RchiOBHm_Chr6g0251091

SCY1-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
6440511 .. 6451770
11260 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22510

Sequence Viewer

Length: 2787 bp
ATGTCTCTGAACATGAAGACCCTACAGCAAGCCCTGGCCAAGGCCGGCGCGGTCATCGAGAAGACGGTACAGACGACGGTCCAGGAAGTCGCCGGGCCCAAGCCTCTTCAGGACTACGAGCTCTTCGACCAGATCGGCTCCGCCGGACCCGCCCTCGTCTGGAAACTCTACTCCGCCAAGGCCGCGCGCGGAGGCCAACATCAGTATCCCACTGTCTGCGTCTGGGTGCTGGATAAGAAGGCTCTCTCGGAGGCGCGTGTGCGGGCCGGGCTGTCCAAGGCGGCGGAGGATGCGTTTTTGGATATCATTAGGGCCGATGCGGCGAGGCTGGTGCGGCTGAGGCACCCCGGGGTGGTGCACGTGGTGCAGGCTTTAGATGAGAACAAGAATGCCATGGCGATGGTGACGGAGCCGTTGTTTGCGTCTGTGGCAAATGCAGTTGGGAATGTGGAGAATATGGTCAAGGTTCCGAAGGAGCTTAAAGGAATGGAAATGGGTTTGTTGGAAGTGAAGCATGGTTTGCTCCAGATAGCTGAGTCCTTGGACTTTCTCCATAACAATGCGCATCTTATTCATCGAGCTATATCACCCGAGAATGTGTTTATTACAGCAAGTGGAGCGTGGAAGCTTGGTGGATTTGGTTTTGCAATCTCAACAGATCAGGCCTCAGGCAATATGAATGTTCCGGAATTTCATTATGCAGAGTATGATGTTGAGGACTCTGTACTTCCACTTCAGCCATCACTGAATTACACTGCTCCTGAACTTGCTAGGAGTAAAGCATCTTCTGCCGGATGTTCTTCTGATATTTTCAGCTTTGGATGTCTTGCCTACCACTTGATTGCACGCAAACCTTTGTTTGACTGCCACAATAATGTCAAGATGTACATGAATACCTTAAGTTATTTATCTAGTGAAGCCTTCTCCTCTATTCCTCCTGAGTTAGTTCCTGACTTGCAAAGGATGATCTCTACAAATGAGTCTTTCAGGCCATCAGCAATTGATTTTACAGGTTCTCCATTTTTCCGGGATGACACTAGGTTGCGTGCTCTTCGTTTTCTCGACCACATGCTCGAAAGGGATAACATGCAGAAATCTGAGTTCCTAAAAGCATTGTCTGATATGTGGAAAGATTTTGATGCTCGTGTATTGCGCTATAAGGTACTGCCTCCTCTTTGTGCAGAACTGAGGAATTTGGTAATGCAACCGATGATTCTGCCTATGGTTCTCATGATTGCTGAGTCTCAGGATAAAGATGATTTCGAGCTATCAACATTGCCAGCTCTTGTTCCTGTCCTGAGCACGGCTGTGGGTGACACATTGCTGCTGCTTTTGAAGCATACAGATCTCATAATCAACAAGACTATTCCAGATCACTTGATATTACATGTCCTTCCCATGATTGTTCGAGCTTATGAAGAGAATGATGCCCGCATACAGGAGGAGGTTTTGAAAAGATCTGCTTCCCTTGCTAAGAAACTTGATCTTCAGCTAGTGAAACAAGCTATTTTGCCTCGTGTTCATGGTTTAGCTCTGAAAACAACCGTTGCTGCGGTGAGAGTCAATGCTTTGCTTTGTTTAGGAGAACTGATTCACACACTTGATAAGCGTGCTATTCTAGATATTTTGCAAACAATTCAGCGATGTACAGCCGTTGACCGCTCTGCTCCTACTCTTATGTGTACTCTTGGCGTGTCAAACTCGATCCTTAAGAAGCATGGGGTAGAGTTTGTTGCAGAGCATGTCCTCCCAATAATCATACCACTTCTTACTGCCCAGCAATTAAATGTTCAGCAGTTTGCCAAGTATATGCTTTTTGTCAAGGATATTCTGAGAGGAAAAACGGGGGTTACTGTGACGGATTCTGGAATCCCAGAGGTAAAGCCATCTTTATCTGCCAATGGGCTCCAGTCCCAAGTCCATTCCCAAGTCTCAAGTAACATAAGCGGAAATGTTTCTAGTGCTACAAATAGCCGTCCAGCATGGGACGAAGAATGGGGTCCGATTAGAAAGCAGCCTTCCAATTCCCTCCAGAATTCTACAAATAGTGCTACCCCCAGTAATCCCCTAATGGGTAATGAACCAATTCAAGTAAGCTCCTCACAGCCAAATTCATTCTTACAAACTGCAGTATCGAGTCAGCAAACTGCTGCATCATGTCCCCCGGTTGATATTGAGTGGCCTCCTCGGGCACCATCTGGTGCAACCCCTCAGTTTGATGATGCTGAGAAGAAATCAAATGCAGGAGTGTCACCCACTTCAAGTTTTGATGACATTGATCCTTTTGCCAACTGGCCCCCACGGTCTAGTGGCTCAGTAGGTGGTTCTGGCCCTTCCAGCAATGGGGCAATGGGATTTCCAACGAATATGTACGGTTCCAATTCACTCTCAAGTACATCAAATAGCATGAACTTGAAAAGCAATAGCAATAACAGTTGGACCTTCGACACCCAGAGTTCTATTGAGCAAATAAGACTGAATCAAGGCAATGCAACTTCCAATACTGGTAGTCTGGGTAACTCAGGTTTCAGCTCCCAGGATTCTCTTGGATATATGAAACAGAATCAGGCAATACCAGCTTCAAGTGCTTATACAAATAAAAACTCAGCTGATCTAGGATCAATATTTGCTTCTGCCAAGAATGACCAGACAGCACCTAGACTTGCTCCACCTCCTTCAAGTACTGTGGGTCGAGGAAGAGGAAGAGGGAGGGGTGCTAGTTCAGTCTCTCGGTCCAGCCATGCCAAATCGTCAACTGAACAGCCTCCCCTTTTGGATCTACTATAA

Protein Analysis

928

Amino Acids

100.56

Weight (kDa)

6.86

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 101 - 332 1.7e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 103 - 342 1.3e-20 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010358)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 564
AccB1I GGYRCC 2 cut(s) 342, 2191
AccBSI CCGCTC 1 cut(s) 1662
AccII CGCG 5 cut(s) 50, 185, 187, 189, 256
AccIII TCCGGA 1 cut(s) 685
AclWI GGATC 4 cut(s) 1699, 2273, 2626, 2784
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 4 cut(s) 689, 1192, 2035, 2110
AcuI CTGAAG 3 cut(s) 92, 719, 1472
AcvI CACGTG 1 cut(s) 361
AdeI CACNNNGTG 1 cut(s) 364
AfaI GTAC 9 cut(s) 69, 726, 887, 1164, 1648, 1684, 2372, 2395, 2683
AfiI CCNNNNNNNGG 7 cut(s) 40, 159, 352, 1303, 1438, 2072, 2343
AflII CTTAAG 2 cut(s) 898, 1709
AflIII ACRYGT 1 cut(s) 1387
AgsI TTSAA 7 cut(s) 1336, 1453, 2090, 2262, 2416, 2583, 2679
AjnI CCWGG 3 cut(s) 33, 81, 2535
AleI CACNNNNGTG 1 cut(s) 1307
Alw21I GWGCWC 4 cut(s) 123, 360, 1051, 1304
Alw26I GTCTC 4 cut(s) 9, 1248, 1936, 2731
Alw44I GTGCAC 1 cut(s) 356
AlwI GGATC 4 cut(s) 1699, 2273, 2626, 2784
Ama87I CYCGRG 3 cut(s) 347, 590, 2187
Aor13HI TCCGGA 1 cut(s) 685
ApaI GGGCCC 1 cut(s) 99
ApaLI GTGCAC 1 cut(s) 356
ApeKI GCWGC 5 cut(s) 1324, 1327, 1550, 2014, 2150
ApoI RAATTY 4 cut(s) 689, 1192, 2035, 2110
Asp700I GAANNNNTTC 3 cut(s) 1590, 1954, 2085
AspLEI GCGC 6 cut(s) 50, 187, 189, 256, 565, 1155
AsuC2I CCSGG 6 cut(s) 94, 268, 348, 349, 1028, 2165
AsuHPI GGTGA 5 cut(s) 415, 579, 1325, 1567, 2244
AvaI CYCGRG 3 cut(s) 347, 590, 2187
AvaII GGWCC 5 cut(s) 79, 146, 2000, 2439, 2733
AxyI CCTNAGG 1 cut(s) 667
BaeGI GKGCMC 3 cut(s) 99, 360, 2194
BaeI ACNNNNGTAYC 4 cut(s) 188, 221, 2115, 2148
BalI TGGCCA 1 cut(s) 38
BanI GGYRCC 2 cut(s) 342, 2191
BanII GRGCYC 3 cut(s) 99, 123, 1908
BarI GAAGNNNNNNTAC 4 cut(s) 717, 749, 769, 801
BauI CACGAG 2 cut(s) 1143, 1515
BbrPI CACGTG 1 cut(s) 361
BbsI GAAGAC 2 cut(s) 23, 68
Bbv12I GWGCWC 4 cut(s) 123, 360, 1051, 1304
BbvCI CCTCAGC 1 cut(s) 338
BbvI GCAGC 5 cut(s) 1311, 1314, 1537, 2026, 2137
BccI CCATC 5 cut(s) 394, 748, 1000, 1894, 2203
BceAI ACGGC 4 cut(s) 397, 1320, 1637, 1959
BcgI CGANNNNNNTGC 4 cut(s) 313, 347, 1198, 1232
BciT130I CCWGG 3 cut(s) 35, 83, 2537
BciVI GTATCC 1 cut(s) 216
BcnI CCSGG 6 cut(s) 94, 268, 348, 349, 1028, 2165
BcoDI GTCTC 4 cut(s) 9, 1248, 1936, 2731
BfmI CTRYAG 2 cut(s) 23, 2127
BfrI CTTAAG 2 cut(s) 898, 1709
BfuI GTATCC 1 cut(s) 216
BglI GCCNNNNNGGC 1 cut(s) 320
BglII AGATCT 2 cut(s) 1345, 1457
BisI GCNGC 9 cut(s) 183, 282, 321, 335, 1325, 1328, 1551, 2015, 2151
BlsI GCNGC 9 cut(s) 184, 283, 322, 336, 1326, 1329, 1552, 2016, 2152
BmcAI AGTACT 1 cut(s) 2683
Bme1390I CCNGG 9 cut(s) 35, 83, 94, 268, 348, 349, 1028, 2165, 2537
Bme18I GGWCC 5 cut(s) 79, 146, 2000, 2439, 2733
BmeT110I CYCGRG 3 cut(s) 347, 590, 2187
BmrFI CCNGG 9 cut(s) 35, 83, 94, 268, 348, 349, 1028, 2165, 2537
BmrI ACTGGG 1 cut(s) 2052
BmsI GCATC 8 cut(s) 280, 307, 574, 791, 1129, 1417, 2162, 2212
BmuI ACTGGG 1 cut(s) 2052
BoxI GACNNNNGTC 1 cut(s) 77
BpiI GAAGAC 2 cut(s) 23, 68
BpmI CTGGAG 3 cut(s) 509, 1892, 2015
Bpu10I CCTNAGC 2 cut(s) 338, 1298
BpuEI CTTGAG 2 cut(s) 1918, 2374
BpuMI CCSGG 6 cut(s) 94, 268, 348, 349, 1028, 2165
BsaAI YACGTR 1 cut(s) 361
BsaWI WCCGGW 1 cut(s) 685
BsaXI ACNNNNNCTCC 6 cut(s) 278, 308, 401, 431, 1000, 1030
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 159, 352, 1303, 1438, 2072, 2343
Bse118I RCCGGY 1 cut(s) 44
Bse1I ACTGG 4 cut(s) 1909, 2058, 2297, 2509
Bse21I CCTNAGG 1 cut(s) 667
Bse3DI GCAATG 5 cut(s) 1274, 1319, 2347, 2355, 2494
BseAI TCCGGA 1 cut(s) 685
BseBI CCWGG 3 cut(s) 35, 83, 2537
BseGI GGATG 5 cut(s) 295, 800, 827, 969, 1036
BseLI CCNNNNNNNGG 7 cut(s) 40, 159, 352, 1303, 1438, 2072, 2343
BseMI GCAATG 5 cut(s) 1274, 1319, 2347, 2355, 2494
BseNI ACTGG 4 cut(s) 1909, 2058, 2297, 2509
BsePI GCGCGC 1 cut(s) 185
BseRI GAGGAG 5 cut(s) 916, 1161, 1457, 2089, 2175
BseSI GKGCMC 3 cut(s) 99, 360, 2194
BseXI GCAGC 5 cut(s) 1311, 1314, 1537, 2026, 2137
BseYI CCCAGC 1 cut(s) 1776
BsgI GTGCAG 2 cut(s) 386, 1200
Bsh1236I CGCG 5 cut(s) 50, 185, 187, 189, 256
BshNI GGYRCC 2 cut(s) 342, 2191
BsiHKAI GWGCWC 4 cut(s) 123, 360, 1051, 1304
BsiHKCI CYCGRG 3 cut(s) 347, 590, 2187
BsiSI CCGG 9 cut(s) 45, 93, 144, 267, 348, 686, 792, 1027, 2165
BslFI GGGAC 3 cut(s) 1897, 2000, 2145
BslI CCNNNNNNNGG 7 cut(s) 40, 159, 352, 1303, 1438, 2072, 2343
BsmAI GTCTC 4 cut(s) 9, 1248, 1936, 2731
BsmFI GGGAC 3 cut(s) 1897, 2000, 2145
BsmI GAATGC 1 cut(s) 394
BsoBI CYCGRG 3 cut(s) 347, 590, 2187
Bsp120I GGGCCC 1 cut(s) 95
Bsp1286I GDGCHC 7 cut(s) 99, 123, 360, 1051, 1304, 1908, 2194
Bsp13I TCCGGA 1 cut(s) 685
Bsp1407I TGTACA 2 cut(s) 885, 1646
Bsp19I CCATGG 1 cut(s) 393
BspEI TCCGGA 1 cut(s) 685
BspFNI CGCG 5 cut(s) 50, 185, 187, 189, 256
BspHI TCATGA 1 cut(s) 1230
BspMAI CTGCAG 1 cut(s) 2131
BspPI GGATC 4 cut(s) 1699, 2273, 2626, 2784
BspQI GCTCTTC 2 cut(s) 128, 1056
BspT107I GGYRCC 2 cut(s) 342, 2191
BspTI CTTAAG 2 cut(s) 898, 1709
BsrBI CCGCTC 1 cut(s) 1662
BsrDI GCAATG 5 cut(s) 1274, 1319, 2347, 2355, 2494
BsrFI RCCGGY 1 cut(s) 44
BsrGI TGTACA 2 cut(s) 885, 1646
BsrI ACTGG 4 cut(s) 1909, 2058, 2297, 2509
BssAI RCCGGY 1 cut(s) 44
BssHII GCGCGC 1 cut(s) 185
BssSI CACGAG 2 cut(s) 1143, 1515
BssT1I CCWWGG 5 cut(s) 39, 177, 276, 393, 540
Bst2BI CACGAG 2 cut(s) 1143, 1515
Bst2UI CCWGG 3 cut(s) 35, 83, 2537
Bst4CI ACNGT 9 cut(s) 67, 79, 214, 1546, 1855, 2304, 2375, 2435, 2686
Bst6I CTCTTC 6 cut(s) 111, 128, 1056, 1413, 2692, 2698
BstAFI CTTAAG 2 cut(s) 898, 1709
BstAPI GCANNNNNTGC 3 cut(s) 364, 520, 788
BstAUI TGTACA 2 cut(s) 885, 1646
BstBAI YACGTR 1 cut(s) 361
BstDSI CCRYGG 2 cut(s) 393, 2300
BstENI CCTNNNNNAGG 1 cut(s) 38
BstF5I GGATG 5 cut(s) 295, 800, 827, 969, 1036
BstFNI CGCG 5 cut(s) 50, 185, 187, 189, 256
BstHHI GCGC 6 cut(s) 50, 187, 189, 256, 565, 1155
BstMAI GTCTC 4 cut(s) 9, 1248, 1936, 2731
BstNI CCWGG 3 cut(s) 35, 83, 2537
BstNSI RCATGY 4 cut(s) 1072, 1090, 1391, 1745
BstPAI GACNNNNGTC 1 cut(s) 77
BstSCI CCNGG 9 cut(s) 33, 81, 92, 266, 346, 347, 1026, 2163, 2535
BstSFI CTRYAG 2 cut(s) 23, 2127
BstSLI GKGCMC 3 cut(s) 99, 360, 2194
BstUI CGCG 5 cut(s) 50, 185, 187, 189, 256
BstV1I GCAGC 5 cut(s) 1311, 1314, 1537, 2026, 2137
BstV2I GAAGAC 2 cut(s) 23, 68
BstX2I RGATCY 3 cut(s) 1345, 1457, 2776
BstXI CCANNNNNNTGG 1 cut(s) 400
BstYI RGATCY 3 cut(s) 1345, 1457, 2776
Bsu36I CCTNAGG 1 cut(s) 667
BsuI GTATCC 1 cut(s) 216
BtgI CCRYGG 2 cut(s) 393, 2300
BtgZI GCGATG 2 cut(s) 413, 1657
BtsCI GGATG 5 cut(s) 295, 800, 827, 969, 1036
BtsI GCAGTG 1 cut(s) 753
BtsIMutI CAGTG 3 cut(s) 210, 743, 753
CciI TCATGA 1 cut(s) 1230
CfoI GCGC 6 cut(s) 50, 187, 189, 256, 565, 1155
Cfr10I RCCGGY 1 cut(s) 44
Cfr9I CCCGGG 1 cut(s) 347
CseI GACGC 2 cut(s) 208, 411
Csp6I GTAC 9 cut(s) 68, 725, 886, 1163, 1647, 1683, 2371, 2394, 2682
CspCI CAANNNNNGTGG 2 cut(s) 2667, 2702
CviQI GTAC 9 cut(s) 68, 725, 886, 1163, 1647, 1683, 2371, 2394, 2682
DraIII CACNNNGTG 1 cut(s) 364
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 6 cut(s) 111, 128, 1056, 1413, 2692, 2698
EarI CTCTTC 6 cut(s) 111, 128, 1056, 1413, 2692, 2698
EciI GGCGGA 3 cut(s) 130, 163, 299
Ecl136II GAGCTC 1 cut(s) 121
Eco130I CCWWGG 5 cut(s) 39, 177, 276, 393, 540
Eco147I AGGCCT 1 cut(s) 665
Eco24I GRGCYC 3 cut(s) 99, 123, 1908
Eco32I GATATC 1 cut(s) 304
Eco47I GGWCC 5 cut(s) 79, 146, 2000, 2439, 2733
Eco53kI GAGCTC 1 cut(s) 121
Eco57I CTGAAG 3 cut(s) 92, 719, 1472
Eco72I CACGTG 1 cut(s) 361
Eco81I CCTNAGG 1 cut(s) 667
Eco88I CYCGRG 3 cut(s) 347, 590, 2187
EcoICRI GAGCTC 1 cut(s) 121
EcoNI CCTNNNNNAGG 1 cut(s) 38
EcoRI GAATTC 1 cut(s) 2035
EcoRII CCWGG 3 cut(s) 33, 81, 2535
EcoRV GATATC 1 cut(s) 304
EcoT14I CCWWGG 5 cut(s) 39, 177, 276, 393, 540
EcoT38I GRGCYC 3 cut(s) 99, 123, 1908
ErhI CCWWGG 5 cut(s) 39, 177, 276, 393, 540
FalI AAGNNNNNCTT 2 cut(s) 1447, 1479
FaqI GGGAC 3 cut(s) 1897, 2000, 2145
FauI CCCGC 3 cut(s) 157, 255, 1439
Fnu4HI GCNGC 9 cut(s) 183, 282, 321, 335, 1325, 1328, 1551, 2015, 2151
FokI GGATG 5 cut(s) 302, 807, 834, 976, 1043
FriOI GRGCYC 3 cut(s) 99, 123, 1908
Fsp4HI GCNGC 9 cut(s) 183, 282, 321, 335, 1325, 1328, 1551, 2015, 2151
FspAI RTGCGCAY 1 cut(s) 564
FspI TGCGCA 1 cut(s) 564
GlaI GCGC 6 cut(s) 49, 186, 188, 255, 564, 1154
GluI GCNGC 9 cut(s) 183, 282, 321, 335, 1325, 1328, 1551, 2015, 2151
GsaI CCCAGC 1 cut(s) 1780
GsuI CTGGAG 3 cut(s) 509, 1892, 2015
HapII CCGG 9 cut(s) 45, 93, 144, 267, 348, 686, 792, 1027, 2165
HgaI GACGC 2 cut(s) 208, 411
HhaI GCGC 6 cut(s) 50, 187, 189, 256, 565, 1155
Hin6I GCGC 6 cut(s) 48, 185, 187, 254, 563, 1153
HinP1I GCGC 6 cut(s) 48, 185, 187, 254, 563, 1153
HincII GTYRAC 2 cut(s) 1657, 2754
HindII GTYRAC 2 cut(s) 1657, 2754
HindIII AAGCTT 1 cut(s) 626
HpaII CCGG 9 cut(s) 45, 93, 144, 267, 348, 686, 792, 1027, 2165
HphI GGTGA 5 cut(s) 415, 579, 1325, 1567, 2244
Hpy166II GTNNAC 4 cut(s) 358, 1657, 1683, 2754
Hpy188I TCNGA 9 cut(s) 9, 250, 471, 805, 1099, 1120, 1536, 1833, 2004
Hpy8I GTNNAC 4 cut(s) 358, 1657, 1683, 2754
Hpy99I CGWCG 1 cut(s) 79
HpyAV CCTTC 8 cut(s) 232, 466, 931, 1403, 2028, 2343, 2452, 2685
HpyCH4III ACNGT 9 cut(s) 67, 79, 214, 1546, 1855, 2304, 2375, 2435, 2686
HpyCH4IV ACGT 1 cut(s) 360
HpySE526I ACGT 1 cut(s) 360
HspAI GCGC 6 cut(s) 48, 185, 187, 254, 563, 1153
Kpn2I TCCGGA 1 cut(s) 685
KroI GCCGGC 1 cut(s) 44
KroNI GCCGGC 1 cut(s) 46
LguI GCTCTTC 2 cut(s) 128, 1056
Lsp1109I GCAGC 5 cut(s) 1311, 1314, 1537, 2026, 2137
LweI GCATC 8 cut(s) 280, 307, 574, 791, 1129, 1417, 2162, 2212
MaeII ACGT 1 cut(s) 360
MaeIII GTNAC 7 cut(s) 403, 1313, 1849, 1855, 1937, 2250, 2516
MauBI CGCGCGCG 1 cut(s) 185
MbiI CCGCTC 1 cut(s) 1662
MfeI CAATTG 1 cut(s) 999
MflI RGATCY 3 cut(s) 1345, 1457, 2776
MhlI GDGCHC 7 cut(s) 99, 123, 360, 1051, 1304, 1908, 2194
MlsI TGGCCA 1 cut(s) 38
MluNI TGGCCA 1 cut(s) 38
MlyI GAGTC 6 cut(s) 545, 713, 989, 1250, 1569, 2146
MmeI TCCRAC 3 cut(s) 483, 2384, 2417
Mox20I TGGCCA 1 cut(s) 38
MroI TCCGGA 1 cut(s) 685
MroNI GCCGGC 1 cut(s) 44
MroXI GAANNNNTTC 3 cut(s) 1590, 1954, 2085
MscI TGGCCA 1 cut(s) 38
MseI TTAA 4 cut(s) 480, 899, 1710, 1784
MslI CAYNNNNRTG 4 cut(s) 398, 558, 873, 1307
Msp20I TGGCCA 1 cut(s) 38
MspA1I CMGCKG 1 cut(s) 2609
MspCI CTTAAG 2 cut(s) 898, 1709
MspI CCGG 9 cut(s) 45, 93, 144, 267, 348, 686, 792, 1027, 2165
MspR9I CCNGG 9 cut(s) 35, 83, 94, 268, 348, 349, 1028, 2165, 2537
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 1 cut(s) 394
MvaI CCWGG 3 cut(s) 35, 83, 2537
MvnI CGCG 5 cut(s) 50, 185, 187, 189, 256
NaeI GCCGGC 1 cut(s) 46
NciI CCSGG 6 cut(s) 94, 268, 348, 349, 1028, 2165
NcoI CCATGG 1 cut(s) 393
NgoMIV GCCGGC 1 cut(s) 44
NmuCI GTSAC 4 cut(s) 403, 1313, 1855, 2250
NsbI TGCGCA 1 cut(s) 564
NspI RCATGY 4 cut(s) 1072, 1090, 1391, 1745
OliI CACNNNNGTG 1 cut(s) 1307
PagI TCATGA 1 cut(s) 1230
PauI GCGCGC 1 cut(s) 185
PceI AGGCCT 1 cut(s) 665
PciI ACATGT 1 cut(s) 1387
PciSI GCTCTTC 2 cut(s) 128, 1056
PcsI WCGNNNNNNNCGW 2 cut(s) 71, 123
PctI GAATGC 1 cut(s) 394
PdiI GCCGGC 1 cut(s) 46
PdmI GAANNNNTTC 3 cut(s) 1590, 1954, 2085
PfeI GAWTC 7 cut(s) 1213, 1591, 1862, 1869, 2479, 2540, 2563
PfoI TCCNGGA 2 cut(s) 81, 1026
PkrI GCNGC 9 cut(s) 184, 283, 322, 336, 1326, 1329, 1552, 2016, 2152
PleI GAGTC 6 cut(s) 544, 713, 988, 1249, 1568, 2145
PmaCI CACGTG 1 cut(s) 361
PmlI CACGTG 1 cut(s) 361
PpsI GAGTC 6 cut(s) 544, 713, 988, 1249, 1568, 2145
Ppu21I YACGTR 1 cut(s) 361
PscI ACATGT 1 cut(s) 1387
PshAI GACNNNNGTC 1 cut(s) 77
Psp124BI GAGCTC 1 cut(s) 123
Psp6I CCWGG 3 cut(s) 33, 81, 2535
PspCI CACGTG 1 cut(s) 361
PspFI CCCAGC 1 cut(s) 1776
PspGI CCWGG 3 cut(s) 33, 81, 2535
PspOMI GGGCCC 1 cut(s) 95
PstI CTGCAG 1 cut(s) 2131
PsuI RGATCY 3 cut(s) 1345, 1457, 2776
PteI GCGCGC 1 cut(s) 185
PvuII CAGCTG 1 cut(s) 2609
RsaI GTAC 9 cut(s) 69, 726, 887, 1164, 1648, 1684, 2372, 2395, 2683
RsaNI GTAC 9 cut(s) 68, 725, 886, 1163, 1647, 1683, 2371, 2394, 2682
RseI CAYNNNNRTG 4 cut(s) 398, 558, 873, 1307
SacI GAGCTC 1 cut(s) 123
SapI GCTCTTC 2 cut(s) 128, 1056
SaqAI TTAA 4 cut(s) 480, 899, 1710, 1784
SatI GCNGC 9 cut(s) 183, 282, 321, 335, 1325, 1328, 1551, 2015, 2151
ScaI AGTACT 1 cut(s) 2683
SchI GAGTC 6 cut(s) 545, 713, 989, 1250, 1569, 2146
ScrFI CCNGG 9 cut(s) 35, 83, 94, 268, 348, 349, 1028, 2165, 2537
SduI GDGCHC 7 cut(s) 99, 123, 360, 1051, 1304, 1908, 2194
SfaNI GCATC 8 cut(s) 280, 307, 574, 791, 1129, 1417, 2162, 2212
SfcI CTRYAG 2 cut(s) 23, 2127
SinI GGWCC 5 cut(s) 79, 146, 2000, 2439, 2733
SmaI CCCGGG 1 cut(s) 349
SmiMI CAYNNNNRTG 4 cut(s) 398, 558, 873, 1307
SmlI CTYRAG 4 cut(s) 898, 1709, 1933, 2389
SmoI CTYRAG 4 cut(s) 898, 1709, 1933, 2389
SseBI AGGCCT 1 cut(s) 665
SspI AATATT 1 cut(s) 2625
SstI GAGCTC 1 cut(s) 123
StuI AGGCCT 1 cut(s) 665
StyD4I CCNGG 9 cut(s) 33, 81, 92, 266, 346, 347, 1026, 2163, 2535
StyI CCWWGG 5 cut(s) 39, 177, 276, 393, 540
TaaI ACNGT 9 cut(s) 67, 79, 214, 1546, 1855, 2304, 2375, 2435, 2686
TaiI ACGT 1 cut(s) 363
TaqII GACCGA 1 cut(s) 2721
TatI WGTACW 6 cut(s) 724, 885, 1646, 1682, 2393, 2681
TauI GCSGC 4 cut(s) 185, 284, 323, 337
TfiI GAWTC 7 cut(s) 1213, 1591, 1862, 1869, 2479, 2540, 2563
Tru1I TTAA 4 cut(s) 480, 899, 1710, 1784
Tru9I TTAA 4 cut(s) 480, 899, 1710, 1784
TscAI CASTG 3 cut(s) 217, 750, 760
TseFI GTSAC 4 cut(s) 403, 1313, 1855, 2250
TseI GCWGC 5 cut(s) 1324, 1327, 1550, 2014, 2150
Tsp45I GTSAC 4 cut(s) 403, 1313, 1855, 2250
TspGWI ACGGA 2 cut(s) 422, 1874
TspMI CCCGGG 1 cut(s) 347
TspRI CASTG 3 cut(s) 217, 750, 760
Vha464I CTTAAG 2 cut(s) 898, 1709
VneI GTGCAC 1 cut(s) 356
VpaK11BI GGWCC 5 cut(s) 79, 146, 2000, 2439, 2733
XagI CCTNNNNNAGG 1 cut(s) 38
XapI RAATTY 4 cut(s) 689, 1192, 2035, 2110
XbaI TCTAGA 1 cut(s) 1618
XceI RCATGY 4 cut(s) 1072, 1090, 1391, 1745
XcmI CCANNNNNNNNNTGG 1 cut(s) 2543
XmaI CCCGGG 1 cut(s) 347
XmnI GAANNNNTTC 3 cut(s) 1590, 1954, 2085
ZrmI AGTACT 1 cut(s) 2683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.