Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0015202

Physical Location & Seq

Genomic Coordinates Forward (+)

33488305 .. 33491924

Gene Structure 3620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1205600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGCAGCAGCGCCACCACCAACCCCCAAACCAACCCCATTTCTCCGCCGCCTCGGGTCCCGCCACTCCGTTCGGCTCCCTCGCCATCCTCCCTTCTTCCAGCTCAGAGGCCAAGCGCGGAAAGAGGCGCGGCAGTTACAGCTGCGGCCGATGCGGCCAGCCGAAGAAGGGCCACAAGTGCCACCTCCCCGCCAACTCCACCGCCGATGAATCGTTCGTCGATGAGGCGTCCTCTCCTTCTCTCTCCGTCACCCGCCCCCCTCCGCCGCCACGTCTGCCCTACTCCCACCTCCGCCGAGCGCTATCGTTCGATGACGATGTGGATAGTTCTGGATACGGCGGAGGAGGCGGAGACTTTGACTCTCCGGATCCGGACCCTGACGAGTTCGGAGACTCCGGGGACGATATAGATTTGGCTACGGGTTTGGGCGGTCTGCCGGCGAGCTGTCTTTGGGATATTTTGAAGAGGTTGCCGCCGCCGGGGCTGTTGTCGGCGGCGATGGTGTGCAAGGGGTGGAGGGAGACGACGAGGAGGCTGTGGAAGGCGGCGGAGATGCTTAGGATTAGGGTTCCGGCTAGGGCTCAGGTCGGGTTTGTTGGATCGGTGCTGCAGAAATGCCCGGGCCTCGTGAACCTCTCTCTTAGGATGGAAAGTGATGTGGATGCAACATTGCTGGCGTGGATTACATTTTCATGCCCAAATCTTGAGTTCTTGGAGATCAATACTACCGGAAGCGCTATCAATCGGATCACCGGTGATGAACTGGGTCGCTTCGTTGCTGATAGACGATTACTGAAAAGCCTTCAGATGGAAGGTTGTTCTAACTTGGGTGGATTTGCTCTCTGTTCATCAAGTCTTTCTACAATTTGGCTTTCGGGTCTTCACTCCCTCTCTAAGATGGTTTTCAATTGCCCCAATCTAAAAGAGATTTCTGTAGACTTTTCTCGCCAAGAAAATGATAGTACTGATCTTGTTACCATGGCTGACGTGCTGGGAAGGAATTGTCCAAGGTTACAAAACATACACATTGCATCAATCCGGCTTTCCAACGCTGTTGTGCTTGCCCTTACAGCCGCAAAGCTAAGGGGGTTGAGAATGCTTTCTCTTGTCCTTGGGTCTGAAATCACCGATGCCTCTGTTGCTGCCATTGCTTCGAGTTACCAGAACTTAGAATTGCTAGATCTGAGTGGATCTAGCATCAGCGATAGTGGCATTGGAATGATTTGCAACGTGTTCCCTGATACTCTATCGAGACTACTCGTTGCTCTTTGCCCTAATATCAGTTCAAGTTTCATTCAATTTGCTACTGCACAACTGCCTCTGCTTGAACTCCTGGACTGTGGCATGACCATATGTGATCCTAATTCTCCCCTTTCACCCTCTGATGAAACCAATGCCCGTGAACTCCCCGAAGCATCCAATGCCAAAGTACACCATAGTTACCAGAAGCTGATTATCAAACATGCCCGGTTGAAAAAACTGAGCTTGTGGGGTTGTTCTGGTTTAGATGCTCTATATTTAAACTGCCGAGAACTCAATGACCTGAACTTGAATTATTGCAAAAATTTGTACCCAGAGAGATTGGTGCTTCAGTGTCCCAAGTTAGAAAATGTGCATGCATCAGGTTGTCAAGAACTGTTGATTGGGGCCATTCAGAGCCAGGTTGATAACAATGCTGGTGCGGATAACCTATTACCATGCAAGCGCCTAGCTGATGGCTCGAAGAGGGTTGGGGTGCCTCATTTTCTCAGCGCTGCACAGCCATCAGACGATGATAAGAAGCGAAGAAAGATCGAGAGGCGGAAGTGCAGTGTGCTTGTATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000278 GO:0000280 GO:0001673 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0006996 GO:0007049 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010498 GO:0016043 GO:0019005 GO:0019538 GO:0019941 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030163 GO:0031146 GO:0031461 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0043073 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048285 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051603 GO:0051704 GO:0055047 GO:0061458 GO:0071704 GO:0071840 GO:0140014 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

609

Amino Acids

65.78

Weight (kDa)

7.46

Isoelectric Point (pI)

50.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	144 - 181	1.6e-06	F-box-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54650
fragaria_vesca	FvH4_2g22510
malus_domestica	MD05G1205600.v1.1 MD10G1192800.v1.1
prunus_persica	Prupe.8G232000_v2.0.a1
pyrus_communis	pycom05g19170 pycom10g16630 pycom10g16640
rosa_chinensis	RchiOBHm_Chr6g0289551
rosa_laevigata	RLG00000012294
rosa_roxburghii	Rroxscaffold_7G00177870
rosa_rugosa	Rorug06G0204300
rosa_samantha	Rh6AG316000 Rh6CG329000 Rh6DG314700
rosa_wichuraiana	Rw6G027250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1735
AccI	GTMKAC	1 cut(s)	936
AccII	CGCG	2 cut(s)	117, 129
AccIII	TCCGGA	2 cut(s)	364, 370
AclWI	GGATC	6 cut(s)	362, 375, 607, 755, 1198, 1352
AcoI	YGGCCR	2 cut(s)	145, 154
AcsI	RAATTY	1 cut(s)	1564
AcuI	CTGAAG	2 cut(s)	788, 1574
AcyI	GRCGYC	1 cut(s)	227
AfaI	GTAC	3 cut(s)	964, 1431, 1571
AfeI	AGCGCT	3 cut(s)	300, 736, 1753
AfiI	CCNNNNNNNGG	3 cut(s)	167, 479, 808
AflIII	ACRYGT	1 cut(s)	1230
AgeI	ACCGGT	1 cut(s)	752
AgsI	TTSAA	7 cut(s)	463, 907, 1287, 1298, 1328, 1474, 1552
AjiI	CACGTC	2 cut(s)	272, 988
AjnI	CCWGG	2 cut(s)	1332, 1659
AjuI	GAANNNNNNNTTGG	2 cut(s)	1626, 1658
AluBI	AGCT	7 cut(s)	102, 141, 444, 1081, 1450, 1485, 1712
AluI	AGCT	7 cut(s)	102, 141, 444, 1081, 1450, 1485, 1712
Alw26I	GTCTC	4 cut(s)	345, 384, 515, 1246
AlwI	GGATC	6 cut(s)	362, 375, 607, 755, 1198, 1352
AlwNI	CAGNNNCTG	1 cut(s)	1450
Ama87I	CYCGRG	2 cut(s)	52, 619
Aor13HI	TCCGGA	2 cut(s)	364, 370
Aor51HI	AGCGCT	3 cut(s)	300, 736, 1753
AoxI	GGCC	6 cut(s)	108, 145, 154, 169, 622, 1647
ApeKI	GCWGC	6 cut(s)	4, 7, 141, 607, 1142, 1754
ApoI	RAATTY	1 cut(s)	1564
AsiGI	ACCGGT	1 cut(s)	752
Asp700I	GAANNNNTTC	1 cut(s)	1099
AspLEI	GCGC	7 cut(s)	12, 117, 129, 301, 737, 1707, 1754
AspS9I	GGNCC	5 cut(s)	56, 169, 373, 622, 1647
AsuC2I	CCSGG	5 cut(s)	397, 480, 620, 621, 1468
AsuHPI	GGTGA	5 cut(s)	241, 742, 767, 1117, 1368
AvaI	CYCGRG	2 cut(s)	52, 619
AvaII	GGWCC	2 cut(s)	56, 373
BamHI	GGATCC	1 cut(s)	367
BanI	GGYRCC	1 cut(s)	1735
BanII	GRGCYC	1 cut(s)	583
BauI	CACGAG	1 cut(s)	626
BbsI	GAAGAC	1 cut(s)	872
BbvI	GCAGC	6 cut(s)	16, 19, 128, 594, 1129, 1741
BccI	CCATC	7 cut(s)	92, 493, 640, 802, 892, 1709, 1771
BceAI	ACGGC	1 cut(s)	352
BciT130I	CCWGG	2 cut(s)	1334, 1661
BciVI	GTATCC	1 cut(s)	326
BcnI	CCSGG	5 cut(s)	397, 480, 620, 621, 1468
BcoDI	GTCTC	4 cut(s)	345, 384, 515, 1246
BfaI	CTAG	4 cut(s)	576, 1178, 1194, 1709
BfmI	CTRYAG	2 cut(s)	608, 933
BfoI	RGCGCY	5 cut(s)	13, 302, 738, 1708, 1755
BfuI	GTATCC	1 cut(s)	326
BglI	GCCNNNNNGGC	2 cut(s)	153, 481
BglII	AGATCT	1 cut(s)	1180
BmcAI	AGTACT	1 cut(s)	964
Bme1390I	CCNGG	7 cut(s)	397, 480, 620, 621, 1334, 1468, 1661
Bme18I	GGWCC	2 cut(s)	56, 373
BmeT110I	CYCGRG	2 cut(s)	52, 619
BmgBI	CACGTC	2 cut(s)	272, 988
BmgT120I	GGNCC	5 cut(s)	56, 169, 373, 622, 1647
BmiI	GGNNCC	8 cut(s)	57, 58, 76, 369, 375, 570, 1648, 1737
BmrFI	CCNGG	7 cut(s)	397, 480, 620, 621, 1334, 1468, 1661
BmrI	ACTGGG	1 cut(s)	773
BmsI	GCATC	9 cut(s)	140, 543, 652, 1040, 1120, 1206, 1424, 1498, 1628
BmuI	ACTGGG	1 cut(s)	773
BpiI	GAAGAC	1 cut(s)	872
BplI	GAGNNNNNCTC	2 cut(s)	215, 247
Bpu10I	CCTNAGC	3 cut(s)	557, 582, 1082
BpuEI	CTTGAG	1 cut(s)	725
BpuMI	CCSGG	5 cut(s)	397, 480, 620, 621, 1468
BsaHI	GRCGYC	1 cut(s)	227
BsaJI	CCNNGG	7 cut(s)	51, 396, 479, 619, 978, 1007, 1111
BsaWI	WCCGGW	4 cut(s)	364, 370, 728, 752
Bsc4I	CCNNNNNNNGG	3 cut(s)	167, 479, 808
Bse118I	RCCGGY	2 cut(s)	436, 752
Bse1I	ACTGG	1 cut(s)	768
Bse3DI	GCAATG	3 cut(s)	668, 1026, 1146
BseAI	TCCGGA	2 cut(s)	364, 370
BseBI	CCWGG	2 cut(s)	1334, 1661
BseDI	CCNNGG	7 cut(s)	51, 396, 479, 619, 978, 1007, 1111
BseGI	GGATG	4 cut(s)	84, 651, 667, 1415
BseLI	CCNNNNNNNGG	3 cut(s)	167, 479, 808
BseMI	GCAATG	3 cut(s)	668, 1026, 1146
BseMII	CTCAG	5 cut(s)	117, 596, 1175, 1472, 1762
BseNI	ACTGG	1 cut(s)	768
BseRI	GAGGAG	2 cut(s)	357, 544
BseX3I	CGGCCG	1 cut(s)	145
BseXI	GCAGC	6 cut(s)	16, 19, 128, 594, 1129, 1741
BseYI	CCCAGC	1 cut(s)	991
BsgI	GTGCAG	2 cut(s)	1293, 1740
Bsh1236I	CGCG	2 cut(s)	117, 129
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	6 cut(s)	110, 147, 156, 171, 624, 1649
BshNI	GGYRCC	1 cut(s)	1735
BshTI	ACCGGT	1 cut(s)	752
BsiEI	CGRYCG	1 cut(s)	148
BsiHKCI	CYCGRG	2 cut(s)	52, 619
BslFI	GGGAC	3 cut(s)	42, 413, 1581
BslI	CCNNNNNNNGG	3 cut(s)	167, 479, 808
BsmAI	GTCTC	4 cut(s)	345, 384, 515, 1246
BsmBI	CGTCTC	1 cut(s)	515
BsmFI	GGGAC	3 cut(s)	42, 413, 1581
BsmI	GAATGC	1 cut(s)	1101
BsnI	GGCC	6 cut(s)	110, 147, 156, 171, 624, 1649
BsoBI	CYCGRG	2 cut(s)	52, 619
Bsp1286I	GDGCHC	1 cut(s)	583
Bsp13I	TCCGGA	2 cut(s)	364, 370
Bsp143I	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
Bsp19I	CCATGG	1 cut(s)	978
BspANI	GGCC	6 cut(s)	110, 147, 156, 171, 624, 1649
BspCNI	CTCAG	5 cut(s)	116, 595, 1176, 1473, 1761
BspEI	TCCGGA	2 cut(s)	364, 370
BspFNI	CGCG	2 cut(s)	117, 129
BspLI	GGNNCC	8 cut(s)	57, 58, 76, 369, 375, 570, 1648, 1737
BspMAI	CTGCAG	1 cut(s)	612
BspPI	GGATC	6 cut(s)	362, 375, 607, 755, 1198, 1352
BspT107I	GGYRCC	1 cut(s)	1735
BsrDI	GCAATG	3 cut(s)	668, 1026, 1146
BsrFI	RCCGGY	2 cut(s)	436, 752
BsrI	ACTGG	1 cut(s)	768
BssAI	RCCGGY	2 cut(s)	436, 752
BssECI	CCNNGG	7 cut(s)	51, 396, 479, 619, 978, 1007, 1111
BssMI	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
BssNI	GRCGYC	1 cut(s)	227
BssSI	CACGAG	1 cut(s)	626
BssT1I	CCWWGG	3 cut(s)	978, 1007, 1111
Bst2BI	CACGAG	1 cut(s)	626
Bst2UI	CCWGG	2 cut(s)	1334, 1661
Bst4CI	ACNGT	2 cut(s)	1340, 1638
Bst6I	CTCTTC	2 cut(s)	458, 1718
BstACI	GRCGYC	1 cut(s)	227
BstAPI	GCANNNNNTGC	1 cut(s)	1421
BstC8I	GCNNGC	7 cut(s)	158, 438, 442, 675, 1062, 1617, 1703
BstDSI	CCRYGG	1 cut(s)	978
BstF5I	GGATG	4 cut(s)	84, 651, 667, 1415
BstFNI	CGCG	2 cut(s)	117, 129
BstH2I	RGCGCY	5 cut(s)	13, 302, 738, 1708, 1755
BstHHI	GCGC	7 cut(s)	12, 117, 129, 301, 737, 1707, 1754
BstKTI	GATC	9 cut(s)	370, 602, 720, 750, 970, 1183, 1193, 1360, 1794
BstMAI	GTCTC	4 cut(s)	345, 384, 515, 1246
BstMBI	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
BstMCI	CGRYCG	1 cut(s)	148
BstNI	CCWGG	2 cut(s)	1334, 1661
BstNSI	RCATGY	2 cut(s)	1466, 1619
BstSCI	CCNGG	7 cut(s)	395, 478, 618, 619, 1332, 1466, 1659
BstSFI	CTRYAG	2 cut(s)	608, 933
BstUI	CGCG	2 cut(s)	117, 129
BstV1I	GCAGC	6 cut(s)	16, 19, 128, 594, 1129, 1741
BstV2I	GAAGAC	1 cut(s)	872
BstX2I	RGATCY	3 cut(s)	367, 1180, 1190
BstYI	RGATCY	3 cut(s)	367, 1180, 1190
BstZI	CGGCCG	1 cut(s)	145
BsuI	GTATCC	1 cut(s)	326
BsuRI	GGCC	6 cut(s)	110, 147, 156, 171, 624, 1649
BtgI	CCRYGG	1 cut(s)	978
BtgZI	GCGATG	1 cut(s)	512
BtrI	CACGTC	2 cut(s)	272, 988
BtsCI	GGATG	4 cut(s)	84, 651, 667, 1415
BtsI	GCAGTG	1 cut(s)	1816
BtsIMutI	CAGTG	2 cut(s)	1598, 1816
Cac8I	GCNNGC	7 cut(s)	158, 438, 442, 675, 1062, 1617, 1703
CaiI	CAGNNNCTG	1 cut(s)	1450
CfoI	GCGC	7 cut(s)	12, 117, 129, 301, 737, 1707, 1754
Cfr10I	RCCGGY	2 cut(s)	436, 752
Cfr13I	GGNCC	5 cut(s)	56, 169, 373, 622, 1647
Cfr9I	CCCGGG	1 cut(s)	619
CseI	GACGC	1 cut(s)	216
Csp6I	GTAC	3 cut(s)	963, 1430, 1570
CspAI	ACCGGT	1 cut(s)	752
CviAII	CATG	6 cut(s)	693, 979, 1345, 1463, 1616, 1698
CviQI	GTAC	3 cut(s)	963, 1430, 1570
DpnI	GATC	9 cut(s)	369, 601, 719, 749, 969, 1182, 1192, 1359, 1793
DpnII	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
DraI	TTTAAA	1 cut(s)	1521
EaeI	YGGCCR	2 cut(s)	145, 154
EagI	CGGCCG	1 cut(s)	145
Eam1104I	CTCTTC	2 cut(s)	458, 1718
EarI	CTCTTC	2 cut(s)	458, 1718
EciI	GGCGGA	7 cut(s)	34, 252, 281, 354, 363, 563, 1816
EclXI	CGGCCG	1 cut(s)	145
Eco130I	CCWWGG	3 cut(s)	978, 1007, 1111
Eco24I	GRGCYC	1 cut(s)	583
Eco47I	GGWCC	2 cut(s)	56, 373
Eco47III	AGCGCT	3 cut(s)	300, 736, 1753
Eco52I	CGGCCG	1 cut(s)	145
Eco57I	CTGAAG	2 cut(s)	788, 1574
Eco88I	CYCGRG	2 cut(s)	52, 619
EcoO109I	RGGNCCY	1 cut(s)	56
EcoRII	CCWGG	2 cut(s)	1332, 1659
EcoT14I	CCWWGG	3 cut(s)	978, 1007, 1111
EcoT22I	ATGCAT	1 cut(s)	1621
EcoT38I	GRGCYC	1 cut(s)	583
ErhI	CCWWGG	3 cut(s)	978, 1007, 1111
Esp3I	CGTCTC	1 cut(s)	515
FaeI	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
FaqI	GGGAC	3 cut(s)	42, 413, 1581
FatI	CATG	6 cut(s)	692, 978, 1344, 1462, 1615, 1697
FauI	CCCGC	3 cut(s)	67, 196, 260
FauNDI	CATATG	1 cut(s)	1352
FblI	GTMKAC	1 cut(s)	936
FokI	GGATG	4 cut(s)	71, 658, 674, 1402
FriOI	GRGCYC	1 cut(s)	583
FspBI	CTAG	4 cut(s)	576, 1178, 1194, 1709
GlaI	GCGC	7 cut(s)	11, 116, 128, 300, 736, 1706, 1753
GsaI	CCCAGC	1 cut(s)	995
HaeII	RGCGCY	5 cut(s)	13, 302, 738, 1708, 1755
HaeIII	GGCC	6 cut(s)	110, 147, 156, 171, 624, 1649
HgaI	GACGC	1 cut(s)	216
HhaI	GCGC	7 cut(s)	12, 117, 129, 301, 737, 1707, 1754
Hin1I	GRCGYC	1 cut(s)	227
Hin1II	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
Hin6I	GCGC	7 cut(s)	10, 115, 127, 299, 735, 1705, 1752
HinP1I	GCGC	7 cut(s)	10, 115, 127, 299, 735, 1705, 1752
HinfI	GANTC	3 cut(s)	209, 359, 392
HphI	GGTGA	5 cut(s)	241, 742, 767, 1117, 1368
Hpy166II	GTNNAC	4 cut(s)	631, 937, 1403, 1432
Hpy188I	TCNGA	9 cut(s)	106, 389, 747, 807, 1120, 1185, 1384, 1656, 1768
Hpy188III	TCNNGA	8 cut(s)	330, 365, 371, 628, 704, 1251, 1631, 1795
Hpy8I	GTNNAC	4 cut(s)	631, 937, 1403, 1432
Hpy99I	CGWCG	2 cut(s)	221, 529
HpyAV	CCTTC	7 cut(s)	102, 160, 246, 535, 806, 812, 990
HpyCH4III	ACNGT	2 cut(s)	1340, 1638
HpyCH4IV	ACGT	3 cut(s)	271, 987, 1230
HpySE526I	ACGT	3 cut(s)	271, 987, 1230
Hsp92I	GRCGYC	1 cut(s)	227
Hsp92II	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
HspAI	GCGC	7 cut(s)	10, 115, 127, 299, 735, 1705, 1752
KflI	GGGWCCC	1 cut(s)	56
Kpn2I	TCCGGA	2 cut(s)	364, 370
KroI	GCCGGC	1 cut(s)	436
KroNI	GCCGGC	1 cut(s)	438
Kzo9I	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
LmnI	GCTCC	1 cut(s)	80
Lsp1109I	GCAGC	6 cut(s)	16, 19, 128, 594, 1129, 1741
LweI	GCATC	9 cut(s)	140, 543, 652, 1040, 1120, 1206, 1424, 1498, 1628
MaeI	CTAG	4 cut(s)	576, 1178, 1194, 1709
MaeII	ACGT	3 cut(s)	271, 987, 1230
MaeIII	GTNAC	6 cut(s)	134, 247, 973, 1011, 1157, 1439
MalI	GATC	9 cut(s)	369, 601, 719, 749, 969, 1182, 1192, 1359, 1793
MboI	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
MboII	GAAGA	6 cut(s)	87, 175, 475, 872, 1735, 1797
MfeI	CAATTG	1 cut(s)	907
MflI	RGATCY	3 cut(s)	367, 1180, 1190
MhlI	GDGCHC	1 cut(s)	583
MluCI	AATT	8 cut(s)	864, 907, 1000, 1172, 1298, 1363, 1552, 1564
MlyI	GAGTC	2 cut(s)	353, 386
MmeI	TCCRAC	2 cut(s)	577, 1071
Mph1103I	ATGCAT	1 cut(s)	1621
MroI	TCCGGA	2 cut(s)	364, 370
MroNI	GCCGGC	1 cut(s)	436
MroXI	GAANNNNTTC	1 cut(s)	1099
MseI	TTAA	1 cut(s)	1520
MslI	CAYNNNNRTG	2 cut(s)	691, 1217
MspA1I	CMGCKG	1 cut(s)	141
MspR9I	CCNGG	7 cut(s)	397, 480, 620, 621, 1334, 1468, 1661
MunI	CAATTG	1 cut(s)	907
Mva1269I	GAATGC	1 cut(s)	1101
MvaI	CCWGG	2 cut(s)	1334, 1661
MvnI	CGCG	2 cut(s)	117, 129
NaeI	GCCGGC	1 cut(s)	438
NciI	CCSGG	5 cut(s)	397, 480, 620, 621, 1468
NcoI	CCATGG	1 cut(s)	978
NdeI	CATATG	1 cut(s)	1352
NdeII	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
NgoMIV	GCCGGC	1 cut(s)	436
NlaIII	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
NlaIV	GGNNCC	8 cut(s)	57, 58, 76, 369, 375, 570, 1648, 1737
NmeAIII	GCCGAG	2 cut(s)	320, 1553
NmuCI	GTSAC	1 cut(s)	247
NsiI	ATGCAT	1 cut(s)	1621
NspI	RCATGY	2 cut(s)	1466, 1619
PaeI	GCATGC	1 cut(s)	1619
PctI	GAATGC	1 cut(s)	1101
PdiI	GCCGGC	1 cut(s)	438
PdmI	GAANNNNTTC	1 cut(s)	1099
PfeI	GAWTC	1 cut(s)	209
PfoI	TCCNGGA	1 cut(s)	1332
PinAI	ACCGGT	1 cut(s)	752
PleI	GAGTC	2 cut(s)	353, 386
PpsI	GAGTC	2 cut(s)	353, 386
PpuMI	RGGWCCY	1 cut(s)	56
Psp5II	RGGWCCY	1 cut(s)	56
Psp6I	CCWGG	2 cut(s)	1332, 1659
PspFI	CCCAGC	1 cut(s)	991
PspGI	CCWGG	2 cut(s)	1332, 1659
PspN4I	GGNNCC	8 cut(s)	57, 58, 76, 369, 375, 570, 1648, 1737
PspPI	GGNCC	5 cut(s)	56, 169, 373, 622, 1647
PspPPI	RGGWCCY	1 cut(s)	56
PstI	CTGCAG	1 cut(s)	612
PstNI	CAGNNNCTG	1 cut(s)	1450
PsuI	RGATCY	3 cut(s)	367, 1180, 1190
PvuII	CAGCTG	1 cut(s)	141
RsaI	GTAC	3 cut(s)	964, 1431, 1571
RsaNI	GTAC	3 cut(s)	963, 1430, 1570
RseI	CAYNNNNRTG	2 cut(s)	691, 1217
SaqAI	TTAA	1 cut(s)	1520
Sau3AI	GATC	9 cut(s)	367, 599, 717, 747, 967, 1180, 1190, 1357, 1791
Sau96I	GGNCC	5 cut(s)	56, 169, 373, 622, 1647
ScaI	AGTACT	1 cut(s)	964
SchI	GAGTC	2 cut(s)	353, 386
ScrFI	CCNGG	7 cut(s)	397, 480, 620, 621, 1334, 1468, 1661
SduI	GDGCHC	1 cut(s)	583
SfaNI	GCATC	9 cut(s)	140, 543, 652, 1040, 1120, 1206, 1424, 1498, 1628
SfcI	CTRYAG	2 cut(s)	608, 933
SfiI	GGCCNNNNNGGCC	1 cut(s)	153
SgrAI	CRCCGGYG	1 cut(s)	752
SinI	GGWCC	2 cut(s)	56, 373
SmaI	CCCGGG	1 cut(s)	621
SmiMI	CAYNNNNRTG	2 cut(s)	691, 1217
SmlI	CTYRAG	1 cut(s)	704
SmoI	CTYRAG	1 cut(s)	704
SphI	GCATGC	1 cut(s)	1619
SrfI	GCCCGGGC	1 cut(s)	621
Sse9I	AATT	8 cut(s)	864, 907, 1000, 1172, 1298, 1363, 1552, 1564
SspMI	CTAG	4 cut(s)	576, 1178, 1194, 1709
StyD4I	CCNGG	7 cut(s)	395, 478, 618, 619, 1332, 1466, 1659
StyI	CCWWGG	3 cut(s)	978, 1007, 1111
TaaI	ACNGT	2 cut(s)	1340, 1638
TaiI	ACGT	3 cut(s)	274, 990, 1233
TaqI	TCGA	6 cut(s)	219, 309, 1154, 1250, 1721, 1794
TasI	AATT	8 cut(s)	864, 907, 1000, 1172, 1298, 1363, 1552, 1564
TatI	WGTACW	2 cut(s)	962, 1429
TfiI	GAWTC	1 cut(s)	209
Tru1I	TTAA	1 cut(s)	1520
Tru9I	TTAA	1 cut(s)	1520
TscAI	CASTG	2 cut(s)	1598, 1816
TseFI	GTSAC	1 cut(s)	247
TseI	GCWGC	6 cut(s)	4, 7, 141, 607, 1142, 1754
Tsp45I	GTSAC	1 cut(s)	247
TspDTI	ATGAA	6 cut(s)	222, 681, 774, 837, 1282, 1401
TspGWI	ACGGA	2 cut(s)	57, 235
TspMI	CCCGGG	1 cut(s)	619
TspRI	CASTG	2 cut(s)	1598, 1816
VpaK11BI	GGWCC	2 cut(s)	56, 373
XapI	RAATTY	1 cut(s)	1564
XceI	RCATGY	2 cut(s)	1466, 1619
XmaI	CCCGGG	1 cut(s)	619
XmiI	GTMKAC	1 cut(s)	936
XmnI	GAANNNNTTC	1 cut(s)	1099
XspI	CTAG	4 cut(s)	576, 1178, 1194, 1709
ZrmI	AGTACT	1 cut(s)	964
Zsp2I	ATGCAT	1 cut(s)	1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.