Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010358

Physical Location & Seq

Genomic Coordinates Forward (+)

68128326 .. 68133737

Gene Structure 5412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0500000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGCCCCCGCGGACCAGAAGAATGCCATTTCCGGATGTGGTGATCGAGAGAGACACCGACTCCGAGCAAAGCTCATCGGAAGAAGAAGAAGAAGACGAACCGGCGGTGTTGGTGGAGAGCGAAAATGAAGAGAAAGCTGACGAGGCCAAGAAGAAAGGAAAAGCGCCCATTACTATTTCTCTCAAGAAAGTTTGCAAGGTTTGTAAGAAGCCTGGACATGAAGCTGGATTTAAAGGAGCTACTTATATTGATTGCCCAATGAAACCTTGCTTTCTTTGCAAAATGCCTGGCCATACTACAGTGACATGCCCGCATCGAGTAGCTACCGAGTATGGGGTCATCCCAGCAAAACGTAAAAATACCCGAAATGGATTGGAATATGCGTTCGAACGACAGATTAGACCTCGGATTCCTCCGATCAAGCCAGCATATGTGATCCCTGATCAAGTAAGTTGTGCGGTTATCAGATATCATAGTAGACGGGTAACTTGCTTGGAATTCCATCCAACAAACAATAATATCCTTTTATCAGGAGATAAGAAAGGACAGCTTGGAGTCTGGGATTTTCGCAAAGTATATGAGAAGGTTGTTTATGGAAATGTACACTCATGTATACTAAACAATATGAAGTTTAGCCCTGCAAGTGATGGTACAGTATATGCTGCATCCTCAGATGGAACCGTTAGCTGCACTGATGTCGAGACTGGAATTGCATTGTCTCTGATGAATCTCAACCCTGATGGTTGGCAGGGTCCAAGCACCTGGAGAATGCTGTATGGCATGGATATCAATGCAGAGAAAGGTGCCGTGCTTGTTGCTGATAACTTTGGTTTCCTCTACTTGGTTGATACTCGCTCAAATAACAGAACAGGGAAACCAATTTTGATCCATAAGAAAGGTAGCAAAGTTGTTGGACTTCACTGCAATCCTGTTCAACCAGACCTTCTCTTGAGTTGTGGAAATGATCATTTTGCTCGCATATGGGACATTCGTCGAATTGAAGATGGTTCCTCCATTTATGACCTTGCACACAGCCGTGTTGTTAACTCTGCGTATTTTTCTCCAGTATCTGGCAGTAAAATTCTTACCACTTCACAGGACAACCGTCTTTGTATATGGGATTCCATATTTGGCAGTATGGATTCCCCAAGCCGAGAGATTGTACACAGTCATGATTTTAATCGGTATCTGACTCCTTTCCGAGCCGAATGGGATCCAAAGGACCCGTCAGAGTCACTTGCAGTTATTGGTCGTTATATAAGTGAAAACTATAATGGAGCTGCTCTGCATCCCATTGATTTCATAGACATCAGTACAGGGCAACTAGTTGCTGAGATCATGGATCCAAACATTACTACAATCACTCCAGTGAACAAGCTACATCCACGTGATGATGTTTTGGCATCTGGTAGTTCAAGGTCACTTTTCATTTGGCGGCCAAAGGAAAAGTCTGAGCCTGTGGAACAGATGGATGTGGGGAAGATTTTTGTTTGCGACAGAGATGATAAAAAGAGAAGAAAACGGAAGTTTGGGGGTGAAAGTGATGATTCTGATGATGACAGGTCCATCCCCAAGAGCAAGAGGTTTAAGTCCCAAAAGAAATCTCAGTCCAAGTCAAGTCTATCTGTTAAGGTCAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002090 GO:0002092 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0006810 GO:0006897 GO:0006898 GO:0007034 GO:0007041 GO:0007154 GO:0007165 GO:0007166 GO:0007267 GO:0008150 GO:0008152 GO:0008333 GO:0009893 GO:0009966 GO:0009968 GO:0009987 GO:0010604 GO:0010646 GO:0010648 GO:0016055 GO:0016192 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0030100 GO:0030111 GO:0030178 GO:0031323 GO:0031325 GO:0031623 GO:0032879 GO:0043112 GO:0043170 GO:0044237 GO:0044260 GO:0045807 GO:0046907 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060070 GO:0060255 GO:0060627 GO:0060828 GO:0065007 GO:0071704 GO:0090090 GO:0098657 GO:0198738 GO:1905114 GO:2000286 GO:2000369 GO:2000370

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Pkinase

Protein Analysis

547

Amino Acids

61.43

Weight (kDa)

8.67

Isoelectric Point (pI)

47.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	155 - 238	1.5e-06	THOC3 beta-propeller domain
Beta-prop_EIPR1	PF23609	158 - 228	8.4e-06	EIPR1 beta-propeller
WD40_CDC20-Fz	PF24807	217 - 376	9.6e-08	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	270 - 373	7.4e-07	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	301 - 375	2.4e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22870 AT1G22870 AT1G22870 AT1G22870
fragaria_vesca	FvH4_2g00710
malus_domestica	MD05G1002800.v1.1 MD10G1003500.v1.1
prunus_persica	Prupe.8G006100_v2.0.a1
pyrus_communis	pycom05g00260 pycom10g00300
rosa_chinensis	RchiOBHm_Chr6g0251091
rosa_laevigata	RLG00000015485
rosa_multiflora	Rmu_sc0002219.1_g000007 Rmu_sc0024842.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217050
rosa_rugosa	Rorug05G0500000
rosa_samantha	Rh6AG008200 Rh6BG002900 Rh6CG005700 Rh6DG005900
rosa_wichuraiana	Rw6G000910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	803
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccI	GTMKAC	2 cut(s)	478, 613
AccII	CGCG	1 cut(s)	10
AccIII	TCCGGA	1 cut(s)	31
AciI	CCGC	6 cut(s)	8, 10, 104, 311, 458, 1435
AclWI	GGATC	6 cut(s)	430, 880, 1208, 1221, 1337, 1350
AcoI	YGGCCR	2 cut(s)	289, 1436
AcsI	RAATTY	2 cut(s)	497, 1080
AcvI	CACGTG	1 cut(s)	1388
AfaI	GTAC	4 cut(s)	603, 652, 1164, 1315
AfiI	CCNNNNNNNGG	3 cut(s)	333, 841, 1070
AgsI	TTSAA	3 cut(s)	935, 1001, 1416
AhlI	ACTAGT	1 cut(s)	1324
AjnI	CCWGG	3 cut(s)	211, 286, 761
AleI	CACNNNNGTG	2 cut(s)	1035, 1367
AloI	GAACNNNNNNTCC	2 cut(s)	368, 400
AluBI	AGCT	9 cut(s)	72, 137, 224, 239, 323, 550, 687, 1280, 1378
AluI	AGCT	9 cut(s)	72, 137, 224, 239, 323, 550, 687, 1280, 1378
Alw26I	GTCTC	3 cut(s)	45, 695, 723
AlwI	GGATC	6 cut(s)	430, 880, 1208, 1221, 1337, 1350
AlwNI	CAGNNNCTG	2 cut(s)	1070, 1641
Aor13HI	TCCGGA	1 cut(s)	31
AoxI	GGCC	3 cut(s)	144, 289, 1436
ApeKI	GCWGC	3 cut(s)	662, 687, 1280
ApoI	RAATTY	2 cut(s)	497, 1080
ArsI	GACNNNNNNTTYG	4 cut(s)	1211, 1243, 1433, 1465
AspLEI	GCGC	1 cut(s)	166
AspS9I	GGNCC	4 cut(s)	12, 752, 1222, 1563
AsuHPI	GGTGA	2 cut(s)	52, 1547
AsuII	TTCGAA	1 cut(s)	387
AvaII	GGWCC	4 cut(s)	12, 752, 1222, 1563
BalI	TGGCCA	1 cut(s)	291
BamHI	GGATCC	2 cut(s)	1213, 1342
BanI	GGYRCC	1 cut(s)	803
BbrPI	CACGTG	1 cut(s)	1388
BbsI	GAAGAC	1 cut(s)	99
BbvI	GCAGC	3 cut(s)	649, 674, 1267
BccI	CCATC	7 cut(s)	510, 641, 668, 734, 998, 1462, 1574
BceAI	ACGGC	2 cut(s)	791, 1020
BcgI	CGANNNNNNTGC	2 cut(s)	679, 713
BciT130I	CCWGG	3 cut(s)	213, 288, 763
BclI	TGATCA	2 cut(s)	442, 964
BcoDI	GTCTC	3 cut(s)	45, 695, 723
BcuI	ACTAGT	1 cut(s)	1324
BfaI	CTAG	1 cut(s)	1325
BfmI	CTRYAG	1 cut(s)	297
BfoI	RGCGCY	1 cut(s)	167
BisI	GCNGC	4 cut(s)	663, 688, 1281, 1436
BlsI	GCNGC	4 cut(s)	664, 689, 1282, 1437
Bme1390I	CCNGG	3 cut(s)	213, 288, 763
Bme18I	GGWCC	4 cut(s)	12, 752, 1222, 1563
BmgT120I	GGNCC	4 cut(s)	12, 752, 1222, 1563
BmiI	GGNNCC	7 cut(s)	679, 753, 805, 1009, 1215, 1224, 1344
BmrFI	CCNGG	3 cut(s)	213, 288, 763
BmsI	GCATC	4 cut(s)	322, 674, 1297, 1412
BoxI	GACNNNNGTC	2 cut(s)	990, 1104
BpiI	GAAGAC	1 cut(s)	99
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	3 cut(s)	784, 1047, 1350
Bpu14I	TTCGAA	1 cut(s)	387
BpuEI	CTTGAG	2 cut(s)	167, 970
BsaAI	YACGTR	1 cut(s)	1388
BsaBI	GATNNNNATC	1 cut(s)	1179
BsaJI	CCNNGG	2 cut(s)	8, 404
BsaWI	WCCGGW	1 cut(s)	31
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 1348, 1378
Bsc4I	CCNNNNNNNGG	3 cut(s)	333, 841, 1070
Bse118I	RCCGGY	1 cut(s)	100
Bse1I	ACTGG	3 cut(s)	709, 1064, 1367
Bse8I	GATNNNNATC	1 cut(s)	1179
BseAI	TCCGGA	1 cut(s)	31
BseBI	CCWGG	3 cut(s)	213, 288, 763
BseDI	CCNNGG	2 cut(s)	8, 404
BseGI	GGATG	8 cut(s)	40, 339, 502, 665, 1288, 1381, 1477, 1566
BseJI	GATNNNNATC	1 cut(s)	1179
BseLI	CCNNNNNNNGG	3 cut(s)	333, 841, 1070
BseMII	CTCAG	4 cut(s)	684, 1323, 1443, 1619
BseNI	ACTGG	3 cut(s)	709, 1064, 1367
BseXI	GCAGC	3 cut(s)	649, 674, 1267
BseYI	CCCAGC	1 cut(s)	343
BsgI	GTGCAG	1 cut(s)	673
Bsh1236I	CGCG	1 cut(s)	10
BshFI	GGCC	3 cut(s)	146, 291, 1438
BshNI	GGYRCC	1 cut(s)	803
BsiSI	CCGG	2 cut(s)	32, 101
BslFI	GGGAC	2 cut(s)	998, 1576
BslI	CCNNNNNNNGG	3 cut(s)	333, 841, 1070
BsmAI	GTCTC	3 cut(s)	45, 695, 723
BsmFI	GGGAC	2 cut(s)	998, 1576
BsmI	GAATGC	2 cut(s)	27, 774
BsnI	GGCC	3 cut(s)	146, 291, 1438
Bsp119I	TTCGAA	1 cut(s)	387
Bsp13I	TCCGGA	1 cut(s)	31
Bsp1407I	TGTACA	2 cut(s)	601, 1162
Bsp143I	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
BspACI	CCGC	6 cut(s)	8, 10, 104, 311, 458, 1435
BspANI	GGCC	3 cut(s)	146, 291, 1438
BspCNI	CTCAG	4 cut(s)	683, 1324, 1444, 1618
BspEI	TCCGGA	1 cut(s)	31
BspFNI	CGCG	1 cut(s)	10
BspHI	TCATGA	1 cut(s)	1171
BspLI	GGNNCC	7 cut(s)	679, 753, 805, 1009, 1215, 1224, 1344
BspPI	GGATC	6 cut(s)	430, 880, 1208, 1221, 1337, 1350
BspT104I	TTCGAA	1 cut(s)	387
BspT107I	GGYRCC	1 cut(s)	803
BsrFI	RCCGGY	1 cut(s)	100
BsrGI	TGTACA	2 cut(s)	601, 1162
BsrI	ACTGG	3 cut(s)	709, 1064, 1367
BssAI	RCCGGY	1 cut(s)	100
BssECI	CCNNGG	2 cut(s)	8, 404
BssMI	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
BssNAI	GTATAC	1 cut(s)	614
Bst1107I	GTATAC	1 cut(s)	614
Bst2UI	CCWGG	3 cut(s)	213, 288, 763
Bst4CI	ACNGT	5 cut(s)	301, 655, 682, 1106, 1169
Bst6I	CTCTTC	1 cut(s)	123
BstAUI	TGTACA	2 cut(s)	601, 1162
BstBAI	YACGTR	1 cut(s)	1388
BstBI	TTCGAA	1 cut(s)	387
BstC8I	GCNNGC	3 cut(s)	311, 426, 976
BstDEI	CTNAG	4 cut(s)	670, 1332, 1452, 1605
BstDSI	CCRYGG	1 cut(s)	8
BstF5I	GGATG	8 cut(s)	40, 339, 502, 665, 1288, 1381, 1477, 1566
BstFNI	CGCG	1 cut(s)	10
BstH2I	RGCGCY	1 cut(s)	167
BstHHI	GCGC	1 cut(s)	166
BstKTI	GATC	9 cut(s)	45, 420, 438, 445, 888, 967, 1216, 1338, 1345
BstMAI	GTCTC	3 cut(s)	45, 695, 723
BstMBI	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
BstMWI	GCNNNNNNNGC	2 cut(s)	143, 276
BstNI	CCWGG	3 cut(s)	213, 288, 763
BstNSI	RCATGY	1 cut(s)	309
BstPAI	GACNNNNGTC	2 cut(s)	990, 1104
BstSCI	CCNGG	3 cut(s)	211, 286, 761
BstSFI	CTRYAG	1 cut(s)	297
BstUI	CGCG	1 cut(s)	10
BstV1I	GCAGC	3 cut(s)	649, 674, 1267
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	2 cut(s)	1213, 1342
BstXI	CCANNNNNNTGG	1 cut(s)	762
BstYI	RGATCY	2 cut(s)	1213, 1342
BstZ17I	GTATAC	1 cut(s)	614
BsuRI	GGCC	3 cut(s)	146, 291, 1438
BtgI	CCRYGG	1 cut(s)	8
BtsCI	GGATG	8 cut(s)	40, 339, 502, 665, 1288, 1381, 1477, 1566
BtsI	GCAGTG	1 cut(s)	919
BtsIMutI	CAGTG	4 cut(s)	306, 690, 919, 1374
Cac8I	GCNNGC	3 cut(s)	311, 426, 976
CaiI	CAGNNNCTG	2 cut(s)	1070, 1641
CciI	TCATGA	1 cut(s)	1171
CfoI	GCGC	1 cut(s)	166
Cfr10I	RCCGGY	1 cut(s)	100
Cfr13I	GGNCC	4 cut(s)	12, 752, 1222, 1563
Cfr42I	CCGCGG	1 cut(s)	11
Csp6I	GTAC	4 cut(s)	602, 651, 1163, 1314
CviAII	CATG	6 cut(s)	218, 306, 609, 781, 1172, 1339
CviQI	GTAC	4 cut(s)	602, 651, 1163, 1314
DdeI	CTNAG	4 cut(s)	670, 1332, 1452, 1605
DpnI	GATC	9 cut(s)	44, 419, 437, 444, 887, 966, 1215, 1337, 1344
DpnII	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
DraI	TTTAAA	1 cut(s)	232
EaeI	YGGCCR	2 cut(s)	289, 1436
Eam1104I	CTCTTC	1 cut(s)	123
EarI	CTCTTC	1 cut(s)	123
Eco32I	GATATC	2 cut(s)	470, 787
Eco47I	GGWCC	4 cut(s)	12, 752, 1222, 1563
Eco72I	CACGTG	1 cut(s)	1388
EcoO109I	RGGNCCY	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	497
EcoRII	CCWGG	3 cut(s)	211, 286, 761
EcoRV	GATATC	2 cut(s)	470, 787
FaeI	CATG	6 cut(s)	221, 309, 612, 784, 1175, 1342
FalI	AAGNNNNNCTT	2 cut(s)	534, 566
FaqI	GGGAC	2 cut(s)	998, 1576
FatI	CATG	6 cut(s)	217, 305, 608, 780, 1171, 1338
FauI	CCCGC	2 cut(s)	15, 318
FauNDI	CATATG	2 cut(s)	430, 980
FbaI	TGATCA	2 cut(s)	442, 964
FblI	GTMKAC	2 cut(s)	478, 613
Fnu4HI	GCNGC	4 cut(s)	663, 688, 1281, 1436
FokI	GGATG	8 cut(s)	47, 326, 489, 652, 1275, 1368, 1484, 1553
Fsp4HI	GCNGC	4 cut(s)	663, 688, 1281, 1436
FspBI	CTAG	1 cut(s)	1325
GlaI	GCGC	1 cut(s)	165
GluI	GCNGC	4 cut(s)	663, 688, 1281, 1436
GsaI	CCCAGC	1 cut(s)	347
GsuI	CTGGAG	3 cut(s)	784, 1047, 1350
HaeII	RGCGCY	1 cut(s)	167
HaeIII	GGCC	3 cut(s)	146, 291, 1438
HapII	CCGG	2 cut(s)	32, 101
HhaI	GCGC	1 cut(s)	166
Hin1II	CATG	6 cut(s)	221, 309, 612, 784, 1175, 1342
Hin6I	GCGC	1 cut(s)	164
HinP1I	GCGC	1 cut(s)	164
HincII	GTYRAC	1 cut(s)	1045
HindII	GTYRAC	1 cut(s)	1045
HinfI	GANTC	9 cut(s)	59, 409, 555, 727, 1121, 1142, 1192, 1232, 1547
HpaI	GTTAAC	1 cut(s)	1045
HpaII	CCGG	2 cut(s)	32, 101
HphI	GGTGA	2 cut(s)	52, 1547
Hpy166II	GTNNAC	6 cut(s)	479, 604, 614, 1045, 1165, 1372
Hpy188III	TCNNGA	7 cut(s)	32, 46, 184, 531, 700, 949, 1172
Hpy8I	GTNNAC	6 cut(s)	479, 604, 614, 1045, 1165, 1372
Hpy99I	CGWCG	1 cut(s)	996
HpyAV	CCTTC	2 cut(s)	577, 953
HpyCH4III	ACNGT	5 cut(s)	301, 655, 682, 1106, 1169
HpyCH4IV	ACGT	2 cut(s)	352, 1387
HpyF10VI	GCNNNNNNNGC	2 cut(s)	143, 276
HpyF3I	CTNAG	4 cut(s)	670, 1332, 1452, 1605
HpySE526I	ACGT	2 cut(s)	352, 1387
Hsp92II	CATG	6 cut(s)	221, 309, 612, 784, 1175, 1342
HspAI	GCGC	1 cut(s)	164
Kpn2I	TCCGGA	1 cut(s)	31
Ksp22I	TGATCA	2 cut(s)	442, 964
KspAI	GTTAAC	1 cut(s)	1045
KspI	CCGCGG	1 cut(s)	11
Kzo9I	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
LmnI	GCTCC	2 cut(s)	236, 1277
Lsp1109I	GCAGC	3 cut(s)	649, 674, 1267
LweI	GCATC	4 cut(s)	322, 674, 1297, 1412
MaeI	CTAG	1 cut(s)	1325
MaeII	ACGT	2 cut(s)	352, 1387
MaeIII	GTNAC	4 cut(s)	301, 484, 1233, 1419
MalI	GATC	9 cut(s)	44, 419, 437, 444, 887, 966, 1215, 1337, 1344
MboI	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
MflI	RGATCY	2 cut(s)	1213, 1342
MlsI	TGGCCA	1 cut(s)	291
MluCI	AATT	5 cut(s)	497, 708, 879, 996, 1080
MluNI	TGGCCA	1 cut(s)	291
MlyI	GAGTC	4 cut(s)	53, 564, 1186, 1241
MmeI	TCCRAC	2 cut(s)	530, 892
MnlI	CCTC	7 cut(s)	136, 414, 423, 679, 845, 1021, 1575
Mox20I	TGGCCA	1 cut(s)	291
MroI	TCCGGA	1 cut(s)	31
MscI	TGGCCA	1 cut(s)	291
MseI	TTAA	5 cut(s)	231, 1044, 1179, 1587, 1629
MslI	CAYNNNNRTG	4 cut(s)	1035, 1170, 1367, 1386
Msp20I	TGGCCA	1 cut(s)	291
MspA1I	CMGCKG	1 cut(s)	10
MspI	CCGG	2 cut(s)	32, 101
MspR9I	CCNGG	3 cut(s)	213, 288, 763
Mva1269I	GAATGC	2 cut(s)	27, 774
MvaI	CCWGG	3 cut(s)	213, 288, 763
MvnI	CGCG	1 cut(s)	10
MwoI	GCNNNNNNNGC	2 cut(s)	143, 276
NdeI	CATATG	2 cut(s)	430, 980
NdeII	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
NlaIII	CATG	6 cut(s)	221, 309, 612, 784, 1175, 1342
NlaIV	GGNNCC	7 cut(s)	679, 753, 805, 1009, 1215, 1224, 1344
NmeAIII	GCCGAG	1 cut(s)	1178
NmuCI	GTSAC	3 cut(s)	301, 1233, 1419
NspI	RCATGY	1 cut(s)	309
NspV	TTCGAA	1 cut(s)	387
OliI	CACNNNNGTG	2 cut(s)	1035, 1367
PagI	TCATGA	1 cut(s)	1171
PctI	GAATGC	2 cut(s)	27, 774
PfeI	GAWTC	5 cut(s)	409, 727, 1121, 1142, 1547
PflMI	CCANNNNNTGG	1 cut(s)	1070
PkrI	GCNGC	4 cut(s)	664, 689, 1282, 1437
PleI	GAGTC	4 cut(s)	53, 563, 1186, 1240
PmaCI	CACGTG	1 cut(s)	1388
PmlI	CACGTG	1 cut(s)	1388
PpsI	GAGTC	4 cut(s)	53, 563, 1186, 1240
Ppu21I	YACGTR	1 cut(s)	1388
PpuMI	RGGWCCY	1 cut(s)	1222
PshAI	GACNNNNGTC	2 cut(s)	990, 1104
Psp5II	RGGWCCY	1 cut(s)	1222
Psp6I	CCWGG	3 cut(s)	211, 286, 761
PspCI	CACGTG	1 cut(s)	1388
PspFI	CCCAGC	1 cut(s)	343
PspGI	CCWGG	3 cut(s)	211, 286, 761
PspN4I	GGNNCC	7 cut(s)	679, 753, 805, 1009, 1215, 1224, 1344
PspPI	GGNCC	4 cut(s)	12, 752, 1222, 1563
PspPPI	RGGWCCY	1 cut(s)	1222
PstNI	CAGNNNCTG	2 cut(s)	1070, 1641
PsuI	RGATCY	2 cut(s)	1213, 1342
RsaI	GTAC	4 cut(s)	603, 652, 1164, 1315
RsaNI	GTAC	4 cut(s)	602, 651, 1163, 1314
RseI	CAYNNNNRTG	4 cut(s)	1035, 1170, 1367, 1386
SacII	CCGCGG	1 cut(s)	11
SaqAI	TTAA	5 cut(s)	231, 1044, 1179, 1587, 1629
SatI	GCNGC	4 cut(s)	663, 688, 1281, 1436
Sau3AI	GATC	9 cut(s)	42, 417, 435, 442, 885, 964, 1213, 1335, 1342
Sau96I	GGNCC	4 cut(s)	12, 752, 1222, 1563
SchI	GAGTC	4 cut(s)	53, 564, 1186, 1241
ScrFI	CCNGG	3 cut(s)	213, 288, 763
SfaNI	GCATC	4 cut(s)	322, 674, 1297, 1412
SfcI	CTRYAG	1 cut(s)	297
Sfr303I	CCGCGG	1 cut(s)	11
SfuI	TTCGAA	1 cut(s)	387
SgrBI	CCGCGG	1 cut(s)	11
SinI	GGWCC	4 cut(s)	12, 752, 1222, 1563
SmiMI	CAYNNNNRTG	4 cut(s)	1035, 1170, 1367, 1386
SmlI	CTYRAG	2 cut(s)	182, 949
SmoI	CTYRAG	2 cut(s)	182, 949
SpeI	ACTAGT	1 cut(s)	1324
Sse9I	AATT	5 cut(s)	497, 708, 879, 996, 1080
SsiI	CCGC	6 cut(s)	8, 10, 104, 311, 458, 1435
SspMI	CTAG	1 cut(s)	1325
StyD4I	CCNGG	3 cut(s)	211, 286, 761
TaaI	ACNGT	5 cut(s)	301, 655, 682, 1106, 1169
TaiI	ACGT	2 cut(s)	355, 1390
TaqI	TCGA	5 cut(s)	45, 316, 387, 699, 994
TasI	AATT	5 cut(s)	497, 708, 879, 996, 1080
TatI	WGTACW	3 cut(s)	601, 1162, 1313
TauI	GCSGC	1 cut(s)	1438
TfiI	GAWTC	5 cut(s)	409, 727, 1121, 1142, 1547
Tru1I	TTAA	5 cut(s)	231, 1044, 1179, 1587, 1629
Tru9I	TTAA	5 cut(s)	231, 1044, 1179, 1587, 1629
TscAI	CASTG	4 cut(s)	306, 697, 926, 1374
TseFI	GTSAC	3 cut(s)	301, 1233, 1419
TseI	GCWGC	3 cut(s)	662, 687, 1280
Tsp45I	GTSAC	3 cut(s)	301, 1233, 1419
TspDTI	ATGAA	7 cut(s)	141, 234, 275, 641, 740, 1291, 1417
TspGWI	ACGGA	1 cut(s)	1537
TspRI	CASTG	4 cut(s)	306, 697, 926, 1374
Van91I	CCANNNNNTGG	1 cut(s)	1070
VpaK11BI	GGWCC	4 cut(s)	12, 752, 1222, 1563
XapI	RAATTY	2 cut(s)	497, 1080
XceI	RCATGY	1 cut(s)	309
XmiI	GTMKAC	2 cut(s)	478, 613
XspI	CTAG	1 cut(s)	1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.