Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0015202

Physical Location & Seq

Genomic Coordinates Forward (+)

22067564 .. 22070962

Gene Structure 3399 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g19170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGCAGCAGCGCCACCACCAACCCCCAAACCAACCCCATTTCTCCGCCGCCTCGGGTCCCGCCACTCCGTTGGGCTCCCTCGCCATCCTCCCTTCTTCCAGCTCAGAGGCGAAGCGCGGAAAGAGGCGCGGTAGTTACAGCTGCGGCCGATGCGGCCAGCCGAAGAAGGGCCACAAGTGCCACCTCCCCGCCAACTCCACCGCCGATGAATCGTTGGTCGATGAGGAGCCCTCCCCTTCTCTCTCCGTCACCCGCCCCCCTCCGCCGCCACGTCTGCCCTACTCCCACCTCCGCCGAGCGCTATCGTTCGATGACGATGTGGATAGTTCTGGATACGGCGGAGGATGCGGAGACTTTGACTCTCCAGATCCGGACCCTGACGAGTTCGGAGACTCCGGGGACGATATAGATTTGGCTACGGGTTTGGGCGGTCTGCCGGCGAGCTGTCTTTGGGATATTTTGAAGAGGTTGCCGCCGCCGGGGCTGTTGTCGGCGGCGATGGTGTGCAAGGGGTGGAGGGAGACGACGCGGAGGCTGTGGAAGGCGGCTGAGATGCTTAGGATTAGGGTTCCGGCTAGGGCTCAGGTCGGGTTTGTTGGATCGGTGTTGCAGAAATGCCCGAGCCTCGTGAACCTCTCTCTTAGGATGGAAAGTGATGTGGATGCAACATTGCTGGCGTGGATTACATTTTCATGCCCAAATCTTGAGTTCTTGGAGATCAATACTACCGGAAGCGCTATCAATCGGATCACCGGTGATGAACTGGGTCGTTTCGTTGCTGATCGACGATTACTGAAAAGCCTTAAGATGGAAGGTTGTTCTAACCTAGGTGGATTTGCTCTCTGTTCATCAAGTCTTTCTACAATTTGGCTTTCGGGTCTTCACTCCCTCTCTAAGATGGTTTTCAATTGTCCCAATCTAAAAGAGATTTCTGTAGACTTTTCTCGCCAAGAAAATGATAATACTGACCTTGTTACCATGGCTGATGTGCTGGGAAGGAATTGCCCAAGGTTACAAAACATACACATTGCATCAATCCGGCTTTCCAACGCTGTGGTGCTTGCCCTTACAGCCGCAAAGCTAAGGGGGTTGAGAATGCTTTCTCTTGTCCTTGGATCTGAAATCACTGATGCATCTGTTGCTGCCATTGCTTCGAGTTACCAGAACTTAGAATTGCTTGATCTGAGTGGATCTAGCATCAGCGATAGTGGCATTGGAATTATTTGCAACGTGTTCCCTGATACTCTATCGAGACTACTCGTTGCTCTTTGCCCTAATATCAGCTCAAGTTTCATTCAATTTGCTACCGCGCAACTGCCTCTGCTTGAACTCCTGGACTGTGGCATGACCATATGCGATCCCAATTCTCCTGATTCACCCTCTGATGAAACCAATGTCCGTGAACTCCCCGAAGCATCCAATGCCAAAGTACACCATAGTTACCAGAAGCTGATTATCAAACATGCCCGGTTGAAAAAACTGAGCTTGTGGGGTTGTTCTGGCTTAGATGCTCTATATTTAAACTGCCGAGAACTCAACGACCTGAACTTGAATTATTGCAAAAATTTGTACCCAGAGAGATTGGTGCTTCAGTGTCCCAATTTAGAAAATGTGCATGCATCAGGTTGTCAAGAACTGTTGATTGGGGCCATTCAGAGCCAGATTGATAACAATGCTGGTGCGGATAACCTATTACCATGCAAGCGCCTAGCTGATGGCTCGAAGAGGGTCGGGGTGCCTCATTTTCTCAGCGCTGCGCAGGCATCAGACGATGATAAGAAGCGAAGAAAGATCGAGAGGCGGAAGTGCAGTGTGCTTGTATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000278 GO:0000280 GO:0001673 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0006996 GO:0007049 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010498 GO:0016043 GO:0019005 GO:0019538 GO:0019941 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030163 GO:0031146 GO:0031461 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0043073 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048285 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051603 GO:0051704 GO:0055047 GO:0061458 GO:0071704 GO:0071840 GO:0140014 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

609

Amino Acids

65.87

Weight (kDa)

6.87

Isoelectric Point (pI)

50.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	144 - 181	1.6e-06	F-box-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54650
fragaria_vesca	FvH4_2g22510
malus_domestica	MD05G1205600.v1.1 MD10G1192800.v1.1
prunus_persica	Prupe.8G232000_v2.0.a1
pyrus_communis	pycom05g19170 pycom10g16630 pycom10g16640
rosa_chinensis	RchiOBHm_Chr6g0289551
rosa_laevigata	RLG00000012294
rosa_roxburghii	Rroxscaffold_7G00177870
rosa_rugosa	Rorug06G0204300
rosa_samantha	Rh6AG316000 Rh6CG329000 Rh6DG314700
rosa_wichuraiana	Rw6G027250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1758
AccB1I	GGYRCC	1 cut(s)	1735
AccI	GTMKAC	1 cut(s)	936
AccII	CGCG	4 cut(s)	117, 129, 529, 1310
AccIII	TCCGGA	1 cut(s)	370
AclWI	GGATC	6 cut(s)	362, 607, 755, 1123, 1198, 1352
AcoI	YGGCCR	2 cut(s)	145, 154
AcsI	RAATTY	1 cut(s)	1564
AcuI	CTGAAG	1 cut(s)	1574
AfaI	GTAC	2 cut(s)	1431, 1571
AfeI	AGCGCT	3 cut(s)	300, 736, 1753
AfiI	CCNNNNNNNGG	3 cut(s)	167, 479, 808
AflII	CTTAAG	1 cut(s)	803
AflIII	ACRYGT	1 cut(s)	1230
AgeI	ACCGGT	1 cut(s)	752
AgsI	TTSAA	6 cut(s)	463, 907, 1298, 1328, 1474, 1552
AjiI	CACGTC	1 cut(s)	272
AjnI	CCWGG	1 cut(s)	1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1626, 1658
AluBI	AGCT	8 cut(s)	102, 141, 444, 1081, 1284, 1450, 1485, 1712
AluI	AGCT	8 cut(s)	102, 141, 444, 1081, 1284, 1450, 1485, 1712
Alw26I	GTCTC	4 cut(s)	345, 384, 515, 1246
AlwI	GGATC	6 cut(s)	362, 607, 755, 1123, 1198, 1352
AlwNI	CAGNNNCTG	1 cut(s)	1450
Ama87I	CYCGRG	2 cut(s)	52, 619
Aor13HI	TCCGGA	1 cut(s)	370
Aor51HI	AGCGCT	3 cut(s)	300, 736, 1753
AoxI	GGCC	4 cut(s)	145, 154, 169, 1647
ApeKI	GCWGC	5 cut(s)	4, 7, 141, 1142, 1754
ApoI	RAATTY	1 cut(s)	1564
AsiGI	ACCGGT	1 cut(s)	752
Asp700I	GAANNNNTTC	1 cut(s)	1099
AspA2I	CCTAGG	1 cut(s)	826
AspLEI	GCGC	9 cut(s)	12, 117, 129, 301, 737, 1312, 1707, 1754, 1759
AspS9I	GGNCC	4 cut(s)	56, 169, 373, 1647
AsuC2I	CCSGG	3 cut(s)	397, 480, 1468
AsuHPI	GGTGA	4 cut(s)	241, 742, 767, 1368
AvaI	CYCGRG	2 cut(s)	52, 619
AvaII	GGWCC	2 cut(s)	56, 373
AvrII	CCTAGG	1 cut(s)	826
BanI	GGYRCC	1 cut(s)	1735
BanII	GRGCYC	3 cut(s)	77, 231, 583
BauI	CACGAG	1 cut(s)	626
BbsI	GAAGAC	1 cut(s)	872
BbvI	GCAGC	5 cut(s)	16, 19, 128, 1129, 1741
BccI	CCATC	6 cut(s)	92, 493, 640, 802, 892, 1709
BceAI	ACGGC	1 cut(s)	352
BciT130I	CCWGG	1 cut(s)	1334
BciVI	GTATCC	1 cut(s)	326
BcnI	CCSGG	3 cut(s)	397, 480, 1468
BcoDI	GTCTC	4 cut(s)	345, 384, 515, 1246
BfaI	CTAG	4 cut(s)	576, 827, 1194, 1709
BfmI	CTRYAG	1 cut(s)	933
BfoI	RGCGCY	5 cut(s)	13, 302, 738, 1708, 1755
BfrI	CTTAAG	1 cut(s)	803
BfuI	GTATCC	1 cut(s)	326
BglI	GCCNNNNNGGC	2 cut(s)	153, 481
BlnI	CCTAGG	1 cut(s)	826
Bme1390I	CCNGG	4 cut(s)	397, 480, 1334, 1468
Bme18I	GGWCC	2 cut(s)	56, 373
BmeT110I	CYCGRG	2 cut(s)	52, 619
BmgBI	CACGTC	1 cut(s)	272
BmgT120I	GGNCC	4 cut(s)	56, 169, 373, 1647
BmiI	GGNNCC	8 cut(s)	57, 58, 76, 228, 375, 570, 1648, 1737
BmrFI	CCNGG	4 cut(s)	397, 480, 1334, 1468
BmrI	ACTGGG	1 cut(s)	773
BmuI	ACTGGG	1 cut(s)	773
BpiI	GAAGAC	1 cut(s)	872
BplI	GAGNNNNNCTC	2 cut(s)	215, 247
BpmI	CTGGAG	1 cut(s)	348
Bpu10I	CCTNAGC	3 cut(s)	557, 582, 1082
BpuEI	CTTGAG	2 cut(s)	725, 1270
BpuMI	CCSGG	3 cut(s)	397, 480, 1468
BsaJI	CCNNGG	7 cut(s)	51, 396, 479, 826, 978, 1007, 1111
BsaWI	WCCGGW	3 cut(s)	370, 728, 752
Bsc4I	CCNNNNNNNGG	3 cut(s)	167, 479, 808
Bse118I	RCCGGY	2 cut(s)	436, 752
Bse1I	ACTGG	1 cut(s)	768
Bse3DI	GCAATG	3 cut(s)	668, 1026, 1146
BseAI	TCCGGA	1 cut(s)	370
BseBI	CCWGG	1 cut(s)	1334
BseDI	CCNNGG	7 cut(s)	51, 396, 479, 826, 978, 1007, 1111
BseGI	GGATG	5 cut(s)	84, 350, 651, 667, 1415
BseLI	CCNNNNNNNGG	3 cut(s)	167, 479, 808
BseMI	GCAATG	3 cut(s)	668, 1026, 1146
BseMII	CTCAG	6 cut(s)	117, 540, 596, 1175, 1472, 1762
BseNI	ACTGG	1 cut(s)	768
BseRI	GAGGAG	1 cut(s)	239
BseX3I	CGGCCG	1 cut(s)	145
BseXI	GCAGC	5 cut(s)	16, 19, 128, 1129, 1741
BseYI	CCCAGC	1 cut(s)	991
Bsh1236I	CGCG	4 cut(s)	117, 129, 529, 1310
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	4 cut(s)	147, 156, 171, 1649
BshNI	GGYRCC	1 cut(s)	1735
BshTI	ACCGGT	1 cut(s)	752
BsiEI	CGRYCG	1 cut(s)	148
BsiHKCI	CYCGRG	2 cut(s)	52, 619
BsiSI	CCGG	9 cut(s)	371, 396, 437, 479, 572, 729, 753, 1039, 1468
BslFI	GGGAC	4 cut(s)	42, 413, 897, 1581
BslI	CCNNNNNNNGG	3 cut(s)	167, 479, 808
BsmAI	GTCTC	4 cut(s)	345, 384, 515, 1246
BsmBI	CGTCTC	1 cut(s)	515
BsmFI	GGGAC	4 cut(s)	42, 413, 897, 1581
BsmI	GAATGC	1 cut(s)	1101
BsnI	GGCC	4 cut(s)	147, 156, 171, 1649
BsoBI	CYCGRG	2 cut(s)	52, 619
Bsp1286I	GDGCHC	3 cut(s)	77, 231, 583
Bsp13I	TCCGGA	1 cut(s)	370
Bsp19I	CCATGG	1 cut(s)	978
BspANI	GGCC	4 cut(s)	147, 156, 171, 1649
BspCNI	CTCAG	6 cut(s)	116, 541, 595, 1176, 1473, 1761
BspEI	TCCGGA	1 cut(s)	370
BspFNI	CGCG	4 cut(s)	117, 129, 529, 1310
BspLI	GGNNCC	8 cut(s)	57, 58, 76, 228, 375, 570, 1648, 1737
BspPI	GGATC	6 cut(s)	362, 607, 755, 1123, 1198, 1352
BspT107I	GGYRCC	1 cut(s)	1735
BspTI	CTTAAG	1 cut(s)	803
BsrDI	GCAATG	3 cut(s)	668, 1026, 1146
BsrFI	RCCGGY	2 cut(s)	436, 752
BsrI	ACTGG	1 cut(s)	768
BssAI	RCCGGY	2 cut(s)	436, 752
BssECI	CCNNGG	7 cut(s)	51, 396, 479, 826, 978, 1007, 1111
BssSI	CACGAG	1 cut(s)	626
BssT1I	CCWWGG	4 cut(s)	826, 978, 1007, 1111
Bst2BI	CACGAG	1 cut(s)	626
Bst2UI	CCWGG	1 cut(s)	1334
Bst4CI	ACNGT	2 cut(s)	1340, 1638
Bst6I	CTCTTC	2 cut(s)	458, 1718
BstAFI	CTTAAG	1 cut(s)	803
BstAPI	GCANNNNNTGC	2 cut(s)	1139, 1421
BstC8I	GCNNGC	8 cut(s)	158, 438, 442, 675, 1062, 1617, 1703, 1761
BstDSI	CCRYGG	1 cut(s)	978
BstF5I	GGATG	5 cut(s)	84, 350, 651, 667, 1415
BstFNI	CGCG	4 cut(s)	117, 129, 529, 1310
BstH2I	RGCGCY	5 cut(s)	13, 302, 738, 1708, 1755
BstHHI	GCGC	9 cut(s)	12, 117, 129, 301, 737, 1312, 1707, 1754, 1759
BstMAI	GTCTC	4 cut(s)	345, 384, 515, 1246
BstMCI	CGRYCG	1 cut(s)	148
BstNI	CCWGG	1 cut(s)	1334
BstNSI	RCATGY	2 cut(s)	1466, 1619
BstSCI	CCNGG	4 cut(s)	395, 478, 1332, 1466
BstSFI	CTRYAG	1 cut(s)	933
BstUI	CGCG	4 cut(s)	117, 129, 529, 1310
BstV1I	GCAGC	5 cut(s)	16, 19, 128, 1129, 1741
BstV2I	GAAGAC	1 cut(s)	872
BstX2I	RGATCY	3 cut(s)	367, 1115, 1190
BstXI	CCANNNNNNTGG	2 cut(s)	70, 1054
BstYI	RGATCY	3 cut(s)	367, 1115, 1190
BstZI	CGGCCG	1 cut(s)	145
BsuI	GTATCC	1 cut(s)	326
BsuRI	GGCC	4 cut(s)	147, 156, 171, 1649
BtgI	CCRYGG	1 cut(s)	978
BtgZI	GCGATG	1 cut(s)	512
BtrI	CACGTC	1 cut(s)	272
BtsCI	GGATG	5 cut(s)	84, 350, 651, 667, 1415
BtsI	GCAGTG	1 cut(s)	1816
BtsIMutI	CAGTG	3 cut(s)	1125, 1598, 1816
Cac8I	GCNNGC	8 cut(s)	158, 438, 442, 675, 1062, 1617, 1703, 1761
CaiI	CAGNNNCTG	1 cut(s)	1450
CfoI	GCGC	9 cut(s)	12, 117, 129, 301, 737, 1312, 1707, 1754, 1759
Cfr10I	RCCGGY	2 cut(s)	436, 752
Cfr13I	GGNCC	4 cut(s)	56, 169, 373, 1647
CseI	GACGC	1 cut(s)	535
Csp6I	GTAC	2 cut(s)	1430, 1570
CspAI	ACCGGT	1 cut(s)	752
CviAII	CATG	6 cut(s)	693, 979, 1345, 1463, 1616, 1698
CviQI	GTAC	2 cut(s)	1430, 1570
DraI	TTTAAA	1 cut(s)	1521
EaeI	YGGCCR	2 cut(s)	145, 154
EagI	CGGCCG	1 cut(s)	145
Eam1104I	CTCTTC	2 cut(s)	458, 1718
EarI	CTCTTC	2 cut(s)	458, 1718
EciI	GGCGGA	5 cut(s)	34, 252, 281, 354, 1816
EclXI	CGGCCG	1 cut(s)	145
Eco130I	CCWWGG	4 cut(s)	826, 978, 1007, 1111
Eco24I	GRGCYC	3 cut(s)	77, 231, 583
Eco47I	GGWCC	2 cut(s)	56, 373
Eco47III	AGCGCT	3 cut(s)	300, 736, 1753
Eco52I	CGGCCG	1 cut(s)	145
Eco57I	CTGAAG	1 cut(s)	1574
Eco88I	CYCGRG	2 cut(s)	52, 619
EcoO109I	RGGNCCY	1 cut(s)	56
EcoRII	CCWGG	1 cut(s)	1332
EcoT14I	CCWWGG	4 cut(s)	826, 978, 1007, 1111
EcoT22I	ATGCAT	2 cut(s)	1135, 1621
EcoT38I	GRGCYC	3 cut(s)	77, 231, 583
ErhI	CCWWGG	4 cut(s)	826, 978, 1007, 1111
Esp3I	CGTCTC	1 cut(s)	515
FaeI	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
FaqI	GGGAC	4 cut(s)	42, 413, 897, 1581
FatI	CATG	6 cut(s)	692, 978, 1344, 1462, 1615, 1697
FauI	CCCGC	3 cut(s)	67, 196, 260
FauNDI	CATATG	1 cut(s)	1352
FblI	GTMKAC	1 cut(s)	936
FokI	GGATG	5 cut(s)	71, 357, 658, 674, 1402
FriOI	GRGCYC	3 cut(s)	77, 231, 583
FspBI	CTAG	4 cut(s)	576, 827, 1194, 1709
FspI	TGCGCA	1 cut(s)	1758
GlaI	GCGC	9 cut(s)	11, 116, 128, 300, 736, 1311, 1706, 1753, 1758
GsaI	CCCAGC	1 cut(s)	995
GsuI	CTGGAG	1 cut(s)	348
HaeII	RGCGCY	5 cut(s)	13, 302, 738, 1708, 1755
HaeIII	GGCC	4 cut(s)	147, 156, 171, 1649
HapII	CCGG	9 cut(s)	371, 396, 437, 479, 572, 729, 753, 1039, 1468
HgaI	GACGC	1 cut(s)	535
HhaI	GCGC	9 cut(s)	12, 117, 129, 301, 737, 1312, 1707, 1754, 1759
Hin1II	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
Hin6I	GCGC	9 cut(s)	10, 115, 127, 299, 735, 1310, 1705, 1752, 1757
HinP1I	GCGC	9 cut(s)	10, 115, 127, 299, 735, 1310, 1705, 1752, 1757
HinfI	GANTC	4 cut(s)	209, 359, 392, 1373
HpaII	CCGG	9 cut(s)	371, 396, 437, 479, 572, 729, 753, 1039, 1468
HphI	GGTGA	4 cut(s)	241, 742, 767, 1368
Hpy166II	GTNNAC	4 cut(s)	631, 937, 1403, 1432
Hpy188I	TCNGA	8 cut(s)	106, 389, 747, 1120, 1185, 1384, 1656, 1768
Hpy188III	TCNNGA	9 cut(s)	330, 365, 371, 628, 704, 1251, 1370, 1631, 1795
Hpy8I	GTNNAC	4 cut(s)	631, 937, 1403, 1432
Hpy99I	CGWCG	2 cut(s)	529, 789
HpyAV	CCTTC	6 cut(s)	102, 160, 246, 535, 806, 990
HpyCH4III	ACNGT	2 cut(s)	1340, 1638
HpyCH4IV	ACGT	2 cut(s)	271, 1230
HpySE526I	ACGT	2 cut(s)	271, 1230
Hsp92II	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
HspAI	GCGC	9 cut(s)	10, 115, 127, 299, 735, 1310, 1705, 1752, 1757
KflI	GGGWCCC	1 cut(s)	56
Kpn2I	TCCGGA	1 cut(s)	370
KroI	GCCGGC	1 cut(s)	436
KroNI	GCCGGC	1 cut(s)	438
LmnI	GCTCC	2 cut(s)	80, 226
Lsp1109I	GCAGC	5 cut(s)	16, 19, 128, 1129, 1741
MaeI	CTAG	4 cut(s)	576, 827, 1194, 1709
MaeII	ACGT	2 cut(s)	271, 1230
MaeIII	GTNAC	6 cut(s)	134, 247, 973, 1011, 1157, 1439
MboII	GAAGA	6 cut(s)	87, 175, 475, 872, 1735, 1797
MfeI	CAATTG	1 cut(s)	907
MflI	RGATCY	3 cut(s)	367, 1115, 1190
MhlI	GDGCHC	3 cut(s)	77, 231, 583
MlyI	GAGTC	2 cut(s)	353, 386
MmeI	TCCRAC	2 cut(s)	577, 1071
Mph1103I	ATGCAT	2 cut(s)	1135, 1621
MroI	TCCGGA	1 cut(s)	370
MroNI	GCCGGC	1 cut(s)	436
MroXI	GAANNNNTTC	1 cut(s)	1099
MseI	TTAA	2 cut(s)	804, 1520
MslI	CAYNNNNRTG	1 cut(s)	691
MspA1I	CMGCKG	1 cut(s)	141
MspCI	CTTAAG	1 cut(s)	803
MspI	CCGG	9 cut(s)	371, 396, 437, 479, 572, 729, 753, 1039, 1468
MspR9I	CCNGG	4 cut(s)	397, 480, 1334, 1468
MteI	GCGCNGCGC	1 cut(s)	1755
MunI	CAATTG	1 cut(s)	907
Mva1269I	GAATGC	1 cut(s)	1101
MvaI	CCWGG	1 cut(s)	1334
MvnI	CGCG	4 cut(s)	117, 129, 529, 1310
NaeI	GCCGGC	1 cut(s)	438
NciI	CCSGG	3 cut(s)	397, 480, 1468
NcoI	CCATGG	1 cut(s)	978
NdeI	CATATG	1 cut(s)	1352
NgoMIV	GCCGGC	1 cut(s)	436
NlaIII	CATG	6 cut(s)	696, 982, 1348, 1466, 1619, 1701
NlaIV	GGNNCC	8 cut(s)	57, 58, 76, 228, 375, 570, 1648, 1737
NmeAIII	GCCGAG	2 cut(s)	320, 1553
NmuCI	GTSAC	1 cut(s)	247
NsbI	TGCGCA	1 cut(s)	1758
NsiI	ATGCAT	2 cut(s)	1135, 1621
NspI	RCATGY	2 cut(s)	1466, 1619
PaeI	GCATGC	1 cut(s)	1619
PctI	GAATGC	1 cut(s)	1101
PdiI	GCCGGC	1 cut(s)	438
PdmI	GAANNNNTTC	1 cut(s)	1099
PfeI	GAWTC	2 cut(s)	209, 1373
PfoI	TCCNGGA	1 cut(s)	1332
PinAI	ACCGGT	1 cut(s)	752
PleI	GAGTC	2 cut(s)	353, 386
PpsI	GAGTC	2 cut(s)	353, 386
PpuMI	RGGWCCY	1 cut(s)	56
Psp5II	RGGWCCY	1 cut(s)	56
Psp6I	CCWGG	1 cut(s)	1332
PspFI	CCCAGC	1 cut(s)	991
PspGI	CCWGG	1 cut(s)	1332
PspN4I	GGNNCC	8 cut(s)	57, 58, 76, 228, 375, 570, 1648, 1737
PspPI	GGNCC	4 cut(s)	56, 169, 373, 1647
PspPPI	RGGWCCY	1 cut(s)	56
PstNI	CAGNNNCTG	1 cut(s)	1450
PsuI	RGATCY	3 cut(s)	367, 1115, 1190
PvuII	CAGCTG	1 cut(s)	141
RsaI	GTAC	2 cut(s)	1431, 1571
RsaNI	GTAC	2 cut(s)	1430, 1570
RseI	CAYNNNNRTG	1 cut(s)	691
SaqAI	TTAA	2 cut(s)	804, 1520
Sau96I	GGNCC	4 cut(s)	56, 169, 373, 1647
SchI	GAGTC	2 cut(s)	353, 386
ScrFI	CCNGG	4 cut(s)	397, 480, 1334, 1468
SduI	GDGCHC	3 cut(s)	77, 231, 583
SfcI	CTRYAG	1 cut(s)	933
SfiI	GGCCNNNNNGGCC	1 cut(s)	153
SgrAI	CRCCGGYG	1 cut(s)	752
SinI	GGWCC	2 cut(s)	56, 373
SmiMI	CAYNNNNRTG	1 cut(s)	691
SmlI	CTYRAG	3 cut(s)	704, 803, 1285
SmoI	CTYRAG	3 cut(s)	704, 803, 1285
SphI	GCATGC	1 cut(s)	1619
SspMI	CTAG	4 cut(s)	576, 827, 1194, 1709
StyD4I	CCNGG	4 cut(s)	395, 478, 1332, 1466
StyI	CCWWGG	4 cut(s)	826, 978, 1007, 1111
TaaI	ACNGT	2 cut(s)	1340, 1638
TaiI	ACGT	2 cut(s)	274, 1233
TaqI	TCGA	7 cut(s)	219, 309, 784, 1154, 1250, 1721, 1794
TatI	WGTACW	1 cut(s)	1429
TauI	GCSGC	9 cut(s)	50, 147, 156, 268, 475, 478, 497, 548, 1076
TfiI	GAWTC	2 cut(s)	209, 1373
Tru1I	TTAA	2 cut(s)	804, 1520
Tru9I	TTAA	2 cut(s)	804, 1520
TscAI	CASTG	3 cut(s)	1132, 1598, 1816
TseFI	GTSAC	1 cut(s)	247
TseI	GCWGC	5 cut(s)	4, 7, 141, 1142, 1754
Tsp45I	GTSAC	1 cut(s)	247
TspDTI	ATGAA	6 cut(s)	222, 681, 774, 837, 1282, 1401
TspGWI	ACGGA	3 cut(s)	57, 235, 1388
TspRI	CASTG	3 cut(s)	1132, 1598, 1816
Vha464I	CTTAAG	1 cut(s)	803
VpaK11BI	GGWCC	2 cut(s)	56, 373
XapI	RAATTY	1 cut(s)	1564
XceI	RCATGY	2 cut(s)	1466, 1619
XmaJI	CCTAGG	1 cut(s)	826
XmiI	GTMKAC	1 cut(s)	936
XmnI	GAANNNNTTC	1 cut(s)	1099
XspI	CTAG	4 cut(s)	576, 827, 1194, 1709
Zsp2I	ATGCAT	2 cut(s)	1135, 1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.