Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012808

Physical Location & Seq

Genomic Coordinates Forward (+)

7542433 .. 7547255

Gene Structure 4823 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29207

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAAAAAGAAACTAGAGCTGCCTCTTGGGTTTTGCTTCTTCTACTTGTGCATCCCATTGGTCACAGCTTCTGACAGTTTGCTCTCCCCCAAAGGTGTCAACTTTGAAGTGGCTGCATTGATGTCAGTGAAGAAGGAGATGCAGGATGAGTTGCTTGTGATGGGTGGGTGGGATATCAACTCAGTTGATCCTTGCACTTGGAACATGGTGGGTTGTTCTGCTGAGGGATATGTAATCTCCGTTGCAATGGCCAGCTCGGGTTTATCCGGAATGCTTTCGCCAAGTATTGGGAATTTGAGTCATCTTCGGACATTGTTGTTACAAAACAATCAGTTGTCTGGTCCTATCCCAACTGAGATAGGGAGGCTTTCGCTGCTTGAAACTCTGGACCTTTCGGGTAACCAGTTTTCTGGAAACATTCCGAGTTCTTTGGGGTTTCTGACTCATCTAAGTTACTTGAGGCTTAATAGAAATAATTTGAGCGGTCAAATTCCTAGCCTTGTTGCTGATCTCACAGATCTTTCATTCTTGGATTTATCATTTAATAATCTTAGTGGGCCCACGCCAAAAATACTGGCGAAAGGCTACAGTGTGACAGGGAACAGCTTTCTTTGCAATCCTTTGTCAGCAGACTCAACACGAATCTGCGTGGATGTGTCAAAACCAGTAAACGACACAGGTTCACCACCGAAAGTCAGTGACCACCATCGATGGGTACTTTCTGTTGCTCTAGGCATTAGTTGTACATTTGTTATTTCAGTGATGCTGCTTGTTTGTTGGGTGCATTGGTACAGATCTCGTCTTCTATTTACATCTTATGTGCAGCAAGATTATGAATTAGATATAAGTCATCTAAAGAGGTTCTCCTATCGTGAATTACAACTTGCAACGAGCAGTTTTAGTTCTAAAAACATCCTAGGACAAGGTGGATATGGAGTCGTTTATAAAGGATGTCTTCCTAATAGGACACTGGTGGCAGTTAAGAGACTTAGAGATCCCAATTTCACTGGAGAAGTTCAGTTCCAAACTGAAGTTGAAATGATAGGCTTGGCTTTGCATCGGAACCTTTTACGTTTATTTGGATTTTGTATGACAACAAACGAGAGGTTGCTTGTTTATCCTTATATGCCAAATGGGAGTGTTGCTGACCGGTTAAGAGACACTTGTCGAGATAGACCATCATTGGATTGGAACAGAAGACTGTGTATCGCCCTTGGGGCTGCCCGTGGACTTGTATACTTGCACGAACAGTGTAATCCAAAAATTATTCACAGGGATGTCAAAGCTGCAAACATTTTGCTTGACGAAAGTTTTGAAGCTGTAGTTGGGGATTTTGGTCTTGCTAAACTGTTAGATCAGAGGGAATCACACATCACTACCGCAGTGCGGGGCACTGTAGGACACATAGCACCGGAGTATCTCTCCACAGGACAGTCTTCTGAAAAGACAGATGTTTTTGGATTTGGGATACTGCTTTTGGAGCTCATAACAGGGCAAAAGGCATTAGATGCTGGAAATGGTCAAGTTCAGAAGGGAATGATTCTTGATTGGGTTCGAACCTTACATGAGGAGAAGAGGCTGGAAGTGCTAGTAGACAGGGATCTAAAAGGATGTTTTGATGCAACTGAGCTTGAAACATGCGCAGAGTTGGCTCTGCAGTGTACTCAGTCAAGCCCCAACCTCCGGCCAAAGATGTCAGATGTCCTAAAGATCTTGGAAGGCCTTGTTGGGCAATCAGTACAAACAGAAGATCCACAAGGTGGCACCAACCCTTCTGAGGCCAGGACTTACAGTTTCTCCAGGGATTACAGCGATGTTCGGCAAGACTCTTCATTCATCATCGAAGCCATTGAGCTTTCTGGACCTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

623

Amino Acids

68.75

Weight (kDa)

6.0

Isoelectric Point (pI)

39.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	34 - 73	8.6e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	95 - 180	8.6e-13	Leucine-rich repeat region
Pkinase	PF00069	301 - 570	5.5e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	303 - 571	5.4e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45780 AT5G45780
fragaria_vesca	FvH4_3g07470 FvH4_3g07470 FvH4_3g07470
malus_domestica	MD05G1297400.v1.1 MD10G1277100.v1.1
prunus_persica	Prupe.4G064800_v2.0.a1
pyrus_communis	pycom05g27550 pycom10g23140
rosa_chinensis	RchiOBHm_Chr5g0011381
rosa_laevigata	RLG00000031828
rosa_multiflora	Rmu_sc0009975.1_g000012
rosa_roxburghii	Rroxscaffold_1G00065070
rosa_rugosa	Rorug04G0456700
rosa_samantha	Rh5BG083400 Rh5DG083300
rosa_wichuraiana	Rw5G007670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	945
Acc16I	TGCGCA	1 cut(s)	1642
AccB1I	GGYRCC	1 cut(s)	1763
AccB7I	CCANNNNNTGG	2 cut(s)	287, 1760
AccBSI	CCGCTC	1 cut(s)	483
AccI	GTMKAC	2 cut(s)	1236, 1593
AccIII	TCCGGA	1 cut(s)	266
AciI	CCGC	3 cut(s)	483, 1380, 1387
AclWI	GGATC	4 cut(s)	182, 989, 1608, 1745
AcoI	YGGCCR	2 cut(s)	249, 1685
AcsI	RAATTY	2 cut(s)	292, 489
AcuI	CTGAAG	1 cut(s)	1050
AdeI	CACNNNGTG	1 cut(s)	1760
AfaI	GTAC	5 cut(s)	717, 745, 791, 1663, 1740
AfiI	CCNNNNNNNGG	6 cut(s)	287, 712, 1386, 1683, 1760, 1777
AgeI	ACCGGT	1 cut(s)	1149
AgsI	TTSAA	5 cut(s)	107, 380, 1037, 1316, 1634
AjnI	CCWGG	2 cut(s)	1781, 1799
AjuI	GAANNNNNNNTTGG	4 cut(s)	1308, 1340, 1710, 1742
AluBI	AGCT	9 cut(s)	19, 68, 255, 606, 1286, 1319, 1483, 1630, 1855
AluI	AGCT	9 cut(s)	19, 68, 255, 606, 1286, 1319, 1483, 1630, 1855
Alw21I	GWGCWC	1 cut(s)	1485
Alw26I	GTCTC	2 cut(s)	979, 1152
AlwI	GGATC	4 cut(s)	182, 989, 1608, 1745
AlwNI	CAGNNNCTG	1 cut(s)	71
Ama87I	CYCGRG	1 cut(s)	256
Aor13HI	TCCGGA	1 cut(s)	266
AoxI	GGCC	5 cut(s)	249, 557, 1685, 1720, 1779
ApaI	GGGCCC	1 cut(s)	561
ApeKI	GCWGC	7 cut(s)	19, 113, 373, 766, 823, 1220, 1286
ApoI	RAATTY	2 cut(s)	292, 489
ArsI	GACNNNNNNTTYG	2 cut(s)	1295, 1327
AsiGI	ACCGGT	1 cut(s)	1149
Asp700I	GAANNNNTTC	1 cut(s)	274
AspA2I	CCTAGG	1 cut(s)	916
AspLEI	GCGC	1 cut(s)	1643
AspS9I	GGNCC	5 cut(s)	341, 388, 557, 558, 1862
AsuHPI	GGTGA	1 cut(s)	675
AsuII	TTCGAA	1 cut(s)	1555
AvaI	CYCGRG	1 cut(s)	256
AvaII	GGWCC	3 cut(s)	341, 388, 1862
AvrII	CCTAGG	1 cut(s)	916
BaeGI	GKGCMC	2 cut(s)	561, 1394
BaeI	ACNNNNGTAYC	2 cut(s)	1400, 1433
BalI	TGGCCA	1 cut(s)	251
BanI	GGYRCC	1 cut(s)	1763
BanII	GRGCYC	2 cut(s)	561, 1485
BbsI	GAAGAC	4 cut(s)	794, 947, 1204, 1428
Bbv12I	GWGCWC	1 cut(s)	1485
BbvCI	CCTCAGC	1 cut(s)	222
BbvI	GCAGC	7 cut(s)	6, 100, 360, 753, 835, 1207, 1273
BccI	CCATC	4 cut(s)	154, 705, 714, 1186
BciT130I	CCWGG	2 cut(s)	1783, 1801
BciVI	GTATCC	1 cut(s)	1461
BcoDI	GTCTC	2 cut(s)	979, 1152
BfaI	CTAG	5 cut(s)	14, 495, 731, 917, 1589
BfmI	CTRYAG	4 cut(s)	586, 1320, 1395, 1655
BfuI	GTATCC	1 cut(s)	1461
BglI	GCCNNNNNGGC	1 cut(s)	1217
BglII	AGATCT	3 cut(s)	517, 794, 1710
BisI	GCNGC	7 cut(s)	20, 114, 374, 767, 824, 1221, 1287
BlnI	CCTAGG	1 cut(s)	916
BlsI	GCNGC	7 cut(s)	21, 115, 375, 768, 825, 1222, 1288
Bme1390I	CCNGG	2 cut(s)	1783, 1801
Bme18I	GGWCC	3 cut(s)	341, 388, 1862
BmeT110I	CYCGRG	1 cut(s)	256
BmgT120I	GGNCC	5 cut(s)	341, 388, 557, 558, 1862
BmiI	GGNNCC	3 cut(s)	559, 1064, 1765
BmrFI	CCNGG	2 cut(s)	1783, 1801
BmsI	GCATC	6 cut(s)	60, 129, 753, 1066, 1498, 1609
BoxI	GACNNNNGTC	1 cut(s)	1164
BpiI	GAAGAC	4 cut(s)	794, 947, 1204, 1428
BplI	GAGNNNNNCTC	2 cut(s)	1406, 1438
BpmI	CTGGAG	2 cut(s)	1029, 1783
Bpu10I	CCTNAGC	1 cut(s)	222
Bpu14I	TTCGAA	1 cut(s)	1555
BpuEI	CTTGAG	1 cut(s)	478
Bsa29I	ATCGAT	1 cut(s)	709
BsaJI	CCNNGG	5 cut(s)	916, 1213, 1225, 1800, 1865
BsaWI	WCCGGW	3 cut(s)	266, 1149, 1411
BsaXI	ACNNNNNCTCC	2 cut(s)	1781, 1811
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 712, 1386, 1683, 1760, 1777
Bse118I	RCCGGY	1 cut(s)	1149
Bse1I	ACTGG	5 cut(s)	403, 579, 665, 975, 1012
Bse3DI	GCAATG	1 cut(s)	252
BseAI	TCCGGA	1 cut(s)	266
BseBI	CCWGG	2 cut(s)	1783, 1801
BseCI	ATCGAT	1 cut(s)	709
BseDI	CCNNGG	5 cut(s)	916, 1213, 1225, 1800, 1865
BseGI	GGATG	7 cut(s)	51, 151, 658, 912, 956, 1282, 1616
BseLI	CCNNNNNNNGG	6 cut(s)	287, 712, 1386, 1683, 1760, 1777
BseMI	GCAATG	1 cut(s)	252
BseMII	CTCAG	6 cut(s)	195, 213, 345, 1617, 1679, 1767
BseNI	ACTGG	5 cut(s)	403, 579, 665, 975, 1012
BseRI	GAGGAG	1 cut(s)	1583
BseSI	GKGCMC	2 cut(s)	561, 1394
BseXI	GCAGC	7 cut(s)	6, 100, 360, 753, 835, 1207, 1273
BsgI	GTGCAG	1 cut(s)	842
BshFI	GGCC	5 cut(s)	251, 559, 1687, 1722, 1781
BshNI	GGYRCC	1 cut(s)	1763
BshTI	ACCGGT	1 cut(s)	1149
BshVI	ATCGAT	1 cut(s)	709
BsiHKAI	GWGCWC	1 cut(s)	1485
BsiHKCI	CYCGRG	1 cut(s)	256
BsiSI	CCGG	4 cut(s)	267, 1150, 1412, 1684
BslI	CCNNNNNNNGG	6 cut(s)	287, 712, 1386, 1683, 1760, 1777
BsmAI	GTCTC	2 cut(s)	979, 1152
BsmI	GAATGC	1 cut(s)	276
BsnI	GGCC	5 cut(s)	251, 559, 1687, 1722, 1781
BsoBI	CYCGRG	1 cut(s)	256
Bsp119I	TTCGAA	1 cut(s)	1555
Bsp120I	GGGCCC	1 cut(s)	557
Bsp1286I	GDGCHC	3 cut(s)	561, 1394, 1485
Bsp13I	TCCGGA	1 cut(s)	266
Bsp1407I	TGTACA	1 cut(s)	743
Bsp143I	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
BspACI	CCGC	3 cut(s)	483, 1380, 1387
BspANI	GGCC	5 cut(s)	251, 559, 1687, 1722, 1781
BspCNI	CTCAG	6 cut(s)	194, 214, 346, 1618, 1678, 1768
BspDI	ATCGAT	1 cut(s)	709
BspEI	TCCGGA	1 cut(s)	266
BspLI	GGNNCC	3 cut(s)	559, 1064, 1765
BspMAI	CTGCAG	1 cut(s)	1659
BspPI	GGATC	4 cut(s)	182, 989, 1608, 1745
BspT104I	TTCGAA	1 cut(s)	1555
BspT107I	GGYRCC	1 cut(s)	1763
BsrBI	CCGCTC	1 cut(s)	483
BsrDI	GCAATG	1 cut(s)	252
BsrFI	RCCGGY	1 cut(s)	1149
BsrGI	TGTACA	1 cut(s)	743
BsrI	ACTGG	5 cut(s)	403, 579, 665, 975, 1012
BssAI	RCCGGY	1 cut(s)	1149
BssECI	CCNNGG	5 cut(s)	916, 1213, 1225, 1800, 1865
BssMI	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
BssNAI	GTATAC	1 cut(s)	1237
BssT1I	CCWWGG	2 cut(s)	916, 1213
Bst1107I	GTATAC	1 cut(s)	1237
Bst2UI	CCWGG	2 cut(s)	1783, 1801
Bst4CI	ACNGT	8 cut(s)	77, 590, 1203, 1251, 1350, 1396, 1434, 1793
Bst6I	CTCTTC	2 cut(s)	1568, 1834
BstAPI	GCANNNNNTGC	1 cut(s)	1508
BstAUI	TGTACA	1 cut(s)	743
BstBI	TTCGAA	1 cut(s)	1555
BstC8I	GCNNGC	1 cut(s)	253
BstDEI	CTNAG	9 cut(s)	181, 222, 354, 449, 551, 989, 1626, 1665, 1776
BstDSI	CCRYGG	1 cut(s)	1225
BstEII	GGTNACC	1 cut(s)	398
BstF5I	GGATG	7 cut(s)	51, 151, 658, 912, 956, 1282, 1616
BstHHI	GCGC	1 cut(s)	1643
BstKTI	GATC	9 cut(s)	190, 511, 520, 797, 997, 1357, 1603, 1713, 1753
BstMAI	GTCTC	2 cut(s)	979, 1152
BstMBI	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
BstMWI	GCNNNNNNNGC	7 cut(s)	373, 612, 1217, 1480, 1508, 1585, 1649
BstNI	CCWGG	2 cut(s)	1783, 1801
BstNSI	RCATGY	1 cut(s)	1641
BstPAI	GACNNNNGTC	1 cut(s)	1164
BstPI	GGTNACC	1 cut(s)	398
BstSCI	CCNGG	2 cut(s)	1781, 1799
BstSFI	CTRYAG	4 cut(s)	586, 1320, 1395, 1655
BstSLI	GKGCMC	2 cut(s)	561, 1394
BstV1I	GCAGC	7 cut(s)	6, 100, 360, 753, 835, 1207, 1273
BstV2I	GAAGAC	4 cut(s)	794, 947, 1204, 1428
BstX2I	RGATCY	6 cut(s)	517, 794, 994, 1600, 1710, 1750
BstXI	CCANNNNNNTGG	1 cut(s)	410
BstYI	RGATCY	6 cut(s)	517, 794, 994, 1600, 1710, 1750
BstZ17I	GTATAC	1 cut(s)	1237
Bsu15I	ATCGAT	1 cut(s)	709
BsuI	GTATCC	1 cut(s)	1461
BsuRI	GGCC	5 cut(s)	251, 559, 1687, 1722, 1781
BsuTUI	ATCGAT	1 cut(s)	709
BtgI	CCRYGG	1 cut(s)	1225
BtgZI	GCGATG	1 cut(s)	1827
BtsCI	GGATG	7 cut(s)	51, 151, 658, 912, 956, 1282, 1616
BtsI	GCAGTG	2 cut(s)	1389, 1664
Cac8I	GCNNGC	1 cut(s)	253
CaiI	CAGNNNCTG	1 cut(s)	71
CfoI	GCGC	1 cut(s)	1643
Cfr10I	RCCGGY	1 cut(s)	1149
Cfr13I	GGNCC	5 cut(s)	341, 388, 557, 558, 1862
ClaI	ATCGAT	1 cut(s)	709
Csp6I	GTAC	5 cut(s)	716, 744, 790, 1662, 1739
CspAI	ACCGGT	1 cut(s)	1149
CviAII	CATG	3 cut(s)	205, 1565, 1638
CviQI	GTAC	5 cut(s)	716, 744, 790, 1662, 1739
DdeI	CTNAG	9 cut(s)	181, 222, 354, 449, 551, 989, 1626, 1665, 1776
DpnI	GATC	9 cut(s)	189, 510, 519, 796, 996, 1356, 1602, 1712, 1752
DpnII	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
DraIII	CACNNNGTG	1 cut(s)	1760
EaeI	YGGCCR	2 cut(s)	249, 1685
Eam1104I	CTCTTC	2 cut(s)	1568, 1834
EarI	CTCTTC	2 cut(s)	1568, 1834
Ecl136II	GAGCTC	1 cut(s)	1483
Eco130I	CCWWGG	2 cut(s)	916, 1213
Eco147I	AGGCCT	1 cut(s)	1722
Eco24I	GRGCYC	2 cut(s)	561, 1485
Eco32I	GATATC	1 cut(s)	175
Eco47I	GGWCC	3 cut(s)	341, 388, 1862
Eco53kI	GAGCTC	1 cut(s)	1483
Eco57I	CTGAAG	1 cut(s)	1050
Eco88I	CYCGRG	1 cut(s)	256
Eco91I	GGTNACC	1 cut(s)	398
EcoICRI	GAGCTC	1 cut(s)	1483
EcoO65I	GGTNACC	1 cut(s)	398
EcoRII	CCWGG	2 cut(s)	1781, 1799
EcoRV	GATATC	1 cut(s)	175
EcoT14I	CCWWGG	2 cut(s)	916, 1213
EcoT38I	GRGCYC	2 cut(s)	561, 1485
ErhI	CCWWGG	2 cut(s)	916, 1213
FaeI	CATG	3 cut(s)	208, 1568, 1641
FalI	AAGNNNNNCTT	4 cut(s)	939, 971, 1147, 1179
FatI	CATG	3 cut(s)	204, 1564, 1637
FauI	CCCGC	1 cut(s)	1380
FblI	GTMKAC	2 cut(s)	1236, 1593
Fnu4HI	GCNGC	7 cut(s)	20, 114, 374, 767, 824, 1221, 1287
FokI	GGATG	7 cut(s)	38, 158, 665, 899, 963, 1289, 1623
FriOI	GRGCYC	2 cut(s)	561, 1485
Fsp4HI	GCNGC	7 cut(s)	20, 114, 374, 767, 824, 1221, 1287
FspBI	CTAG	5 cut(s)	14, 495, 731, 917, 1589
FspI	TGCGCA	1 cut(s)	1642
GlaI	GCGC	1 cut(s)	1642
GluI	GCNGC	7 cut(s)	20, 114, 374, 767, 824, 1221, 1287
GsuI	CTGGAG	2 cut(s)	1029, 1783
HaeIII	GGCC	5 cut(s)	251, 559, 1687, 1722, 1781
HapII	CCGG	4 cut(s)	267, 1150, 1412, 1684
HhaI	GCGC	1 cut(s)	1643
Hin1II	CATG	3 cut(s)	208, 1568, 1641
Hin6I	GCGC	1 cut(s)	1641
HinP1I	GCGC	1 cut(s)	1641
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HinfI	GANTC	8 cut(s)	298, 442, 632, 642, 936, 1364, 1540, 1826
HpaII	CCGG	4 cut(s)	267, 1150, 1412, 1684
HphI	GGTGA	1 cut(s)	675
Hpy166II	GTNNAC	7 cut(s)	100, 670, 683, 1229, 1237, 1594, 1662
Hpy188III	TCNNGA	7 cut(s)	267, 386, 411, 872, 1169, 1544, 1860
Hpy8I	GTNNAC	7 cut(s)	100, 670, 683, 1229, 1237, 1594, 1662
HpyAV	CCTTC	4 cut(s)	127, 1525, 1712, 1782
HpyCH4III	ACNGT	8 cut(s)	77, 590, 1203, 1251, 1350, 1396, 1434, 1793
HpyCH4IV	ACGT	1 cut(s)	1072
HpyF10VI	GCNNNNNNNGC	7 cut(s)	373, 612, 1217, 1480, 1508, 1585, 1649
HpyF3I	CTNAG	9 cut(s)	181, 222, 354, 449, 551, 989, 1626, 1665, 1776
HpySE526I	ACGT	1 cut(s)	1072
Hsp92II	CATG	3 cut(s)	208, 1568, 1641
HspAI	GCGC	1 cut(s)	1641
Kpn2I	TCCGGA	1 cut(s)	266
Kzo9I	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
LmnI	GCTCC	1 cut(s)	1480
Lsp1109I	GCAGC	7 cut(s)	6, 100, 360, 753, 835, 1207, 1273
LweI	GCATC	6 cut(s)	60, 129, 753, 1066, 1498, 1609
MaeI	CTAG	5 cut(s)	14, 495, 731, 917, 1589
MaeII	ACGT	1 cut(s)	1072
MaeIII	GTNAC	6 cut(s)	61, 318, 398, 452, 592, 698
MalI	GATC	9 cut(s)	189, 510, 519, 796, 996, 1356, 1602, 1712, 1752
MbiI	CCGCTC	1 cut(s)	483
MboI	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
MflI	RGATCY	6 cut(s)	517, 794, 994, 1600, 1710, 1750
MhlI	GDGCHC	3 cut(s)	561, 1394, 1485
MlsI	TGGCCA	1 cut(s)	251
MluCI	AATT	7 cut(s)	292, 475, 489, 836, 875, 1000, 1263
MluNI	TGGCCA	1 cut(s)	251
MlyI	GAGTC	5 cut(s)	307, 436, 626, 945, 1820
Mox20I	TGGCCA	1 cut(s)	251
MroI	TCCGGA	1 cut(s)	266
MroXI	GAANNNNTTC	1 cut(s)	274
MscI	TGGCCA	1 cut(s)	251
MseI	TTAA	4 cut(s)	465, 543, 981, 1154
MslI	CAYNNNNRTG	1 cut(s)	1275
Msp20I	TGGCCA	1 cut(s)	251
MspI	CCGG	4 cut(s)	267, 1150, 1412, 1684
MspR9I	CCNGG	2 cut(s)	1783, 1801
Mva1269I	GAATGC	1 cut(s)	276
MvaI	CCWGG	2 cut(s)	1783, 1801
MwoI	GCNNNNNNNGC	7 cut(s)	373, 612, 1217, 1480, 1508, 1585, 1649
NdeII	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
NlaIII	CATG	3 cut(s)	208, 1568, 1641
NlaIV	GGNNCC	3 cut(s)	559, 1064, 1765
NmuCI	GTSAC	3 cut(s)	61, 592, 698
NsbI	TGCGCA	1 cut(s)	1642
NspI	RCATGY	1 cut(s)	1641
NspV	TTCGAA	1 cut(s)	1555
PceI	AGGCCT	1 cut(s)	1722
PctI	GAATGC	1 cut(s)	276
PdmI	GAANNNNTTC	1 cut(s)	274
PfeI	GAWTC	3 cut(s)	642, 1364, 1540
PflMI	CCANNNNNTGG	2 cut(s)	287, 1760
PinAI	ACCGGT	1 cut(s)	1149
PkrI	GCNGC	7 cut(s)	21, 115, 375, 768, 825, 1222, 1288
PleI	GAGTC	5 cut(s)	306, 436, 626, 944, 1820
PpsI	GAGTC	5 cut(s)	306, 436, 626, 944, 1820
PshAI	GACNNNNGTC	1 cut(s)	1164
PsiI	TTATAA	1 cut(s)	945
Psp124BI	GAGCTC	1 cut(s)	1485
Psp6I	CCWGG	2 cut(s)	1781, 1799
PspEI	GGTNACC	1 cut(s)	398
PspGI	CCWGG	2 cut(s)	1781, 1799
PspN4I	GGNNCC	3 cut(s)	559, 1064, 1765
PspOMI	GGGCCC	1 cut(s)	557
PspPI	GGNCC	5 cut(s)	341, 388, 557, 558, 1862
PstI	CTGCAG	1 cut(s)	1659
PstNI	CAGNNNCTG	1 cut(s)	71
PsuI	RGATCY	6 cut(s)	517, 794, 994, 1600, 1710, 1750
RsaI	GTAC	5 cut(s)	717, 745, 791, 1663, 1740
RsaNI	GTAC	5 cut(s)	716, 744, 790, 1662, 1739
RseI	CAYNNNNRTG	1 cut(s)	1275
SacI	GAGCTC	1 cut(s)	1485
SaqAI	TTAA	4 cut(s)	465, 543, 981, 1154
SatI	GCNGC	7 cut(s)	20, 114, 374, 767, 824, 1221, 1287
Sau3AI	GATC	9 cut(s)	187, 508, 517, 794, 994, 1354, 1600, 1710, 1750
Sau96I	GGNCC	5 cut(s)	341, 388, 557, 558, 1862
SchI	GAGTC	5 cut(s)	307, 436, 626, 945, 1820
ScrFI	CCNGG	2 cut(s)	1783, 1801
SduI	GDGCHC	3 cut(s)	561, 1394, 1485
SfaNI	GCATC	6 cut(s)	60, 129, 753, 1066, 1498, 1609
SfcI	CTRYAG	4 cut(s)	586, 1320, 1395, 1655
SfuI	TTCGAA	1 cut(s)	1555
SinI	GGWCC	3 cut(s)	341, 388, 1862
SmiMI	CAYNNNNRTG	1 cut(s)	1275
SmlI	CTYRAG	1 cut(s)	457
SmoI	CTYRAG	1 cut(s)	457
Sse9I	AATT	7 cut(s)	292, 475, 489, 836, 875, 1000, 1263
SseBI	AGGCCT	1 cut(s)	1722
SsiI	CCGC	3 cut(s)	483, 1380, 1387
SspMI	CTAG	5 cut(s)	14, 495, 731, 917, 1589
SstI	GAGCTC	1 cut(s)	1485
StuI	AGGCCT	1 cut(s)	1722
StyD4I	CCNGG	2 cut(s)	1781, 1799
StyI	CCWWGG	2 cut(s)	916, 1213
TaaI	ACNGT	8 cut(s)	77, 590, 1203, 1251, 1350, 1396, 1434, 1793
TaiI	ACGT	1 cut(s)	1075
TaqI	TCGA	4 cut(s)	709, 1168, 1555, 1842
TasI	AATT	7 cut(s)	292, 475, 489, 836, 875, 1000, 1263
TatI	WGTACW	3 cut(s)	743, 1661, 1738
TfiI	GAWTC	3 cut(s)	642, 1364, 1540
Tru1I	TTAA	4 cut(s)	465, 543, 981, 1154
Tru9I	TTAA	4 cut(s)	465, 543, 981, 1154
TseFI	GTSAC	3 cut(s)	61, 592, 698
TseI	GCWGC	7 cut(s)	19, 113, 373, 766, 823, 1220, 1286
Tsp45I	GTSAC	3 cut(s)	61, 592, 698
TspDTI	ATGAA	5 cut(s)	17, 513, 849, 1821, 1825
TspGWI	ACGGA	1 cut(s)	229
Van91I	CCANNNNNTGG	2 cut(s)	287, 1760
VpaK11BI	GGWCC	3 cut(s)	341, 388, 1862
XapI	RAATTY	2 cut(s)	292, 489
XceI	RCATGY	1 cut(s)	1641
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1185
XmaJI	CCTAGG	1 cut(s)	916
XmiI	GTMKAC	2 cut(s)	1236, 1593
XmnI	GAANNNNTTC	1 cut(s)	274
XspI	CTAG	5 cut(s)	14, 495, 731, 917, 1589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.