Rh6BG209000
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0011817
Physical Location & Seq
Forward (+)
39404688 .. 39407207
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG209000.1

Sequence Viewer

Length: 1749 bp
ATGTTAGGGAGCTCCGGCGAAGCCATGATGGTGACAGAACCAGCAGTACTACTTCATGAAGGCAGCAGTACTACTACTGAAACCGCGGCCGCACTTTTGTCGAATTCAGGTGAAGAAGATCATCACAAGCATACTTCTGGCGACGTTGATCATGAGGGTGGTCATGATGACGACCACCGGAGCTATGGAGGAGGAGGAGGAGGAAACCGGTGGCCGCGCCAAGAAACTTTGGCACTCCTGAAGATAAGGTCTCAAATGGATGCTGCTTTTCGCGACTCCAGTCTCAAAGCTCCATTGTGGGAAGATATTTCAAGGAAACTAGGGGAGCTTGGTTATTACAGAAGTGCCAAGAAATGCAAGGAGAAATTCGAGAACGTGTACAAGTACCACAGAAGGACCAAAGAAGGCCGATCTGGAAAGCCAGAAGGAAAGACTTATCGGTTTTTTGACGAACTTGAAGCTTTTGATCGTCATCAGAATAGTCACCATCCATCAATAATACCACCAAAACCGCCAGTGGTGCCGTGGACCAACAACAACCACCACCATCCAAACCAAACTGTCCCTCCTGTCGTCACTGTTCCGCAAAACGGCGTCACTCCAGCCACAGATCCAATCATTCATTCATCAACAAACAATTTTTCACGGCCACAGCAAATTCAAGCATCACAAGATAATACTAATGGATTCCGACTATTAAATCCGACCAATCTGTTCTCTAGCTCTACATCTTCTACTACTGCCTCAGACGAAGAGTTTCAGCAACGAAACAAGAGGAAAAGGAAATGGAAATACTTCTTCAGAAGACTAACAAAGCAAGTTCTCGAGAAGCAGGAGAAGCTGCAAGAAACGTTCTTGGAAGCCATTACCAAATGCGATCAAGAACGAATGGTGAAAGAAGAAGCTTTGAGAATGCAAGAGATGGCAAGAATCGATCGGGAACACGAGATTTTAGTCCAAGAGAGATCGACAGCGGCAGCTAAAGACACCGCCCTCATACAATTCTTGCAGAAGGTTTCGTTGCAACATAACTCGAATGATAATCGATCACTCGAAATCACTGATGCCGCAATACTAGTAGTACCACCAACAAATGTGCCTCGGCCATTGCCAGCACTACCGGTGTCTTGGGCAACGGACCAACGTGGCGTCACTACTAGTTCTGATTTAGCACCGAGAACTTTGGAGGCTAAGAAAGTGTATAGTAACGGCGAAAACAATTCTGTTCTAGCTGCTGTTGGGTCCTCAAGATGGCCGAAAACGGAAGTTCAAGCATTGATAAATCTTAGGACAAGTCTTGATGTCAAGTATCATGAAGCTGGGCCAAAAGGGTCTCTGTGGGAGGAGATATCGGCCGGGATGAGGAGGCTCGGCTACAATCGGAGCTCGAAGAGGTGCAAGGAGAAATGGGAGAACATCAACAAATACTTCAAGAAGGTCAAGGAGAGCAGCAAAACGAGACCCGAAGATTCAAAAACATGTCCTTACTTTCACCAGCTTGAAGCCTTGTACAAAAAGAAGAACAAGAAGATTGAATATCACAAGTCGAGCATTGACGATCGTAGTGTTGACAAGCTCCAAATAATGCAGCCACTGAGGGAAAATGTGGATCCAAATCAAGAGGAAGATGAACATGATCATGGTGAAGATGGAGAAAGTACGGAGGAAGATCAAGAACATGATAATGATCATGGCCAGGTATATAGGGATAGTAACAAATTACAAACCGACACCAATGGAGATGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

582

Amino Acids

66.24

Weight (kDa)

6.8

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 69 - 154 2.2e-22 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 416 - 503 3.1e-24 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011817)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76890
fragaria_vesca FvH4_2g13840
malus_domestica MD05G1024500.v1.1 MD10G1025200.v1.1
prunus_persica Prupe.8G028800_v2.0.a1 Prupe.8G028800_v2.0.a1
pyrus_communis pycom05g01570 pycom10g01660
rosa_chinensis RchiOBHm_Chr6g0275491
rosa_laevigata RLG00000013460
rosa_multiflora Rmu_sc0006527.1_g000008 Rmu_sc0033082.1_g000001
rosa_roxburghii Rroxscaffold_7G00193230
rosa_rugosa Rorug06G0093300
rosa_samantha Rh6AG206000 Rh6BG209000 Rh6CG211200 Rh6DG201500
rosa_wichuraiana Rw6G017870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 520
AccII CGCG 3 cut(s) 86, 217, 273
AciI CCGC 9 cut(s) 84, 86, 90, 215, 512, 584, 974, 990, 1068
AclI AACGTT 1 cut(s) 851
AclWI GGATC 3 cut(s) 605, 1604, 1617
AcoI YGGCCR 7 cut(s) 87, 212, 647, 1103, 1253, 1353, 1693
AcsI RAATTY 3 cut(s) 103, 365, 657
AcuI CTGAAG 2 cut(s) 260, 784
AcyI GRCGYC 2 cut(s) 594, 1149
AfaI GTAC 7 cut(s) 48, 70, 380, 386, 1083, 1511, 1660
AfiI CCNNNNNNNGG 3 cut(s) 590, 1251, 1362
AflIII ACRYGT 2 cut(s) 375, 1478
AgeI ACCGGT 2 cut(s) 207, 1120
AgsI TTSAA 8 cut(s) 312, 458, 662, 1271, 1432, 1473, 1502, 1535
AhlI ACTAGT 2 cut(s) 1075, 1157
AjnI CCWGG 1 cut(s) 1695
AjuI GAANNNNNNNTTGG 2 cut(s) 607, 639
Alw21I GWGCWC 2 cut(s) 14, 1388
Alw26I GTCTC 4 cut(s) 255, 287, 1338, 1453
AlwI GGATC 3 cut(s) 605, 1604, 1617
AlwNI CAGNNNCTG 1 cut(s) 1594
Ama87I CYCGRG 1 cut(s) 824
AoxI GGCC 9 cut(s) 87, 212, 406, 647, 1103, 1253, 1322, 1353, 1693
ApeKI GCWGC 7 cut(s) 63, 263, 841, 977, 1232, 1449, 1588
ApoI RAATTY 3 cut(s) 103, 365, 657
AsiGI ACCGGT 2 cut(s) 207, 1120
Asp700I GAANNNNTTC 2 cut(s) 756, 794
AspLEI GCGC 1 cut(s) 219
AspS9I GGNCC 5 cut(s) 396, 528, 1138, 1242, 1322
AsuC2I CCSGG 1 cut(s) 1357
AsuHPI GGTGA 6 cut(s) 43, 122, 476, 904, 1484, 1655
AvaI CYCGRG 1 cut(s) 824
AvaII GGWCC 4 cut(s) 396, 528, 1138, 1242
BalI TGGCCA 1 cut(s) 1695
BamHI GGATCC 1 cut(s) 1609
BanI GGYRCC 1 cut(s) 520
BanII GRGCYC 2 cut(s) 14, 1388
BauI CACGAG 1 cut(s) 944
BbsI GAAGAC 1 cut(s) 811
Bbv12I GWGCWC 2 cut(s) 14, 1388
BbvI GCAGC 7 cut(s) 75, 250, 828, 989, 1219, 1461, 1600
BccI CCATC 8 cut(s) 22, 495, 499, 555, 916, 1245, 1643, 1736
BceAI ACGGC 4 cut(s) 508, 607, 662, 1225
BcgI CGANNNNNNTGC 2 cut(s) 81, 115
BciT130I CCWGG 1 cut(s) 1697
BclI TGATCA 3 cut(s) 148, 1636, 1687
BcnI CCSGG 1 cut(s) 1357
BcoDI GTCTC 4 cut(s) 255, 287, 1338, 1453
BcuI ACTAGT 2 cut(s) 1075, 1157
BfaI CTAG 5 cut(s) 320, 720, 1076, 1158, 1229
BmcAI AGTACT 2 cut(s) 48, 70
Bme1390I CCNGG 2 cut(s) 1357, 1697
Bme18I GGWCC 4 cut(s) 396, 528, 1138, 1242
BmeT110I CYCGRG 1 cut(s) 824
BmgT120I GGNCC 5 cut(s) 396, 528, 1138, 1242, 1322
BmiI GGNNCC 3 cut(s) 522, 1243, 1611
BmrFI CCNGG 2 cut(s) 1357, 1697
BmsI GCATC 3 cut(s) 250, 674, 1054
BoxI GACNNNNGTC 1 cut(s) 279
BpiI GAAGAC 1 cut(s) 811
BpmI CTGGAG 2 cut(s) 262, 585
BpuEI CTTGAG 1 cut(s) 1231
BpuMI CCSGG 1 cut(s) 1357
Bsa29I ATCGAT 2 cut(s) 933, 1045
BsaBI GATNNNNATC 3 cut(s) 471, 1614, 1686
BsaHI GRCGYC 2 cut(s) 594, 1149
BsaI GGTCTC 3 cut(s) 255, 1338, 1453
BsaJI CCNNGG 3 cut(s) 84, 524, 1100
BsaWI WCCGGW 3 cut(s) 177, 207, 1120
BsaXI ACNNNNNCTCC 2 cut(s) 550, 580
Bsc4I CCNNNNNNNGG 3 cut(s) 590, 1251, 1362
Bse118I RCCGGY 2 cut(s) 207, 1120
Bse1I ACTGG 2 cut(s) 279, 515
Bse3DI GCAATG 1 cut(s) 1106
Bse8I GATNNNNATC 3 cut(s) 471, 1614, 1686
BseBI CCWGG 1 cut(s) 1697
BseCI ATCGAT 2 cut(s) 933, 1045
BseDI CCNNGG 3 cut(s) 84, 524, 1100
BseGI GGATG 4 cut(s) 265, 487, 547, 1365
BseJI GATNNNNATC 3 cut(s) 471, 1614, 1686
BseLI CCNNNNNNNGG 3 cut(s) 590, 1251, 1362
BseMI GCAATG 1 cut(s) 1106
BseMII CTCAG 2 cut(s) 759, 1586
BseNI ACTGG 2 cut(s) 279, 515
BseRI GAGGAG 6 cut(s) 204, 207, 210, 213, 1358, 1378
BseX3I CGGCCG 2 cut(s) 87, 1353
BseXI GCAGC 7 cut(s) 75, 250, 828, 989, 1219, 1461, 1600
BseYI CCCAGC 1 cut(s) 1319
Bsh1236I CGCG 3 cut(s) 86, 217, 273
Bsh1285I CGRYCG 4 cut(s) 90, 937, 1356, 1561
BshFI GGCC 9 cut(s) 89, 214, 408, 649, 1105, 1255, 1324, 1355, 1695
BshNI GGYRCC 1 cut(s) 520
BshTI ACCGGT 2 cut(s) 207, 1120
BshVI ATCGAT 2 cut(s) 933, 1045
BsiEI CGRYCG 4 cut(s) 90, 937, 1356, 1561
BsiHKAI GWGCWC 2 cut(s) 14, 1388
BsiHKCI CYCGRG 1 cut(s) 824
BsiSI CCGG 5 cut(s) 15, 178, 208, 1121, 1356
BslFI GGGAC 1 cut(s) 548
BslI CCNNNNNNNGG 3 cut(s) 590, 1251, 1362
BsmAI GTCTC 4 cut(s) 255, 287, 1338, 1453
BsmFI GGGAC 1 cut(s) 548
BsmI GAATGC 1 cut(s) 918
BsnI GGCC 9 cut(s) 89, 214, 408, 649, 1105, 1255, 1324, 1355, 1695
Bso31I GGTCTC 3 cut(s) 255, 1338, 1453
BsoBI CYCGRG 1 cut(s) 824
Bsp1286I GDGCHC 2 cut(s) 14, 1388
Bsp1407I TGTACA 2 cut(s) 378, 1509
Bsp68I TCGCGA 1 cut(s) 273
BspACI CCGC 9 cut(s) 84, 86, 90, 215, 512, 584, 974, 990, 1068
BspANI GGCC 9 cut(s) 89, 214, 408, 649, 1105, 1255, 1324, 1355, 1695
BspCNI CTCAG 2 cut(s) 758, 1587
BspDI ATCGAT 2 cut(s) 933, 1045
BspFNI CGCG 3 cut(s) 86, 217, 273
BspHI TCATGA 4 cut(s) 55, 151, 163, 1312
BspLI GGNNCC 3 cut(s) 522, 1243, 1611
BspPI GGATC 3 cut(s) 605, 1604, 1617
BspT107I GGYRCC 1 cut(s) 520
BspTNI GGTCTC 3 cut(s) 255, 1338, 1453
BsrDI GCAATG 1 cut(s) 1106
BsrFI RCCGGY 2 cut(s) 207, 1120
BsrGI TGTACA 2 cut(s) 378, 1509
BsrI ACTGG 2 cut(s) 279, 515
BssAI RCCGGY 2 cut(s) 207, 1120
BssECI CCNNGG 3 cut(s) 84, 524, 1100
BssNI GRCGYC 2 cut(s) 594, 1149
BssSI CACGAG 1 cut(s) 944
Bst2BI CACGAG 1 cut(s) 944
Bst2UI CCWGG 1 cut(s) 1697
Bst4CI ACNGT 2 cut(s) 562, 580
Bst6I CTCTTC 2 cut(s) 747, 1385
BstACI GRCGYC 2 cut(s) 594, 1149
BstAUI TGTACA 2 cut(s) 378, 1509
BstC8I GCNNGC 1 cut(s) 1113
BstDEI CTNAG 4 cut(s) 745, 1191, 1286, 1595
BstDSI CCRYGG 2 cut(s) 84, 524
BstF5I GGATG 4 cut(s) 265, 487, 547, 1365
BstFNI CGCG 3 cut(s) 86, 217, 273
BstHHI GCGC 1 cut(s) 219
BstMAI GTCTC 4 cut(s) 255, 287, 1338, 1453
BstMCI CGRYCG 4 cut(s) 90, 937, 1356, 1561
BstMWI GCNNNNNNNGC 2 cut(s) 520, 838
BstNI CCWGG 1 cut(s) 1697
BstNSI RCATGY 1 cut(s) 1482
BstPAI GACNNNNGTC 1 cut(s) 279
BstSCI CCNGG 2 cut(s) 1355, 1695
BstUI CGCG 3 cut(s) 86, 217, 273
BstV1I GCAGC 7 cut(s) 75, 250, 828, 989, 1219, 1461, 1600
BstV2I GAAGAC 1 cut(s) 811
BstX2I RGATCY 2 cut(s) 610, 1609
BstYI RGATCY 2 cut(s) 610, 1609
BstZI CGGCCG 2 cut(s) 87, 1353
Bsu15I ATCGAT 2 cut(s) 933, 1045
BsuRI GGCC 9 cut(s) 89, 214, 408, 649, 1105, 1255, 1324, 1355, 1695
BsuTUI ATCGAT 2 cut(s) 933, 1045
BtgI CCRYGG 2 cut(s) 84, 524
BtsCI GGATG 4 cut(s) 265, 487, 547, 1365
BtsIMutI CAGTG 4 cut(s) 522, 576, 1059, 1592
BtuMI TCGCGA 1 cut(s) 273
Cac8I GCNNGC 1 cut(s) 1113
CaiI CAGNNNCTG 1 cut(s) 1594
CciI TCATGA 4 cut(s) 55, 151, 163, 1312
CciNI GCGGCCGC 1 cut(s) 87
CfoI GCGC 1 cut(s) 219
Cfr10I RCCGGY 2 cut(s) 207, 1120
Cfr13I GGNCC 5 cut(s) 396, 528, 1138, 1242, 1322
Cfr42I CCGCGG 1 cut(s) 87
ClaI ATCGAT 2 cut(s) 933, 1045
CseI GACGC 2 cut(s) 583, 1138
Csp6I GTAC 7 cut(s) 47, 69, 379, 385, 1082, 1510, 1659
CspAI ACCGGT 2 cut(s) 207, 1120
CviQI GTAC 7 cut(s) 47, 69, 379, 385, 1082, 1510, 1659
DdeI CTNAG 4 cut(s) 745, 1191, 1286, 1595
EaeI YGGCCR 7 cut(s) 87, 212, 647, 1103, 1253, 1353, 1693
EagI CGGCCG 2 cut(s) 87, 1353
Eam1104I CTCTTC 2 cut(s) 747, 1385
EarI CTCTTC 2 cut(s) 747, 1385
Ecl136II GAGCTC 2 cut(s) 12, 1386
EclXI CGGCCG 2 cut(s) 87, 1353
Eco24I GRGCYC 2 cut(s) 14, 1388
Eco31I GGTCTC 3 cut(s) 255, 1338, 1453
Eco32I GATATC 1 cut(s) 1350
Eco47I GGWCC 4 cut(s) 396, 528, 1138, 1242
Eco52I CGGCCG 2 cut(s) 87, 1353
Eco53kI GAGCTC 2 cut(s) 12, 1386
Eco57I CTGAAG 2 cut(s) 260, 784
Eco88I CYCGRG 1 cut(s) 824
EcoICRI GAGCTC 2 cut(s) 12, 1386
EcoO109I RGGNCCY 1 cut(s) 1242
EcoRI GAATTC 1 cut(s) 103
EcoRII CCWGG 1 cut(s) 1695
EcoRV GATATC 1 cut(s) 1350
EcoT38I GRGCYC 2 cut(s) 14, 1388
FaqI GGGAC 1 cut(s) 548
FbaI TGATCA 3 cut(s) 148, 1636, 1687
FokI GGATG 4 cut(s) 272, 474, 534, 1372
FriOI GRGCYC 2 cut(s) 14, 1388
FspBI CTAG 5 cut(s) 320, 720, 1076, 1158, 1229
GlaI GCGC 1 cut(s) 218
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 2 cut(s) 262, 585
HaeIII GGCC 9 cut(s) 89, 214, 408, 649, 1105, 1255, 1324, 1355, 1695
HapII CCGG 5 cut(s) 15, 178, 208, 1121, 1356
HgaI GACGC 2 cut(s) 583, 1138
HhaI GCGC 1 cut(s) 219
Hin1I GRCGYC 2 cut(s) 594, 1149
Hin6I GCGC 1 cut(s) 217
HinP1I GCGC 1 cut(s) 217
HincII GTYRAC 1 cut(s) 1570
HindII GTYRAC 1 cut(s) 1570
HindIII AAGCTT 2 cut(s) 459, 903
HinfI GANTC 4 cut(s) 275, 687, 930, 1469
HpaII CCGG 5 cut(s) 15, 178, 208, 1121, 1356
HphI GGTGA 6 cut(s) 43, 122, 476, 904, 1484, 1655
Hpy166II GTNNAC 3 cut(s) 379, 528, 1570
Hpy188I TCNGA 7 cut(s) 477, 692, 705, 748, 803, 1165, 1383
Hpy8I GTNNAC 3 cut(s) 379, 528, 1570
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 6 cut(s) 53, 387, 398, 419, 1006, 1429
HpyCH4III ACNGT 2 cut(s) 562, 580
HpyCH4IV ACGT 4 cut(s) 144, 375, 851, 1144
HpyCH4V TGCA 7 cut(s) 357, 844, 916, 1009, 1024, 1398, 1588
HpyF10VI GCNNNNNNNGC 2 cut(s) 520, 838
HpyF3I CTNAG 4 cut(s) 745, 1191, 1286, 1595
HpySE526I ACGT 4 cut(s) 144, 375, 851, 1144
Hsp92I GRCGYC 2 cut(s) 594, 1149
HspAI GCGC 1 cut(s) 217
Ksp22I TGATCA 3 cut(s) 148, 1636, 1687
KspI CCGCGG 1 cut(s) 87
LmnI GCTCC 7 cut(s) 9, 17, 180, 295, 325, 1383, 1581
Lsp1109I GCAGC 7 cut(s) 75, 250, 828, 989, 1219, 1461, 1600
LweI GCATC 3 cut(s) 250, 674, 1054
MaeI CTAG 5 cut(s) 320, 720, 1076, 1158, 1229
MaeII ACGT 4 cut(s) 144, 375, 851, 1144
MaeIII GTNAC 7 cut(s) 31, 482, 574, 595, 1150, 1205, 1712
MflI RGATCY 2 cut(s) 610, 1609
MhlI GDGCHC 2 cut(s) 14, 1388
MlsI TGGCCA 1 cut(s) 1695
MluCI AATT 7 cut(s) 103, 365, 637, 657, 1001, 1219, 1718
MluNI TGGCCA 1 cut(s) 1695
MlyI GAGTC 1 cut(s) 269
MmeI TCCRAC 2 cut(s) 715, 728
Mox20I TGGCCA 1 cut(s) 1695
MroXI GAANNNNTTC 2 cut(s) 756, 794
MscI TGGCCA 1 cut(s) 1695
MseI TTAA 1 cut(s) 698
MslI CAYNNNNRTG 4 cut(s) 29, 156, 1638, 1683
Msp20I TGGCCA 1 cut(s) 1695
MspA1I CMGCKG 2 cut(s) 86, 974
MspI CCGG 5 cut(s) 15, 178, 208, 1121, 1356
MspR9I CCNGG 2 cut(s) 1357, 1697
Mva1269I GAATGC 1 cut(s) 918
MvaI CCWGG 1 cut(s) 1697
MvnI CGCG 3 cut(s) 86, 217, 273
MwoI GCNNNNNNNGC 2 cut(s) 520, 838
NciI CCSGG 1 cut(s) 1357
NlaIV GGNNCC 3 cut(s) 522, 1243, 1611
NmeAIII GCCGAG 2 cut(s) 1081, 1350
NmuCI GTSAC 5 cut(s) 31, 482, 574, 595, 1150
NotI GCGGCCGC 1 cut(s) 87
NruI TCGCGA 1 cut(s) 273
NspI RCATGY 1 cut(s) 1482
PaeR7I CTCGAG 1 cut(s) 824
PagI TCATGA 4 cut(s) 55, 151, 163, 1312
PciI ACATGT 1 cut(s) 1478
PctI GAATGC 1 cut(s) 918
PdmI GAANNNNTTC 2 cut(s) 756, 794
PfeI GAWTC 3 cut(s) 687, 930, 1469
PinAI ACCGGT 2 cut(s) 207, 1120
Ple19I CGATCG 2 cut(s) 937, 1561
PleI GAGTC 1 cut(s) 269
PpsI GAGTC 1 cut(s) 269
PpuMI RGGWCCY 1 cut(s) 1242
PscI ACATGT 1 cut(s) 1478
PshAI GACNNNNGTC 1 cut(s) 279
Psp124BI GAGCTC 2 cut(s) 14, 1388
Psp1406I AACGTT 1 cut(s) 851
Psp5II RGGWCCY 1 cut(s) 1242
Psp6I CCWGG 1 cut(s) 1695
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 1 cut(s) 1695
PspN4I GGNNCC 3 cut(s) 522, 1243, 1611
PspPI GGNCC 5 cut(s) 396, 528, 1138, 1242, 1322
PspPPI RGGWCCY 1 cut(s) 1242
PsrI GAACNNNNNNTAC 2 cut(s) 30, 62
PstNI CAGNNNCTG 1 cut(s) 1594
PsuI RGATCY 2 cut(s) 610, 1609
PvuI CGATCG 2 cut(s) 937, 1561
RruI TCGCGA 1 cut(s) 273
RsaI GTAC 7 cut(s) 48, 70, 380, 386, 1083, 1511, 1660
RsaNI GTAC 7 cut(s) 47, 69, 379, 385, 1082, 1510, 1659
RseI CAYNNNNRTG 4 cut(s) 29, 156, 1638, 1683
SacI GAGCTC 2 cut(s) 14, 1388
SacII CCGCGG 1 cut(s) 87
SaqAI TTAA 1 cut(s) 698
Sau96I GGNCC 5 cut(s) 396, 528, 1138, 1242, 1322
ScaI AGTACT 2 cut(s) 48, 70
SchI GAGTC 1 cut(s) 269
ScrFI CCNGG 2 cut(s) 1357, 1697
SduI GDGCHC 2 cut(s) 14, 1388
SfaNI GCATC 3 cut(s) 250, 674, 1054
Sfr274I CTCGAG 1 cut(s) 824
Sfr303I CCGCGG 1 cut(s) 87
SgrBI CCGCGG 1 cut(s) 87
SinI GGWCC 4 cut(s) 396, 528, 1138, 1242
SlaI CTCGAG 1 cut(s) 824
SmiMI CAYNNNNRTG 4 cut(s) 29, 156, 1638, 1683
SmlI CTYRAG 2 cut(s) 824, 1246
SmoI CTYRAG 2 cut(s) 824, 1246
SpeI ACTAGT 2 cut(s) 1075, 1157
Sse9I AATT 7 cut(s) 103, 365, 637, 657, 1001, 1219, 1718
SsiI CCGC 9 cut(s) 84, 86, 90, 215, 512, 584, 974, 990, 1068
SspMI CTAG 5 cut(s) 320, 720, 1076, 1158, 1229
SstI GAGCTC 2 cut(s) 14, 1388
StyD4I CCNGG 2 cut(s) 1355, 1695
TaaI ACNGT 2 cut(s) 562, 580
TaiI ACGT 4 cut(s) 147, 378, 854, 1147
TasI AATT 7 cut(s) 103, 365, 637, 657, 1001, 1219, 1718
TatI WGTACW 4 cut(s) 46, 68, 378, 1509
TauI GCSGC 5 cut(s) 89, 92, 217, 977, 1070
TfiI GAWTC 3 cut(s) 687, 930, 1469
Tru1I TTAA 1 cut(s) 698
Tru9I TTAA 1 cut(s) 698
TscAI CASTG 4 cut(s) 522, 583, 1066, 1599
TseFI GTSAC 5 cut(s) 31, 482, 574, 595, 1150
TseI GCWGC 7 cut(s) 63, 263, 841, 977, 1232, 1449, 1588
Tsp45I GTSAC 5 cut(s) 31, 482, 574, 595, 1150
TspDTI ATGAA 6 cut(s) 44, 72, 611, 615, 1329, 1644
TspGWI ACGGA 3 cut(s) 1151, 1277, 1676
TspRI CASTG 4 cut(s) 522, 583, 1066, 1599
VpaK11BI GGWCC 4 cut(s) 396, 528, 1138, 1242
XapI RAATTY 3 cut(s) 103, 365, 657
XceI RCATGY 1 cut(s) 1482
XcmI CCANNNNNNNNNTGG 2 cut(s) 182, 522
XhoI CTCGAG 1 cut(s) 824
XmnI GAANNNNTTC 2 cut(s) 756, 794
XspI CTAG 5 cut(s) 320, 720, 1076, 1158, 1229
ZrmI AGTACT 2 cut(s) 48, 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.