MD05G1024500.v1.1
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0011817
Physical Location & Seq
Reverse (-)
3990319 .. 3993080
2762 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1024500.v1.1.491

Sequence Viewer

Length: 1719 bp
ATGCCTGCGGTTCCTGCGGCTGTGCCTGACAAATCATCAACTATGTTCCCATCTGGCGGGAGCTCCGGTGTCGAAGCGGCCCACACGGCAGAAGTGGTTCCTGAAGGAAGTCATGAATCCAAAACGACAAACGTGCTGTCAAATTCAGTTCAAGAGGAAAACAAGGGTGACCGGAACTTATCTGGAGGAAAGCGGTGGCCTCGACAAGAAACGGTGGCGCTTCTGAAGATACGGTCTCAAATGGATGACGCTTTTCGCGACTCAAGTCTCAAAGCTCCATTGTGGGAAGATGTTTCAAGAAAGCTAGGTGAGCTTGGTTATTACCGAAGCGCTAAGAAATGCAAGGAGAAATTCGAGAACGTGTATAAGTACCACAGGAGAACCAAAGAAGGCCGATCTGGAAAACAAGAAGGAAAAACATATCGATTTTTCGATGAACTTGAAGCTTTCGCTCATCAAAATCATCATCATCCATCAACAATACAACCAAAACCTCAAGTAGTACTGTGGCCAACCATGAACAACAACCATCCAAACAACCCTAGTCTTGTAGTTCCTCATGTCACCATTACTACTCTTCCTCCTTCTTCAACACCAAGCATCCTGACCCCAACCAGTGGCTCTCTTCCAAATGGTCCTCAAATTTCACCACCACACATTACAATATCACCTCTCAATCTCTCTCATCAGAATATTAATGGGTTCAAGCCAAACTTGGCAACAAACAATCTTTTTTCGAGTTCTACTTCCTCGACTGCCTCCGACGAAGAGTTTCAAGTTCAACCGCGCAACAAGAGAAAAAGGAAGTGGAAGTACTTCTTCAGAAGGCTGACCAAGGACGTGCTGGAGAAGCAAGAAAGTCTGCAGGAGAAATTCTTGGAAGCAATAGCAAAATGCGAGCACCAACGAATGGCGAGAGAAGAAGCTTGGAGGATGGAAGAGATGGCGAGGATGAGTAAAGAACACGAAATTTTAGCCAAAGAAAGATCGTTAGCAGCAGCAAAAGATGCCGCGGTTATTGAATTCTTGCACAAGGTTTCGGGACAACAAAATTTGACGAATATGCAAGCACTTGAGGCACCATCATCCCAGCCTCAGCCAATGTCAGTACTAATGCCACCACCGCTGCCAGCTCCGGTGGCAGTGACCAGAAGTAGTAATTTTGAGGTTCCGAAACTGAATAAGGGTGAAAGTCCATTTCCTGCAGGGTCCACAAGATGGCCAAGAGTTGAAGTTGAAGCTTTGATAAACTTGAGGACATGTCTTGACGTGAAGTACCAAGAAGCCGGGCCTAAAGGATCTCTTTGGGAGGAGATATCGGTGGGGATGAAGCGGCTCGGATACAATAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTACAAGAAGGTGAAGGAAAGCAGCAAAACACGCTCTGAGGATTCAAAAACATGTCCATATTTTCACCTGCTGGACATCTTGCACAGTAAAAAGAACAATAAGAATGCTGCTAGTTATGTGGAGAAGCCCATTGCTGAAACAATGCAGCCGTTGATCAAGGTCCAGCCAGACCAGCCGGTGATTGAAGATATTGAAAGGGAAAACGGGGAGCGAAATGGAGACGACGAAGATGGAGAGAGTACAGAGGAAGAAGATCGGAGTGATGACCAGATGGAGATGGTAACCAACGACAAAGATTCATCAATGGACATGGTAGATTCATGA

Protein Analysis

573

Amino Acids

64.62

Weight (kDa)

8.07

Isoelectric Point (pI)

63.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 64 - 149 2e-21 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 405 - 490 3.7e-23 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011817)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76890
fragaria_vesca FvH4_2g13840
malus_domestica MD05G1024500.v1.1 MD10G1025200.v1.1
prunus_persica Prupe.8G028800_v2.0.a1 Prupe.8G028800_v2.0.a1
pyrus_communis pycom05g01570 pycom10g01660
rosa_chinensis RchiOBHm_Chr6g0275491
rosa_laevigata RLG00000013460
rosa_multiflora Rmu_sc0006527.1_g000008 Rmu_sc0033082.1_g000001
rosa_roxburghii Rroxscaffold_7G00193230
rosa_rugosa Rorug06G0093300
rosa_samantha Rh6AG206000 Rh6BG209000 Rh6CG211200 Rh6DG201500
rosa_wichuraiana Rw6G017870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1470
Acc36I ACCTGC 1 cut(s) 1470
AccB1I GGYRCC 1 cut(s) 1078
AccB7I CCANNNNNTGG 3 cut(s) 617, 910, 1218
AccII CGCG 3 cut(s) 258, 787, 1013
AclWI GGATC 1 cut(s) 1306
AcoI YGGCCR 2 cut(s) 509, 1220
AcsI RAATTY 7 cut(s) 142, 350, 642, 872, 969, 1022, 1051
AcuI CTGAAG 3 cut(s) 123, 245, 805
AfaI GTAC 7 cut(s) 371, 504, 815, 1110, 1277, 1394, 1636
AfeI AGCGCT 1 cut(s) 331
AfiI CCNNNNNNNGG 4 cut(s) 56, 617, 910, 1218
AflIII ACRYGT 3 cut(s) 360, 1259, 1445
AjiI CACGTC 2 cut(s) 841, 1270
AluBI AGCT 8 cut(s) 63, 275, 304, 313, 446, 926, 1133, 1241
AluI AGCT 8 cut(s) 63, 275, 304, 313, 446, 926, 1133, 1241
Alw21I GWGCWC 2 cut(s) 65, 903
Alw26I GTCTC 3 cut(s) 240, 272, 1608
AlwI GGATC 1 cut(s) 1306
Aor51HI AGCGCT 1 cut(s) 331
AoxI GGCC 6 cut(s) 78, 197, 391, 509, 1220, 1289
ApeKI GCWGC 6 cut(s) 995, 998, 1126, 1416, 1502, 1540
ApoI RAATTY 7 cut(s) 142, 350, 642, 872, 969, 1022, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 122, 154
AseI ATTAAT 1 cut(s) 696
Asp700I GAANNNNTTC 3 cut(s) 96, 771, 815
AspLEI GCGC 3 cut(s) 220, 332, 789
AspS9I GGNCC 5 cut(s) 79, 635, 1209, 1289, 1555
AsuC2I CCSGG 1 cut(s) 1288
AsuHPI GGTGA 9 cut(s) 179, 320, 556, 639, 660, 1199, 1417, 1451, 1585
AvaII GGWCC 3 cut(s) 635, 1209, 1555
BalI TGGCCA 2 cut(s) 511, 1222
BanI GGYRCC 1 cut(s) 1078
BanII GRGCYC 1 cut(s) 65
BarI GAAGNNNNNNTAC 2 cut(s) 797, 829
Bbv12I GWGCWC 2 cut(s) 65, 903
BbvCI CCTCAGC 1 cut(s) 1095
BbvI GCAGC 6 cut(s) 1007, 1010, 1113, 1428, 1489, 1552
BceAI ACGGC 2 cut(s) 102, 1528
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciVI GTATCC 1 cut(s) 1334
BclI TGATCA 1 cut(s) 1548
BcnI CCSGG 1 cut(s) 1288
BcoDI GTCTC 3 cut(s) 240, 272, 1608
BfaI CTAG 3 cut(s) 305, 543, 1506
BfmI CTRYAG 2 cut(s) 863, 1203
BfoI RGCGCY 2 cut(s) 221, 333
BfuAI ACCTGC 1 cut(s) 1470
BfuI GTATCC 1 cut(s) 1334
BglI GCCNNNNNGGC 1 cut(s) 86
BmcAI AGTACT 4 cut(s) 504, 815, 1110, 1394
Bme1390I CCNGG 1 cut(s) 1288
Bme18I GGWCC 3 cut(s) 635, 1209, 1555
BmgBI CACGTC 2 cut(s) 841, 1270
BmgT120I GGNCC 5 cut(s) 79, 635, 1209, 1289, 1555
BmiI GGNNCC 5 cut(s) 12, 99, 1080, 1170, 1210
BmrFI CCNGG 1 cut(s) 1288
BmsI GCATC 2 cut(s) 609, 997
BoxI GACNNNNGTC 1 cut(s) 264
BpmI CTGGAG 2 cut(s) 204, 866
Bpu10I CCTNAGC 1 cut(s) 1095
BpuEI CTTGAG 4 cut(s) 247, 480, 1094, 1273
BpuMI CCSGG 1 cut(s) 1288
Bsa29I ATCGAT 1 cut(s) 424
BsaI GGTCTC 1 cut(s) 240
BsaJI CCNNGG 2 cut(s) 834, 1011
BsaWI WCCGGW 3 cut(s) 65, 171, 1135
BsaXI ACNNNNNCTCC 4 cut(s) 52, 82, 565, 595
Bsc4I CCNNNNNNNGG 4 cut(s) 56, 617, 910, 1218
Bse118I RCCGGY 1 cut(s) 1570
Bse1I ACTGG 1 cut(s) 615
Bse3DI GCAATG 1 cut(s) 1524
BseCI ATCGAT 1 cut(s) 424
BseDI CCNNGG 2 cut(s) 834, 1011
BseGI GGATG 8 cut(s) 250, 469, 529, 600, 939, 957, 1085, 1332
BseLI CCNNNNNNNGG 4 cut(s) 56, 617, 910, 1218
BseMI GCAATG 1 cut(s) 1524
BseMII CTCAG 2 cut(s) 1109, 1422
BseNI ACTGG 1 cut(s) 615
BseRI GAGGAG 1 cut(s) 1325
BseXI GCAGC 6 cut(s) 1007, 1010, 1113, 1428, 1489, 1552
BseYI CCCAGC 1 cut(s) 1089
Bsh1236I CGCG 3 cut(s) 258, 787, 1013
BshFI GGCC 6 cut(s) 80, 199, 393, 511, 1222, 1291
BshNI GGYRCC 1 cut(s) 1078
BshVI ATCGAT 1 cut(s) 424
BsiHKAI GWGCWC 2 cut(s) 65, 903
BsiSI CCGG 5 cut(s) 66, 172, 1136, 1287, 1571
BslFI GGGAC 1 cut(s) 1056
BslI CCNNNNNNNGG 4 cut(s) 56, 617, 910, 1218
BsmAI GTCTC 3 cut(s) 240, 272, 1608
BsmBI CGTCTC 1 cut(s) 1608
BsmFI GGGAC 1 cut(s) 1056
BsmI GAATGC 1 cut(s) 1504
BsnI GGCC 6 cut(s) 80, 199, 393, 511, 1222, 1291
Bso31I GGTCTC 1 cut(s) 240
Bsp1286I GDGCHC 2 cut(s) 65, 903
Bsp143I GATC 5 cut(s) 395, 986, 1298, 1548, 1648
Bsp68I TCGCGA 1 cut(s) 258
BspANI GGCC 6 cut(s) 80, 199, 393, 511, 1222, 1291
BspCNI CTCAG 2 cut(s) 1108, 1423
BspDI ATCGAT 1 cut(s) 424
BspFNI CGCG 3 cut(s) 258, 787, 1013
BspHI TCATGA 2 cut(s) 112, 1715
BspLI GGNNCC 5 cut(s) 12, 99, 1080, 1170, 1210
BspMAI CTGCAG 2 cut(s) 867, 1207
BspMI ACCTGC 1 cut(s) 1470
BspPI GGATC 1 cut(s) 1306
BspT107I GGYRCC 1 cut(s) 1078
BspTNI GGTCTC 1 cut(s) 240
BsrDI GCAATG 1 cut(s) 1524
BsrFI RCCGGY 1 cut(s) 1570
BsrI ACTGG 1 cut(s) 615
BssAI RCCGGY 1 cut(s) 1570
BssECI CCNNGG 2 cut(s) 834, 1011
BssMI GATC 5 cut(s) 395, 986, 1298, 1548, 1648
BssT1I CCWWGG 1 cut(s) 834
Bst4CI ACNGT 4 cut(s) 214, 234, 507, 1481
Bst6I CTCTTC 4 cut(s) 582, 630, 762, 933
BstAPI GCANNNNNTGC 1 cut(s) 1007
BstC8I GCNNGC 4 cut(s) 6, 899, 1068, 1131
BstDEI CTNAG 3 cut(s) 333, 1095, 1431
BstDSI CCRYGG 1 cut(s) 1011
BstEII GGTNACC 2 cut(s) 167, 1675
BstF5I GGATG 8 cut(s) 250, 469, 529, 600, 939, 957, 1085, 1332
BstFNI CGCG 3 cut(s) 258, 787, 1013
BstH2I RGCGCY 2 cut(s) 221, 333
BstHHI GCGC 3 cut(s) 220, 332, 789
BstKTI GATC 5 cut(s) 398, 989, 1301, 1551, 1651
BstMAI GTCTC 3 cut(s) 240, 272, 1608
BstMBI GATC 5 cut(s) 395, 986, 1298, 1548, 1648
BstNSI RCATGY 2 cut(s) 1263, 1449
BstPAI GACNNNNGTC 1 cut(s) 264
BstPI GGTNACC 2 cut(s) 167, 1675
BstSCI CCNGG 1 cut(s) 1286
BstSFI CTRYAG 2 cut(s) 863, 1203
BstUI CGCG 3 cut(s) 258, 787, 1013
BstV1I GCAGC 6 cut(s) 1007, 1010, 1113, 1428, 1489, 1552
BstX2I RGATCY 1 cut(s) 1298
BstYI RGATCY 1 cut(s) 1298
Bsu15I ATCGAT 1 cut(s) 424
BsuI GTATCC 1 cut(s) 1334
BsuRI GGCC 6 cut(s) 80, 199, 393, 511, 1222, 1291
BsuTUI ATCGAT 1 cut(s) 424
BtgI CCRYGG 1 cut(s) 1011
BtrI CACGTC 2 cut(s) 841, 1270
BtsCI GGATG 8 cut(s) 250, 469, 529, 600, 939, 957, 1085, 1332
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 2 cut(s) 622, 1149
BtuMI TCGCGA 1 cut(s) 258
BveI ACCTGC 1 cut(s) 1470
Cac8I GCNNGC 4 cut(s) 6, 899, 1068, 1131
CciI TCATGA 2 cut(s) 112, 1715
CfoI GCGC 3 cut(s) 220, 332, 789
Cfr10I RCCGGY 1 cut(s) 1570
Cfr13I GGNCC 5 cut(s) 79, 635, 1209, 1289, 1555
Cfr42I CCGCGG 1 cut(s) 1014
ClaI ATCGAT 1 cut(s) 424
CseI GACGC 1 cut(s) 257
Csp6I GTAC 7 cut(s) 370, 503, 814, 1109, 1276, 1393, 1635
CviAII CATG 7 cut(s) 113, 517, 560, 1260, 1446, 1705, 1716
CviQI GTAC 7 cut(s) 370, 503, 814, 1109, 1276, 1393, 1635
DdeI CTNAG 3 cut(s) 333, 1095, 1431
DpnI GATC 5 cut(s) 397, 988, 1300, 1550, 1650
DpnII GATC 5 cut(s) 395, 986, 1298, 1548, 1648
EaeI YGGCCR 2 cut(s) 509, 1220
Eam1104I CTCTTC 4 cut(s) 582, 630, 762, 933
EarI CTCTTC 4 cut(s) 582, 630, 762, 933
Ecl136II GAGCTC 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 834
Eco24I GRGCYC 1 cut(s) 65
Eco31I GGTCTC 1 cut(s) 240
Eco32I GATATC 1 cut(s) 1317
Eco47I GGWCC 3 cut(s) 635, 1209, 1555
Eco47III AGCGCT 1 cut(s) 331
Eco53kI GAGCTC 1 cut(s) 63
Eco57I CTGAAG 3 cut(s) 123, 245, 805
Eco91I GGTNACC 2 cut(s) 167, 1675
EcoICRI GAGCTC 1 cut(s) 63
EcoO65I GGTNACC 2 cut(s) 167, 1675
EcoRI GAATTC 1 cut(s) 1022
EcoRV GATATC 1 cut(s) 1317
EcoT14I CCWWGG 1 cut(s) 834
EcoT38I GRGCYC 1 cut(s) 65
ErhI CCWWGG 1 cut(s) 834
Esp3I CGTCTC 1 cut(s) 1608
FaeI CATG 7 cut(s) 116, 520, 563, 1263, 1449, 1708, 1719
FalI AAGNNNNNCTT 6 cut(s) 698, 730, 803, 835, 1287, 1319
FaqI GGGAC 1 cut(s) 1056
FatI CATG 7 cut(s) 112, 516, 559, 1259, 1445, 1704, 1715
FauI CCCGC 1 cut(s) 50
FbaI TGATCA 1 cut(s) 1548
FokI GGATG 8 cut(s) 257, 456, 516, 587, 946, 964, 1072, 1339
FriOI GRGCYC 1 cut(s) 65
FspBI CTAG 3 cut(s) 305, 543, 1506
GlaI GCGC 3 cut(s) 219, 331, 788
GsaI CCCAGC 1 cut(s) 1093
GsuI CTGGAG 2 cut(s) 204, 866
HaeII RGCGCY 2 cut(s) 221, 333
HaeIII GGCC 6 cut(s) 80, 199, 393, 511, 1222, 1291
HapII CCGG 5 cut(s) 66, 172, 1136, 1287, 1571
HgaI GACGC 1 cut(s) 257
HhaI GCGC 3 cut(s) 220, 332, 789
Hin1II CATG 7 cut(s) 116, 520, 563, 1263, 1449, 1708, 1719
Hin6I GCGC 3 cut(s) 218, 330, 787
HinP1I GCGC 3 cut(s) 218, 330, 787
HindIII AAGCTT 3 cut(s) 444, 924, 1239
HinfI GANTC 5 cut(s) 116, 260, 1436, 1691, 1712
HpaII CCGG 5 cut(s) 66, 172, 1136, 1287, 1571
HphI GGTGA 9 cut(s) 179, 320, 556, 639, 660, 1199, 1417, 1451, 1585
Hpy166II GTNNAC 1 cut(s) 1212
Hpy188I TCNGA 8 cut(s) 225, 690, 763, 824, 1173, 1340, 1432, 1653
Hpy8I GTNNAC 1 cut(s) 1212
Hpy99I CGWCG 2 cut(s) 767, 1622
HpyAV CCTTC 7 cut(s) 98, 383, 404, 594, 819, 1396, 1402
HpyCH4III ACNGT 4 cut(s) 214, 234, 507, 1481
HpyCH4IV ACGT 4 cut(s) 132, 360, 840, 1269
HpyCH4V TGCA 9 cut(s) 342, 865, 1030, 1066, 1205, 1355, 1365, 1477, 1540
HpyF3I CTNAG 3 cut(s) 333, 1095, 1431
HpySE526I ACGT 4 cut(s) 132, 360, 840, 1269
Hsp92II CATG 7 cut(s) 116, 520, 563, 1263, 1449, 1708, 1719
HspAI GCGC 3 cut(s) 218, 330, 787
Ksp22I TGATCA 1 cut(s) 1548
KspI CCGCGG 1 cut(s) 1014
Kzo9I GATC 5 cut(s) 395, 986, 1298, 1548, 1648
LmnI GCTCC 5 cut(s) 60, 68, 280, 1138, 1603
Lsp1109I GCAGC 6 cut(s) 1007, 1010, 1113, 1428, 1489, 1552
LweI GCATC 2 cut(s) 609, 997
MaeI CTAG 3 cut(s) 305, 543, 1506
MaeII ACGT 4 cut(s) 132, 360, 840, 1269
MaeIII GTNAC 4 cut(s) 167, 562, 1144, 1675
MalI GATC 5 cut(s) 397, 988, 1300, 1550, 1650
MboI GATC 5 cut(s) 395, 986, 1298, 1548, 1648
MflI RGATCY 1 cut(s) 1298
MhlI GDGCHC 2 cut(s) 65, 903
MlsI TGGCCA 2 cut(s) 511, 1222
MluCI AATT 8 cut(s) 142, 350, 642, 872, 969, 1022, 1051, 1159
MluNI TGGCCA 2 cut(s) 511, 1222
MlyI GAGTC 1 cut(s) 254
MmeI TCCRAC 1 cut(s) 786
Mox20I TGGCCA 2 cut(s) 511, 1222
MroXI GAANNNNTTC 3 cut(s) 96, 771, 815
MscI TGGCCA 2 cut(s) 511, 1222
MseI TTAA 1 cut(s) 696
Msp20I TGGCCA 2 cut(s) 511, 1222
MspA1I CMGCKG 2 cut(s) 1013, 1126
MspI CCGG 5 cut(s) 66, 172, 1136, 1287, 1571
MspR9I CCNGG 1 cut(s) 1288
Mva1269I GAATGC 1 cut(s) 1504
MvnI CGCG 3 cut(s) 258, 787, 1013
NciI CCSGG 1 cut(s) 1288
NdeII GATC 5 cut(s) 395, 986, 1298, 1548, 1648
NlaIII CATG 7 cut(s) 116, 520, 563, 1263, 1449, 1708, 1719
NlaIV GGNNCC 5 cut(s) 12, 99, 1080, 1170, 1210
NmuCI GTSAC 3 cut(s) 167, 562, 1144
NruI TCGCGA 1 cut(s) 258
NspI RCATGY 2 cut(s) 1263, 1449
PagI TCATGA 2 cut(s) 112, 1715
PaqCI CACCTGC 1 cut(s) 1470
PciI ACATGT 2 cut(s) 1259, 1445
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1504
PdmI GAANNNNTTC 3 cut(s) 96, 771, 815
PfeI GAWTC 4 cut(s) 116, 1436, 1691, 1712
PflMI CCANNNNNTGG 3 cut(s) 617, 910, 1218
PleI GAGTC 1 cut(s) 254
PpsI GAGTC 1 cut(s) 254
PscI ACATGT 2 cut(s) 1259, 1445
PshAI GACNNNNGTC 1 cut(s) 264
PshBI ATTAAT 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 65
PspEI GGTNACC 2 cut(s) 167, 1675
PspFI CCCAGC 1 cut(s) 1089
PspN4I GGNNCC 5 cut(s) 12, 99, 1080, 1170, 1210
PspPI GGNCC 5 cut(s) 79, 635, 1209, 1289, 1555
PstI CTGCAG 2 cut(s) 867, 1207
PsuI RGATCY 1 cut(s) 1298
RruI TCGCGA 1 cut(s) 258
RsaI GTAC 7 cut(s) 371, 504, 815, 1110, 1277, 1394, 1636
RsaNI GTAC 7 cut(s) 370, 503, 814, 1109, 1276, 1393, 1635
SacI GAGCTC 1 cut(s) 65
SacII CCGCGG 1 cut(s) 1014
SaqAI TTAA 1 cut(s) 696
Sau3AI GATC 5 cut(s) 395, 986, 1298, 1548, 1648
Sau96I GGNCC 5 cut(s) 79, 635, 1209, 1289, 1555
SbfI CCTGCAGG 1 cut(s) 1207
ScaI AGTACT 4 cut(s) 504, 815, 1110, 1394
SchI GAGTC 1 cut(s) 254
ScrFI CCNGG 1 cut(s) 1288
SdaI CCTGCAGG 1 cut(s) 1207
SduI GDGCHC 2 cut(s) 65, 903
SfaNI GCATC 2 cut(s) 609, 997
SfcI CTRYAG 2 cut(s) 863, 1203
Sfr303I CCGCGG 1 cut(s) 1014
SgrBI CCGCGG 1 cut(s) 1014
SinI GGWCC 3 cut(s) 635, 1209, 1555
SmlI CTYRAG 4 cut(s) 262, 495, 1073, 1252
SmoI CTYRAG 4 cut(s) 262, 495, 1073, 1252
Sse8387I CCTGCAGG 1 cut(s) 1207
Sse9I AATT 8 cut(s) 142, 350, 642, 872, 969, 1022, 1051, 1159
SspI AATATT 1 cut(s) 694
SspMI CTAG 3 cut(s) 305, 543, 1506
SstI GAGCTC 1 cut(s) 65
StyD4I CCNGG 1 cut(s) 1286
StyI CCWWGG 1 cut(s) 834
TaaI ACNGT 4 cut(s) 214, 234, 507, 1481
TaiI ACGT 4 cut(s) 135, 363, 843, 1272
TaqI TCGA 7 cut(s) 72, 202, 354, 424, 432, 737, 752
TasI AATT 8 cut(s) 142, 350, 642, 872, 969, 1022, 1051, 1159
TatI WGTACW 5 cut(s) 502, 813, 1108, 1392, 1634
TauI GCSGC 4 cut(s) 20, 80, 1013, 1336
TfiI GAWTC 4 cut(s) 116, 1436, 1691, 1712
Tru1I TTAA 1 cut(s) 696
Tru9I TTAA 1 cut(s) 696
TscAI CASTG 2 cut(s) 622, 1149
TseFI GTSAC 3 cut(s) 167, 562, 1144
TseI GCWGC 6 cut(s) 995, 998, 1126, 1416, 1502, 1540
Tsp45I GTSAC 3 cut(s) 167, 562, 1144
TspDTI ATGAA 6 cut(s) 129, 450, 533, 1343, 1683, 1704
TspRI CASTG 2 cut(s) 622, 1149
Van91I CCANNNNNTGG 3 cut(s) 617, 910, 1218
VpaK11BI GGWCC 3 cut(s) 635, 1209, 1555
VspI ATTAAT 1 cut(s) 696
XapI RAATTY 7 cut(s) 142, 350, 642, 872, 969, 1022, 1051
XceI RCATGY 2 cut(s) 1263, 1449
XcmI CCANNNNNNNNNTGG 1 cut(s) 841
XmnI GAANNNNTTC 3 cut(s) 96, 771, 815
XspI CTAG 3 cut(s) 305, 543, 1506
ZrmI AGTACT 4 cut(s) 504, 815, 1110, 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.