MD10G1025200.v1.1
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0011817
Physical Location & Seq
Reverse (-)
3133957 .. 3136398
2442 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1025200.v1.1.491

Sequence Viewer

Length: 1692 bp
ATGCCTGCGCTTCCTGTGCCTGTGCCTGACAACTCATCAACCATGTTAGCATCATCAGGGGGGAGCTCCGGCGGGGAAGCGGCCACCATGGCAGAAGTGGTTCGTGAAGGTAGGCAAGAATCCGAAACGACAGACGTCTTGTCAAATTCAGTTCAAGAGGGAAACAAGGGTCACCGCTTATATGGGGGAAACCGATGGCCTCGACAAGAAACGGTGGCGCTTCTGAAGATACGGTCTCAAATGGATGCAGCTTTTCGTGACTCAAGTCTCAAAGCTCCATTGTGGGAAGATGTTTCAAGAAAGCTAGGTGAGCTTGGTTATTACCGAAGCGCTAAGAAATGCAAGGAGAAATTCGAGAACGTGTATAAGTACCACAGGAGAACCAAAGAAGGCCGGTCTAAAAAACAAGAAGGAAAAACTTATCGATTTTTCGATGAACTTGAAGCTTTCGATCATCAAAATCATCACCATTCATCAACAATAATACCAGCAAAACCTCAAGTAGTCCTGTGGCCAACCATGAACAATAACCATCCAAACAACCCTAGTCTTGTAGTTCCTCATGTCACCACTACTACTACTCTTCCTCTTTCTTCAACGTCAAGCATCATGACCCCAACAAATGGTTCTCTTCCAAATGGTCCTCAAATTTCACCACCACACATTACAAAATCACCTCTCAATCTCTCTCAGCAAAATATTAATGGTTTCAAGCCAAACTCGGCAACAAACAATCTTTTTTCGAGCTCTACTTCCTCGTCTGCCTCTGATGAAGAGTTTCAAGTTCAACCCCGTGACAAGAGAAAAATGAAGTGGAGGTACTTCTTCAAAAGGATGACCAAGGACGTGCTGGAGAAGCAAGAGAAGCTGCAGGAGAAATTCTTAGAAGCCATAGCGAAGTGCGAGCACCAACGAATGGTGAGAGAAGCAGCTTGGAGGAAGGAAGAGATGGCGAGAATGAGTAAAGAGCACGAAATTTTAGCCCAAGAAAGATCATTAGCAGCGGCACAAGATGCCGCGGTAATTGAATTCTTGCAAAAGTTTTCGGGGCAACAAAACTCAACAAGTATTCAAGCACTCGAGGCACCATCATCACGGCCCCATCCACTGCCAGTACTAATGCCACCACCGCTGCAGGCTCCGGTGGCAGTGGTCACAAGTAGTACTTTTGACGTTCCGAAACTGGATAACAGTGAAAGTCCACTTCCTGCAGGATCTACAAGATGGCCGAGAGTTGAAGTTGAAGCTTTGATAAACTTGAGGACATATCTTGACGTGAAGTACCAAGAAGCCGGGCCTAAAGGGTCTCTTTGGGAGGAGATATCGGCAGGGATGAGGCGGCTCGGATACAATAGGAGTGCAAAGAGGTGCAAAGAAAAGTGGGAGAACATCAACAAGTACTACAAGAAGGTGAAGGTGAGCAGCAAAACGCGGTCTGAGGGTTCAAAAACATGTCCATATTTTCACCAGCTGGACATCTTGCACAGTAAAAAGAACAATAAGAATAATGCTGGTCATGTGGTGAAGCCCAATGCTGAAACAATGCAGCCATTGATCAATGTCCAGCCAGACCAGCCAGCAATTGAAGATATCGAAAGGGAAAACGGGGATCGAAACGAAGACGACGAAGATGGAGAGAGTACAGAGGAAGAAGACCGGAGTGATGACCAGATGGAGACGGTAACCAACTAG

Protein Analysis

564

Amino Acids

63.54

Weight (kDa)

8.56

Isoelectric Point (pI)

60.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 64 - 149 1.6e-21 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 407 - 492 2.9e-24 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011817)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76890
fragaria_vesca FvH4_2g13840
malus_domestica MD05G1024500.v1.1 MD10G1025200.v1.1
prunus_persica Prupe.8G028800_v2.0.a1 Prupe.8G028800_v2.0.a1
pyrus_communis pycom05g01570 pycom10g01660
rosa_chinensis RchiOBHm_Chr6g0275491
rosa_laevigata RLG00000013460
rosa_multiflora Rmu_sc0006527.1_g000008 Rmu_sc0033082.1_g000001
rosa_roxburghii Rroxscaffold_7G00193230
rosa_rugosa Rorug06G0093300
rosa_samantha Rh6AG206000 Rh6BG209000 Rh6CG211200 Rh6DG201500
rosa_wichuraiana Rw6G017870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 138
AccB1I GGYRCC 1 cut(s) 1084
AccB7I CCANNNNNTGG 2 cut(s) 623, 916
AccII CGCG 2 cut(s) 1019, 1432
AciI CCGC 9 cut(s) 72, 80, 175, 1004, 1017, 1019, 1130, 1339, 1432
AclWI GGATC 2 cut(s) 1222, 1617
AcoI YGGCCR 3 cut(s) 81, 512, 1226
AcsI RAATTY 6 cut(s) 145, 350, 648, 878, 975, 1028
AcuI CTGAAG 1 cut(s) 245
AcyI GRCGYC 1 cut(s) 135
AfaI GTAC 7 cut(s) 371, 821, 1116, 1165, 1283, 1400, 1642
AfeI AGCGCT 1 cut(s) 331
AfiI CCNNNNNNNGG 2 cut(s) 623, 916
AflIII ACRYGT 2 cut(s) 360, 1451
AhdI GACNNNNNGTC 1 cut(s) 139
AjiI CACGTC 2 cut(s) 847, 1276
AjuI GAANNNNNNNTTGG 2 cut(s) 610, 642
Alw21I GWGCWC 4 cut(s) 68, 749, 909, 972
Alw26I GTCTC 4 cut(s) 240, 272, 1311, 1670
AlwI GGATC 2 cut(s) 1222, 1617
Ama87I CYCGRG 1 cut(s) 1079
Aor51HI AGCGCT 1 cut(s) 331
AoxI GGCC 7 cut(s) 81, 197, 391, 512, 1097, 1226, 1295
ApeKI GCWGC 7 cut(s) 248, 868, 929, 1001, 1132, 1422, 1546
ApoI RAATTY 6 cut(s) 145, 350, 648, 878, 975, 1028
AseI ATTAAT 1 cut(s) 702
Asp700I GAANNNNTTC 2 cut(s) 99, 777
AspLEI GCGC 3 cut(s) 10, 220, 332
AspS9I GGNCC 3 cut(s) 641, 1098, 1295
AsuC2I CCSGG 1 cut(s) 1294
AvaI CYCGRG 1 cut(s) 1079
AvaII GGWCC 1 cut(s) 641
BalI TGGCCA 1 cut(s) 514
BanI GGYRCC 1 cut(s) 1084
BanII GRGCYC 2 cut(s) 68, 749
BarI GAAGNNNNNNTAC 2 cut(s) 803, 835
BbsI GAAGAC 2 cut(s) 1626, 1659
Bbv12I GWGCWC 4 cut(s) 68, 749, 909, 972
BbvI GCAGC 7 cut(s) 260, 855, 941, 1013, 1119, 1434, 1558
BccI CCATC 8 cut(s) 189, 540, 943, 1096, 1110, 1218, 1625, 1666
BceAI ACGGC 1 cut(s) 1112
BciVI GTATCC 1 cut(s) 1340
BclI TGATCA 1 cut(s) 1554
BcnI CCSGG 1 cut(s) 1294
BcoDI GTCTC 4 cut(s) 240, 272, 1311, 1670
BfaI CTAG 3 cut(s) 305, 546, 1690
BfmI CTRYAG 3 cut(s) 869, 1133, 1209
BfoI RGCGCY 2 cut(s) 221, 333
BfuI GTATCC 1 cut(s) 1340
BglI GCCNNNNNGGC 1 cut(s) 89
BmcAI AGTACT 3 cut(s) 1116, 1165, 1400
Bme1390I CCNGG 1 cut(s) 1294
Bme18I GGWCC 1 cut(s) 641
BmeRI GACNNNNNGTC 1 cut(s) 139
BmeT110I CYCGRG 1 cut(s) 1079
BmgBI CACGTC 2 cut(s) 847, 1276
BmgT120I GGNCC 3 cut(s) 641, 1098, 1295
BmiI GGNNCC 3 cut(s) 1086, 1100, 1140
BmrFI CCNGG 1 cut(s) 1294
BmsI GCATC 4 cut(s) 59, 235, 615, 1003
BoxI GACNNNNGTC 2 cut(s) 134, 264
BpiI GAAGAC 2 cut(s) 1626, 1659
BpmI CTGGAG 1 cut(s) 872
BpuEI CTTGAG 3 cut(s) 247, 483, 1279
BpuMI CCSGG 1 cut(s) 1294
Bsa29I ATCGAT 1 cut(s) 424
BsaHI GRCGYC 1 cut(s) 135
BsaI GGTCTC 2 cut(s) 240, 1311
BsaJI CCNNGG 3 cut(s) 87, 840, 1017
BsaWI WCCGGW 2 cut(s) 1141, 1656
Bsc4I CCNNNNNNNGG 2 cut(s) 623, 916
Bse118I RCCGGY 1 cut(s) 393
Bse1I ACTGG 2 cut(s) 1112, 1188
BseCI ATCGAT 1 cut(s) 424
BseDI CCNNGG 3 cut(s) 87, 840, 1017
BseGI GGATG 5 cut(s) 250, 532, 840, 1102, 1338
BseLI CCNNNNNNNGG 2 cut(s) 623, 916
BseMII CTCAG 2 cut(s) 704, 1428
BseNI ACTGG 2 cut(s) 1112, 1188
BseRI GAGGAG 1 cut(s) 1331
BseXI GCAGC 7 cut(s) 260, 855, 941, 1013, 1119, 1434, 1558
Bsh1236I CGCG 2 cut(s) 1019, 1432
BshFI GGCC 7 cut(s) 83, 199, 393, 514, 1099, 1228, 1297
BshNI GGYRCC 1 cut(s) 1084
BshVI ATCGAT 1 cut(s) 424
BsiHKAI GWGCWC 4 cut(s) 68, 749, 909, 972
BsiHKCI CYCGRG 1 cut(s) 1079
BsiSI CCGG 5 cut(s) 69, 394, 1142, 1293, 1657
BslI CCNNNNNNNGG 2 cut(s) 623, 916
BsmAI GTCTC 4 cut(s) 240, 272, 1311, 1670
BsmBI CGTCTC 1 cut(s) 1670
BsnI GGCC 7 cut(s) 83, 199, 393, 514, 1099, 1228, 1297
Bso31I GGTCTC 2 cut(s) 240, 1311
BsoBI CYCGRG 1 cut(s) 1079
Bsp1286I GDGCHC 4 cut(s) 68, 749, 909, 972
Bsp143I GATC 5 cut(s) 451, 992, 1214, 1554, 1609
Bsp19I CCATGG 1 cut(s) 87
BspACI CCGC 9 cut(s) 72, 80, 175, 1004, 1017, 1019, 1130, 1339, 1432
BspANI GGCC 7 cut(s) 83, 199, 393, 514, 1099, 1228, 1297
BspCNI CTCAG 2 cut(s) 703, 1429
BspDI ATCGAT 1 cut(s) 424
BspFNI CGCG 2 cut(s) 1019, 1432
BspHI TCATGA 1 cut(s) 609
BspLI GGNNCC 3 cut(s) 1086, 1100, 1140
BspMAI CTGCAG 3 cut(s) 873, 1137, 1213
BspPI GGATC 2 cut(s) 1222, 1617
BspT107I GGYRCC 1 cut(s) 1084
BspTNI GGTCTC 2 cut(s) 240, 1311
BsrFI RCCGGY 1 cut(s) 393
BsrI ACTGG 2 cut(s) 1112, 1188
BssAI RCCGGY 1 cut(s) 393
BssECI CCNNGG 3 cut(s) 87, 840, 1017
BssMI GATC 5 cut(s) 451, 992, 1214, 1554, 1609
BssNI GRCGYC 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 87, 840
Bst4CI ACNGT 5 cut(s) 214, 234, 1193, 1487, 1681
Bst6I CTCTTC 4 cut(s) 588, 636, 768, 939
BstACI GRCGYC 1 cut(s) 135
BstAPI GCANNNNNTGC 1 cut(s) 1013
BstC8I GCNNGC 4 cut(s) 6, 905, 1137, 1578
BstDEI CTNAG 4 cut(s) 333, 690, 883, 1437
BstDSI CCRYGG 2 cut(s) 87, 1017
BstEII GGTNACC 2 cut(s) 170, 1681
BstF5I GGATG 5 cut(s) 250, 532, 840, 1102, 1338
BstFNI CGCG 2 cut(s) 1019, 1432
BstH2I RGCGCY 2 cut(s) 221, 333
BstHHI GCGC 3 cut(s) 10, 220, 332
BstKTI GATC 5 cut(s) 454, 995, 1217, 1557, 1612
BstMAI GTCTC 4 cut(s) 240, 272, 1311, 1670
BstMBI GATC 5 cut(s) 451, 992, 1214, 1554, 1609
BstNSI RCATGY 1 cut(s) 1455
BstPAI GACNNNNGTC 2 cut(s) 134, 264
BstPI GGTNACC 2 cut(s) 170, 1681
BstSCI CCNGG 1 cut(s) 1292
BstSFI CTRYAG 3 cut(s) 869, 1133, 1209
BstUI CGCG 2 cut(s) 1019, 1432
BstV1I GCAGC 7 cut(s) 260, 855, 941, 1013, 1119, 1434, 1558
BstV2I GAAGAC 2 cut(s) 1626, 1659
BstX2I RGATCY 1 cut(s) 1214
BstYI RGATCY 1 cut(s) 1214
Bsu15I ATCGAT 1 cut(s) 424
BsuI GTATCC 1 cut(s) 1340
BsuRI GGCC 7 cut(s) 83, 199, 393, 514, 1099, 1228, 1297
BsuTUI ATCGAT 1 cut(s) 424
BtgI CCRYGG 2 cut(s) 87, 1017
BtrI CACGTC 2 cut(s) 847, 1276
BtsCI GGATG 5 cut(s) 250, 532, 840, 1102, 1338
BtsI GCAGTG 2 cut(s) 1106, 1155
BtsIMutI CAGTG 3 cut(s) 1106, 1155, 1198
Cac8I GCNNGC 4 cut(s) 6, 905, 1137, 1578
CciI TCATGA 1 cut(s) 609
CfoI GCGC 3 cut(s) 10, 220, 332
Cfr10I RCCGGY 1 cut(s) 393
Cfr13I GGNCC 3 cut(s) 641, 1098, 1295
Cfr42I CCGCGG 1 cut(s) 1020
ClaI ATCGAT 1 cut(s) 424
Csp6I GTAC 7 cut(s) 370, 820, 1115, 1164, 1282, 1399, 1641
CviAII CATG 7 cut(s) 43, 88, 520, 563, 610, 1452, 1517
CviQI GTAC 7 cut(s) 370, 820, 1115, 1164, 1282, 1399, 1641
DdeI CTNAG 4 cut(s) 333, 690, 883, 1437
DpnI GATC 5 cut(s) 453, 994, 1216, 1556, 1611
DpnII GATC 5 cut(s) 451, 992, 1214, 1554, 1609
DriI GACNNNNNGTC 1 cut(s) 139
EaeI YGGCCR 3 cut(s) 81, 512, 1226
Eam1104I CTCTTC 4 cut(s) 588, 636, 768, 939
Eam1105I GACNNNNNGTC 1 cut(s) 139
EarI CTCTTC 4 cut(s) 588, 636, 768, 939
Ecl136II GAGCTC 2 cut(s) 66, 747
Eco130I CCWWGG 2 cut(s) 87, 840
Eco24I GRGCYC 2 cut(s) 68, 749
Eco31I GGTCTC 2 cut(s) 240, 1311
Eco32I GATATC 2 cut(s) 1323, 1591
Eco47I GGWCC 1 cut(s) 641
Eco47III AGCGCT 1 cut(s) 331
Eco53kI GAGCTC 2 cut(s) 66, 747
Eco57I CTGAAG 1 cut(s) 245
Eco88I CYCGRG 1 cut(s) 1079
Eco91I GGTNACC 2 cut(s) 170, 1681
EcoICRI GAGCTC 2 cut(s) 66, 747
EcoO65I GGTNACC 2 cut(s) 170, 1681
EcoRI GAATTC 1 cut(s) 1028
EcoRV GATATC 2 cut(s) 1323, 1591
EcoT14I CCWWGG 2 cut(s) 87, 840
EcoT38I GRGCYC 2 cut(s) 68, 749
ErhI CCWWGG 2 cut(s) 87, 840
Esp3I CGTCTC 1 cut(s) 1670
FaeI CATG 7 cut(s) 46, 91, 523, 566, 613, 1455, 1520
FalI AAGNNNNNCTT 4 cut(s) 1150, 1182, 1293, 1325
FatI CATG 7 cut(s) 42, 87, 519, 562, 609, 1451, 1516
FauI CCCGC 1 cut(s) 65
FbaI TGATCA 1 cut(s) 1554
FokI GGATG 5 cut(s) 257, 519, 847, 1089, 1345
FriOI GRGCYC 2 cut(s) 68, 749
FspBI CTAG 3 cut(s) 305, 546, 1690
GlaI GCGC 3 cut(s) 9, 219, 331
GsuI CTGGAG 1 cut(s) 872
HaeII RGCGCY 2 cut(s) 221, 333
HaeIII GGCC 7 cut(s) 83, 199, 393, 514, 1099, 1228, 1297
HapII CCGG 5 cut(s) 69, 394, 1142, 1293, 1657
HhaI GCGC 3 cut(s) 10, 220, 332
Hin1I GRCGYC 1 cut(s) 135
Hin1II CATG 7 cut(s) 46, 91, 523, 566, 613, 1455, 1520
Hin6I GCGC 3 cut(s) 8, 218, 330
HinP1I GCGC 3 cut(s) 8, 218, 330
HindIII AAGCTT 2 cut(s) 444, 1245
HinfI GANTC 2 cut(s) 119, 260
HpaII CCGG 5 cut(s) 69, 394, 1142, 1293, 1657
Hpy166II GTNNAC 1 cut(s) 1202
Hpy188I TCNGA 6 cut(s) 124, 225, 769, 1179, 1346, 1438
Hpy188III TCNNGA 7 cut(s) 104, 155, 257, 297, 355, 610, 1271
Hpy8I GTNNAC 1 cut(s) 1202
Hpy99I CGWCG 1 cut(s) 1628
HpyAV CCTTC 6 cut(s) 101, 383, 404, 934, 1402, 1408
HpyCH4III ACNGT 5 cut(s) 214, 234, 1193, 1487, 1681
HpyCH4IV ACGT 6 cut(s) 135, 360, 599, 846, 1173, 1275
HpyF3I CTNAG 4 cut(s) 333, 690, 883, 1437
HpySE526I ACGT 6 cut(s) 135, 360, 599, 846, 1173, 1275
Hsp92I GRCGYC 1 cut(s) 135
Hsp92II CATG 7 cut(s) 46, 91, 523, 566, 613, 1455, 1520
HspAI GCGC 3 cut(s) 8, 218, 330
Ksp22I TGATCA 1 cut(s) 1554
KspI CCGCGG 1 cut(s) 1020
Kzo9I GATC 5 cut(s) 451, 992, 1214, 1554, 1609
LmnI GCTCC 4 cut(s) 63, 71, 280, 1144
Lsp1109I GCAGC 7 cut(s) 260, 855, 941, 1013, 1119, 1434, 1558
LweI GCATC 4 cut(s) 59, 235, 615, 1003
MaeI CTAG 3 cut(s) 305, 546, 1690
MaeII ACGT 6 cut(s) 135, 360, 599, 846, 1173, 1275
MaeIII GTNAC 6 cut(s) 170, 257, 565, 794, 1153, 1681
MalI GATC 5 cut(s) 453, 994, 1216, 1556, 1611
MboI GATC 5 cut(s) 451, 992, 1214, 1554, 1609
MfeI CAATTG 1 cut(s) 1581
MflI RGATCY 1 cut(s) 1214
MhlI GDGCHC 4 cut(s) 68, 749, 909, 972
MlsI TGGCCA 1 cut(s) 514
MluCI AATT 8 cut(s) 145, 350, 648, 878, 975, 1023, 1028, 1581
MluNI TGGCCA 1 cut(s) 514
MlyI GAGTC 1 cut(s) 254
Mox20I TGGCCA 1 cut(s) 514
MroXI GAANNNNTTC 2 cut(s) 99, 777
MscI TGGCCA 1 cut(s) 514
MseI TTAA 1 cut(s) 702
Msp20I TGGCCA 1 cut(s) 514
MspA1I CMGCKG 4 cut(s) 1004, 1019, 1132, 1471
MspI CCGG 5 cut(s) 69, 394, 1142, 1293, 1657
MspR9I CCNGG 1 cut(s) 1294
MunI CAATTG 1 cut(s) 1581
MvnI CGCG 2 cut(s) 1019, 1432
NciI CCSGG 1 cut(s) 1294
NcoI CCATGG 1 cut(s) 87
NdeII GATC 5 cut(s) 451, 992, 1214, 1554, 1609
NlaIII CATG 7 cut(s) 46, 91, 523, 566, 613, 1455, 1520
NlaIV GGNNCC 3 cut(s) 1086, 1100, 1140
NmeAIII GCCGAG 2 cut(s) 701, 1254
NmuCI GTSAC 5 cut(s) 170, 257, 565, 794, 1153
NspI RCATGY 1 cut(s) 1455
PaeR7I CTCGAG 1 cut(s) 1079
PagI TCATGA 1 cut(s) 609
PciI ACATGT 1 cut(s) 1451
PcsI WCGNNNNNNNCGW 1 cut(s) 1623
PdmI GAANNNNTTC 2 cut(s) 99, 777
PfeI GAWTC 1 cut(s) 119
PflMI CCANNNNNTGG 2 cut(s) 623, 916
PleI GAGTC 1 cut(s) 254
PpsI GAGTC 1 cut(s) 254
PscI ACATGT 1 cut(s) 1451
PshAI GACNNNNGTC 2 cut(s) 134, 264
PshBI ATTAAT 1 cut(s) 702
Psp124BI GAGCTC 2 cut(s) 68, 749
PspEI GGTNACC 2 cut(s) 170, 1681
PspN4I GGNNCC 3 cut(s) 1086, 1100, 1140
PspPI GGNCC 3 cut(s) 641, 1098, 1295
PspXI VCTCGAGB 1 cut(s) 1079
PstI CTGCAG 3 cut(s) 873, 1137, 1213
PsuI RGATCY 1 cut(s) 1214
PvuII CAGCTG 1 cut(s) 1471
RsaI GTAC 7 cut(s) 371, 821, 1116, 1165, 1283, 1400, 1642
RsaNI GTAC 7 cut(s) 370, 820, 1115, 1164, 1282, 1399, 1641
SacI GAGCTC 2 cut(s) 68, 749
SacII CCGCGG 1 cut(s) 1020
SaqAI TTAA 1 cut(s) 702
Sau3AI GATC 5 cut(s) 451, 992, 1214, 1554, 1609
Sau96I GGNCC 3 cut(s) 641, 1098, 1295
SbfI CCTGCAGG 1 cut(s) 1213
ScaI AGTACT 3 cut(s) 1116, 1165, 1400
SchI GAGTC 1 cut(s) 254
ScrFI CCNGG 1 cut(s) 1294
SdaI CCTGCAGG 1 cut(s) 1213
SduI GDGCHC 4 cut(s) 68, 749, 909, 972
SfaNI GCATC 4 cut(s) 59, 235, 615, 1003
SfcI CTRYAG 3 cut(s) 869, 1133, 1209
Sfr274I CTCGAG 1 cut(s) 1079
Sfr303I CCGCGG 1 cut(s) 1020
SgrBI CCGCGG 1 cut(s) 1020
SinI GGWCC 1 cut(s) 641
SlaI CTCGAG 1 cut(s) 1079
SmlI CTYRAG 4 cut(s) 262, 498, 1079, 1258
SmoI CTYRAG 4 cut(s) 262, 498, 1079, 1258
Sse8387I CCTGCAGG 1 cut(s) 1213
Sse9I AATT 8 cut(s) 145, 350, 648, 878, 975, 1023, 1028, 1581
SsiI CCGC 9 cut(s) 72, 80, 175, 1004, 1017, 1019, 1130, 1339, 1432
SspI AATATT 1 cut(s) 700
SspMI CTAG 3 cut(s) 305, 546, 1690
SstI GAGCTC 2 cut(s) 68, 749
StyD4I CCNGG 1 cut(s) 1292
StyI CCWWGG 2 cut(s) 87, 840
TaaI ACNGT 5 cut(s) 214, 234, 1193, 1487, 1681
TaiI ACGT 6 cut(s) 138, 363, 602, 849, 1176, 1278
TaqI TCGA 9 cut(s) 202, 354, 424, 432, 450, 743, 1080, 1593, 1612
TasI AATT 8 cut(s) 145, 350, 648, 878, 975, 1023, 1028, 1581
TatI WGTACW 4 cut(s) 1114, 1163, 1398, 1640
TauI GCSGC 4 cut(s) 83, 1007, 1019, 1342
TfiI GAWTC 1 cut(s) 119
Tru1I TTAA 1 cut(s) 702
Tru9I TTAA 1 cut(s) 702
TscAI CASTG 3 cut(s) 1113, 1155, 1198
TseFI GTSAC 5 cut(s) 170, 257, 565, 794, 1153
TseI GCWGC 7 cut(s) 248, 868, 929, 1001, 1132, 1422, 1546
Tsp45I GTSAC 5 cut(s) 170, 257, 565, 794, 1153
TspDTI ATGAA 5 cut(s) 450, 462, 536, 786, 824
TspRI CASTG 3 cut(s) 1113, 1155, 1198
Van91I CCANNNNNTGG 2 cut(s) 623, 916
VpaK11BI GGWCC 1 cut(s) 641
VspI ATTAAT 1 cut(s) 702
XapI RAATTY 6 cut(s) 145, 350, 648, 878, 975, 1028
XceI RCATGY 1 cut(s) 1455
XcmI CCANNNNNNNNNTGG 2 cut(s) 94, 847
XhoI CTCGAG 1 cut(s) 1079
XmnI GAANNNNTTC 2 cut(s) 99, 777
XspI CTAG 3 cut(s) 305, 546, 1690
ZraI GACGTC 1 cut(s) 136
ZrmI AGTACT 3 cut(s) 1116, 1165, 1400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.