Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0015202

Physical Location & Seq

Genomic Coordinates Forward (+)

51577678 .. 51582283

Gene Structure 4606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG329000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGTTTCAAAACCCAGGGCGCCAAAACCTTCTTTCATCTCCCGCTTCTTCCAGGGGGCCCACACGCGCCTTTGTCTCACACTTCACTCATTTTTCCCTTCTTCTATTTCTTCGCTTCTCTCAGACTCACTTTGAATCCCCCCCCCCTCCTCTAAATTTTCTCTCTAGACCTATTATGGAGCAGCGCCACCACCTCCAGCCTCACATCTCCGCCGCAGGGCCCACCACCCCGTTCGGCTCCACCGCAACCTACCCCCACGCTCCCACCGCCAGTTCCGGCCACAAGCGCCCCAGGACGCGCGGCAGTTACACCTGTGGCCGGTGTGGCCAGCCCAAGAAGGGCCACTCCTGCCACGTCCGCCCAGCCGATTCCGCCGCAGAGTCTCACCCCGACACTCCCCTCTCAGTCACCCGAACCCCGGCGCTGCCGCCTCCTCCCCCGCCACGTCAGCCCTACTCCAACCTCCGCAGAGCTCTGTCGTTCGACGACGTCGAGAGCTCCGGTTACGGAGATTCCGATGCTCCGGATCCGGATCCGGATCCGGACTTCGATGAGGTGGAGGACACGGAGGTGGATTGGGATAGGGGCTGGGGTGGTCTTCCTACGAGCTGTCTGTGGGAGATTTTGAGAAGGCTACCGCCGCCGGGGCTGTTATCGGCGGCGATGGTCTGCAAGGGATGGAGGGAGACGACAAGGAGGTTGTGGAAGGCCGCGGAGGCCCTCAGGCTTAGGGTTCCGCCGAGGGCTCAGGTTCGGTTTGTTCGATTGGTGTTGCACAAATGCCCGAACCTCGTTAGCCTCTCTCTTACAATTGAAAGTGATGTTGATGCAACAATGCTGGAGTGCATTGCATTTTCGTGCCCAAATCTTGAATCTATGGAGATCTATATTTCTGAGAAGGCAACCAATCGAATTACTGGTGATGAACTGAGTCGTTTTGTTGCTGATAGAAGATTACTGAAAAGCCTTAAGATGGAAGGTTGTTCTAATATAGGTGGCTTTGCTCTCTGTTCATCAAGTCTTTTGACACTTTGGCTTTCGGGTCTTCATTCCCTTTCTAAGATGGTTTTCAACTGCCCCAATCTGAAAGAGATTTCTATTGATTTTTCTCGCCAAGGAAATGATAATACTGATCTTACAACAATGGTTGATGGTCTGGGAAGAAATTGTCCAAGGCTGCAAAACATACACATTGCATCAGTCCGGCTTTCACATTCTGTTGTTCTTGCGCTTACAGCTGCTCAATTAAGGGATTTGCGAATGCTGTCTCTTGTTCTTGGATCTCAAATCACTGATGCATCAGTTGCTGCCATAGCTTCTACCTATCCATACTTAGAATTGCTTGATCTGAGCGGATCTAGCATCAGTGACAGTGGCATTCAAATCATTTGCAATGTGTTTCCTGAAACTCTTTCAAGGCTACTTGTTGCTCTTTGTCCCAACATCACTACAATGGGTATAGTATTTGCCACAACTCAACTGCCTCTTCTTGAACTCATGGACTGTGGCATGACGATATGTGATCCCAATTCTTCAGACCTGACCTATGAAGAAAGCAGTGACTTTCAATTATCAATGACTTCAAAAGCCAAAGCACACCTCATTTGCCAGAATCTGATTATTAAACATGGTCGATTGAAAAAACTCAGCTTGTGGGGCTGTTCTGGCTTAGATGCTCTATCTTTAAGCTGCCCAGAACTCAATGATCTAAACTTAAATTCTTGTAACAACTTGCATCCAGAGAGATTGTCACTTCAGTGCCCAAATTTAGAAAAGGTGCATGCATCAGGTTGTCAACGGATGTTGATCGGAGCCATTCACAGTCAGCTCAACAATAATATTGCTACTATGGATAGCCTATTACCATGCAAGCGTCTAGCCAGTGGCTCAAAGAGAATACTGGTTCCACATTATATAATGGAACAGGGTTTGCAGTCATATGAGGGTGATAAGAAGCGAAGAAGGGTTGAAAAGCGGCGTTGTAATGTGCTTGTCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000278 GO:0000280 GO:0001673 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0006996 GO:0007049 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010498 GO:0016043 GO:0019005 GO:0019538 GO:0019941 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030163 GO:0031146 GO:0031461 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0043073 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048285 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051603 GO:0051704 GO:0055047 GO:0061458 GO:0071704 GO:0071840 GO:0140014 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

666

Amino Acids

73.54

Weight (kDa)

8.35

Isoelectric Point (pI)

54.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	197 - 236	2.5e-07	F-box-like
F-box	PF00646	199 - 233	2.2e-06	F-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54650
fragaria_vesca	FvH4_2g22510
malus_domestica	MD05G1205600.v1.1 MD10G1192800.v1.1
prunus_persica	Prupe.8G232000_v2.0.a1
pyrus_communis	pycom05g19170 pycom10g16630 pycom10g16640
rosa_chinensis	RchiOBHm_Chr6g0289551
rosa_laevigata	RLG00000012294
rosa_roxburghii	Rroxscaffold_7G00177870
rosa_rugosa	Rorug06G0204300
rosa_samantha	Rh6AG316000 Rh6CG329000 Rh6DG314700
rosa_wichuraiana	Rw6G027250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	492
AccB1I	GGYRCC	1 cut(s)	18
AccBSI	CCGCTC	1 cut(s)	1353
AccI	GTMKAC	1 cut(s)	1995
AccII	CGCG	4 cut(s)	66, 298, 300, 713
AccIII	TCCGGA	4 cut(s)	523, 529, 535, 541
AclWI	GGATC	9 cut(s)	521, 527, 533, 534, 540, 546, 1288, 1363, 1517
AcoI	YGGCCR	3 cut(s)	277, 316, 325
AcsI	RAATTY	3 cut(s)	154, 1717, 1765
AcuI	CTGAAG	2 cut(s)	1518, 1739
AcyI	GRCGYC	2 cut(s)	19, 489
AfiI	CCNNNNNNNGG	6 cut(s)	216, 318, 338, 418, 644, 973
AflII	CTTAAG	1 cut(s)	968
AjiI	CACGTC	2 cut(s)	355, 446
AjnI	CCWGG	3 cut(s)	13, 50, 290
AleI	CACNNNNGTG	2 cut(s)	569, 1756
AluBI	AGCT	8 cut(s)	473, 498, 609, 1238, 1316, 1650, 1689, 1828
AluI	AGCT	8 cut(s)	473, 498, 609, 1238, 1316, 1650, 1689, 1828
Alw21I	GWGCWC	2 cut(s)	475, 500
Alw26I	GTCTC	4 cut(s)	79, 387, 680, 1272
AlwI	GGATC	9 cut(s)	521, 527, 533, 534, 540, 546, 1288, 1363, 1517
AlwNI	CAGNNNCTG	2 cut(s)	1307, 1615
Aor13HI	TCCGGA	4 cut(s)	523, 529, 535, 541
AoxI	GGCC	8 cut(s)	56, 218, 277, 316, 325, 340, 708, 717
ApaI	GGGCCC	2 cut(s)	60, 222
ApeKI	GCWGC	6 cut(s)	181, 424, 1177, 1238, 1307, 1689
ApoI	RAATTY	3 cut(s)	154, 1717, 1765
AspLEI	GCGC	7 cut(s)	21, 68, 186, 288, 300, 424, 1231
AspS9I	GGNCC	6 cut(s)	56, 57, 218, 219, 340, 718
AsuC2I	CCSGG	2 cut(s)	419, 645
AsuHPI	GGTGA	4 cut(s)	377, 400, 932, 1958
AxyI	CCTNAGG	1 cut(s)	722
BaeGI	GKGCMC	4 cut(s)	60, 222, 863, 1763
BalI	TGGCCA	1 cut(s)	327
BamHI	GGATCC	3 cut(s)	526, 532, 538
BanI	GGYRCC	1 cut(s)	18
BanII	GRGCYC	5 cut(s)	60, 222, 475, 500, 748
BbsI	GAAGAC	2 cut(s)	590, 1037
Bbv12I	GWGCWC	2 cut(s)	475, 500
BbvI	GCAGC	6 cut(s)	193, 411, 1164, 1225, 1294, 1676
BccI	CCATC	5 cut(s)	658, 672, 967, 1057, 1145
BciT130I	CCWGG	3 cut(s)	15, 52, 292
BcnI	CCSGG	2 cut(s)	419, 645
BcoDI	GTCTC	4 cut(s)	79, 387, 680, 1272
BfaI	CTAG	3 cut(s)	165, 1359, 1877
BfoI	RGCGCY	4 cut(s)	22, 187, 289, 425
BfrI	CTTAAG	1 cut(s)	968
BglI	GCCNNNNNGGC	3 cut(s)	324, 646, 716
BglII	AGATCT	1 cut(s)	882
Bme1390I	CCNGG	5 cut(s)	15, 52, 292, 419, 645
BmgBI	CACGTC	2 cut(s)	355, 446
BmgT120I	GGNCC	6 cut(s)	56, 57, 218, 219, 340, 718
BmrFI	CCNGG	5 cut(s)	15, 52, 292, 419, 645
BmsI	GCATC	9 cut(s)	508, 817, 1205, 1285, 1307, 1371, 1663, 1744, 1793
BpiI	GAAGAC	2 cut(s)	590, 1037
BpmI	CTGGAG	2 cut(s)	179, 860
Bpu10I	CCTNAGC	2 cut(s)	728, 747
BpuMI	CCSGG	2 cut(s)	419, 645
BsaBI	GATNNNNATC	3 cut(s)	531, 537, 1805
BsaHI	GRCGYC	2 cut(s)	19, 489
BsaWI	WCCGGW	5 cut(s)	500, 523, 529, 535, 541
Bsc4I	CCNNNNNNNGG	6 cut(s)	216, 318, 338, 418, 644, 973
Bse118I	RCCGGY	1 cut(s)	318
Bse1I	ACTGG	4 cut(s)	270, 922, 1881, 1905
Bse21I	CCTNAGG	1 cut(s)	722
Bse3DI	GCAATG	3 cut(s)	846, 1191, 1399
Bse8I	GATNNNNATC	3 cut(s)	531, 537, 1805
BseAI	TCCGGA	4 cut(s)	523, 529, 535, 541
BseBI	CCWGG	3 cut(s)	15, 52, 292
BseGI	GGATG	3 cut(s)	683, 1735, 1806
BseJI	GATNNNNATC	3 cut(s)	531, 537, 1805
BseLI	CCNNNNNNNGG	6 cut(s)	216, 318, 338, 418, 644, 973
BseMI	GCAATG	3 cut(s)	846, 1191, 1399
BseMII	CTCAG	8 cut(s)	134, 417, 736, 761, 885, 920, 1340, 1660
BseNI	ACTGG	4 cut(s)	270, 922, 1881, 1905
BseRI	GAGGAG	2 cut(s)	138, 423
BseSI	GKGCMC	4 cut(s)	60, 222, 863, 1763
BseXI	GCAGC	6 cut(s)	193, 411, 1164, 1225, 1294, 1676
BseYI	CCCAGC	2 cut(s)	361, 588
Bsh1236I	CGCG	4 cut(s)	66, 298, 300, 713
BshFI	GGCC	8 cut(s)	58, 220, 279, 318, 327, 342, 710, 719
BshNI	GGYRCC	1 cut(s)	18
BsiHKAI	GWGCWC	2 cut(s)	475, 500
BslFI	GGGAC	1 cut(s)	1422
BslI	CCNNNNNNNGG	6 cut(s)	216, 318, 338, 418, 644, 973
BsmAI	GTCTC	4 cut(s)	79, 387, 680, 1272
BsmBI	CGTCTC	1 cut(s)	680
BsmFI	GGGAC	1 cut(s)	1422
BsmI	GAATGC	2 cut(s)	1266, 1377
BsnI	GGCC	8 cut(s)	58, 220, 279, 318, 327, 342, 710, 719
Bsp120I	GGGCCC	2 cut(s)	56, 218
Bsp1286I	GDGCHC	7 cut(s)	60, 222, 475, 500, 748, 863, 1763
Bsp13I	TCCGGA	4 cut(s)	523, 529, 535, 541
BspANI	GGCC	8 cut(s)	58, 220, 279, 318, 327, 342, 710, 719
BspCNI	CTCAG	8 cut(s)	133, 416, 735, 760, 886, 921, 1341, 1659
BspEI	TCCGGA	4 cut(s)	523, 529, 535, 541
BspFNI	CGCG	4 cut(s)	66, 298, 300, 713
BspPI	GGATC	9 cut(s)	521, 527, 533, 534, 540, 546, 1288, 1363, 1517
BspT107I	GGYRCC	1 cut(s)	18
BspTI	CTTAAG	1 cut(s)	968
BsrBI	CCGCTC	1 cut(s)	1353
BsrDI	GCAATG	3 cut(s)	846, 1191, 1399
BsrFI	RCCGGY	1 cut(s)	318
BsrI	ACTGG	4 cut(s)	270, 922, 1881, 1905
BssAI	RCCGGY	1 cut(s)	318
BssNI	GRCGYC	2 cut(s)	19, 489
BssT1I	CCWWGG	2 cut(s)	1114, 1172
Bst2UI	CCWGG	3 cut(s)	15, 52, 292
Bst4CI	ACNGT	3 cut(s)	1373, 1505, 1823
Bst6I	CTCTTC	1 cut(s)	1491
BstACI	GRCGYC	2 cut(s)	19, 489
BstAFI	CTTAAG	1 cut(s)	968
BstAPI	GCANNNNNTGC	1 cut(s)	1304
BstC8I	GCNNGC	3 cut(s)	329, 1782, 1871
BstDSI	CCRYGG	1 cut(s)	711
BstF5I	GGATG	3 cut(s)	683, 1735, 1806
BstFNI	CGCG	4 cut(s)	66, 298, 300, 713
BstH2I	RGCGCY	4 cut(s)	22, 187, 289, 425
BstHHI	GCGC	7 cut(s)	21, 68, 186, 288, 300, 424, 1231
BstMAI	GTCTC	4 cut(s)	79, 387, 680, 1272
BstNI	CCWGG	3 cut(s)	15, 52, 292
BstNSI	RCATGY	1 cut(s)	1784
BstSCI	CCNGG	5 cut(s)	13, 50, 290, 417, 643
BstSLI	GKGCMC	4 cut(s)	60, 222, 863, 1763
BstUI	CGCG	4 cut(s)	66, 298, 300, 713
BstV1I	GCAGC	6 cut(s)	193, 411, 1164, 1225, 1294, 1676
BstV2I	GAAGAC	2 cut(s)	590, 1037
BstX2I	RGATCY	6 cut(s)	526, 532, 538, 882, 1280, 1355
BstYI	RGATCY	6 cut(s)	526, 532, 538, 882, 1280, 1355
Bsu36I	CCTNAGG	1 cut(s)	722
BsuRI	GGCC	8 cut(s)	58, 220, 279, 318, 327, 342, 710, 719
BtgI	CCRYGG	1 cut(s)	711
BtgZI	GCGATG	1 cut(s)	677
BtrI	CACGTC	2 cut(s)	355, 446
BtsCI	GGATG	3 cut(s)	683, 1735, 1806
BtsI	GCAGTG	1 cut(s)	1564
BtsIMutI	CAGTG	6 cut(s)	1290, 1372, 1378, 1564, 1763, 1888
Cac8I	GCNNGC	3 cut(s)	329, 1782, 1871
CaiI	CAGNNNCTG	2 cut(s)	1307, 1615
CfoI	GCGC	7 cut(s)	21, 68, 186, 288, 300, 424, 1231
Cfr10I	RCCGGY	1 cut(s)	318
Cfr13I	GGNCC	6 cut(s)	56, 57, 218, 219, 340, 718
Cfr42I	CCGCGG	1 cut(s)	714
CseI	GACGC	2 cut(s)	304, 1862
CviAII	CATG	5 cut(s)	1498, 1510, 1628, 1781, 1866
DinI	GGCGCC	1 cut(s)	20
EaeI	YGGCCR	3 cut(s)	277, 316, 325
Eam1104I	CTCTTC	1 cut(s)	1491
EarI	CTCTTC	1 cut(s)	1491
EciI	GGCGGA	4 cut(s)	199, 347, 361, 726
Ecl136II	GAGCTC	2 cut(s)	473, 498
Eco130I	CCWWGG	2 cut(s)	1114, 1172
Eco24I	GRGCYC	5 cut(s)	60, 222, 475, 500, 748
Eco53kI	GAGCTC	2 cut(s)	473, 498
Eco57I	CTGAAG	2 cut(s)	1518, 1739
Eco81I	CCTNAGG	1 cut(s)	722
EcoICRI	GAGCTC	2 cut(s)	473, 498
EcoO109I	RGGNCCY	3 cut(s)	56, 218, 718
EcoRII	CCWGG	3 cut(s)	13, 50, 290
EcoT14I	CCWWGG	2 cut(s)	1114, 1172
EcoT22I	ATGCAT	2 cut(s)	1300, 1786
EcoT38I	GRGCYC	5 cut(s)	60, 222, 475, 500, 748
EgeI	GGCGCC	1 cut(s)	20
EheI	GGCGCC	1 cut(s)	20
ErhI	CCWWGG	2 cut(s)	1114, 1172
Esp3I	CGTCTC	1 cut(s)	680
FaeI	CATG	5 cut(s)	1501, 1513, 1631, 1784, 1869
FaqI	GGGAC	1 cut(s)	1422
FatI	CATG	5 cut(s)	1497, 1509, 1627, 1780, 1865
FauI	CCCGC	2 cut(s)	49, 447
FauNDI	CATATG	1 cut(s)	1939
FblI	GTMKAC	1 cut(s)	1995
FokI	GGATG	3 cut(s)	690, 1722, 1813
FriOI	GRGCYC	5 cut(s)	60, 222, 475, 500, 748
FspBI	CTAG	3 cut(s)	165, 1359, 1877
GlaI	GCGC	7 cut(s)	20, 67, 185, 287, 299, 423, 1230
GsaI	CCCAGC	2 cut(s)	365, 592
GsuI	CTGGAG	2 cut(s)	179, 860
HaeII	RGCGCY	4 cut(s)	22, 187, 289, 425
HaeIII	GGCC	8 cut(s)	58, 220, 279, 318, 327, 342, 710, 719
HgaI	GACGC	2 cut(s)	304, 1862
HhaI	GCGC	7 cut(s)	21, 68, 186, 288, 300, 424, 1231
Hin1I	GRCGYC	2 cut(s)	19, 489
Hin1II	CATG	5 cut(s)	1501, 1513, 1631, 1784, 1869
Hin6I	GCGC	7 cut(s)	19, 66, 184, 286, 298, 422, 1229
HinP1I	GCGC	7 cut(s)	19, 66, 184, 286, 298, 422, 1229
HincII	GTYRAC	1 cut(s)	1796
HindII	GTYRAC	1 cut(s)	1796
HinfI	GANTC	8 cut(s)	124, 134, 368, 380, 512, 872, 931, 1612
HphI	GGTGA	4 cut(s)	377, 400, 932, 1958
Hpy166II	GTNNAC	2 cut(s)	1796, 1996
Hpy188I	TCNGA	8 cut(s)	123, 517, 895, 1086, 1350, 1537, 1617, 1811
Hpy8I	GTNNAC	2 cut(s)	1796, 1996
Hpy99I	CGWCG	3 cut(s)	488, 491, 494
HpyAV	CCTTC	8 cut(s)	38, 107, 331, 624, 700, 892, 971, 1956
HpyCH4III	ACNGT	3 cut(s)	1373, 1505, 1823
HpyCH4IV	ACGT	3 cut(s)	354, 445, 489
HpySE526I	ACGT	3 cut(s)	354, 445, 489
Hsp92I	GRCGYC	2 cut(s)	19, 489
Hsp92II	CATG	5 cut(s)	1501, 1513, 1631, 1784, 1869
HspAI	GCGC	7 cut(s)	19, 66, 184, 286, 298, 422, 1229
KasI	GGCGCC	1 cut(s)	18
Kpn2I	TCCGGA	4 cut(s)	523, 529, 535, 541
KspI	CCGCGG	1 cut(s)	714
LmnI	GCTCC	6 cut(s)	178, 242, 265, 503, 526, 1811
Lsp1109I	GCAGC	6 cut(s)	193, 411, 1164, 1225, 1294, 1676
LweI	GCATC	9 cut(s)	508, 817, 1205, 1285, 1307, 1371, 1663, 1744, 1793
MaeI	CTAG	3 cut(s)	165, 1359, 1877
MaeII	ACGT	3 cut(s)	354, 445, 489
MaeIII	GTNAC	7 cut(s)	305, 406, 503, 1367, 1559, 1724, 1749
MbiI	CCGCTC	1 cut(s)	1353
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	6 cut(s)	526, 532, 538, 882, 1280, 1355
MhlI	GDGCHC	7 cut(s)	60, 222, 475, 500, 748, 863, 1763
MlsI	TGGCCA	1 cut(s)	327
MluNI	TGGCCA	1 cut(s)	327
Mly113I	GGCGCC	1 cut(s)	19
MlyI	GAGTC	3 cut(s)	118, 389, 940
MmeI	TCCRAC	1 cut(s)	483
Mox20I	TGGCCA	1 cut(s)	327
Mph1103I	ATGCAT	2 cut(s)	1300, 1786
MroI	TCCGGA	4 cut(s)	523, 529, 535, 541
MscI	TGGCCA	1 cut(s)	327
MseI	TTAA	5 cut(s)	969, 1247, 1623, 1685, 1715
MslI	CAYNNNNRTG	4 cut(s)	569, 856, 1451, 1756
Msp20I	TGGCCA	1 cut(s)	327
MspA1I	CMGCKG	2 cut(s)	713, 1238
MspCI	CTTAAG	1 cut(s)	968
MspR9I	CCNGG	5 cut(s)	15, 52, 292, 419, 645
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	2 cut(s)	1266, 1377
MvaI	CCWGG	3 cut(s)	15, 52, 292
MvnI	CGCG	4 cut(s)	66, 298, 300, 713
NarI	GGCGCC	1 cut(s)	19
NciI	CCSGG	2 cut(s)	419, 645
NdeI	CATATG	1 cut(s)	1939
NlaIII	CATG	5 cut(s)	1501, 1513, 1631, 1784, 1869
NmeAIII	GCCGAG	1 cut(s)	765
NmuCI	GTSAC	4 cut(s)	406, 1367, 1559, 1749
NsiI	ATGCAT	2 cut(s)	1300, 1786
NspI	RCATGY	1 cut(s)	1784
OliI	CACNNNNGTG	2 cut(s)	569, 1756
PaeI	GCATGC	1 cut(s)	1784
PasI	CCCWGGG	1 cut(s)	14
PcsI	WCGNNNNNNNCGW	3 cut(s)	489, 513, 760
PctI	GAATGC	2 cut(s)	1266, 1377
PfeI	GAWTC	5 cut(s)	134, 368, 512, 872, 1612
PflFI	GACNNNGTC	1 cut(s)	488
PleI	GAGTC	3 cut(s)	118, 388, 939
PluTI	GGCGCC	1 cut(s)	22
PpsI	GAGTC	3 cut(s)	118, 388, 939
Psp124BI	GAGCTC	2 cut(s)	475, 500
Psp6I	CCWGG	3 cut(s)	13, 50, 290
PspFI	CCCAGC	2 cut(s)	361, 588
PspGI	CCWGG	3 cut(s)	13, 50, 290
PspOMI	GGGCCC	2 cut(s)	56, 218
PspPI	GGNCC	6 cut(s)	56, 57, 218, 219, 340, 718
PstNI	CAGNNNCTG	2 cut(s)	1307, 1615
PsuI	RGATCY	6 cut(s)	526, 532, 538, 882, 1280, 1355
PsyI	GACNNNGTC	1 cut(s)	488
PvuII	CAGCTG	1 cut(s)	1238
RseI	CAYNNNNRTG	4 cut(s)	569, 856, 1451, 1756
SacI	GAGCTC	2 cut(s)	475, 500
SacII	CCGCGG	1 cut(s)	714
SaqAI	TTAA	5 cut(s)	969, 1247, 1623, 1685, 1715
Sau96I	GGNCC	6 cut(s)	56, 57, 218, 219, 340, 718
SchI	GAGTC	3 cut(s)	118, 389, 940
ScrFI	CCNGG	5 cut(s)	15, 52, 292, 419, 645
SduI	GDGCHC	7 cut(s)	60, 222, 475, 500, 748, 863, 1763
SfaNI	GCATC	9 cut(s)	508, 817, 1205, 1285, 1307, 1371, 1663, 1744, 1793
SfiI	GGCCNNNNNGGCC	2 cut(s)	324, 716
SfoI	GGCGCC	1 cut(s)	20
Sfr303I	CCGCGG	1 cut(s)	714
SgrBI	CCGCGG	1 cut(s)	714
SmiMI	CAYNNNNRTG	4 cut(s)	569, 856, 1451, 1756
SmlI	CTYRAG	1 cut(s)	968
SmoI	CTYRAG	1 cut(s)	968
SphI	GCATGC	1 cut(s)	1784
SspDI	GGCGCC	1 cut(s)	18
SspI	AATATT	1 cut(s)	1840
SspMI	CTAG	3 cut(s)	165, 1359, 1877
SstI	GAGCTC	2 cut(s)	475, 500
StyD4I	CCNGG	5 cut(s)	13, 50, 290, 417, 643
StyI	CCWWGG	2 cut(s)	1114, 1172
TaaI	ACNGT	3 cut(s)	1373, 1505, 1823
TaiI	ACGT	3 cut(s)	357, 448, 492
TaqI	TCGA	6 cut(s)	483, 492, 549, 763, 910, 1633
TauI	GCSGC	8 cut(s)	215, 303, 377, 430, 643, 662, 713, 1978
TfiI	GAWTC	5 cut(s)	134, 368, 512, 872, 1612
Tru1I	TTAA	5 cut(s)	969, 1247, 1623, 1685, 1715
Tru9I	TTAA	5 cut(s)	969, 1247, 1623, 1685, 1715
TscAI	CASTG	6 cut(s)	1297, 1372, 1378, 1564, 1763, 1888
TseFI	GTSAC	4 cut(s)	406, 1367, 1559, 1749
TseI	GCWGC	6 cut(s)	181, 424, 1177, 1238, 1307, 1689
Tsp45I	GTSAC	4 cut(s)	406, 1367, 1559, 1749
TspDTI	ATGAA	5 cut(s)	24, 939, 1002, 1037, 1563
TspGWI	ACGGA	3 cut(s)	522, 581, 1813
TspRI	CASTG	6 cut(s)	1297, 1372, 1378, 1564, 1763, 1888
Tth111I	GACNNNGTC	1 cut(s)	488
Vha464I	CTTAAG	1 cut(s)	968
XapI	RAATTY	3 cut(s)	154, 1717, 1765
XbaI	TCTAGA	1 cut(s)	164
XceI	RCATGY	1 cut(s)	1784
XmiI	GTMKAC	1 cut(s)	1995
XspI	CTAG	3 cut(s)	165, 1359, 1877
ZraI	GACGTC	1 cut(s)	490
Zsp2I	ATGCAT	2 cut(s)	1300, 1786

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.