Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007627

Physical Location & Seq

Genomic Coordinates Forward (+)

62153707 .. 62160230

Gene Structure 6524 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00211730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGAGCTTCAGAGATCAGCGGTGGGACTCTTTCTAGGGTTTCTGGTGCTGACGATGGCGCCTTTATCGATGGGGAGGTTCGTGGTGGAGAAGAACAGCTTGAGGGTGACGTCACCGGATAAAATCAAGGGGAAATATGACAGTGCCATTGGCAACTTTGGGCTTCCTCAGTATGGAGGGAGCATGTCTGGGGCTGTTGTCTATCCAAAGGAGAATCAGAAGGGGTGTAAGGAGTTCTCGGAATTTGGGCTTTCCTACAAATCCGGTCCCGGAGCTCTGCCGACGTTTCTGTTGGTCGATCGTGGAGATTGCTTCTTTGCCTGGAAGGTTTGGAATGCCCAGAAGGCTGGAGCTTCTGCAGTCCTTGTCGCTGATGATATTGAGGAGGCGTTAATAACTATGGACACACCAGAAGAAGATATTTCAACTGCCAAATACATTGAAAACATAACTATACCATCTGCACTCATTGAAAAAAGTTTTGGTCAAACATTGAAGAAGGCCATCAGTTCTGGTGATATGGTGAATGTGTACCTTGACTGGAGAGAATCTGTTCCTCACCCAGATGACCGTGTGGAATATGAACTATGGACCAACAGTAATGATGAATGTGGGGTTAAGTGTGACATGTTGATGGAATTTACAAAGGAGTTTAGGGGGTGCAAATCTCAGTGTATCAATCATGGAAGATATTGTGCTCCTGACCCTGAACAAGACTTCAGCACTGGTTACGAAGGGAAAGATGTGGTTCTTGAAAATTTAAGGCAGCTGTGTGTTTTTAAAGTAGCAAATGAGACTCGAAAGCCTTGGGTATGGTGGGACTATGTGACTGATTTTCAAATCAGATGGCTTGATAGTAAGAAGATCGACAAGTGTATGGGAAACCCAGATGCAGACTCTGAAAATCCTGTTCTGAAAGAGGAGCAAGATGCTCAGGTTGGGAAGGGAACAAGAGGTGATGTAACCATATTGCCTACACTTGTTGTCAATAATCGACAATACCGAGGAAAGTTGGCGAAAAGTGCAGTTCTGAAGGCCATCTGTTCTGGTTTTGAAGAAACTACTGAGCCAGCTGTTTGCTTGAGTACTGATGTTGAGACAAATGAGTGTTTGGACAATAATGGTGGTTGCTGGCAAAATAAAGCTGCCAACATTACAGCCTGCAAAGGATACCTTTCGTGGGAGGCAAGTGGGCCTGGGAGGTGCAAGGTAAACAATGGAGGTTGTTGGCATGAAGCTCGAGATGGGCATGCATTCTCTGCTTGTACAGATGATGGAGGGGTGCAATGCAAGTGTCCTCCTGGGTTTAAAGGTGATGGTGTGAAAACTTGTGAAGATATTGATGAATGCAAAAGAGAAAGAAAGCCTGTCAGTGCCCTGAATGCTCCTGTAAAAATACCTGGGGAAAGTTATGACTGCTCATGTAGTGGAAATCTTTTGTATATCAAAGATCATGACACCTGCATAAGCAAGACTTCTGGAGGATCAAAATCATCTGCATGGGCTGCTGTGTGGGTTATTTTAATTGGCTTGGCTATGGCTTCTGGTGGGGCATATCTTGTGTACAAATATCGATTACGGTCATACATGGATTCAGAAATTAGAGCTATAATGGCACAGTATATGCCTCTGGACAGCCAAGCCGAAGTTCCCAATCATGTGAATGATGAGCATGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005794 GO:0005802 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0031410 GO:0031982 GO:0031984 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA cEGF

Protein Analysis

559

Amino Acids

61.62

Weight (kDa)

5.16

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	63 - 165	7.3e-14	PA domain
VSR_TRX	PF25011	192 - 219	1.8e-07	Vacuolar sorting receptor thioredoxin-like domain
VSR_TRX	PF25011	220 - 282	7.7e-32	Vacuolar sorting receptor thioredoxin-like domain
VSR_TRX	PF25011	284 - 348	3.5e-22	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	428 - 449	4.3e-08	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14720 AT2G14720 AT2G14740 AT2G14740 AT3G52850
fragaria_vesca	FvH4_2g04230 FvH4_2g04230 FvH4_2g04230
malus_domestica	MD05G1099000.v1.1 MD10G1105000.v1.1
prunus_persica	Prupe.8G143700_v2.0.a1 Prupe.8G143700_v2.0.a1
pyrus_communis	pycom05g09820 pycom10g09040
rosa_chinensis	RchiOBHm_Chr6g0253651
rosa_laevigata	RLG00000014996
rosa_multiflora	Rmu_sc0000331.1_g000012
rosa_roxburghii	Rroxscaffold_7G00211730
rosa_rugosa	Rorug05G0545300
rosa_samantha	Rh6AG061000 Rh6BG054800 Rh6CG054400 Rh6DG051900
rosa_wichuraiana	Rw6G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1469
AatII	GACGTC	1 cut(s)	113
Acc36I	ACCTGC	1 cut(s)	1469
AccB1I	GGYRCC	1 cut(s)	58
AciI	CCGC	1 cut(s)	20
AclWI	GGATC	1 cut(s)	1492
AcsI	RAATTY	3 cut(s)	242, 638, 757
AcuI	CTGAAG	2 cut(s)	703, 1052
AcyI	GRCGYC	2 cut(s)	59, 110
AfaI	GTAC	4 cut(s)	533, 1087, 1267, 1565
AfiI	CCNNNNNNNGG	2 cut(s)	173, 1180
AflIII	ACRYGT	1 cut(s)	627
AgsI	TTSAA	7 cut(s)	426, 443, 473, 496, 755, 839, 1055
AjnI	CCWGG	4 cut(s)	320, 1195, 1300, 1399
AjuI	GAANNNNNNNTTGG	4 cut(s)	465, 497, 1632, 1664
AluBI	AGCT	9 cut(s)	7, 99, 275, 353, 769, 1073, 1145, 1238, 1607
AluI	AGCT	9 cut(s)	7, 99, 275, 353, 769, 1073, 1145, 1238, 1607
Alw21I	GWGCWC	2 cut(s)	277, 700
Alw26I	GTCTC	2 cut(s)	788, 1091
AlwI	GGATC	1 cut(s)	1492
AlwNI	CAGNNNCTG	1 cut(s)	899
Ama87I	CYCGRG	1 cut(s)	1239
AoxI	GGCC	3 cut(s)	501, 1035, 1193
ApeKI	GCWGC	3 cut(s)	766, 1145, 1505
ApoI	RAATTY	3 cut(s)	242, 638, 757
Asp700I	GAANNNNTTC	1 cut(s)	552
AspLEI	GCGC	1 cut(s)	61
AspS9I	GGNCC	3 cut(s)	266, 591, 1193
AsuC2I	CCSGG	1 cut(s)	270
AsuHPI	GGTGA	7 cut(s)	105, 118, 527, 535, 551, 968, 1325
AvaI	CYCGRG	1 cut(s)	1239
AvaII	GGWCC	2 cut(s)	266, 591
BaeGI	GKGCMC	1 cut(s)	1378
BanI	GGYRCC	1 cut(s)	58
BanII	GRGCYC	1 cut(s)	277
Bbv12I	GWGCWC	2 cut(s)	277, 700
BbvI	GCAGC	3 cut(s)	778, 1132, 1492
BcgI	CGANNNNNNTGC	2 cut(s)	1220, 1254
BciT130I	CCWGG	4 cut(s)	322, 1197, 1302, 1401
BciVI	GTATCC	1 cut(s)	1163
BcnI	CCSGG	1 cut(s)	270
BcoDI	GTCTC	2 cut(s)	788, 1091
BfaI	CTAG	1 cut(s)	35
BfmI	CTRYAG	1 cut(s)	357
BfoI	RGCGCY	1 cut(s)	62
BfuAI	ACCTGC	1 cut(s)	1469
BfuI	GTATCC	1 cut(s)	1163
BglI	GCCNNNNNGGC	1 cut(s)	344
BisI	GCNGC	3 cut(s)	767, 1146, 1506
BlsI	GCNGC	3 cut(s)	768, 1147, 1507
BmcAI	AGTACT	1 cut(s)	1087
Bme1390I	CCNGG	5 cut(s)	270, 322, 1197, 1302, 1401
Bme18I	GGWCC	2 cut(s)	266, 591
BmeT110I	CYCGRG	1 cut(s)	1239
BmgT120I	GGNCC	3 cut(s)	266, 591, 1193
BmiI	GGNNCC	2 cut(s)	60, 268
BmrFI	CCNGG	5 cut(s)	270, 322, 1197, 1302, 1401
BmsI	GCATC	2 cut(s)	880, 919
BpmI	CTGGAG	3 cut(s)	369, 562, 1500
Bpu10I	CCTNAGC	1 cut(s)	933
BpuEI	CTTGAG	2 cut(s)	121, 1102
BpuMI	CCSGG	1 cut(s)	270
Bsa29I	ATCGAT	2 cut(s)	68, 1573
BsaBI	GATNNNNATC	1 cut(s)	1489
BsaHI	GRCGYC	2 cut(s)	59, 110
BsaJI	CCNNGG	5 cut(s)	806, 1003, 1196, 1301, 1400
BsaWI	WCCGGW	2 cut(s)	115, 263
Bsc4I	CCNNNNNNNGG	2 cut(s)	173, 1180
Bse1I	ACTGG	2 cut(s)	545, 730
Bse3DI	GCAATG	1 cut(s)	1292
Bse8I	GATNNNNATC	1 cut(s)	1489
BseBI	CCWGG	4 cut(s)	322, 1197, 1302, 1401
BseCI	ATCGAT	2 cut(s)	68, 1573
BseDI	CCNNGG	5 cut(s)	806, 1003, 1196, 1301, 1400
BseJI	GATNNNNATC	1 cut(s)	1489
BseLI	CCNNNNNNNGG	2 cut(s)	173, 1180
BseMI	GCAATG	1 cut(s)	1292
BseMII	CTCAG	4 cut(s)	182, 683, 947, 1056
BseNI	ACTGG	2 cut(s)	545, 730
BseRI	GAGGAG	2 cut(s)	398, 935
BseSI	GKGCMC	1 cut(s)	1378
BseXI	GCAGC	3 cut(s)	778, 1132, 1492
BsgI	GTGCAG	2 cut(s)	447, 1044
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	3 cut(s)	503, 1037, 1195
BshNI	GGYRCC	1 cut(s)	58
BshVI	ATCGAT	2 cut(s)	68, 1573
BsiEI	CGRYCG	1 cut(s)	301
BsiHKAI	GWGCWC	2 cut(s)	277, 700
BsiHKCI	CYCGRG	1 cut(s)	1239
BsiSI	CCGG	3 cut(s)	116, 264, 270
BslFI	GGGAC	3 cut(s)	39, 252, 833
BslI	CCNNNNNNNGG	2 cut(s)	173, 1180
BsmAI	GTCTC	2 cut(s)	788, 1091
BsmFI	GGGAC	3 cut(s)	39, 252, 833
BsmI	GAATGC	4 cut(s)	340, 1253, 1352, 1387
BsnI	GGCC	3 cut(s)	503, 1037, 1195
BsoBI	CYCGRG	1 cut(s)	1239
Bsp1286I	GDGCHC	3 cut(s)	277, 700, 1378
Bsp1407I	TGTACA	2 cut(s)	1265, 1563
Bsp143I	GATC	5 cut(s)	14, 298, 864, 1450, 1484
BspACI	CCGC	1 cut(s)	20
BspANI	GGCC	3 cut(s)	503, 1037, 1195
BspCNI	CTCAG	4 cut(s)	181, 682, 946, 1057
BspDI	ATCGAT	2 cut(s)	68, 1573
BspHI	TCATGA	1 cut(s)	1453
BspLI	GGNNCC	2 cut(s)	60, 268
BspMAI	CTGCAG	1 cut(s)	361
BspMI	ACCTGC	1 cut(s)	1469
BspPI	GGATC	1 cut(s)	1492
BspT107I	GGYRCC	1 cut(s)	58
BsrDI	GCAATG	1 cut(s)	1292
BsrGI	TGTACA	2 cut(s)	1265, 1563
BsrI	ACTGG	2 cut(s)	545, 730
BssECI	CCNNGG	5 cut(s)	806, 1003, 1196, 1301, 1400
BssMI	GATC	5 cut(s)	14, 298, 864, 1450, 1484
BssNI	GRCGYC	2 cut(s)	59, 110
BssT1I	CCWWGG	1 cut(s)	806
Bst2UI	CCWGG	4 cut(s)	322, 1197, 1302, 1401
Bst4CI	ACNGT	5 cut(s)	143, 572, 599, 1581, 1620
BstACI	GRCGYC	2 cut(s)	59, 110
BstAPI	GCANNNNNTGC	2 cut(s)	1259, 1505
BstAUI	TGTACA	2 cut(s)	1265, 1563
BstC8I	GCNNGC	5 cut(s)	1071, 1133, 1162, 1251, 1674
BstDEI	CTNAG	4 cut(s)	168, 669, 933, 1065
BstH2I	RGCGCY	1 cut(s)	62
BstHHI	GCGC	1 cut(s)	61
BstKTI	GATC	5 cut(s)	17, 301, 867, 1453, 1487
BstMAI	GTCTC	2 cut(s)	788, 1091
BstMBI	GATC	5 cut(s)	14, 298, 864, 1450, 1484
BstMCI	CGRYCG	1 cut(s)	301
BstMWI	GCNNNNNNNGC	6 cut(s)	344, 1022, 1259, 1382, 1505, 1613
BstNI	CCWGG	4 cut(s)	322, 1197, 1302, 1401
BstNSI	RCATGY	4 cut(s)	187, 631, 1253, 1676
BstSCI	CCNGG	5 cut(s)	268, 320, 1195, 1300, 1399
BstSFI	CTRYAG	1 cut(s)	357
BstSLI	GKGCMC	1 cut(s)	1378
BstV1I	GCAGC	3 cut(s)	778, 1132, 1492
BstXI	CCANNNNNNTGG	1 cut(s)	347
Bsu15I	ATCGAT	2 cut(s)	68, 1573
BsuI	GTATCC	1 cut(s)	1163
BsuRI	GGCC	3 cut(s)	503, 1037, 1195
BsuTUI	ATCGAT	2 cut(s)	68, 1573
BtsIMutI	CAGTG	4 cut(s)	148, 677, 723, 1378
BveI	ACCTGC	1 cut(s)	1469
Cac8I	GCNNGC	5 cut(s)	1071, 1133, 1162, 1251, 1674
CaiI	CAGNNNCTG	1 cut(s)	899
CciI	TCATGA	1 cut(s)	1453
CfoI	GCGC	1 cut(s)	61
Cfr13I	GGNCC	3 cut(s)	266, 591, 1193
ClaI	ATCGAT	2 cut(s)	68, 1573
Csp6I	GTAC	4 cut(s)	532, 1086, 1266, 1564
CspCI	CAANNNNNGTGG	2 cut(s)	1105, 1140
CviQI	GTAC	4 cut(s)	532, 1086, 1266, 1564
DdeI	CTNAG	4 cut(s)	168, 669, 933, 1065
DinI	GGCGCC	1 cut(s)	60
DpnI	GATC	5 cut(s)	16, 300, 866, 1452, 1486
DpnII	GATC	5 cut(s)	14, 298, 864, 1450, 1484
DraI	TTTAAA	2 cut(s)	781, 1309
Ecl136II	GAGCTC	1 cut(s)	275
Eco130I	CCWWGG	1 cut(s)	806
Eco24I	GRGCYC	1 cut(s)	277
Eco47I	GGWCC	2 cut(s)	266, 591
Eco53kI	GAGCTC	1 cut(s)	275
Eco57I	CTGAAG	2 cut(s)	703, 1052
Eco88I	CYCGRG	1 cut(s)	1239
EcoICRI	GAGCTC	1 cut(s)	275
EcoRII	CCWGG	4 cut(s)	320, 1195, 1300, 1399
EcoT14I	CCWWGG	1 cut(s)	806
EcoT22I	ATGCAT	1 cut(s)	1255
EcoT38I	GRGCYC	1 cut(s)	277
EgeI	GGCGCC	1 cut(s)	60
EheI	GGCGCC	1 cut(s)	60
ErhI	CCWWGG	1 cut(s)	806
FalI	AAGNNNNNCTT	6 cut(s)	83, 115, 1158, 1190, 1459, 1491
FaqI	GGGAC	3 cut(s)	39, 252, 833
Fnu4HI	GCNGC	3 cut(s)	767, 1146, 1506
FriOI	GRGCYC	1 cut(s)	277
Fsp4HI	GCNGC	3 cut(s)	767, 1146, 1506
FspBI	CTAG	1 cut(s)	35
GlaI	GCGC	1 cut(s)	60
GluI	GCNGC	3 cut(s)	767, 1146, 1506
GsuI	CTGGAG	3 cut(s)	369, 562, 1500
HaeII	RGCGCY	1 cut(s)	62
HaeIII	GGCC	3 cut(s)	503, 1037, 1195
HapII	CCGG	3 cut(s)	116, 264, 270
HhaI	GCGC	1 cut(s)	61
Hin1I	GRCGYC	2 cut(s)	59, 110
Hin6I	GCGC	1 cut(s)	59
HinP1I	GCGC	1 cut(s)	59
HinfI	GANTC	6 cut(s)	27, 214, 548, 796, 896, 1592
HpaII	CCGG	3 cut(s)	116, 264, 270
HphI	GGTGA	7 cut(s)	105, 118, 527, 535, 551, 968, 1325
Hpy166II	GTNNAC	3 cut(s)	532, 1213, 1564
Hpy188I	TCNGA	8 cut(s)	12, 219, 241, 845, 901, 915, 1032, 1597
Hpy188III	TCNNGA	6 cut(s)	701, 752, 1241, 1454, 1479, 1631
Hpy8I	GTNNAC	3 cut(s)	532, 1213, 1564
Hpy99I	CGWCG	1 cut(s)	286
HpyAV	CCTTC	7 cut(s)	214, 319, 337, 493, 728, 937, 1027
HpyCH4III	ACNGT	5 cut(s)	143, 572, 599, 1581, 1620
HpyCH4IV	ACGT	2 cut(s)	110, 284
HpyF10VI	GCNNNNNNNGC	6 cut(s)	344, 1022, 1259, 1382, 1505, 1613
HpyF3I	CTNAG	4 cut(s)	168, 669, 933, 1065
HpySE526I	ACGT	2 cut(s)	110, 284
Hsp92I	GRCGYC	2 cut(s)	59, 110
HspAI	GCGC	1 cut(s)	59
KasI	GGCGCC	1 cut(s)	58
Kzo9I	GATC	5 cut(s)	14, 298, 864, 1450, 1484
LmnI	GCTCC	7 cut(s)	4, 180, 272, 350, 703, 922, 1390
Lsp1109I	GCAGC	3 cut(s)	778, 1132, 1492
LweI	GCATC	2 cut(s)	880, 919
MaeI	CTAG	1 cut(s)	35
MaeII	ACGT	2 cut(s)	110, 284
MaeIII	GTNAC	6 cut(s)	106, 111, 623, 728, 826, 961
MalI	GATC	5 cut(s)	16, 300, 866, 1452, 1486
MboI	GATC	5 cut(s)	14, 298, 864, 1450, 1484
MboII	GAAGA	8 cut(s)	103, 425, 428, 508, 699, 874, 1067, 1346
MhlI	GDGCHC	3 cut(s)	277, 700, 1378
MluCI	AATT	5 cut(s)	242, 638, 757, 1524, 1599
Mly113I	GGCGCC	1 cut(s)	59
MlyI	GAGTC	3 cut(s)	21, 790, 890
Mph1103I	ATGCAT	1 cut(s)	1255
MroXI	GAANNNNTTC	1 cut(s)	552
MseI	TTAA	6 cut(s)	392, 618, 761, 780, 1308, 1523
MslI	CAYNNNNRTG	4 cut(s)	564, 632, 1498, 1662
MspA1I	CMGCKG	3 cut(s)	20, 769, 1073
MspI	CCGG	3 cut(s)	116, 264, 270
MspR9I	CCNGG	5 cut(s)	270, 322, 1197, 1302, 1401
Mva1269I	GAATGC	4 cut(s)	340, 1253, 1352, 1387
MvaI	CCWGG	4 cut(s)	322, 1197, 1302, 1401
MwoI	GCNNNNNNNGC	6 cut(s)	344, 1022, 1259, 1382, 1505, 1613
NarI	GGCGCC	1 cut(s)	59
NciI	CCSGG	1 cut(s)	270
NdeII	GATC	5 cut(s)	14, 298, 864, 1450, 1484
NlaIV	GGNNCC	2 cut(s)	60, 268
NmuCI	GTSAC	4 cut(s)	106, 111, 623, 826
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	4 cut(s)	187, 631, 1253, 1676
PaeI	GCATGC	2 cut(s)	1253, 1676
PaeR7I	CTCGAG	1 cut(s)	1239
PagI	TCATGA	1 cut(s)	1453
PaqCI	CACCTGC	1 cut(s)	1469
PciI	ACATGT	1 cut(s)	627
PcsI	WCGNNNNNNNCGW	1 cut(s)	1000
PctI	GAATGC	4 cut(s)	340, 1253, 1352, 1387
PdmI	GAANNNNTTC	1 cut(s)	552
PfeI	GAWTC	3 cut(s)	214, 548, 1592
PfoI	TCCNGGA	1 cut(s)	268
PkrI	GCNGC	3 cut(s)	768, 1147, 1507
Ple19I	CGATCG	1 cut(s)	301
PleI	GAGTC	3 cut(s)	21, 790, 890
PluTI	GGCGCC	1 cut(s)	62
PpsI	GAGTC	3 cut(s)	21, 790, 890
PscI	ACATGT	1 cut(s)	627
Psp124BI	GAGCTC	1 cut(s)	277
Psp6I	CCWGG	4 cut(s)	320, 1195, 1300, 1399
PspGI	CCWGG	4 cut(s)	320, 1195, 1300, 1399
PspN4I	GGNNCC	2 cut(s)	60, 268
PspPI	GGNCC	3 cut(s)	266, 591, 1193
PstI	CTGCAG	1 cut(s)	361
PstNI	CAGNNNCTG	1 cut(s)	899
PvuI	CGATCG	1 cut(s)	301
PvuII	CAGCTG	2 cut(s)	769, 1073
RsaI	GTAC	4 cut(s)	533, 1087, 1267, 1565
RsaNI	GTAC	4 cut(s)	532, 1086, 1266, 1564
RseI	CAYNNNNRTG	4 cut(s)	564, 632, 1498, 1662
SacI	GAGCTC	1 cut(s)	277
SaqAI	TTAA	6 cut(s)	392, 618, 761, 780, 1308, 1523
SatI	GCNGC	3 cut(s)	767, 1146, 1506
Sau3AI	GATC	5 cut(s)	14, 298, 864, 1450, 1484
Sau96I	GGNCC	3 cut(s)	266, 591, 1193
ScaI	AGTACT	1 cut(s)	1087
SchI	GAGTC	3 cut(s)	21, 790, 890
ScrFI	CCNGG	5 cut(s)	270, 322, 1197, 1302, 1401
SduI	GDGCHC	3 cut(s)	277, 700, 1378
SfaNI	GCATC	2 cut(s)	880, 919
SfcI	CTRYAG	1 cut(s)	357
SfoI	GGCGCC	1 cut(s)	60
Sfr274I	CTCGAG	1 cut(s)	1239
SinI	GGWCC	2 cut(s)	266, 591
SlaI	CTCGAG	1 cut(s)	1239
SmiMI	CAYNNNNRTG	4 cut(s)	564, 632, 1498, 1662
SmlI	CTYRAG	3 cut(s)	100, 1081, 1239
SmoI	CTYRAG	3 cut(s)	100, 1081, 1239
SphI	GCATGC	2 cut(s)	1253, 1676
Sse9I	AATT	5 cut(s)	242, 638, 757, 1524, 1599
SsiI	CCGC	1 cut(s)	20
SspDI	GGCGCC	1 cut(s)	58
SspMI	CTAG	1 cut(s)	35
SstI	GAGCTC	1 cut(s)	277
StyD4I	CCNGG	5 cut(s)	268, 320, 1195, 1300, 1399
StyI	CCWWGG	1 cut(s)	806
TaaI	ACNGT	5 cut(s)	143, 572, 599, 1581, 1620
TaiI	ACGT	2 cut(s)	113, 287
TaqI	TCGA	7 cut(s)	68, 297, 799, 867, 994, 1240, 1573
TasI	AATT	5 cut(s)	242, 638, 757, 1524, 1599
TatI	WGTACW	3 cut(s)	1085, 1265, 1563
TfiI	GAWTC	3 cut(s)	214, 548, 1592
Tru1I	TTAA	6 cut(s)	392, 618, 761, 780, 1308, 1523
Tru9I	TTAA	6 cut(s)	392, 618, 761, 780, 1308, 1523
TscAI	CASTG	4 cut(s)	148, 677, 730, 1378
TseFI	GTSAC	4 cut(s)	106, 111, 623, 826
TseI	GCWGC	3 cut(s)	766, 1145, 1505
Tsp45I	GTSAC	4 cut(s)	106, 111, 623, 826
TspDTI	ATGAA	4 cut(s)	597, 621, 1248, 1359
TspRI	CASTG	4 cut(s)	148, 677, 730, 1378
VpaK11BI	GGWCC	2 cut(s)	266, 591
XapI	RAATTY	3 cut(s)	242, 638, 757
XceI	RCATGY	4 cut(s)	187, 631, 1253, 1676
XhoI	CTCGAG	1 cut(s)	1239
XmnI	GAANNNNTTC	1 cut(s)	552
XspI	CTAG	1 cut(s)	35
ZraI	GACGTC	1 cut(s)	111
ZrmI	AGTACT	1 cut(s)	1087
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.