Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0012808

Physical Location & Seq

Genomic Coordinates Forward (+)

8559918 .. 8565241

Gene Structure 5324 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031828

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGAAAAAGAAACTAAAGCTGCCTCTTGGGTTTTGCTTCTTCTACTTGTGCATCCCATTGGTCACAGCTTCTGACAGTTTGCTCTCCCCCAAAGGTGTCAACTTTGAAGGTCTGGCCCTCCAAGATTTAAAACCTAAATGCATTTCCTTTTTGCTTTTTGAAATTTGTTCTATGATTGATGATGCAATGTGTTGTTTGGTGTTATTTGGTTTGTGTGGTTCAGTGGCTGCATTGATGTCAGTGAAGAAGGAGATGCAGGATGAGTTGCTTGTGATGGGTGGGTGGGATATCAACTCAGTTGATCCTTGCACTTGGAACATGGTGGGTTGTTCTGCTGAGGGATATGTAATCTCCGTTGCAATGGCCAGCTCGGGTTTATCCGGAATGCTTTCGCCAAGTATTGGGAATTTGAGTCATCTTCGGACATTGTTGTTACAAAACAATCAGTTGTCTGGTCCTATCCCAACTGAGATAGGGAGGCTTTCGCTGCTTGAAACTCTGGACCTTTCGGGCAACCAGTTTTCTGGAAACATTCCGAGTTCTTTGGGGTTTCTGACTCATCTAAGTTACTTGAGGCTTAATAGAAATAATTTGAGTGGTCAAATTCCTAGCCTTGTTGCTGATCTCACAGATCTTTCGTTCTTGGATTTATCATTTAATAATCTTAGTGGGCCCGCGCCAAAAATACTGGCGAAAGGTTACAGTGTGACAGGGAACAGCTTTCTTTGCAATCCTTTGTCAGCAGACTCGACACGAATCTGCGTGGATGTGTCAAAACCAGTAAACGACACAGGTTCACCACCGAAAGTCAGTGACCACCATCGATGGGTACTTTCTGTTGCTCTAGGCATTAGTTGTACATTTGTTATTTCAGTGATGCTGCTTGTTTGTTGGGTGCATTGGTACAGATCTCGTCTTCTATTTACATCTTATGTGCAGCAAGATTATGAATTAGATATAAGTCATCTAAAGAGGTTCTCCTATCGTGAATTACAACTTGCAACGAGCAATTTTAGTTCTAAAAACATCCTAGGACAAGGCGGATATGGAGTCGTTTATAAAGGATGTCTTCCTAATAGGACACTGGTGGCAGTTAAGAGACTTAGAGATCCCAATTTCACTGGAGAAGTTCAGTTCCAAACTGAAGTTGAAATGATAGGCTTGGCTTTGCATCGGAACCTTTTACGTTTATTTGGATTTTGTATGACAACAAACGAGAGGTTGCTTGTTTATCCTTATATGCCAAATGGGAGTGTTGCTGACCGGTTAAGAGACACTTGTCGAGATAGGCCATCATTGGATTGGAACAGAAGACTGTGTATCGCCCTTGGGGCTGCCCGTGGACTTGTATACTTGCACGAACAGTGTAATCCAAAAATTATTCACAGGGATGTCAAAGCTGCAAACATTTTGCTTGACGAAAGTTTTGAAGCTGTAGTTGGGGATTTTGGTCTTGCTAAACTGTTAGATCAGAGGGAATCACATGTCACTACCGCAGTGCGGGGCACTGTAGGACACATAGCACCGGAGTATCTCTCCACAGGACAGTCTTCTGAAAAGACAGATGTTTTTGGATTTGGGATACTGCTTTTGGAGCTCATGACAGGGCAAAAGGCGTTAGATGCTGGAAATGGTCAAGTTCAGAAAGGAATGATTCTTGATTGGGTTCGAACCTTACATGAGGAGAAGAGGCTGGAAGTGCTAGTAGACAGGGATCTAAAAGGCTGTTTTGATGCAACCGAGCTTGAAACATGCGCAGAGTTGGCTCTGCAGTGTACTCAGTCAAGCCCCAACCTCCGGCCAAAGATGTCAGATGTCCTAAAGATCTTGGAAGGCCTTATTGAGCAATCAGTACAAACAGAAGATCCACAAGGTGGCACCAACCCTTCTGAGGCCAGGACTTGCAGTTTCTCCAGGGATTACAGCGATGTTCGGCAAGACTCTTCATTCATCATTGAAGCCATTGAGCTTTCCGGACCTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

662

Amino Acids

72.87

Weight (kDa)

5.91

Isoelectric Point (pI)

38.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	75 - 111	6.7e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	133 - 217	1e-12	Leucine-rich repeat region
Pkinase	PF00069	339 - 608	3.6e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	341 - 609	1.5e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45780 AT5G45780
fragaria_vesca	FvH4_3g07470 FvH4_3g07470 FvH4_3g07470
malus_domestica	MD05G1297400.v1.1 MD10G1277100.v1.1
prunus_persica	Prupe.4G064800_v2.0.a1
pyrus_communis	pycom05g27550 pycom10g23140
rosa_chinensis	RchiOBHm_Chr5g0011381
rosa_laevigata	RLG00000031828
rosa_multiflora	Rmu_sc0009975.1_g000012
rosa_roxburghii	Rroxscaffold_1G00065070
rosa_rugosa	Rorug04G0456700
rosa_samantha	Rh5BG083400 Rh5DG083300
rosa_wichuraiana	Rw5G007670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1059
Acc16I	TGCGCA	1 cut(s)	1756
AccB1I	GGYRCC	1 cut(s)	1877
AccB7I	CCANNNNNTGG	2 cut(s)	401, 1874
AccI	GTMKAC	2 cut(s)	1350, 1707
AccII	CGCG	1 cut(s)	677
AccIII	TCCGGA	2 cut(s)	380, 1973
AciI	CCGC	4 cut(s)	675, 1041, 1494, 1501
AclWI	GGATC	4 cut(s)	296, 1103, 1722, 1859
AcoI	YGGCCR	2 cut(s)	363, 1799
AcsI	RAATTY	3 cut(s)	162, 406, 603
AcuI	CTGAAG	1 cut(s)	1164
AdeI	CACNNNGTG	1 cut(s)	1874
AfaI	GTAC	5 cut(s)	831, 859, 905, 1777, 1854
AfiI	CCNNNNNNNGG	7 cut(s)	401, 826, 1500, 1797, 1874, 1891, 1980
AflIII	ACRYGT	1 cut(s)	1483
AgeI	ACCGGT	1 cut(s)	1263
AgsI	TTSAA	7 cut(s)	107, 161, 494, 1151, 1430, 1748, 1958
AjnI	CCWGG	2 cut(s)	1895, 1913
AjuI	GAANNNNNNNTTGG	2 cut(s)	1422, 1454
AluBI	AGCT	9 cut(s)	19, 68, 369, 720, 1400, 1433, 1597, 1744, 1969
AluI	AGCT	9 cut(s)	19, 68, 369, 720, 1400, 1433, 1597, 1744, 1969
Alw21I	GWGCWC	1 cut(s)	1599
Alw26I	GTCTC	2 cut(s)	1093, 1266
AlwI	GGATC	4 cut(s)	296, 1103, 1722, 1859
AlwNI	CAGNNNCTG	2 cut(s)	71, 227
Ama87I	CYCGRG	1 cut(s)	370
Aor13HI	TCCGGA	2 cut(s)	380, 1973
AoxI	GGCC	7 cut(s)	114, 363, 671, 1289, 1799, 1834, 1893
ApaI	GGGCCC	1 cut(s)	675
ApeKI	GCWGC	7 cut(s)	19, 227, 487, 880, 937, 1334, 1400
ApoI	RAATTY	3 cut(s)	162, 406, 603
ArsI	GACNNNNNNTTYG	2 cut(s)	1409, 1441
AsiGI	ACCGGT	1 cut(s)	1263
Asp700I	GAANNNNTTC	1 cut(s)	388
AspA2I	CCTAGG	1 cut(s)	1030
AspLEI	GCGC	2 cut(s)	679, 1757
AspS9I	GGNCC	6 cut(s)	115, 455, 502, 671, 672, 1976
AsuHPI	GGTGA	1 cut(s)	789
AsuII	TTCGAA	1 cut(s)	1669
AvaI	CYCGRG	1 cut(s)	370
AvaII	GGWCC	3 cut(s)	455, 502, 1976
AvrII	CCTAGG	1 cut(s)	1030
BaeGI	GKGCMC	2 cut(s)	675, 1508
BaeI	ACNNNNGTAYC	2 cut(s)	1514, 1547
BalI	TGGCCA	1 cut(s)	365
BanI	GGYRCC	1 cut(s)	1877
BanII	GRGCYC	2 cut(s)	675, 1599
BbsI	GAAGAC	4 cut(s)	908, 1061, 1318, 1542
Bbv12I	GWGCWC	1 cut(s)	1599
BbvCI	CCTCAGC	1 cut(s)	336
BbvI	GCAGC	7 cut(s)	6, 214, 474, 867, 949, 1321, 1387
BccI	CCATC	4 cut(s)	268, 819, 828, 1300
BciT130I	CCWGG	2 cut(s)	1897, 1915
BciVI	GTATCC	1 cut(s)	1575
BcoDI	GTCTC	2 cut(s)	1093, 1266
BfaI	CTAG	4 cut(s)	609, 845, 1031, 1703
BfmI	CTRYAG	3 cut(s)	1434, 1509, 1769
BfuI	GTATCC	1 cut(s)	1575
BglI	GCCNNNNNGGC	1 cut(s)	1331
BglII	AGATCT	3 cut(s)	631, 908, 1824
BisI	GCNGC	7 cut(s)	20, 228, 488, 881, 938, 1335, 1401
BlnI	CCTAGG	1 cut(s)	1030
BlsI	GCNGC	7 cut(s)	21, 229, 489, 882, 939, 1336, 1402
Bme1390I	CCNGG	2 cut(s)	1897, 1915
Bme18I	GGWCC	3 cut(s)	455, 502, 1976
BmeT110I	CYCGRG	1 cut(s)	370
BmgT120I	GGNCC	6 cut(s)	115, 455, 502, 671, 672, 1976
BmiI	GGNNCC	3 cut(s)	673, 1178, 1879
BmrFI	CCNGG	2 cut(s)	1897, 1915
BmsI	GCATC	7 cut(s)	60, 172, 243, 867, 1180, 1612, 1723
BoxI	GACNNNNGTC	1 cut(s)	1278
BpiI	GAAGAC	4 cut(s)	908, 1061, 1318, 1542
BplI	GAGNNNNNCTC	2 cut(s)	1520, 1552
BpmI	CTGGAG	2 cut(s)	1143, 1897
Bpu10I	CCTNAGC	1 cut(s)	336
Bpu14I	TTCGAA	1 cut(s)	1669
BpuEI	CTTGAG	1 cut(s)	592
Bsa29I	ATCGAT	1 cut(s)	823
BsaJI	CCNNGG	5 cut(s)	1030, 1327, 1339, 1914, 1979
BsaWI	WCCGGW	4 cut(s)	380, 1263, 1525, 1973
Bsc4I	CCNNNNNNNGG	7 cut(s)	401, 826, 1500, 1797, 1874, 1891, 1980
Bse118I	RCCGGY	1 cut(s)	1263
Bse1I	ACTGG	5 cut(s)	517, 693, 779, 1089, 1126
Bse3DI	GCAATG	2 cut(s)	192, 366
BseAI	TCCGGA	2 cut(s)	380, 1973
BseBI	CCWGG	2 cut(s)	1897, 1915
BseCI	ATCGAT	1 cut(s)	823
BseDI	CCNNGG	5 cut(s)	1030, 1327, 1339, 1914, 1979
BseGI	GGATG	6 cut(s)	51, 265, 772, 1026, 1070, 1396
BseLI	CCNNNNNNNGG	7 cut(s)	401, 826, 1500, 1797, 1874, 1891, 1980
BseMI	GCAATG	2 cut(s)	192, 366
BseMII	CTCAG	5 cut(s)	309, 327, 459, 1793, 1881
BseNI	ACTGG	5 cut(s)	517, 693, 779, 1089, 1126
BseRI	GAGGAG	1 cut(s)	1697
BseSI	GKGCMC	2 cut(s)	675, 1508
BseXI	GCAGC	7 cut(s)	6, 214, 474, 867, 949, 1321, 1387
BsgI	GTGCAG	1 cut(s)	956
Bsh1236I	CGCG	1 cut(s)	677
BshFI	GGCC	7 cut(s)	116, 365, 673, 1291, 1801, 1836, 1895
BshNI	GGYRCC	1 cut(s)	1877
BshTI	ACCGGT	1 cut(s)	1263
BshVI	ATCGAT	1 cut(s)	823
BsiHKAI	GWGCWC	1 cut(s)	1599
BsiHKCI	CYCGRG	1 cut(s)	370
BsiSI	CCGG	5 cut(s)	381, 1264, 1526, 1798, 1974
BslI	CCNNNNNNNGG	7 cut(s)	401, 826, 1500, 1797, 1874, 1891, 1980
BsmAI	GTCTC	2 cut(s)	1093, 1266
BsmI	GAATGC	1 cut(s)	390
BsnI	GGCC	7 cut(s)	116, 365, 673, 1291, 1801, 1836, 1895
BsoBI	CYCGRG	1 cut(s)	370
Bsp119I	TTCGAA	1 cut(s)	1669
Bsp120I	GGGCCC	1 cut(s)	671
Bsp1286I	GDGCHC	3 cut(s)	675, 1508, 1599
Bsp13I	TCCGGA	2 cut(s)	380, 1973
Bsp1407I	TGTACA	1 cut(s)	857
Bsp143I	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
BspACI	CCGC	4 cut(s)	675, 1041, 1494, 1501
BspANI	GGCC	7 cut(s)	116, 365, 673, 1291, 1801, 1836, 1895
BspCNI	CTCAG	5 cut(s)	308, 328, 460, 1792, 1882
BspDI	ATCGAT	1 cut(s)	823
BspEI	TCCGGA	2 cut(s)	380, 1973
BspFNI	CGCG	1 cut(s)	677
BspHI	TCATGA	1 cut(s)	1599
BspLI	GGNNCC	3 cut(s)	673, 1178, 1879
BspMAI	CTGCAG	1 cut(s)	1773
BspPI	GGATC	4 cut(s)	296, 1103, 1722, 1859
BspT104I	TTCGAA	1 cut(s)	1669
BspT107I	GGYRCC	1 cut(s)	1877
BsrDI	GCAATG	2 cut(s)	192, 366
BsrFI	RCCGGY	1 cut(s)	1263
BsrGI	TGTACA	1 cut(s)	857
BsrI	ACTGG	5 cut(s)	517, 693, 779, 1089, 1126
BssAI	RCCGGY	1 cut(s)	1263
BssECI	CCNNGG	5 cut(s)	1030, 1327, 1339, 1914, 1979
BssMI	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
BssNAI	GTATAC	1 cut(s)	1351
BssT1I	CCWWGG	2 cut(s)	1030, 1327
Bst1107I	GTATAC	1 cut(s)	1351
Bst2UI	CCWGG	2 cut(s)	1897, 1915
Bst4CI	ACNGT	7 cut(s)	77, 704, 1317, 1365, 1464, 1510, 1548
Bst6I	CTCTTC	2 cut(s)	1682, 1948
BstAUI	TGTACA	1 cut(s)	857
BstBI	TTCGAA	1 cut(s)	1669
BstC8I	GCNNGC	2 cut(s)	367, 675
BstDEI	CTNAG	8 cut(s)	295, 336, 468, 563, 665, 1103, 1779, 1890
BstDSI	CCRYGG	1 cut(s)	1339
BstF5I	GGATG	6 cut(s)	51, 265, 772, 1026, 1070, 1396
BstFNI	CGCG	1 cut(s)	677
BstHHI	GCGC	2 cut(s)	679, 1757
BstKTI	GATC	9 cut(s)	304, 625, 634, 911, 1111, 1471, 1717, 1827, 1867
BstMAI	GTCTC	2 cut(s)	1093, 1266
BstMBI	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
BstMWI	GCNNNNNNNGC	7 cut(s)	487, 726, 1331, 1594, 1622, 1699, 1763
BstNI	CCWGG	2 cut(s)	1897, 1915
BstNSI	RCATGY	2 cut(s)	1487, 1755
BstPAI	GACNNNNGTC	1 cut(s)	1278
BstSCI	CCNGG	2 cut(s)	1895, 1913
BstSFI	CTRYAG	3 cut(s)	1434, 1509, 1769
BstSLI	GKGCMC	2 cut(s)	675, 1508
BstUI	CGCG	1 cut(s)	677
BstV1I	GCAGC	7 cut(s)	6, 214, 474, 867, 949, 1321, 1387
BstV2I	GAAGAC	4 cut(s)	908, 1061, 1318, 1542
BstX2I	RGATCY	6 cut(s)	631, 908, 1108, 1714, 1824, 1864
BstXI	CCANNNNNNTGG	1 cut(s)	524
BstYI	RGATCY	6 cut(s)	631, 908, 1108, 1714, 1824, 1864
BstZ17I	GTATAC	1 cut(s)	1351
Bsu15I	ATCGAT	1 cut(s)	823
BsuI	GTATCC	1 cut(s)	1575
BsuRI	GGCC	7 cut(s)	116, 365, 673, 1291, 1801, 1836, 1895
BsuTUI	ATCGAT	1 cut(s)	823
BtgI	CCRYGG	1 cut(s)	1339
BtgZI	GCGATG	1 cut(s)	1941
BtsCI	GGATG	6 cut(s)	51, 265, 772, 1026, 1070, 1396
BtsI	GCAGTG	2 cut(s)	1503, 1778
Cac8I	GCNNGC	2 cut(s)	367, 675
CaiI	CAGNNNCTG	2 cut(s)	71, 227
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	2 cut(s)	679, 1757
Cfr10I	RCCGGY	1 cut(s)	1263
Cfr13I	GGNCC	6 cut(s)	115, 455, 502, 671, 672, 1976
ClaI	ATCGAT	1 cut(s)	823
Csp6I	GTAC	5 cut(s)	830, 858, 904, 1776, 1853
CspAI	ACCGGT	1 cut(s)	1263
CviAII	CATG	5 cut(s)	319, 1484, 1600, 1679, 1752
CviQI	GTAC	5 cut(s)	830, 858, 904, 1776, 1853
DdeI	CTNAG	8 cut(s)	295, 336, 468, 563, 665, 1103, 1779, 1890
DpnI	GATC	9 cut(s)	303, 624, 633, 910, 1110, 1470, 1716, 1826, 1866
DpnII	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
DraI	TTTAAA	1 cut(s)	129
DraIII	CACNNNGTG	1 cut(s)	1874
EaeI	YGGCCR	2 cut(s)	363, 1799
Eam1104I	CTCTTC	2 cut(s)	1682, 1948
EarI	CTCTTC	2 cut(s)	1682, 1948
EciI	GGCGGA	1 cut(s)	1056
Ecl136II	GAGCTC	1 cut(s)	1597
Eco130I	CCWWGG	2 cut(s)	1030, 1327
Eco147I	AGGCCT	1 cut(s)	1836
Eco24I	GRGCYC	2 cut(s)	675, 1599
Eco32I	GATATC	1 cut(s)	289
Eco47I	GGWCC	3 cut(s)	455, 502, 1976
Eco53kI	GAGCTC	1 cut(s)	1597
Eco57I	CTGAAG	1 cut(s)	1164
Eco88I	CYCGRG	1 cut(s)	370
EcoICRI	GAGCTC	1 cut(s)	1597
EcoRII	CCWGG	2 cut(s)	1895, 1913
EcoRV	GATATC	1 cut(s)	289
EcoT14I	CCWWGG	2 cut(s)	1030, 1327
EcoT22I	ATGCAT	1 cut(s)	143
EcoT38I	GRGCYC	2 cut(s)	675, 1599
ErhI	CCWWGG	2 cut(s)	1030, 1327
FaeI	CATG	5 cut(s)	322, 1487, 1603, 1682, 1755
FalI	AAGNNNNNCTT	4 cut(s)	1053, 1085, 1261, 1293
FatI	CATG	5 cut(s)	318, 1483, 1599, 1678, 1751
FauI	CCCGC	2 cut(s)	682, 1494
FblI	GTMKAC	2 cut(s)	1350, 1707
Fnu4HI	GCNGC	7 cut(s)	20, 228, 488, 881, 938, 1335, 1401
FokI	GGATG	6 cut(s)	38, 272, 779, 1013, 1077, 1403
FriOI	GRGCYC	2 cut(s)	675, 1599
Fsp4HI	GCNGC	7 cut(s)	20, 228, 488, 881, 938, 1335, 1401
FspBI	CTAG	4 cut(s)	609, 845, 1031, 1703
FspI	TGCGCA	1 cut(s)	1756
GlaI	GCGC	2 cut(s)	678, 1756
GluI	GCNGC	7 cut(s)	20, 228, 488, 881, 938, 1335, 1401
GsuI	CTGGAG	2 cut(s)	1143, 1897
HaeIII	GGCC	7 cut(s)	116, 365, 673, 1291, 1801, 1836, 1895
HapII	CCGG	5 cut(s)	381, 1264, 1526, 1798, 1974
HhaI	GCGC	2 cut(s)	679, 1757
Hin1II	CATG	5 cut(s)	322, 1487, 1603, 1682, 1755
Hin6I	GCGC	2 cut(s)	677, 1755
HinP1I	GCGC	2 cut(s)	677, 1755
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HinfI	GANTC	8 cut(s)	412, 556, 746, 756, 1050, 1478, 1654, 1940
HpaII	CCGG	5 cut(s)	381, 1264, 1526, 1798, 1974
HphI	GGTGA	1 cut(s)	789
Hpy166II	GTNNAC	7 cut(s)	100, 784, 797, 1343, 1351, 1708, 1776
Hpy188III	TCNNGA	8 cut(s)	381, 500, 525, 986, 1283, 1600, 1658, 1974
Hpy8I	GTNNAC	7 cut(s)	100, 784, 797, 1343, 1351, 1708, 1776
HpyAV	CCTTC	4 cut(s)	101, 241, 1826, 1896
HpyCH4III	ACNGT	7 cut(s)	77, 704, 1317, 1365, 1464, 1510, 1548
HpyCH4IV	ACGT	1 cut(s)	1186
HpyF10VI	GCNNNNNNNGC	7 cut(s)	487, 726, 1331, 1594, 1622, 1699, 1763
HpyF3I	CTNAG	8 cut(s)	295, 336, 468, 563, 665, 1103, 1779, 1890
HpySE526I	ACGT	1 cut(s)	1186
Hsp92II	CATG	5 cut(s)	322, 1487, 1603, 1682, 1755
HspAI	GCGC	2 cut(s)	677, 1755
Kpn2I	TCCGGA	2 cut(s)	380, 1973
Kzo9I	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
LmnI	GCTCC	1 cut(s)	1594
Lsp1109I	GCAGC	7 cut(s)	6, 214, 474, 867, 949, 1321, 1387
LweI	GCATC	7 cut(s)	60, 172, 243, 867, 1180, 1612, 1723
MaeI	CTAG	4 cut(s)	609, 845, 1031, 1703
MaeII	ACGT	1 cut(s)	1186
MaeIII	GTNAC	7 cut(s)	61, 432, 566, 698, 706, 812, 1486
MalI	GATC	9 cut(s)	303, 624, 633, 910, 1110, 1470, 1716, 1826, 1866
MboI	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
MflI	RGATCY	6 cut(s)	631, 908, 1108, 1714, 1824, 1864
MhlI	GDGCHC	3 cut(s)	675, 1508, 1599
MlsI	TGGCCA	1 cut(s)	365
MluCI	AATT	9 cut(s)	162, 406, 589, 603, 950, 989, 1009, 1114, 1377
MluNI	TGGCCA	1 cut(s)	365
MlyI	GAGTC	5 cut(s)	421, 550, 740, 1059, 1934
Mox20I	TGGCCA	1 cut(s)	365
Mph1103I	ATGCAT	1 cut(s)	143
MroI	TCCGGA	2 cut(s)	380, 1973
MroXI	GAANNNNTTC	1 cut(s)	388
MscI	TGGCCA	1 cut(s)	365
MseI	TTAA	5 cut(s)	128, 579, 657, 1095, 1268
MslI	CAYNNNNRTG	1 cut(s)	1389
Msp20I	TGGCCA	1 cut(s)	365
MspI	CCGG	5 cut(s)	381, 1264, 1526, 1798, 1974
MspR9I	CCNGG	2 cut(s)	1897, 1915
Mva1269I	GAATGC	1 cut(s)	390
MvaI	CCWGG	2 cut(s)	1897, 1915
MvnI	CGCG	1 cut(s)	677
MwoI	GCNNNNNNNGC	7 cut(s)	487, 726, 1331, 1594, 1622, 1699, 1763
NdeII	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
NlaIII	CATG	5 cut(s)	322, 1487, 1603, 1682, 1755
NlaIV	GGNNCC	3 cut(s)	673, 1178, 1879
NmuCI	GTSAC	4 cut(s)	61, 706, 812, 1486
NsbI	TGCGCA	1 cut(s)	1756
NsiI	ATGCAT	1 cut(s)	143
NspI	RCATGY	2 cut(s)	1487, 1755
NspV	TTCGAA	1 cut(s)	1669
PagI	TCATGA	1 cut(s)	1599
PceI	AGGCCT	1 cut(s)	1836
PciI	ACATGT	1 cut(s)	1483
PctI	GAATGC	1 cut(s)	390
PdmI	GAANNNNTTC	1 cut(s)	388
PfeI	GAWTC	3 cut(s)	756, 1478, 1654
PflMI	CCANNNNNTGG	2 cut(s)	401, 1874
PinAI	ACCGGT	1 cut(s)	1263
PkrI	GCNGC	7 cut(s)	21, 229, 489, 882, 939, 1336, 1402
PleI	GAGTC	5 cut(s)	420, 550, 740, 1058, 1934
PpsI	GAGTC	5 cut(s)	420, 550, 740, 1058, 1934
PscI	ACATGT	1 cut(s)	1483
PshAI	GACNNNNGTC	1 cut(s)	1278
PsiI	TTATAA	1 cut(s)	1059
Psp124BI	GAGCTC	1 cut(s)	1599
Psp6I	CCWGG	2 cut(s)	1895, 1913
PspGI	CCWGG	2 cut(s)	1895, 1913
PspN4I	GGNNCC	3 cut(s)	673, 1178, 1879
PspOMI	GGGCCC	1 cut(s)	671
PspPI	GGNCC	6 cut(s)	115, 455, 502, 671, 672, 1976
PstI	CTGCAG	1 cut(s)	1773
PstNI	CAGNNNCTG	2 cut(s)	71, 227
PsuI	RGATCY	6 cut(s)	631, 908, 1108, 1714, 1824, 1864
RsaI	GTAC	5 cut(s)	831, 859, 905, 1777, 1854
RsaNI	GTAC	5 cut(s)	830, 858, 904, 1776, 1853
RseI	CAYNNNNRTG	1 cut(s)	1389
SacI	GAGCTC	1 cut(s)	1599
SaqAI	TTAA	5 cut(s)	128, 579, 657, 1095, 1268
SatI	GCNGC	7 cut(s)	20, 228, 488, 881, 938, 1335, 1401
Sau3AI	GATC	9 cut(s)	301, 622, 631, 908, 1108, 1468, 1714, 1824, 1864
Sau96I	GGNCC	6 cut(s)	115, 455, 502, 671, 672, 1976
SchI	GAGTC	5 cut(s)	421, 550, 740, 1059, 1934
ScrFI	CCNGG	2 cut(s)	1897, 1915
SduI	GDGCHC	3 cut(s)	675, 1508, 1599
SfaNI	GCATC	7 cut(s)	60, 172, 243, 867, 1180, 1612, 1723
SfcI	CTRYAG	3 cut(s)	1434, 1509, 1769
SfuI	TTCGAA	1 cut(s)	1669
SinI	GGWCC	3 cut(s)	455, 502, 1976
SmiMI	CAYNNNNRTG	1 cut(s)	1389
SmlI	CTYRAG	1 cut(s)	571
SmoI	CTYRAG	1 cut(s)	571
Sse9I	AATT	9 cut(s)	162, 406, 589, 603, 950, 989, 1009, 1114, 1377
SseBI	AGGCCT	1 cut(s)	1836
SsiI	CCGC	4 cut(s)	675, 1041, 1494, 1501
SspMI	CTAG	4 cut(s)	609, 845, 1031, 1703
SstI	GAGCTC	1 cut(s)	1599
StuI	AGGCCT	1 cut(s)	1836
StyD4I	CCNGG	2 cut(s)	1895, 1913
StyI	CCWWGG	2 cut(s)	1030, 1327
TaaI	ACNGT	7 cut(s)	77, 704, 1317, 1365, 1464, 1510, 1548
TaiI	ACGT	1 cut(s)	1189
TaqI	TCGA	4 cut(s)	749, 823, 1282, 1669
TasI	AATT	9 cut(s)	162, 406, 589, 603, 950, 989, 1009, 1114, 1377
TatI	WGTACW	3 cut(s)	857, 1775, 1852
TfiI	GAWTC	3 cut(s)	756, 1478, 1654
Tru1I	TTAA	5 cut(s)	128, 579, 657, 1095, 1268
Tru9I	TTAA	5 cut(s)	128, 579, 657, 1095, 1268
TseFI	GTSAC	4 cut(s)	61, 706, 812, 1486
TseI	GCWGC	7 cut(s)	19, 227, 487, 880, 937, 1334, 1400
Tsp45I	GTSAC	4 cut(s)	61, 706, 812, 1486
TspDTI	ATGAA	4 cut(s)	17, 963, 1935, 1939
TspGWI	ACGGA	1 cut(s)	343
Van91I	CCANNNNNTGG	2 cut(s)	401, 1874
VpaK11BI	GGWCC	3 cut(s)	455, 502, 1976
XapI	RAATTY	3 cut(s)	162, 406, 603
XceI	RCATGY	2 cut(s)	1487, 1755
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1299
XmaJI	CCTAGG	1 cut(s)	1030
XmiI	GTMKAC	2 cut(s)	1350, 1707
XmnI	GAANNNNTTC	1 cut(s)	388
XspI	CTAG	4 cut(s)	609, 845, 1031, 1703
Zsp2I	ATGCAT	1 cut(s)	143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.