Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0007627

Physical Location & Seq

Genomic Coordinates Reverse (-)

20637934 .. 20643768

Gene Structure 5835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1099000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGATGGAGCTGCAGAGATCAGCAGCGCTGAGATTCTTTCTAGGGTTTCTGCTGCTGTCTATGGCGAATGGGAGATTCGTGGTGGAGAAGAACAGCTTGAGGGTCACATCCCCGGATAAAATCAAGGGCACGTACGACAGTGCCATTGGCAACTTCGGGATTCCTCAGTACGGCGGCAGCATGGCCGGCGCCGTGGTGTATCCGAAGGAGAATCAGAAGGGATGCAAGGAGTTTTCTGAATTTGGGATTACGTTTAAATCGAGCCCCGGAGCTCTCCCAACTTTCGTTTTGGTCGATCGTGGAGATTGCTTCTTTGCCTTGAAGGTTTGGAATGCCCAGAAAGCTGGGGCTTCTGCAGTTCTTGTTGCTGATAATATTGAGGAGGCATTGATAACCATGGACTCACCCGAAGAGGATGGTTCAACTTCCAAATACATTGAGAACATAACAATACCATCTGCGCTCATTGAAAAAAGGTTTGGCGAAATTTTAAAGAAAGCAATCAGTGCTGGTGATATGGTCAATGTGAATCTTGACTGGAGAGAAGCTGTTCCACATCCAGATGATCGTGTGGAATATGAACTGTGGACCAACAGCAACGATGAATGTGGGGTTAAATGTGACATGTTGATGGAATTTATGAAGGATTTTAGGGGTGCAGCCCAAATACTTGAAAAAGGCGGTTACACTCAGTTCACACCTCATTATATAACTTGGTACTGTCCTCGGGCATTTACTTTAAGCAAACAGTGCAAGTCTCAGTGCATCAATCATGGAAGATATTGTGCTCCTGATCCAGAACAAGACTTCAGCAGTGGTTACGATGGGAAAGATGTGGTTCTTGAAAATTTAAGGCAGCTATGTGTTTTTAGAGTGGCAAATGAGACCAAAAAGCCTTGGGTATGGTGGGACTACGTAACTGATTTTCAAATTAGATGTCCCATGAAGGAGAAAAAGTACAACAAGGAATGTGCTGATGGTGTCATTAAATCTCTTGGGCTTGATATTAAGAAGATTGAGAGTTGTATGGGAGACCCTAATGCGGACTCAGAAAATACTGTTCTGAAAGAAGAGCAAGATGCTCAGGTTGGGAAAGGAACAAGAGGTGATGTAACCATATTGCCTACCGTTGTTGTCAATAATCACCAATACCGAGGCAAGTTGGAGAAAGGTGCAGTTCTGAAAGCCATCTGTTCTGGGTTCGAGGAAACTACTGAGCCAGCTGTTTGTTTGAGTACTGATGTGGAGACGAATGAGTGCTTGGATAATAATGGTGGTTGCTGGCAGGATAAAGCAGCCAACCTCACAGCCTGCAAGGATACATTTCGTGGGAGGGTATGTGAGTGCCCTCTGGTTGATGGTGTGCAATTTAAAGGAGATGGTTACACTACCTGTGAAGCAAGTGGGCCTGGGAGGTGCAAGGTAAACAATGGAGGTTGTTGGCATGAAGCTCGAGATGGGCATGTATTCACTGCTTGCACAGATAATGGAAAGGTCCAATGTCAGTGTCCTCCCGGGTTTAAGGGCAATGGTGTTAAAAGTTGTGAAGATATTGATGAATGCAAAGATAGGAAAGCCTGTCAGTGCCCTGAATGTAGCTGTAAAAATACCTGGGGGAGCTATGATTGCTCTTGCAGTGGGAATCTTCTGTATATCAGGGACCATGATACCTGTATAAGTAAGTCTTCTGGTGGGGGAAAGTCGTCTGCATGGGTTGCTGTGTGGGTTATTTTGATAGGGTTGGCAATGGCTGCTGGTGGGGCATACCTAGTGTACAAATACAGATTACGATCATATATGGATTCGGAGATAAGGGCCATAATGGCACAATATATGCCTTTGGACAGCCAAGCCGAAGTTCCAAATCATGTGAACGAGGAGAGGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005794 GO:0005802 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0031410 GO:0031982 GO:0031984 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA cEGF

Protein Analysis

630

Amino Acids

69.56

Weight (kDa)

5.37

Isoelectric Point (pI)

38.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	63 - 164	1.1e-15	PA domain
VSR_TRX	PF25011	191 - 398	1.2e-104	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	500 - 520	2.9e-08	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14720 AT2G14720 AT2G14740 AT2G14740 AT3G52850
fragaria_vesca	FvH4_2g04230 FvH4_2g04230 FvH4_2g04230
malus_domestica	MD05G1099000.v1.1 MD10G1105000.v1.1
prunus_persica	Prupe.8G143700_v2.0.a1 Prupe.8G143700_v2.0.a1
pyrus_communis	pycom05g09820 pycom10g09040
rosa_chinensis	RchiOBHm_Chr6g0253651
rosa_laevigata	RLG00000014996
rosa_multiflora	Rmu_sc0000331.1_g000012
rosa_roxburghii	Rroxscaffold_7G00211730
rosa_rugosa	Rorug05G0545300
rosa_samantha	Rh6AG061000 Rh6BG054800 Rh6CG054400 Rh6DG051900
rosa_wichuraiana	Rw6G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	188
AciI	CCGC	3 cut(s)	174, 681, 1043
AclWI	GGATC	1 cut(s)	788
AcoI	YGGCCR	1 cut(s)	183
AcsI	RAATTY	4 cut(s)	239, 486, 635, 847
AcuI	CTGAAG	1 cut(s)	793
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	6 cut(s)	134, 170, 719, 959, 1237, 1775
AfeI	AGCGCT	1 cut(s)	27
AfiI	CCNNNNNNNGG	2 cut(s)	170, 1042
AflIII	ACRYGT	1 cut(s)	624
AgsI	TTSAA	6 cut(s)	322, 423, 470, 674, 845, 929
AjnI	CCWGG	2 cut(s)	1408, 1610
AjuI	GAANNNNNNNTTGG	6 cut(s)	462, 494, 1244, 1276, 1842, 1874
Alw21I	GWGCWC	2 cut(s)	274, 790
Alw26I	GTCTC	4 cut(s)	762, 878, 1026, 1241
AlwI	GGATC	1 cut(s)	788
Ama87I	CYCGRG	3 cut(s)	726, 1452, 1514
Aor51HI	AGCGCT	1 cut(s)	27
AoxI	GGCC	3 cut(s)	183, 1406, 1815
ApeKI	GCWGC	8 cut(s)	10, 23, 52, 177, 659, 856, 1295, 1751
ApoI	RAATTY	4 cut(s)	239, 486, 635, 847
ArsI	GACNNNNNNTTYG	2 cut(s)	922, 954
Asp700I	GAANNNNTTC	1 cut(s)	549
AspLEI	GCGC	3 cut(s)	28, 191, 463
AspS9I	GGNCC	5 cut(s)	588, 1406, 1495, 1660, 1815
AsuC2I	CCSGG	4 cut(s)	113, 267, 1515, 1516
AsuHPI	GGTGA	4 cut(s)	396, 524, 1118, 1136
AvaI	CYCGRG	3 cut(s)	726, 1452, 1514
AvaII	GGWCC	3 cut(s)	588, 1495, 1660
BaeGI	GKGCMC	3 cut(s)	131, 1349, 1589
BanI	GGYRCC	1 cut(s)	188
BanII	GRGCYC	2 cut(s)	266, 274
BbsI	GAAGAC	1 cut(s)	1677
Bbv12I	GWGCWC	2 cut(s)	274, 790
BbvI	GCAGC	7 cut(s)	35, 39, 189, 671, 868, 1307, 1738
BccI	CCATC	9 cut(s)	410, 463, 625, 818, 971, 1196, 1352, 1373, 1451
BceAI	ACGGC	2 cut(s)	176, 187
BcgI	CGANNNNNNTGC	2 cut(s)	1433, 1467
BciT130I	CCWGG	2 cut(s)	1410, 1612
BciVI	GTATCC	2 cut(s)	210, 1312
BcnI	CCSGG	4 cut(s)	113, 267, 1515, 1516
BcoDI	GTCTC	4 cut(s)	762, 878, 1026, 1241
BfaI	CTAG	2 cut(s)	41, 1769
BfmI	CTRYAG	2 cut(s)	11, 354
BfoI	RGCGCY	2 cut(s)	29, 192
BfuI	GTATCC	2 cut(s)	210, 1312
BglI	GCCNNNNNGGC	1 cut(s)	1823
BisI	GCNGC	9 cut(s)	11, 24, 53, 175, 178, 660, 857, 1296, 1752
BlsI	GCNGC	9 cut(s)	12, 25, 54, 176, 179, 661, 858, 1297, 1753
BmcAI	AGTACT	1 cut(s)	1237
Bme1390I	CCNGG	6 cut(s)	113, 267, 1410, 1515, 1516, 1612
Bme18I	GGWCC	3 cut(s)	588, 1495, 1660
BmeT110I	CYCGRG	3 cut(s)	726, 1452, 1514
BmgT120I	GGNCC	5 cut(s)	588, 1406, 1495, 1660, 1815
BmiI	GGNNCC	2 cut(s)	190, 1661
BmrFI	CCNGG	6 cut(s)	113, 267, 1410, 1515, 1516, 1612
BmsI	GCATC	3 cut(s)	212, 774, 1069
BpiI	GAAGAC	1 cut(s)	1677
BpmI	CTGGAG	1 cut(s)	559
Bpu10I	CCTNAGC	1 cut(s)	1083
BpuEI	CTTGAG	1 cut(s)	118
BpuMI	CCSGG	4 cut(s)	113, 267, 1515, 1516
BsaAI	YACGTR	2 cut(s)	132, 916
BsaBI	GATNNNNATC	1 cut(s)	1789
BsaHI	GRCGYC	1 cut(s)	189
BsaI	GGTCTC	2 cut(s)	878, 1026
BsaXI	ACNNNNNCTCC	5 cut(s)	941, 971, 1324, 1354, 1871
Bsc4I	CCNNNNNNNGG	2 cut(s)	170, 1042
Bse118I	RCCGGY	1 cut(s)	185
Bse1I	ACTGG	1 cut(s)	542
Bse3DI	GCAATG	2 cut(s)	1534, 1752
Bse8I	GATNNNNATC	1 cut(s)	1789
BseBI	CCWGG	2 cut(s)	1410, 1612
BseGI	GGATG	4 cut(s)	107, 227, 421, 556
BseJI	GATNNNNATC	1 cut(s)	1789
BseLI	CCNNNNNNNGG	2 cut(s)	170, 1042
BseMI	GCAATG	2 cut(s)	1534, 1752
BseMII	CTCAG	7 cut(s)	20, 179, 704, 773, 1062, 1097, 1206
BseNI	ACTGG	1 cut(s)	542
BseRI	GAGGAG	1 cut(s)	395
BseSI	GKGCMC	3 cut(s)	131, 1349, 1589
BseXI	GCAGC	7 cut(s)	35, 39, 189, 671, 868, 1307, 1738
BseYI	CCCAGC	1 cut(s)	344
BsgI	GTGCAG	2 cut(s)	678, 1194
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	3 cut(s)	185, 1408, 1817
BshNI	GGYRCC	1 cut(s)	188
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	2 cut(s)	274, 790
BsiHKCI	CYCGRG	3 cut(s)	726, 1452, 1514
BsiSI	CCGG	4 cut(s)	113, 186, 267, 1515
BsiWI	CGTACG	1 cut(s)	132
BslFI	GGGAC	3 cut(s)	923, 924, 1673
BslI	CCNNNNNNNGG	2 cut(s)	170, 1042
BsmAI	GTCTC	4 cut(s)	762, 878, 1026, 1241
BsmBI	CGTCTC	1 cut(s)	1241
BsmFI	GGGAC	3 cut(s)	923, 924, 1673
BsmI	GAATGC	2 cut(s)	337, 1565
BsnI	GGCC	3 cut(s)	185, 1408, 1817
Bso31I	GGTCTC	2 cut(s)	878, 1026
BsoBI	CYCGRG	3 cut(s)	726, 1452, 1514
Bsp1286I	GDGCHC	6 cut(s)	131, 266, 274, 790, 1349, 1589
Bsp1407I	TGTACA	1 cut(s)	1773
Bsp143I	GATC	5 cut(s)	17, 295, 565, 793, 1790
Bsp19I	CCATGG	1 cut(s)	396
BspACI	CCGC	3 cut(s)	174, 681, 1043
BspANI	GGCC	3 cut(s)	185, 1408, 1817
BspCNI	CTCAG	7 cut(s)	21, 178, 703, 772, 1061, 1096, 1207
BspLI	GGNNCC	2 cut(s)	190, 1661
BspMAI	CTGCAG	2 cut(s)	15, 358
BspPI	GGATC	1 cut(s)	788
BspQI	GCTCTTC	1 cut(s)	1065
BspT107I	GGYRCC	1 cut(s)	188
BspTNI	GGTCTC	2 cut(s)	878, 1026
BsrDI	GCAATG	2 cut(s)	1534, 1752
BsrFI	RCCGGY	1 cut(s)	185
BsrGI	TGTACA	1 cut(s)	1773
BsrI	ACTGG	1 cut(s)	542
BssAI	RCCGGY	1 cut(s)	185
BssMI	GATC	5 cut(s)	17, 295, 565, 793, 1790
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	2 cut(s)	396, 896
Bst2UI	CCWGG	2 cut(s)	1410, 1612
Bst4CI	ACNGT	6 cut(s)	140, 585, 722, 750, 1060, 1129
Bst6I	CTCTTC	2 cut(s)	405, 1065
BstACI	GRCGYC	1 cut(s)	189
BstAPI	GCANNNNNTGC	4 cut(s)	506, 750, 1715, 1751
BstAUI	TGTACA	1 cut(s)	1773
BstBAI	YACGTR	2 cut(s)	132, 916
BstC8I	GCNNGC	5 cut(s)	187, 1221, 1283, 1312, 1477
BstDEI	CTNAG	7 cut(s)	29, 165, 690, 759, 1048, 1083, 1215
BstDSI	CCRYGG	2 cut(s)	192, 396
BstF5I	GGATG	4 cut(s)	107, 227, 421, 556
BstH2I	RGCGCY	2 cut(s)	29, 192
BstHHI	GCGC	3 cut(s)	28, 191, 463
BstKTI	GATC	5 cut(s)	20, 298, 568, 796, 1793
BstMAI	GTCTC	4 cut(s)	762, 878, 1026, 1241
BstMBI	GATC	5 cut(s)	17, 295, 565, 793, 1790
BstMCI	CGRYCG	1 cut(s)	298
BstMWI	GCNNNNNNNGC	9 cut(s)	186, 341, 506, 750, 1626, 1715, 1751, 1760, 1823
BstNI	CCWGG	2 cut(s)	1410, 1612
BstNSI	RCATGY	2 cut(s)	628, 1466
BstSCI	CCNGG	6 cut(s)	111, 265, 1408, 1513, 1514, 1610
BstSFI	CTRYAG	2 cut(s)	11, 354
BstSLI	GKGCMC	3 cut(s)	131, 1349, 1589
BstSNI	TACGTA	1 cut(s)	916
BstV1I	GCAGC	7 cut(s)	35, 39, 189, 671, 868, 1307, 1738
BstV2I	GAAGAC	1 cut(s)	1677
BstXI	CCANNNNNNTGG	1 cut(s)	344
BsuI	GTATCC	2 cut(s)	210, 1312
BsuRI	GGCC	3 cut(s)	185, 1408, 1817
BtgI	CCRYGG	2 cut(s)	192, 396
BtsCI	GGATG	4 cut(s)	107, 227, 421, 556
BtsI	GCAGTG	3 cut(s)	820, 1470, 1642
BtsIMutI	CAGTG	9 cut(s)	145, 511, 755, 767, 820, 1470, 1511, 1589, 1642
Cac8I	GCNNGC	5 cut(s)	187, 1221, 1283, 1312, 1477
CfoI	GCGC	3 cut(s)	28, 191, 463
Cfr10I	RCCGGY	1 cut(s)	185
Cfr13I	GGNCC	5 cut(s)	588, 1406, 1495, 1660, 1815
Cfr9I	CCCGGG	1 cut(s)	1514
Csp6I	GTAC	6 cut(s)	133, 169, 718, 958, 1236, 1774
CviQI	GTAC	6 cut(s)	133, 169, 718, 958, 1236, 1774
DdeI	CTNAG	7 cut(s)	29, 165, 690, 759, 1048, 1083, 1215
DinI	GGCGCC	1 cut(s)	190
DpnI	GATC	5 cut(s)	19, 297, 567, 795, 1792
DpnII	GATC	5 cut(s)	17, 295, 565, 793, 1790
DraI	TTTAAA	3 cut(s)	256, 492, 1372
EaeI	YGGCCR	1 cut(s)	183
Eam1104I	CTCTTC	2 cut(s)	405, 1065
EarI	CTCTTC	2 cut(s)	405, 1065
Ecl136II	GAGCTC	1 cut(s)	272
Eco105I	TACGTA	1 cut(s)	916
Eco130I	CCWWGG	2 cut(s)	396, 896
Eco24I	GRGCYC	2 cut(s)	266, 274
Eco31I	GGTCTC	2 cut(s)	878, 1026
Eco47I	GGWCC	3 cut(s)	588, 1495, 1660
Eco47III	AGCGCT	1 cut(s)	27
Eco53kI	GAGCTC	1 cut(s)	272
Eco57I	CTGAAG	1 cut(s)	793
Eco88I	CYCGRG	3 cut(s)	726, 1452, 1514
EcoICRI	GAGCTC	1 cut(s)	272
EcoRII	CCWGG	2 cut(s)	1408, 1610
EcoT14I	CCWWGG	2 cut(s)	396, 896
EcoT38I	GRGCYC	2 cut(s)	266, 274
EgeI	GGCGCC	1 cut(s)	190
EheI	GGCGCC	1 cut(s)	190
ErhI	CCWWGG	2 cut(s)	396, 896
Esp3I	CGTCTC	1 cut(s)	1241
FalI	AAGNNNNNCTT	4 cut(s)	80, 112, 1669, 1701
FaqI	GGGAC	3 cut(s)	923, 924, 1673
Fnu4HI	GCNGC	9 cut(s)	11, 24, 53, 175, 178, 660, 857, 1296, 1752
FokI	GGATG	4 cut(s)	94, 234, 428, 543
FriOI	GRGCYC	2 cut(s)	266, 274
Fsp4HI	GCNGC	9 cut(s)	11, 24, 53, 175, 178, 660, 857, 1296, 1752
FspBI	CTAG	2 cut(s)	41, 1769
GlaI	GCGC	3 cut(s)	27, 190, 462
GluI	GCNGC	9 cut(s)	11, 24, 53, 175, 178, 660, 857, 1296, 1752
GsaI	CCCAGC	1 cut(s)	348
GsuI	CTGGAG	1 cut(s)	559
HaeII	RGCGCY	2 cut(s)	29, 192
HaeIII	GGCC	3 cut(s)	185, 1408, 1817
HapII	CCGG	4 cut(s)	113, 186, 267, 1515
HhaI	GCGC	3 cut(s)	28, 191, 463
Hin1I	GRCGYC	1 cut(s)	189
Hin6I	GCGC	3 cut(s)	26, 189, 461
HinP1I	GCGC	3 cut(s)	26, 189, 461
HinfI	GANTC	9 cut(s)	33, 75, 160, 211, 401, 529, 1046, 1642, 1802
HpaII	CCGG	4 cut(s)	113, 186, 267, 1515
HphI	GGTGA	4 cut(s)	396, 524, 1118, 1136
Hpy166II	GTNNAC	5 cut(s)	588, 696, 1426, 1774, 1873
Hpy188I	TCNGA	7 cut(s)	204, 216, 238, 1051, 1065, 1182, 1807
Hpy188III	TCNNGA	7 cut(s)	157, 533, 560, 791, 797, 842, 1454
Hpy8I	GTNNAC	5 cut(s)	588, 696, 1426, 1774, 1873
HpyAV	CCTTC	5 cut(s)	199, 211, 316, 637, 940
HpyCH4III	ACNGT	6 cut(s)	140, 585, 722, 750, 1060, 1129
HpyCH4IV	ACGT	3 cut(s)	131, 251, 915
HpyF10VI	GCNNNNNNNGC	9 cut(s)	186, 341, 506, 750, 1626, 1715, 1751, 1760, 1823
HpyF3I	CTNAG	7 cut(s)	29, 165, 690, 759, 1048, 1083, 1215
HpySE526I	ACGT	3 cut(s)	131, 251, 915
Hsp92I	GRCGYC	1 cut(s)	189
HspAI	GCGC	3 cut(s)	26, 189, 461
KasI	GGCGCC	1 cut(s)	188
KroI	GCCGGC	1 cut(s)	185
KroNI	GCCGGC	1 cut(s)	187
Kzo9I	GATC	5 cut(s)	17, 295, 565, 793, 1790
LguI	GCTCTTC	1 cut(s)	1065
LmnI	GCTCC	4 cut(s)	7, 269, 793, 1617
Lsp1109I	GCAGC	7 cut(s)	35, 39, 189, 671, 868, 1307, 1738
LweI	GCATC	3 cut(s)	212, 774, 1069
MaeI	CTAG	2 cut(s)	41, 1769
MaeII	ACGT	3 cut(s)	131, 251, 915
MaeIII	GTNAC	7 cut(s)	103, 620, 683, 818, 916, 1111, 1382
MalI	GATC	5 cut(s)	19, 297, 567, 795, 1792
MboI	GATC	5 cut(s)	17, 295, 565, 793, 1790
MboII	GAAGA	8 cut(s)	100, 422, 789, 1024, 1082, 1559, 1637, 1677
MhlI	GDGCHC	6 cut(s)	131, 266, 274, 790, 1349, 1589
MluCI	AATT	6 cut(s)	239, 486, 635, 847, 930, 1367
Mly113I	GGCGCC	1 cut(s)	189
MlyI	GAGTC	2 cut(s)	395, 1040
MmeI	TCCRAC	1 cut(s)	1143
MroNI	GCCGGC	1 cut(s)	185
MroXI	GAANNNNTTC	1 cut(s)	549
MslI	CAYNNNNRTG	2 cut(s)	561, 629
MspA1I	CMGCKG	1 cut(s)	1223
MspI	CCGG	4 cut(s)	113, 186, 267, 1515
MspR9I	CCNGG	6 cut(s)	113, 267, 1410, 1515, 1516, 1612
Mva1269I	GAATGC	2 cut(s)	337, 1565
MvaI	CCWGG	2 cut(s)	1410, 1612
MwoI	GCNNNNNNNGC	9 cut(s)	186, 341, 506, 750, 1626, 1715, 1751, 1760, 1823
NaeI	GCCGGC	1 cut(s)	187
NarI	GGCGCC	1 cut(s)	189
NciI	CCSGG	4 cut(s)	113, 267, 1515, 1516
NcoI	CCATGG	1 cut(s)	396
NdeII	GATC	5 cut(s)	17, 295, 565, 793, 1790
NgoMIV	GCCGGC	1 cut(s)	185
NlaIV	GGNNCC	2 cut(s)	190, 1661
NmuCI	GTSAC	2 cut(s)	103, 620
NspI	RCATGY	2 cut(s)	628, 1466
PaeR7I	CTCGAG	1 cut(s)	1452
PciI	ACATGT	1 cut(s)	624
PciSI	GCTCTTC	1 cut(s)	1065
PcsI	WCGNNNNNNNCGW	2 cut(s)	257, 291
PctI	GAATGC	2 cut(s)	337, 1565
PdiI	GCCGGC	1 cut(s)	187
PdmI	GAANNNNTTC	1 cut(s)	549
PfeI	GAWTC	7 cut(s)	33, 75, 160, 211, 529, 1642, 1802
Pfl23II	CGTACG	1 cut(s)	132
PkrI	GCNGC	9 cut(s)	12, 25, 54, 176, 179, 661, 858, 1297, 1753
Ple19I	CGATCG	1 cut(s)	298
PleI	GAGTC	2 cut(s)	395, 1040
PluTI	GGCGCC	1 cut(s)	192
PpsI	GAGTC	2 cut(s)	395, 1040
Ppu21I	YACGTR	2 cut(s)	132, 916
PscI	ACATGT	1 cut(s)	624
Psp124BI	GAGCTC	1 cut(s)	274
Psp6I	CCWGG	2 cut(s)	1408, 1610
PspFI	CCCAGC	1 cut(s)	344
PspGI	CCWGG	2 cut(s)	1408, 1610
PspLI	CGTACG	1 cut(s)	132
PspN4I	GGNNCC	2 cut(s)	190, 1661
PspPI	GGNCC	5 cut(s)	588, 1406, 1495, 1660, 1815
PstI	CTGCAG	2 cut(s)	15, 358
PvuI	CGATCG	1 cut(s)	298
PvuII	CAGCTG	1 cut(s)	1223
RsaI	GTAC	6 cut(s)	134, 170, 719, 959, 1237, 1775
RsaNI	GTAC	6 cut(s)	133, 169, 718, 958, 1236, 1774
RseI	CAYNNNNRTG	2 cut(s)	561, 629
SacI	GAGCTC	1 cut(s)	274
SapI	GCTCTTC	1 cut(s)	1065
SatI	GCNGC	9 cut(s)	11, 24, 53, 175, 178, 660, 857, 1296, 1752
Sau3AI	GATC	5 cut(s)	17, 295, 565, 793, 1790
Sau96I	GGNCC	5 cut(s)	588, 1406, 1495, 1660, 1815
ScaI	AGTACT	1 cut(s)	1237
SchI	GAGTC	2 cut(s)	395, 1040
ScrFI	CCNGG	6 cut(s)	113, 267, 1410, 1515, 1516, 1612
SduI	GDGCHC	6 cut(s)	131, 266, 274, 790, 1349, 1589
SfaNI	GCATC	3 cut(s)	212, 774, 1069
SfcI	CTRYAG	2 cut(s)	11, 354
SfoI	GGCGCC	1 cut(s)	190
Sfr274I	CTCGAG	1 cut(s)	1452
SinI	GGWCC	3 cut(s)	588, 1495, 1660
SlaI	CTCGAG	1 cut(s)	1452
SmaI	CCCGGG	1 cut(s)	1516
SmiMI	CAYNNNNRTG	2 cut(s)	561, 629
SmlI	CTYRAG	2 cut(s)	97, 1452
SmoI	CTYRAG	2 cut(s)	97, 1452
SnaBI	TACGTA	1 cut(s)	916
Sse9I	AATT	6 cut(s)	239, 486, 635, 847, 930, 1367
SsiI	CCGC	3 cut(s)	174, 681, 1043
SspDI	GGCGCC	1 cut(s)	188
SspI	AATATT	1 cut(s)	376
SspMI	CTAG	2 cut(s)	41, 1769
SstI	GAGCTC	1 cut(s)	274
StyD4I	CCNGG	6 cut(s)	111, 265, 1408, 1513, 1514, 1610
StyI	CCWWGG	2 cut(s)	396, 896
TaaI	ACNGT	6 cut(s)	140, 585, 722, 750, 1060, 1129
TaiI	ACGT	3 cut(s)	134, 254, 918
TaqI	TCGA	4 cut(s)	260, 294, 1203, 1453
TasI	AATT	6 cut(s)	239, 486, 635, 847, 930, 1367
TatI	WGTACW	3 cut(s)	957, 1235, 1773
TauI	GCSGC	1 cut(s)	177
TfiI	GAWTC	7 cut(s)	33, 75, 160, 211, 529, 1642, 1802
TscAI	CASTG	9 cut(s)	145, 511, 755, 767, 820, 1477, 1511, 1589, 1642
TseFI	GTSAC	2 cut(s)	103, 620
TseI	GCWGC	8 cut(s)	10, 23, 52, 177, 659, 856, 1295, 1751
Tsp45I	GTSAC	2 cut(s)	103, 620
TspDTI	ATGAA	6 cut(s)	594, 618, 656, 959, 1461, 1572
TspMI	CCCGGG	1 cut(s)	1514
TspRI	CASTG	9 cut(s)	145, 511, 755, 767, 820, 1477, 1511, 1589, 1642
VpaK11BI	GGWCC	3 cut(s)	588, 1495, 1660
XapI	RAATTY	4 cut(s)	239, 486, 635, 847
XceI	RCATGY	2 cut(s)	628, 1466
XhoI	CTCGAG	1 cut(s)	1452
XmaI	CCCGGG	1 cut(s)	1514
XmnI	GAANNNNTTC	1 cut(s)	549
XspI	CTAG	2 cut(s)	41, 1769
ZrmI	AGTACT	1 cut(s)	1237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.