2 cut(s)	673, 2193
BtgI	CCRYGG	5 cut(s)	75, 399, 1230, 1560, 2303
BtgZI	GCGATG	1 cut(s)	1449
BtsCI	GGATG	7 cut(s)	388, 791, 809, 978, 1045, 1999, 2255
BtsI	GCAGTG	1 cut(s)	762
BtsIMutI	CAGTG	5 cut(s)	752, 762, 928, 2386, 2718
CaiI	CAGNNNCTG	2 cut(s)	379, 2222
Cfr42I	CCGCGG	1 cut(s)	1563
Cfr9I	CCCGGG	1 cut(s)	353
CpoI	CGGWCCG	1 cut(s)	146
CseI	GACGC	4 cut(s)	214, 417, 560, 2187
Csp6I	GTAC	6 cut(s)	68, 211, 1172, 1656, 1692, 2349
CspCI	CAANNNNNGTGG	1 cut(s)	2742
CspI	CGGWCCG	1 cut(s)	146
CviQI	GTAC	6 cut(s)	68, 211, 1172, 1656, 1692, 2349
DpnI	GATC	9 cut(s)	134, 311, 666, 1383, 2283, 2386, 2593, 2601, 2766
DpnII	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
DraIII	CACNNNGTG	1 cut(s)	370
EaeI	YGGCCR	2 cut(s)	174, 2314
Eam1104I	CTCTTC	5 cut(s)	111, 128, 1065, 1779, 2680
EarI	CTCTTC	5 cut(s)	111, 128, 1065, 1779, 2680
EciI	GGCGGA	2 cut(s)	130, 305
Ecl136II	GAGCTC	1 cut(s)	121
Eco130I	CCWWGG	5 cut(s)	177, 282, 399, 477, 1230
Eco24I	GRGCYC	2 cut(s)	123, 2336
Eco32I	GATATC	2 cut(s)	1392, 2562
Eco47I	GGWCC	8 cut(s)	79, 95, 112, 138, 146, 1982, 2006, 2607
Eco53kI	GAGCTC	1 cut(s)	121
Eco57I	CTGAAG	2 cut(s)	92, 728
Eco72I	CACGTG	1 cut(s)	367
Eco81I	CCTNAGG	2 cut(s)	673, 2193
Eco88I	CYCGRG	2 cut(s)	353, 2524
EcoICRI	GAGCTC	1 cut(s)	121
EcoO109I	RGGNCCY	2 cut(s)	2006, 2333
EcoRI	GAATTC	2 cut(s)	1109, 1887
EcoRII	CCWGG	2 cut(s)	81, 153
EcoRV	GATATC	2 cut(s)	1392, 2562
EcoT14I	CCWWGG	5 cut(s)	177, 282, 399, 477, 1230
EcoT38I	GRGCYC	2 cut(s)	123, 2336
ErhI	CCWWGG	5 cut(s)	177, 282, 399, 477, 1230
Esp3I	CGTCTC	1 cut(s)	578
FalI	AAGNNNNNCTT	4 cut(s)	610, 642, 1253, 1285
FaqI	GGGAC	2 cut(s)	1922, 2151
FauI	CCCGC	1 cut(s)	1767
FauNDI	CATATG	1 cut(s)	1423
FblI	GTMKAC	1 cut(s)	194
FokI	GGATG	7 cut(s)	395, 778, 816, 985, 1052, 2006, 2242
FriOI	GRGCYC	2 cut(s)	123, 2336
FspBI	CTAG	7 cut(s)	780, 1047, 1502, 1589, 2142, 2310, 2706
FspI	TGCGCA	1 cut(s)	2634
GsaI	CCCAGC	1 cut(s)	1789
GsuI	CTGGAG	4 cut(s)	515, 930, 2226, 2707
HapII	CCGG	7 cut(s)	93, 144, 149, 273, 354, 1036, 2078
HgaI	GACGC	4 cut(s)	214, 417, 560, 2187
Hin1I	GRCGYC	1 cut(s)	2198
HincII	GTYRAC	3 cut(s)	1666, 1918, 2293
HindII	GTYRAC	3 cut(s)	1666, 1918, 2293
HindIII	AAGCTT	2 cut(s)	632, 927
HpaI	GTTAAC	1 cut(s)	2293
HpaII	CCGG	7 cut(s)	93, 144, 149, 273, 354, 1036, 2078
HphI	GGTGA	7 cut(s)	349, 421, 526, 585, 1334, 1439, 1576
Hpy166II	GTNNAC	6 cut(s)	195, 364, 1666, 1692, 1918, 2293
Hpy188I	TCNGA	6 cut(s)	256, 814, 1108, 1129, 1842, 2487
Hpy8I	GTNNAC	6 cut(s)	195, 364, 1666, 1692, 1918, 2293
HpyAV	CCTTC	5 cut(s)	238, 752, 2346, 2436, 2692
HpyCH4III	ACNGT	8 cut(s)	67, 79, 220, 1555, 1873, 2137, 2376, 2393
HpyCH4IV	ACGT	2 cut(s)	366, 2277
HpySE526I	ACGT	2 cut(s)	366, 2277
Hsp92I	GRCGYC	1 cut(s)	2198
KspAI	GTTAAC	1 cut(s)	2293
KspI	CCGCGG	1 cut(s)	1563
Kzo9I	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
LguI	GCTCTTC	2 cut(s)	128, 1065
Lsp1109I	GCAGC	6 cut(s)	34, 723, 1735, 1749, 1957, 2032
LweI	GCATC	5 cut(s)	313, 800, 963, 1426, 2261
MaeI	CTAG	7 cut(s)	780, 1047, 1502, 1589, 2142, 2310, 2706
MaeII	ACGT	2 cut(s)	366, 2277
MaeIII	GTNAC	9 cut(s)	409, 1322, 1867, 1873, 2098, 2137, 2209, 2434, 2715
MalI	GATC	9 cut(s)	134, 311, 666, 1383, 2283, 2386, 2593, 2601, 2766
MauBI	CGCGCGCG	1 cut(s)	199
MbiI	CCGCTC	1 cut(s)	1671
MboI	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
MflI	RGATCY	1 cut(s)	2764
MhlI	GDGCHC	6 cut(s)	123, 366, 477, 1060, 1313, 2336
MlsI	TGGCCA	1 cut(s)	2316
MluNI	TGGCCA	1 cut(s)	2316
MlyI	GAGTC	5 cut(s)	200, 722, 1259, 1578, 1917
MmeI	TCCRAC	1 cut(s)	234
Mox20I	TGGCCA	1 cut(s)	2316
MroXI	GAANNNNTTC	2 cut(s)	1142, 2091
MscI	TGGCCA	1 cut(s)	2316
MseI	TTAA	8 cut(s)	486, 908, 1545, 1719, 1793, 2240, 2292, 2517
MslI	CAYNNNNRTG	4 cut(s)	404, 564, 882, 1316
Msp20I	TGGCCA	1 cut(s)	2316
MspA1I	CMGCKG	8 cut(s)	47, 800, 1316, 1562, 1762, 1970, 1980, 2597
MspCI	CTTAAG	3 cut(s)	907, 1544, 1718
MspI	CCGG	7 cut(s)	93, 144, 149, 273, 354, 1036, 2078
MspR9I	CCNGG	7 cut(s)	83, 150, 155, 354, 355, 1037, 2079
Mva1269I	GAATGC	2 cut(s)	400, 698
MvaI	CCWGG	2 cut(s)	83, 155
MvnI	CGCG	7 cut(s)	199, 201, 203, 262, 270, 571, 1562
NciI	CCSGG	5 cut(s)	150, 354, 355, 1037, 2079
NcoI	CCATGG	2 cut(s)	399, 1230
NdeI	CATATG	1 cut(s)	1423
NdeII	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
NlaIV	GGNNCC	9 cut(s)	97, 139, 350, 417, 474, 2007, 2300, 2334, 2608
NmuCI	GTSAC	4 cut(s)	409, 1322, 1873, 2715
NsbI	TGCGCA	1 cut(s)	2634
NspI	RCATGY	7 cut(s)	268, 1081, 1099, 1352, 1400, 1622, 1754
OliI	CACNNNNGTG	1 cut(s)	1316
PaeI	GCATGC	3 cut(s)	268, 1352, 1622
PauI	GCGCGC	4 cut(s)	199, 201, 260, 268
PciI	ACATGT	1 cut(s)	1396
PciSI	GCTCTTC	2 cut(s)	128, 1065
PcsI	WCGNNNNNNNCGW	3 cut(s)	63, 123, 1159
PctI	GAATGC	2 cut(s)	400, 698
PdmI	GAANNNNTTC	2 cut(s)	1142, 2091
PfeI	GAWTC	6 cut(s)	542, 1148, 1222, 1600, 1880, 2551
PflFI	GACNNNGTC	1 cut(s)	2466
PfoI	TCCNGGA	2 cut(s)	81, 1035
PleI	GAGTC	5 cut(s)	199, 722, 1258, 1577, 1917
PmaCI	CACGTG	1 cut(s)	367
PmlI	CACGTG	1 cut(s)	367
PpsI	GAGTC	5 cut(s)	199, 722, 1258, 1577, 1917
Ppu21I	YACGTR	1 cut(s)	367
PpuMI	RGGWCCY	1 cut(s)	2006
PscI	ACATGT	1 cut(s)	1396
PshAI	GACNNNNGTC	1 cut(s)	77
Psp124BI	GAGCTC	1 cut(s)	123
Psp5II	RGGWCCY	1 cut(s)	2006
Psp6I	CCWGG	2 cut(s)	81, 153
PspCI	CACGTG	1 cut(s)	367
PspFI	CCCAGC	1 cut(s)	1785
PspGI	CCWGG	2 cut(s)	81, 153
PspN4I	GGNNCC	9 cut(s)	97, 139, 350, 417, 474, 2007, 2300, 2334, 2608
PspOMI	GGGCCC	1 cut(s)	2332
PspPPI	RGGWCCY	1 cut(s)	2006
PstNI	CAGNNNCTG	2 cut(s)	379, 2222
PsuI	RGATCY	1 cut(s)	2764
PsyI	GACNNNGTC	1 cut(s)	2466
PteI	GCGCGC	4 cut(s)	199, 201, 260, 268
PvuII	CAGCTG	2 cut(s)	800, 2597
RsaI	GTAC	6 cut(s)	69, 212, 1173, 1657, 1693, 2350
RsaNI	GTAC	6 cut(s)	68, 211, 1172, 1656, 1692, 2349
RseI	CAYNNNNRTG	4 cut(s)	404, 564, 882, 1316
Rsr2I	CGGWCCG	1 cut(s)	146
RsrII	CGGWCCG	1 cut(s)	146
SacI	GAGCTC	1 cut(s)	123
SacII	CCGCGG	1 cut(s)	1563
SapI	GCTCTTC	2 cut(s)	128, 1065
SaqAI	TTAA	8 cut(s)	486, 908, 1545, 1719, 1793, 2240, 2292, 2517
Sau3AI	GATC	9 cut(s)	132, 309, 664, 1381, 2281, 2384, 2591, 2599, 2764
SchI	GAGTC	5 cut(s)	200, 722, 1259, 1578, 1917
ScrFI	CCNGG	7 cut(s)	83, 150, 155, 354, 355, 1037, 2079
SduI	GDGCHC	6 cut(s)	123, 366, 477, 1060, 1313, 2336
SfaNI	GCATC	5 cut(s)	313, 800, 963, 1426, 2261
SfcI	CTRYAG	3 cut(s)	2133, 2404, 2673
SfiI	GGCCNNNNNGGCC	1 cut(s)	2305
Sfr303I	CCGCGG	1 cut(s)	1563
SgrBI	CCGCGG	1 cut(s)	1563
SinI	GGWCC	8 cut(s)	79, 95, 112, 138, 146, 1982, 2006, 2607
SmaI	CCCGGG	1 cut(s)	355
SmiMI	CAYNNNNRTG	4 cut(s)	404, 564, 882, 1316
SmlI	CTYRAG	3 cut(s)	907, 1544, 1718
SmoI	CTYRAG	3 cut(s)	907, 1544, 1718
SpeI	ACTAGT	1 cut(s)	2141
SphI	GCATGC	3 cut(s)	268, 1352, 1622
SspMI	CTAG	7 cut(s)	780, 1047, 1502, 1589, 2142, 2310, 2706
SstI	GAGCTC	1 cut(s)	123
StyD4I	CCNGG	7 cut(s)	81, 148, 153, 352, 353, 1035, 2077
StyI	CCWWGG	5 cut(s)	177, 282, 399, 477, 1230
TaaI	ACNGT	8 cut(s)	67, 79, 220, 1555, 1873, 2137, 2376, 2393
TaiI	ACGT	2 cut(s)	369, 2280
TaqI	TCGA	8 cut(s)	57, 126, 316, 1071, 1146, 1417, 1611, 2680
TatI	WGTACW	2 cut(s)	1655, 1691
TauI	GCSGC	6 cut(s)	185, 290, 329, 1180, 1183, 1562
TfiI	GAWTC	6 cut(s)	542, 1148, 1222, 1600, 1880, 2551
Tru1I	TTAA	8 cut(s)	486, 908, 1545, 1719, 1793, 2240, 2292, 2517
Tru9I	TTAA	8 cut(s)	486, 908, 1545, 1719, 1793, 2240, 2292, 2517
TscAI	CASTG	5 cut(s)	759, 769, 928, 2386, 2718
TseFI	GTSAC	4 cut(s)	409, 1322, 1873, 2715
TseI	GCWGC	6 cut(s)	47, 736, 1723, 1762, 1970, 2020
Tsp45I	GTSAC	4 cut(s)	409, 1322, 1873, 2715
TspGWI	ACGGA	3 cut(s)	428, 1892, 1935
TspMI	CCCGGG	1 cut(s)	353
TspRI	CASTG	5 cut(s)	759, 769, 928, 2386, 2718
Tth111I	GACNNNGTC	1 cut(s)	2466
Vha464I	CTTAAG	3 cut(s)	907, 1544, 1718
VneI	GTGCAC	1 cut(s)	362
VpaK11BI	GGWCC	8 cut(s)	79, 95, 112, 138, 146, 1982, 2006, 2607
XapI	RAATTY	7 cut(s)	1109, 1201, 1736, 1887, 2040, 2050, 2116
XceI	RCATGY	7 cut(s)	268, 1081, 1099, 1352, 1400, 1622, 1754
XmaI	CCCGGG	1 cut(s)	353
XmiI	GTMKAC	1 cut(s)	194
XmnI	GAANNNNTTC	2 cut(s)	1142, 2091
XspI	CTAG	7 cut(s)	780, 1047, 1502, 1589, 2142, 2310, 2706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.