Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0012808

Physical Location & Seq

Genomic Coordinates Reverse (-)

43126212 .. 43130469

Gene Structure 4258 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1297400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGAAAACAACTGTGTAAAAAAGCTGCTTTTTGGCTTCTGCTTCTTCTGTTTGTGTGTGCCATTGGCTACTGCTTCTGACAGCCTTCTCTCTCCCAAAGGTGTCAACTTTGAAGTGGCGGCATTGATGTCGGTGAAGAGAGATATGAAGGATGAGTTGCCTGTGATGGCCGGTTGGGATATAAACTCCGTTGATCCTTGCACTTGGAACATGGTTGGTTGCTCCACTGAGGGCTTTGTAATCTCCCTTGCAATGGTCAGCACGAATTTATCTGGGATGCTCTCGCCGAGTATTGGGAACTTGAGTCACCTTCAAACACTGTTGTTACAAAACAATCAGTTATCTGGTCCAATCCCGGCTGAGATAGGGTGGCTTTCAGAGCTTCAAACTCTTGACCTCTCGGGTAACCAGTTTTCTGGAGACATTCCGAGCTCTTTGGGGCTTTTGACTCATCTAAGTTACTTGAGGCTGAATAGAAATAAGTTGAGTGGTCATATTCCAAAACTTGTTGCCGATCTCGCAGGTCTTTCATTCTTAGATTTATCGTTTAACAATCTTAGTGGTCCTACACCAAAAATACAGGCAAAAGGCTACAGTGTTACAGGCAATAGCTTTCTTTGCAATCCTTCATCACCAGACTCGGCACAAATCTGCATCGGTGTCTCCAAACCTATAAACGGGACAGGTTCACCACAGAAAGTCAGCAGTCACCACCGATGGGTGCTTTCTGTTGCTCTAGGCATTAGTTGTACATTTGTCATTTCCATAATGCTGCTTGTTTTTTGGGTGCATTGGTTCAGATCTCGTCATCTCTTTACATCTTATGTGCAGCAAGATTATGAATTTGATATTAGTCAATTGAAGAGGTTCTCCTATCGAGAATTGCAAATTGCTACCGGCAATTTCAGTTCCAAAAACATCCTAGGGCAAGGTGGATATGGAGTCGTTTATAAAGGATGTCTTCCAAATAGGACAATGATAGCAGTTAAGAGACTGAGAGATCCAAATTTCACTGGAGAAGTGCAGTTTCAAACTGAAGTTGAAATGATTGGCTTGGCTTTGCATAGAAACCTTTTACGTTTATATGGATTTTGTATGACTCCAAACGAGAGGTTGCTTATTTATCCTTTTATGCCAAATGGAAGTGTTGCTGACCGCTTGAGAGAGACTGGTCAAGAAAAACCATCATTGGATTGGAACAGAAGACTCTGTATCGCCCTTGGGGCAGCCCGTGGACTTCTATACTTGCATGAACAGTGTAATCCAAAAATTATTCACAGGGATGTCAAAGCTGCGAATATTTTACTTGACGAAAGTTATGAAGCTGTGGTTGGGGATTTTGGTCTTGCCAAGCTTTTAGATCGGAGGGAATCACATGTCACTACTGCAGTGCGGGGCACTGTAGGACACATAGCCCCGGAGTATCTCTCAACTGGACAGTCTTCCGAAAAAACTGATGTTTTTGGATTCGGCATACTGCTTCTGGAACTCGTAACCGGCCAAAAGGCATTAGATGCTGGAAATGGTCAAGTTCAGAAGGGAATGATTCTTGATTTGGTTAGAACCCTACATGAGGAGAAAAGGCTTGAAGTGTTAGTAGACCGAGATCTTAAAGGATGTTTCGATGCAATCGAACTGGAACAATGTGTCGAGTTAGCTCTTCAGTGCACTCAATCAAGCCCCATCCTCCGACCAAAGATGTCAGACGTCTTGAAGATTTTGGAAGGCCTTGTTGGGCATTCAGGACATACAGAGGTATCACAAGGCGGAACCAACCTCTTTGAGGCCAGGGCTCATGATTTCTCCAGGACTTGTAGTGATGTGCGTCAAGAGTCGTCTTTCATCATTGAAGCCATGGAACTTTCAGGACCTCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

626

Amino Acids

68.86

Weight (kDa)

6.48

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 75	2.3e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	96 - 181	3.7e-11	Leucine-rich repeat region
Pkinase	PF00069	303 - 572	1.6e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	305 - 573	4.4e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45780 AT5G45780
fragaria_vesca	FvH4_3g07470 FvH4_3g07470 FvH4_3g07470
malus_domestica	MD05G1297400.v1.1 MD10G1277100.v1.1
prunus_persica	Prupe.4G064800_v2.0.a1
pyrus_communis	pycom05g27550 pycom10g23140
rosa_chinensis	RchiOBHm_Chr5g0011381
rosa_laevigata	RLG00000031828
rosa_multiflora	Rmu_sc0009975.1_g000012
rosa_roxburghii	Rroxscaffold_1G00065070
rosa_rugosa	Rorug04G0456700
rosa_samantha	Rh5BG083400 Rh5DG083300
rosa_wichuraiana	Rw5G007670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	951
AatII	GACGTC	1 cut(s)	1710
Acc36I	ACCTGC	1 cut(s)	512
AccI	GTMKAC	1 cut(s)	1599
AciI	CCGC	4 cut(s)	119, 1156, 1393, 1767
AclWI	GGATC	2 cut(s)	188, 995
AcoI	YGGCCR	2 cut(s)	168, 1498
AcsI	RAATTY	3 cut(s)	265, 842, 1006
AcuI	CTGAAG	2 cut(s)	1056, 1646
AcyI	GRCGYC	1 cut(s)	1707
AfaI	GTAC	1 cut(s)	751
AfiI	CCNNNNNNNGG	6 cut(s)	253, 293, 677, 718, 1573, 1783
AflIII	ACRYGT	1 cut(s)	1375
AgsI	TTSAA	9 cut(s)	113, 314, 386, 862, 1031, 1043, 1589, 1714, 1850
AjnI	CCWGG	2 cut(s)	1787, 1805
AjuI	GAANNNNNNNTTGG	4 cut(s)	1314, 1346, 1716, 1748
AluBI	AGCT	8 cut(s)	25, 382, 432, 612, 1292, 1325, 1354, 1658
AluI	AGCT	8 cut(s)	25, 382, 432, 612, 1292, 1325, 1354, 1658
Alw21I	GWGCWC	2 cut(s)	434, 1670
Alw26I	GTCTC	4 cut(s)	414, 667, 985, 1160
Alw44I	GTGCAC	1 cut(s)	1666
AlwI	GGATC	2 cut(s)	188, 995
Ama87I	CYCGRG	1 cut(s)	400
AoxI	GGCC	4 cut(s)	168, 1498, 1726, 1785
ApaLI	GTGCAC	1 cut(s)	1666
ApeKI	GCWGC	5 cut(s)	25, 772, 829, 1226, 1292
ApoI	RAATTY	3 cut(s)	265, 842, 1006
Asp700I	GAANNNNTTC	1 cut(s)	866
AspA2I	CCTAGG	1 cut(s)	922
AspS9I	GGNCC	3 cut(s)	347, 563, 1868
AsuC2I	CCSGG	2 cut(s)	356, 1418
AsuHPI	GGTGA	5 cut(s)	145, 299, 624, 681, 701
AvaI	CYCGRG	1 cut(s)	400
AvaII	GGWCC	3 cut(s)	347, 563, 1868
AvrII	CCTAGG	1 cut(s)	922
BaeGI	GKGCMC	2 cut(s)	1400, 1670
BaeI	ACNNNNGTAYC	2 cut(s)	1740, 1773
BanII	GRGCYC	2 cut(s)	434, 1795
BbsI	GAAGAC	3 cut(s)	953, 1210, 1434
Bbv12I	GWGCWC	2 cut(s)	434, 1670
BbvI	GCAGC	5 cut(s)	12, 759, 841, 1238, 1279
BccI	CCATC	4 cut(s)	160, 711, 1192, 1691
BcgI	CGANNNNNNTGC	2 cut(s)	111, 145
BciT130I	CCWGG	2 cut(s)	1789, 1807
BcnI	CCSGG	2 cut(s)	356, 1418
BcoDI	GTCTC	4 cut(s)	414, 667, 985, 1160
BfaI	CTAG	2 cut(s)	737, 923
BfmI	CTRYAG	3 cut(s)	592, 1386, 1401
BfuAI	ACCTGC	1 cut(s)	512
BglI	GCCNNNNNGGC	1 cut(s)	1223
BglII	AGATCT	2 cut(s)	800, 1606
BisI	GCNGC	6 cut(s)	26, 120, 773, 830, 1227, 1293
BlnI	CCTAGG	1 cut(s)	922
BlsI	GCNGC	6 cut(s)	27, 121, 774, 831, 1228, 1294
Bme1390I	CCNGG	4 cut(s)	356, 1418, 1789, 1807
Bme18I	GGWCC	3 cut(s)	347, 563, 1868
BmeT110I	CYCGRG	1 cut(s)	400
BmgT120I	GGNCC	3 cut(s)	347, 563, 1868
BmiI	GGNNCC	1 cut(s)	1771
BmrFI	CCNGG	4 cut(s)	356, 1418, 1789, 1807
BmsI	GCATC	4 cut(s)	267, 663, 1504, 1615
BpiI	GAAGAC	3 cut(s)	953, 1210, 1434
BplI	GAGNNNNNCTC	2 cut(s)	1412, 1444
BpmI	CTGGAG	3 cut(s)	438, 1035, 1789
BpuEI	CTTGAG	3 cut(s)	322, 484, 1180
BpuMI	CCSGG	2 cut(s)	356, 1418
BsaHI	GRCGYC	1 cut(s)	1707
BsaJI	CCNNGG	7 cut(s)	922, 1219, 1231, 1416, 1788, 1854, 1871
Bsc4I	CCNNNNNNNGG	6 cut(s)	253, 293, 677, 718, 1573, 1783
Bse118I	RCCGGY	3 cut(s)	170, 896, 1496
Bse1I	ACTGG	5 cut(s)	409, 1018, 1174, 1438, 1641
Bse3DI	GCAATG	1 cut(s)	258
BseBI	CCWGG	2 cut(s)	1789, 1807
BseDI	CCNNGG	7 cut(s)	922, 1219, 1231, 1416, 1788, 1854, 1871
BseGI	GGATG	7 cut(s)	157, 282, 918, 962, 1288, 1622, 1683
BseLI	CCNNNNNNNGG	6 cut(s)	253, 293, 677, 718, 1573, 1783
BseMI	GCAATG	1 cut(s)	258
BseMII	CTCAG	3 cut(s)	219, 351, 986
BseNI	ACTGG	5 cut(s)	409, 1018, 1174, 1438, 1641
BseRI	GAGGAG	1 cut(s)	1589
BseSI	GKGCMC	2 cut(s)	1400, 1670
BseXI	GCAGC	5 cut(s)	12, 759, 841, 1238, 1279
BsgI	GTGCAG	2 cut(s)	848, 1043
BshFI	GGCC	4 cut(s)	170, 1500, 1728, 1787
BsiHKAI	GWGCWC	2 cut(s)	434, 1670
BsiHKCI	CYCGRG	1 cut(s)	400
BsiSI	CCGG	5 cut(s)	171, 356, 897, 1418, 1497
BslFI	GGGAC	1 cut(s)	694
BslI	CCNNNNNNNGG	6 cut(s)	253, 293, 677, 718, 1573, 1783
BsmAI	GTCTC	4 cut(s)	414, 667, 985, 1160
BsmFI	GGGAC	1 cut(s)	694
BsmI	GAATGC	1 cut(s)	1738
BsnI	GGCC	4 cut(s)	170, 1500, 1728, 1787
BsoBI	CYCGRG	1 cut(s)	400
Bsp1286I	GDGCHC	4 cut(s)	434, 1400, 1670, 1795
Bsp1407I	TGTACA	1 cut(s)	749
Bsp143I	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
Bsp19I	CCATGG	1 cut(s)	1854
BspACI	CCGC	4 cut(s)	119, 1156, 1393, 1767
BspANI	GGCC	4 cut(s)	170, 1500, 1728, 1787
BspCNI	CTCAG	3 cut(s)	220, 352, 987
BspHI	TCATGA	1 cut(s)	1795
BspLI	GGNNCC	1 cut(s)	1771
BspMAI	CTGCAG	1 cut(s)	1390
BspMI	ACCTGC	1 cut(s)	512
BspPI	GGATC	2 cut(s)	188, 995
BspQI	GCTCTTC	1 cut(s)	1665
BsrDI	GCAATG	1 cut(s)	258
BsrFI	RCCGGY	3 cut(s)	170, 896, 1496
BsrGI	TGTACA	1 cut(s)	749
BsrI	ACTGG	5 cut(s)	409, 1018, 1174, 1438, 1641
BssAI	RCCGGY	3 cut(s)	170, 896, 1496
BssECI	CCNNGG	7 cut(s)	922, 1219, 1231, 1416, 1788, 1854, 1871
BssMI	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
BssNI	GRCGYC	1 cut(s)	1707
BssT1I	CCWWGG	3 cut(s)	922, 1219, 1854
Bst2UI	CCWGG	2 cut(s)	1789, 1807
Bst4CI	ACNGT	6 cut(s)	14, 321, 596, 1257, 1402, 1440
Bst6I	CTCTTC	3 cut(s)	131, 857, 1665
BstACI	GRCGYC	1 cut(s)	1707
BstAPI	GCANNNNNTGC	1 cut(s)	1514
BstAUI	TGTACA	1 cut(s)	749
BstDEI	CTNAG	6 cut(s)	228, 360, 455, 535, 557, 995
BstDSI	CCRYGG	2 cut(s)	1231, 1854
BstEII	GGTNACC	1 cut(s)	404
BstENI	CCTNNNNNAGG	2 cut(s)	1571, 1781
BstF5I	GGATG	7 cut(s)	157, 282, 918, 962, 1288, 1622, 1683
BstKTI	GATC	6 cut(s)	196, 517, 803, 1003, 1363, 1609
BstMAI	GTCTC	4 cut(s)	414, 667, 985, 1160
BstMBI	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
BstMWI	GCNNNNNNNGC	5 cut(s)	379, 518, 618, 1223, 1514
BstNI	CCWGG	2 cut(s)	1789, 1807
BstNSI	RCATGY	1 cut(s)	1379
BstPI	GGTNACC	1 cut(s)	404
BstSCI	CCNGG	4 cut(s)	354, 1416, 1787, 1805
BstSFI	CTRYAG	3 cut(s)	592, 1386, 1401
BstSLI	GKGCMC	2 cut(s)	1400, 1670
BstV1I	GCAGC	5 cut(s)	12, 759, 841, 1238, 1279
BstV2I	GAAGAC	3 cut(s)	953, 1210, 1434
BstX2I	RGATCY	3 cut(s)	800, 1000, 1606
BstXI	CCANNNNNNTGG	1 cut(s)	416
BstYI	RGATCY	3 cut(s)	800, 1000, 1606
BsuRI	GGCC	4 cut(s)	170, 1500, 1728, 1787
BtgI	CCRYGG	2 cut(s)	1231, 1854
BtsCI	GGATG	7 cut(s)	157, 282, 918, 962, 1288, 1622, 1683
BtsI	GCAGTG	1 cut(s)	1395
BtsIMutI	CAGTG	8 cut(s)	225, 317, 601, 1011, 1262, 1395, 1398, 1670
BveI	ACCTGC	1 cut(s)	512
CciI	TCATGA	1 cut(s)	1795
Cfr10I	RCCGGY	3 cut(s)	170, 896, 1496
Cfr13I	GGNCC	3 cut(s)	347, 563, 1868
CseI	GACGC	1 cut(s)	1814
Csp6I	GTAC	1 cut(s)	750
CspCI	CAANNNNNGTGG	2 cut(s)	541, 576
CviAII	CATG	6 cut(s)	211, 1250, 1376, 1571, 1796, 1855
CviQI	GTAC	1 cut(s)	750
DdeI	CTNAG	6 cut(s)	228, 360, 455, 535, 557, 995
DpnI	GATC	6 cut(s)	195, 516, 802, 1002, 1362, 1608
DpnII	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
EaeI	YGGCCR	2 cut(s)	168, 1498
Eam1104I	CTCTTC	3 cut(s)	131, 857, 1665
EarI	CTCTTC	3 cut(s)	131, 857, 1665
EciI	GGCGGA	1 cut(s)	1782
Ecl136II	GAGCTC	1 cut(s)	432
Eco130I	CCWWGG	3 cut(s)	922, 1219, 1854
Eco147I	AGGCCT	1 cut(s)	1728
Eco24I	GRGCYC	2 cut(s)	434, 1795
Eco47I	GGWCC	3 cut(s)	347, 563, 1868
Eco53kI	GAGCTC	1 cut(s)	432
Eco57I	CTGAAG	2 cut(s)	1056, 1646
Eco88I	CYCGRG	1 cut(s)	400
Eco91I	GGTNACC	1 cut(s)	404
EcoICRI	GAGCTC	1 cut(s)	432
EcoNI	CCTNNNNNAGG	2 cut(s)	1571, 1781
EcoO109I	RGGNCCY	1 cut(s)	1868
EcoO65I	GGTNACC	1 cut(s)	404
EcoRII	CCWGG	2 cut(s)	1787, 1805
EcoT14I	CCWWGG	3 cut(s)	922, 1219, 1854
EcoT38I	GRGCYC	2 cut(s)	434, 1795
ErhI	CCWWGG	3 cut(s)	922, 1219, 1854
FaeI	CATG	6 cut(s)	214, 1253, 1379, 1574, 1799, 1858
FalI	AAGNNNNNCTT	2 cut(s)	945, 977
FaqI	GGGAC	1 cut(s)	694
FatI	CATG	6 cut(s)	210, 1249, 1375, 1570, 1795, 1854
FauI	CCCGC	1 cut(s)	1386
FblI	GTMKAC	1 cut(s)	1599
Fnu4HI	GCNGC	6 cut(s)	26, 120, 773, 830, 1227, 1293
FokI	GGATG	7 cut(s)	164, 289, 905, 969, 1295, 1629, 1670
FriOI	GRGCYC	2 cut(s)	434, 1795
Fsp4HI	GCNGC	6 cut(s)	26, 120, 773, 830, 1227, 1293
FspBI	CTAG	2 cut(s)	737, 923
GluI	GCNGC	6 cut(s)	26, 120, 773, 830, 1227, 1293
GsuI	CTGGAG	3 cut(s)	438, 1035, 1789
HaeIII	GGCC	4 cut(s)	170, 1500, 1728, 1787
HapII	CCGG	5 cut(s)	171, 356, 897, 1418, 1497
HgaI	GACGC	1 cut(s)	1814
Hin1I	GRCGYC	1 cut(s)	1707
Hin1II	CATG	6 cut(s)	214, 1253, 1379, 1574, 1799, 1858
HincII	GTYRAC	1 cut(s)	106
HindII	GTYRAC	1 cut(s)	106
HindIII	AAGCTT	1 cut(s)	1352
HpaII	CCGG	5 cut(s)	171, 356, 897, 1418, 1497
HphI	GGTGA	5 cut(s)	145, 299, 624, 681, 701
Hpy166II	GTNNAC	5 cut(s)	106, 689, 1235, 1600, 1668
Hpy188I	TCNGA	9 cut(s)	79, 379, 429, 800, 1365, 1447, 1536, 1691, 1705
Hpy8I	GTNNAC	5 cut(s)	106, 689, 1235, 1600, 1668
HpyAV	CCTTC	6 cut(s)	95, 142, 320, 636, 1531, 1718
HpyCH4III	ACNGT	6 cut(s)	14, 321, 596, 1257, 1402, 1440
HpyCH4IV	ACGT	2 cut(s)	1078, 1707
HpyF10VI	GCNNNNNNNGC	5 cut(s)	379, 518, 618, 1223, 1514
HpyF3I	CTNAG	6 cut(s)	228, 360, 455, 535, 557, 995
HpySE526I	ACGT	2 cut(s)	1078, 1707
Hsp92I	GRCGYC	1 cut(s)	1707
Hsp92II	CATG	6 cut(s)	214, 1253, 1379, 1574, 1799, 1858
Kzo9I	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
LguI	GCTCTTC	1 cut(s)	1665
LmnI	GCTCC	1 cut(s)	227
Lsp1109I	GCAGC	5 cut(s)	12, 759, 841, 1238, 1279
LweI	GCATC	4 cut(s)	267, 663, 1504, 1615
MaeI	CTAG	2 cut(s)	737, 923
MaeII	ACGT	2 cut(s)	1078, 1707
MaeIII	GTNAC	8 cut(s)	305, 324, 404, 458, 598, 707, 1378, 1492
MalI	GATC	6 cut(s)	195, 516, 802, 1002, 1362, 1608
MboI	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
MboII	GAAGA	8 cut(s)	37, 148, 874, 953, 1215, 1434, 1652, 1726
MfeI	CAATTG	1 cut(s)	857
MflI	RGATCY	3 cut(s)	800, 1000, 1606
MhlI	GDGCHC	4 cut(s)	434, 1400, 1670, 1795
MluCI	AATT	8 cut(s)	265, 842, 857, 881, 888, 901, 1006, 1269
MlyI	GAGTC	7 cut(s)	313, 442, 632, 951, 1093, 1200, 1841
MmeI	TCCRAC	1 cut(s)	1714
MroXI	GAANNNNTTC	1 cut(s)	866
MseI	TTAA	3 cut(s)	549, 987, 1611
MslI	CAYNNNNRTG	1 cut(s)	1281
MspI	CCGG	5 cut(s)	171, 356, 897, 1418, 1497
MspR9I	CCNGG	4 cut(s)	356, 1418, 1789, 1807
MunI	CAATTG	1 cut(s)	857
Mva1269I	GAATGC	1 cut(s)	1738
MvaI	CCWGG	2 cut(s)	1789, 1807
MwoI	GCNNNNNNNGC	5 cut(s)	379, 518, 618, 1223, 1514
NciI	CCSGG	2 cut(s)	356, 1418
NcoI	CCATGG	1 cut(s)	1854
NdeII	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
NlaIII	CATG	6 cut(s)	214, 1253, 1379, 1574, 1799, 1858
NlaIV	GGNNCC	1 cut(s)	1771
NmeAIII	GCCGAG	2 cut(s)	312, 620
NmuCI	GTSAC	3 cut(s)	305, 707, 1378
NspI	RCATGY	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	1795
PceI	AGGCCT	1 cut(s)	1728
PciI	ACATGT	1 cut(s)	1375
PciSI	GCTCTTC	1 cut(s)	1665
PcsI	WCGNNNNNNNCGW	1 cut(s)	1629
PctI	GAATGC	1 cut(s)	1738
PdmI	GAANNNNTTC	1 cut(s)	866
PfeI	GAWTC	3 cut(s)	1370, 1467, 1546
PfoI	TCCNGGA	1 cut(s)	1805
PkrI	GCNGC	6 cut(s)	27, 121, 774, 831, 1228, 1294
PleI	GAGTC	7 cut(s)	312, 442, 632, 950, 1093, 1200, 1840
PpsI	GAGTC	7 cut(s)	312, 442, 632, 950, 1093, 1200, 1840
PpuMI	RGGWCCY	1 cut(s)	1868
PscI	ACATGT	1 cut(s)	1375
PsiI	TTATAA	1 cut(s)	951
Psp124BI	GAGCTC	1 cut(s)	434
Psp5II	RGGWCCY	1 cut(s)	1868
Psp6I	CCWGG	2 cut(s)	1787, 1805
PspEI	GGTNACC	1 cut(s)	404
PspGI	CCWGG	2 cut(s)	1787, 1805
PspN4I	GGNNCC	1 cut(s)	1771
PspPI	GGNCC	3 cut(s)	347, 563, 1868
PspPPI	RGGWCCY	1 cut(s)	1868
PstI	CTGCAG	1 cut(s)	1390
PsuI	RGATCY	3 cut(s)	800, 1000, 1606
RsaI	GTAC	1 cut(s)	751
RsaNI	GTAC	1 cut(s)	750
RseI	CAYNNNNRTG	1 cut(s)	1281
SacI	GAGCTC	1 cut(s)	434
SapI	GCTCTTC	1 cut(s)	1665
SaqAI	TTAA	3 cut(s)	549, 987, 1611
SatI	GCNGC	6 cut(s)	26, 120, 773, 830, 1227, 1293
Sau3AI	GATC	6 cut(s)	193, 514, 800, 1000, 1360, 1606
Sau96I	GGNCC	3 cut(s)	347, 563, 1868
SchI	GAGTC	7 cut(s)	313, 442, 632, 951, 1093, 1200, 1841
ScrFI	CCNGG	4 cut(s)	356, 1418, 1789, 1807
SduI	GDGCHC	4 cut(s)	434, 1400, 1670, 1795
SfaNI	GCATC	4 cut(s)	267, 663, 1504, 1615
SfcI	CTRYAG	3 cut(s)	592, 1386, 1401
SinI	GGWCC	3 cut(s)	347, 563, 1868
SmiMI	CAYNNNNRTG	1 cut(s)	1281
SmlI	CTYRAG	3 cut(s)	301, 463, 1159
SmoI	CTYRAG	3 cut(s)	301, 463, 1159
Sse9I	AATT	8 cut(s)	265, 842, 857, 881, 888, 901, 1006, 1269
SseBI	AGGCCT	1 cut(s)	1728
SsiI	CCGC	4 cut(s)	119, 1156, 1393, 1767
SspI	AATATT	1 cut(s)	1300
SspMI	CTAG	2 cut(s)	737, 923
SstI	GAGCTC	1 cut(s)	434
StuI	AGGCCT	1 cut(s)	1728
StyD4I	CCNGG	4 cut(s)	354, 1416, 1787, 1805
StyI	CCWWGG	3 cut(s)	922, 1219, 1854
TaaI	ACNGT	6 cut(s)	14, 321, 596, 1257, 1402, 1440
TaiI	ACGT	2 cut(s)	1081, 1710
TaqI	TCGA	4 cut(s)	877, 1623, 1632, 1650
TaqII	GACCGA	1 cut(s)	1617
TasI	AATT	8 cut(s)	265, 842, 857, 881, 888, 901, 1006, 1269
TatI	WGTACW	1 cut(s)	749
TauI	GCSGC	1 cut(s)	122
TfiI	GAWTC	3 cut(s)	1370, 1467, 1546
Tru1I	TTAA	3 cut(s)	549, 987, 1611
Tru9I	TTAA	3 cut(s)	549, 987, 1611
TscAI	CASTG	8 cut(s)	232, 324, 601, 1018, 1262, 1395, 1405, 1670
TseFI	GTSAC	3 cut(s)	305, 707, 1378
TseI	GCWGC	5 cut(s)	25, 772, 829, 1226, 1292
Tsp45I	GTSAC	3 cut(s)	305, 707, 1378
TspDTI	ATGAA	7 cut(s)	161, 519, 618, 855, 1266, 1335, 1831
TspGWI	ACGGA	1 cut(s)	178
TspRI	CASTG	8 cut(s)	232, 324, 601, 1018, 1262, 1395, 1405, 1670
VneI	GTGCAC	1 cut(s)	1666
VpaK11BI	GGWCC	3 cut(s)	347, 563, 1868
XagI	CCTNNNNNAGG	2 cut(s)	1571, 1781
XapI	RAATTY	3 cut(s)	265, 842, 1006
XceI	RCATGY	1 cut(s)	1379
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1191
XmaJI	CCTAGG	1 cut(s)	922
XmiI	GTMKAC	1 cut(s)	1599
XmnI	GAANNNNTTC	1 cut(s)	866
XspI	CTAG	2 cut(s)	737, 923
ZraI	GACGTC	1 cut(s)	1708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.