Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0003300

Physical Location & Seq

Genomic Coordinates Reverse (-)

46838721 .. 46844130

Gene Structure 5410 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1351400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGCTACGCTTGGAGATTTAGGGGTTGCAGCAGGCATCAATATTCTCAGCGCGCTCATTTTCTTTATAGTGTTTGCCTTTCTTAGGCTTCAACCCTTCAACGACAGGGTCTACTTTCCAAAATGGTATTTGAAGGGACTAAGGGAGAGTCCCACTCATTCTGGCGCGTTTGTGCGCAAGTTTGTCAATCTGGACTTCAGGTCATACTTGAGGTTTCTGAATTGGATGCCCGCTGCGCTGAGGATGCCAGAACCAGAGCTTATTGATCATGCAGGATTGGATTCTGCAGTTTACTTGCGGATTTACTTGATAGGGCTTAAAATCTTTGTTCCTATAGTATTCCTTGCATGGGCCGTTTTGGTACCAGTCAACTATACGAATAGCACTTTGGATATGGAAAAGTCAAAAAATGTTACTTCAAGTGACATTGATAAGTTCTCGATATCAAACGTCCCAGAAAAATCGCAAAGATTCTGGAGTCATATAGTGATGGCTTATGTCTTTTCCATTTGGACATGCTATGTGCTGCTGAAGGAGTATGAAAAAGTTGCCAATATGAGGCTGCATTTTCTTGCAACAGAAAAACGCCGACCAGATCAGTTTACGGTCCTTGTCCGGAATGTTCCACCAGATGCAGACGAATCTACAAGTGAGCTTGTGGAGCACTTTTTTCTGGTCAATCATCCAGATCACTATCTTACACATCAGGTGGTATATAATGCCAACTCACTTGCGAATTTGCTGAAGAAGAAGAAGAAGATGTCGAACTGGCTTGTCTACTTTCGAAATAAACTTTCTAGAAGTGAAACTGCAACAAGGCCCTTAACGAAGACTGGTTCTCTTGGGCTTTGGGGAAAAAAGGTTGACGCAATTGAGTATTATGAAACTGAGATTGACAAATTGACAAATCAAATAGTTGAAGAAAAAGAGAGGGTCACTCATGATCCGAAGTCTATCATGCCAGCCGCCTTTGTTTCCTTTAAAACTCGATGGGGTGCCGCTGTTTGTGCACAAACTCAGCAATCCAGAAACCCAACTATTTGGTTAACAGAGTGGGCTCCTGAGCCACGTGATGTGTATTGGCCAAACCTGCCAGTTCCATATGTACAACTCACAGTCAAGAGGCTTATTATGGGCGTTGCATTCTTTTTTCTCACCTTCTTTTTCATGATTCCCATTGCAATTGTACAATCTTTTGCAAGCCTCGATGGACTCGAGAAAGTAGCTCCATTCCTAAAGCCCATTGTAGAAGTGAAATTCATTAAGTCAGTCATTGCAGGTTTTCTACCCGGAATTGCACTGAAGATATTTCTAATTTTTCTACCAACCATATTGATGATCATGGCAAAATTTGAGGGCTATATATCTCTGTCTTCTCTTGAACGGAGAGCAGCATCTAGATACTATCTCTTCTCTCTGGTGAATGTATTCCTTGGGAGCATTATTACTGGAACTGCGTTTGAACAGCTAGATTCTTTCACTCACCAATCAGCATCTGACATTCCAAAAACAATTGGTGTTGCTATCCCAATGAAAGCAACTTTCTTTATCTCGTATATAATGGTTGATGGATGGGCCGGTATAGCTGCAGAGATTTTGATGTTGAAACCGCTGATAATATACCACTTGAAGAATTTCTTCCTGGTGAAGACTGACAAGGATAGGGAGGAGGCCATGGATCCAGGGAGTATTGGTTTCAATACTGGAGAGCCTCAAATTCAGTTATATATCTTGCTCGGCCTTGTGTATGCTACGGTGACACCAACCTTACTTCCGTTCATAATCATTTTCTTTGGCCTGGCTTATGTTGTTTTCCGTCATCAGATCATAAATGTCTATAACCAGGAGTACGAGAGCGCTGCAGCATTCTGGCCTGATGTCCATGGTCGTATTATCACTGCATTGATTATCTCACAACTCCTCTTGTTTGGGCTGTTGAGTACAAAAGAAGCTGCTTCATCAACGCCGTTTCTCATTGCACTTCCAGTACTGACCTTATCGTTCCATAGGTATTGCAAAGGTCGTTTCGAACCTGCATTCACGACATACCCATTACAGGAAGCAATGATGAAAGATACACTGGAACGTGCAAGAGAACCGAACTTGAATTTAAAAGGCTATCTTCAGAGTGCATATATTCATCCGGTTTTCCACGAGTGTGACGAGGAGGAAGACCATGAATCGTTTGAAAAGGAAGAATCTGAGAGCGTGATTGTACCTACAAAACGGCAATCCCGGAGGAACACCCCAGTGCCTAGCAGAATGACGGGTGGATCCTCGCCGTCTTTGCTTGATGTTGAAGAACTTGCACAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005227 GO:0005261 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008324 GO:0009628 GO:0009987 GO:0010959 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0016043 GO:0022607 GO:0022803 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0032879 GO:0033554 GO:0034220 GO:0043269 GO:0043933 GO:0044085 GO:0044464 GO:0050789 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051259 GO:0051262 GO:0051716 GO:0051924 GO:0055085 GO:0065003 GO:0065007 GO:0071214 GO:0071470 GO:0071474 GO:0071840 GO:0071944 GO:0090279 GO:0098655 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

773

Amino Acids

88.09

Weight (kDa)

8.31

Isoelectric Point (pI)

42.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	7 - 179	1.7e-44	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	200 - 363	8.2e-46	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	374 - 646	1.7e-81	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11960 AT1G11960 AT1G62320 AT1G62320 AT1G62320 AT1G62320 AT1G62320 AT4G04340 AT4G04340 AT4G04340 AT4G22120 AT4G22120 AT4G22120 AT4G22120 AT4G22120 AT4G22120
fragaria_vesca	FvH4_3g01530 FvH4_3g01530 FvH4_3g01530 FvH4_3g01530
malus_domestica	MD05G1351400.v1.1 MD10G1325800.v1.1
prunus_persica	Prupe.4G016200_v2.0.a1
pyrus_communis	pycom05g31850 pycom10g27550
rosa_chinensis	RchiOBHm_Chr5g0002361
rosa_laevigata	RLG00000031022 RLG00000036351
rosa_multiflora	Rmu_sc0006137.1_g000006
rosa_roxburghii	Rroxscaffold_1G00073510
rosa_rugosa	Rorug04G0395400 Rorug04G0395500
rosa_samantha	Rh5AG018300 Rh5BG021000 Rh5CG020200
rosa_wichuraiana	Rw5G001720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	176
Acc36I	ACCTGC	3 cut(s)	1098, 1268, 2041
Acc65I	GGTACC	1 cut(s)	361
AccB1I	GGYRCC	2 cut(s)	361, 995
AccI	GTMKAC	2 cut(s)	111, 777
AccII	CGCG	2 cut(s)	53, 167
AccIII	TCCGGA	1 cut(s)	615
AciI	CCGC	5 cut(s)	231, 298, 966, 999, 1610
AclWI	GGATC	5 cut(s)	938, 1673, 1686, 2268, 2281
AcoI	YGGCCR	1 cut(s)	1082
AcsI	RAATTY	6 cut(s)	736, 1256, 1349, 1633, 1716, 2107
AcuI	CTGAAG	5 cut(s)	181, 551, 764, 1322, 2108
AcvI	CACGTG	1 cut(s)	1070
AfaI	GTAC	7 cut(s)	363, 1107, 1188, 1850, 1942, 1989, 2217
AfeI	AGCGCT	1 cut(s)	1858
AfiI	CCNNNNNNNGG	4 cut(s)	84, 349, 558, 2056
AhdI	GACNNNNNGTC	1 cut(s)	199
AjnI	CCWGG	4 cut(s)	1641, 1681, 1797, 1842
AjuI	GAANNNNNNNTTGG	2 cut(s)	371, 403
AleI	CACNNNNGTG	2 cut(s)	2157, 2249
AluBI	AGCT	6 cut(s)	259, 655, 1226, 1468, 1586, 1952
AluI	AGCT	6 cut(s)	259, 655, 1226, 1468, 1586, 1952
Alw21I	GWGCWC	2 cut(s)	666, 1012
Alw44I	GTGCAC	1 cut(s)	1008
AlwI	GGATC	5 cut(s)	938, 1673, 1686, 2268, 2281
AlwNI	CAGNNNCTG	1 cut(s)	1496
Ama87I	CYCGRG	1 cut(s)	1214
Aor13HI	TCCGGA	1 cut(s)	615
Aor51HI	AGCGCT	1 cut(s)	1858
AoxI	GGCC	8 cut(s)	351, 818, 1082, 1575, 1671, 1738, 1795, 1871
ApaLI	GTGCAC	1 cut(s)	1008
ApeKI	GCWGC	9 cut(s)	29, 233, 526, 562, 1391, 1586, 1859, 1862, 1952
ApoI	RAATTY	6 cut(s)	736, 1256, 1349, 1633, 1716, 2107
Asp700I	GAANNNNTTC	3 cut(s)	1427, 1634, 1637
Asp718I	GGTACC	1 cut(s)	361
AspLEI	GCGC	6 cut(s)	53, 55, 167, 177, 238, 1859
AspS9I	GGNCC	4 cut(s)	351, 607, 819, 1575
AsuC2I	CCSGG	2 cut(s)	1290, 2236
AsuHPI	GGTGA	5 cut(s)	1147, 1432, 1475, 1657, 1768
AsuII	TTCGAA	2 cut(s)	784, 2028
AvaI	CYCGRG	1 cut(s)	1214
AvaII	GGWCC	1 cut(s)	607
BaeGI	GKGCMC	1 cut(s)	1012
BalI	TGGCCA	1 cut(s)	1084
BamHI	GGATCC	2 cut(s)	1678, 2273
BanI	GGYRCC	2 cut(s)	361, 995
BanII	GRGCYC	1 cut(s)	1060
BauI	CACGAG	1 cut(s)	2153
BbrPI	CACGTG	1 cut(s)	1070
BbsI	GAAGAC	4 cut(s)	836, 1365, 1655, 2178
Bbv12I	GWGCWC	2 cut(s)	666, 1012
BbvCI	CCTCAGC	1 cut(s)	239
BbvI	GCAGC	9 cut(s)	41, 220, 513, 549, 1403, 1573, 1846, 1874, 1939
BccI	CCATC	5 cut(s)	484, 984, 1202, 1562, 1566
BceAI	ACGGC	4 cut(s)	338, 1951, 2243, 2266
BcgI	CGANNNNNNTGC	2 cut(s)	1841, 1875
BciT130I	CCWGG	4 cut(s)	1643, 1683, 1799, 1844
BclI	TGATCA	2 cut(s)	265, 1338
BcnI	CCSGG	2 cut(s)	1290, 2236
BfaI	CTAG	4 cut(s)	798, 1398, 1469, 2256
BfmI	CTRYAG	4 cut(s)	285, 333, 1587, 1860
BfoI	RGCGCY	1 cut(s)	1860
BfuAI	ACCTGC	3 cut(s)	1098, 1268, 2041
BmcAI	AGTACT	1 cut(s)	1989
Bme1390I	CCNGG	6 cut(s)	1290, 1643, 1683, 1799, 1844, 2236
Bme18I	GGWCC	1 cut(s)	607
BmeRI	GACNNNNNGTC	1 cut(s)	199
BmeT110I	CYCGRG	1 cut(s)	1214
BmgT120I	GGNCC	4 cut(s)	351, 607, 819, 1575
BmiI	GGNNCC	5 cut(s)	363, 997, 1059, 1680, 2275
BmrFI	CCNGG	6 cut(s)	1290, 1643, 1683, 1799, 1844, 2236
BmrI	ACTGGG	1 cut(s)	2243
BmsI	GCATC	6 cut(s)	45, 216, 234, 622, 1403, 1502
BmuI	ACTGGG	1 cut(s)	2243
BpiI	GAAGAC	4 cut(s)	836, 1365, 1655, 2178
BplI	GAGNNNNNCTC	4 cut(s)	139, 171, 922, 954
BpmI	CTGGAG	2 cut(s)	496, 1725
Bpu10I	CCTNAGC	2 cut(s)	239, 1062
Bpu14I	TTCGAA	2 cut(s)	784, 2028
BpuEI	CTTGAG	1 cut(s)	229
BpuMI	CCSGG	2 cut(s)	1290, 2236
BsaAI	YACGTR	1 cut(s)	1070
BsaBI	GATNNNNATC	1 cut(s)	693
BsaJI	CCNNGG	4 cut(s)	1432, 1674, 1682, 1882
BsaWI	WCCGGW	2 cut(s)	615, 2143
BsaXI	ACNNNNNCTCC	2 cut(s)	1678, 1708
Bsc4I	CCNNNNNNNGG	4 cut(s)	84, 349, 558, 2056
Bse118I	RCCGGY	1 cut(s)	1577
Bse1I	ACTGG	9 cut(s)	365, 773, 838, 1094, 1453, 1708, 1985, 2085, 2249
Bse3DI	GCAATG	4 cut(s)	1176, 1272, 1974, 2070
Bse8I	GATNNNNATC	1 cut(s)	693
BseAI	TCCGGA	1 cut(s)	615
BseBI	CCWGG	4 cut(s)	1643, 1683, 1799, 1844
BseDI	CCNNGG	4 cut(s)	1432, 1674, 1682, 1882
BseGI	GGATG	5 cut(s)	231, 249, 682, 1577, 2140
BseJI	GATNNNNATC	1 cut(s)	693
BseLI	CCNNNNNNNGG	4 cut(s)	84, 349, 558, 2056
BseMI	GCAATG	4 cut(s)	1176, 1272, 1974, 2070
BseMII	CTCAG	6 cut(s)	61, 230, 879, 1031, 1053, 2193
BseNI	ACTGG	9 cut(s)	365, 773, 838, 1094, 1453, 1708, 1985, 2085, 2249
BsePI	GCGCGC	1 cut(s)	51
BseRI	GAGGAG	3 cut(s)	1682, 1910, 2180
BseSI	GKGCMC	1 cut(s)	1012
BseXI	GCAGC	9 cut(s)	41, 220, 513, 549, 1403, 1573, 1846, 1874, 1939
Bsh1236I	CGCG	2 cut(s)	53, 167
BshFI	GGCC	8 cut(s)	353, 820, 1084, 1577, 1673, 1740, 1797, 1873
BshNI	GGYRCC	2 cut(s)	361, 995
BsiHKAI	GWGCWC	2 cut(s)	666, 1012
BsiHKCI	CYCGRG	1 cut(s)	1214
BsiSI	CCGG	5 cut(s)	616, 1290, 1578, 2144, 2236
BslFI	GGGAC	3 cut(s)	135, 150, 437
BslI	CCNNNNNNNGG	4 cut(s)	84, 349, 558, 2056
BsmFI	GGGAC	3 cut(s)	135, 150, 437
BsmI	GAATGC	3 cut(s)	1142, 1865, 2036
BsnI	GGCC	8 cut(s)	353, 820, 1084, 1577, 1673, 1740, 1797, 1873
BsoBI	CYCGRG	1 cut(s)	1214
Bsp119I	TTCGAA	2 cut(s)	784, 2028
Bsp1286I	GDGCHC	3 cut(s)	666, 1012, 1060
Bsp13I	TCCGGA	1 cut(s)	615
Bsp1407I	TGTACA	2 cut(s)	1105, 1186
Bsp143I	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
Bsp19I	CCATGG	2 cut(s)	1674, 1882
BspACI	CCGC	5 cut(s)	231, 298, 966, 999, 1610
BspANI	GGCC	8 cut(s)	353, 820, 1084, 1577, 1673, 1740, 1797, 1873
BspCNI	CTCAG	6 cut(s)	60, 231, 880, 1030, 1054, 2194
BspEI	TCCGGA	1 cut(s)	615
BspFNI	CGCG	2 cut(s)	53, 167
BspHI	TCATGA	2 cut(s)	940, 1167
BspLI	GGNNCC	5 cut(s)	363, 997, 1059, 1680, 2275
BspMAI	CTGCAG	3 cut(s)	289, 1591, 1864
BspMI	ACCTGC	3 cut(s)	1098, 1268, 2041
BspPI	GGATC	5 cut(s)	938, 1673, 1686, 2268, 2281
BspT104I	TTCGAA	2 cut(s)	784, 2028
BspT107I	GGYRCC	2 cut(s)	361, 995
BsrDI	GCAATG	4 cut(s)	1176, 1272, 1974, 2070
BsrFI	RCCGGY	1 cut(s)	1577
BsrGI	TGTACA	2 cut(s)	1105, 1186
BsrI	ACTGG	9 cut(s)	365, 773, 838, 1094, 1453, 1708, 1985, 2085, 2249
BssAI	RCCGGY	1 cut(s)	1577
BssECI	CCNNGG	4 cut(s)	1432, 1674, 1682, 1882
BssHII	GCGCGC	1 cut(s)	51
BssMI	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
BssSI	CACGAG	1 cut(s)	2153
BssT1I	CCWWGG	3 cut(s)	1432, 1674, 1882
Bst2BI	CACGAG	1 cut(s)	2153
Bst2UI	CCWGG	4 cut(s)	1643, 1683, 1799, 1844
Bst4CI	ACNGT	3 cut(s)	607, 1117, 1756
Bst6I	CTCTTC	1 cut(s)	1415
BstAUI	TGTACA	2 cut(s)	1105, 1186
BstBAI	YACGTR	1 cut(s)	1070
BstBI	TTCGAA	2 cut(s)	784, 2028
BstC8I	GCNNGC	5 cut(s)	34, 53, 231, 963, 1201
BstDEI	CTNAG	8 cut(s)	47, 83, 140, 239, 888, 1017, 1062, 2202
BstDSI	CCRYGG	2 cut(s)	1674, 1882
BstENI	CCTNNNNNAGG	1 cut(s)	82
BstF5I	GGATG	5 cut(s)	231, 249, 682, 1577, 2140
BstFNI	CGCG	2 cut(s)	53, 167
BstH2I	RGCGCY	1 cut(s)	1860
BstHHI	GCGC	6 cut(s)	53, 55, 167, 177, 238, 1859
BstKTI	GATC	8 cut(s)	268, 598, 691, 946, 1341, 1681, 1827, 2276
BstMBI	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
BstMWI	GCNNNNNNNGC	7 cut(s)	235, 244, 661, 1007, 1090, 1583, 2287
BstNI	CCWGG	4 cut(s)	1643, 1683, 1799, 1844
BstNSI	RCATGY	1 cut(s)	519
BstSCI	CCNGG	6 cut(s)	1288, 1641, 1681, 1797, 1842, 2234
BstSFI	CTRYAG	4 cut(s)	285, 333, 1587, 1860
BstSLI	GKGCMC	1 cut(s)	1012
BstUI	CGCG	2 cut(s)	53, 167
BstV1I	GCAGC	9 cut(s)	41, 220, 513, 549, 1403, 1573, 1846, 1874, 1939
BstV2I	GAAGAC	4 cut(s)	836, 1365, 1655, 2178
BstX2I	RGATCY	2 cut(s)	1678, 2273
BstXI	CCANNNNNNTGG	1 cut(s)	1041
BstYI	RGATCY	2 cut(s)	1678, 2273
BsuRI	GGCC	8 cut(s)	353, 820, 1084, 1577, 1673, 1740, 1797, 1873
BtgI	CCRYGG	2 cut(s)	1674, 1882
BtsCI	GGATG	5 cut(s)	231, 249, 682, 1577, 2140
BtsI	GCAGTG	1 cut(s)	1896
BtsIMutI	CAGTG	4 cut(s)	1298, 1896, 2078, 2256
BveI	ACCTGC	3 cut(s)	1098, 1268, 2041
Cac8I	GCNNGC	5 cut(s)	34, 53, 231, 963, 1201
CaiI	CAGNNNCTG	1 cut(s)	1496
CciI	TCATGA	2 cut(s)	940, 1167
CfoI	GCGC	6 cut(s)	53, 55, 167, 177, 238, 1859
Cfr10I	RCCGGY	1 cut(s)	1577
Cfr13I	GGNCC	4 cut(s)	351, 607, 819, 1575
CseI	GACGC	1 cut(s)	875
Csp6I	GTAC	7 cut(s)	362, 1106, 1187, 1849, 1941, 1988, 2216
CviQI	GTAC	7 cut(s)	362, 1106, 1187, 1849, 1941, 1988, 2216
DdeI	CTNAG	8 cut(s)	47, 83, 140, 239, 888, 1017, 1062, 2202
DpnI	GATC	8 cut(s)	267, 597, 690, 945, 1340, 1680, 1826, 2275
DpnII	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
DraI	TTTAAA	2 cut(s)	982, 2112
DriI	GACNNNNNGTC	1 cut(s)	199
EaeI	YGGCCR	1 cut(s)	1082
Eam1104I	CTCTTC	1 cut(s)	1415
Eam1105I	GACNNNNNGTC	1 cut(s)	199
EarI	CTCTTC	1 cut(s)	1415
Eco130I	CCWWGG	3 cut(s)	1432, 1674, 1882
Eco24I	GRGCYC	1 cut(s)	1060
Eco32I	GATATC	1 cut(s)	444
Eco47I	GGWCC	1 cut(s)	607
Eco47III	AGCGCT	1 cut(s)	1858
Eco57I	CTGAAG	5 cut(s)	181, 551, 764, 1322, 2108
Eco72I	CACGTG	1 cut(s)	1070
Eco88I	CYCGRG	1 cut(s)	1214
EcoNI	CCTNNNNNAGG	1 cut(s)	82
EcoO109I	RGGNCCY	1 cut(s)	819
EcoRII	CCWGG	4 cut(s)	1641, 1681, 1797, 1842
EcoRV	GATATC	1 cut(s)	444
EcoT14I	CCWWGG	3 cut(s)	1432, 1674, 1882
EcoT38I	GRGCYC	1 cut(s)	1060
ErhI	CCWWGG	3 cut(s)	1432, 1674, 1882
FalI	AAGNNNNNCTT	4 cut(s)	1622, 1654, 2106, 2138
FaqI	GGGAC	3 cut(s)	135, 150, 437
FauI	CCCGC	1 cut(s)	238
FauNDI	CATATG	1 cut(s)	1102
FbaI	TGATCA	2 cut(s)	265, 1338
FblI	GTMKAC	2 cut(s)	111, 777
FokI	GGATG	5 cut(s)	238, 256, 669, 1584, 2127
FriOI	GRGCYC	1 cut(s)	1060
FspBI	CTAG	4 cut(s)	798, 1398, 1469, 2256
FspI	TGCGCA	1 cut(s)	176
GlaI	GCGC	6 cut(s)	52, 54, 166, 176, 237, 1858
GsuI	CTGGAG	2 cut(s)	496, 1725
HaeII	RGCGCY	1 cut(s)	1860
HaeIII	GGCC	8 cut(s)	353, 820, 1084, 1577, 1673, 1740, 1797, 1873
HapII	CCGG	5 cut(s)	616, 1290, 1578, 2144, 2236
HgaI	GACGC	1 cut(s)	875
HhaI	GCGC	6 cut(s)	53, 55, 167, 177, 238, 1859
Hin6I	GCGC	6 cut(s)	51, 53, 165, 175, 236, 1857
HinP1I	GCGC	6 cut(s)	51, 53, 165, 175, 236, 1857
HincII	GTYRAC	3 cut(s)	370, 865, 1047
HindII	GTYRAC	3 cut(s)	370, 865, 1047
HpaI	GTTAAC	1 cut(s)	1047
HpaII	CCGG	5 cut(s)	616, 1290, 1578, 2144, 2236
HphI	GGTGA	5 cut(s)	1147, 1432, 1475, 1657, 1768
Hpy166II	GTNNAC	8 cut(s)	112, 292, 370, 603, 778, 865, 1010, 1047
Hpy188I	TCNGA	6 cut(s)	219, 948, 1498, 1824, 2127, 2203
Hpy8I	GTNNAC	8 cut(s)	112, 292, 370, 603, 778, 865, 1010, 1047
HpyAV	CCTTC	4 cut(s)	106, 127, 526, 1168
HpyCH4III	ACNGT	3 cut(s)	607, 1117, 1756
HpyCH4IV	ACGT	3 cut(s)	450, 1069, 2086
HpyF10VI	GCNNNNNNNGC	7 cut(s)	235, 244, 661, 1007, 1090, 1583, 2287
HpyF3I	CTNAG	8 cut(s)	47, 83, 140, 239, 888, 1017, 1062, 2202
HpySE526I	ACGT	3 cut(s)	450, 1069, 2086
HspAI	GCGC	6 cut(s)	51, 53, 165, 175, 236, 1857
Kpn2I	TCCGGA	1 cut(s)	615
KpnI	GGTACC	1 cut(s)	365
Ksp22I	TGATCA	2 cut(s)	265, 1338
KspAI	GTTAAC	1 cut(s)	1047
Kzo9I	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
LmnI	GCTCC	4 cut(s)	661, 1063, 1231, 1437
Lsp1109I	GCAGC	9 cut(s)	41, 220, 513, 549, 1403, 1573, 1846, 1874, 1939
LweI	GCATC	6 cut(s)	45, 216, 234, 622, 1403, 1502
MaeI	CTAG	4 cut(s)	798, 1398, 1469, 2256
MaeII	ACGT	3 cut(s)	450, 1069, 2086
MaeIII	GTNAC	5 cut(s)	412, 422, 934, 1756, 2159
MalI	GATC	8 cut(s)	267, 597, 690, 945, 1340, 1680, 1826, 2275
MboI	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
MfeI	CAATTG	3 cut(s)	870, 1182, 1512
MflI	RGATCY	2 cut(s)	1678, 2273
MhlI	GDGCHC	3 cut(s)	666, 1012, 1060
MlsI	TGGCCA	1 cut(s)	1084
MluNI	TGGCCA	1 cut(s)	1084
MlyI	GAGTC	3 cut(s)	157, 487, 1206
Mox20I	TGGCCA	1 cut(s)	1084
MroI	TCCGGA	1 cut(s)	615
MroXI	GAANNNNTTC	3 cut(s)	1427, 1634, 1637
MscI	TGGCCA	1 cut(s)	1084
MseI	TTAA	6 cut(s)	318, 824, 981, 1046, 1263, 2111
MslI	CAYNNNNRTG	3 cut(s)	1334, 2157, 2249
Msp20I	TGGCCA	1 cut(s)	1084
MspA1I	CMGCKG	3 cut(s)	233, 1001, 1612
MspI	CCGG	5 cut(s)	616, 1290, 1578, 2144, 2236
MspR9I	CCNGG	6 cut(s)	1290, 1643, 1683, 1799, 1844, 2236
MunI	CAATTG	3 cut(s)	870, 1182, 1512
Mva1269I	GAATGC	3 cut(s)	1142, 1865, 2036
MvaI	CCWGG	4 cut(s)	1643, 1683, 1799, 1844
MvnI	CGCG	2 cut(s)	53, 167
MwoI	GCNNNNNNNGC	7 cut(s)	235, 244, 661, 1007, 1090, 1583, 2287
NciI	CCSGG	2 cut(s)	1290, 2236
NcoI	CCATGG	2 cut(s)	1674, 1882
NdeI	CATATG	1 cut(s)	1102
NdeII	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
NlaIV	GGNNCC	5 cut(s)	363, 997, 1059, 1680, 2275
NmeAIII	GCCGAG	1 cut(s)	1716
NmuCI	GTSAC	4 cut(s)	422, 934, 1756, 2159
NsbI	TGCGCA	1 cut(s)	176
NspI	RCATGY	1 cut(s)	519
NspV	TTCGAA	2 cut(s)	784, 2028
OliI	CACNNNNGTG	2 cut(s)	2157, 2249
PaeR7I	CTCGAG	1 cut(s)	1214
PagI	TCATGA	2 cut(s)	940, 1167
PauI	GCGCGC	1 cut(s)	51
PcsI	WCGNNNNNNNCGW	2 cut(s)	1212, 2160
PctI	GAATGC	3 cut(s)	1142, 1865, 2036
PdmI	GAANNNNTTC	3 cut(s)	1427, 1634, 1637
PfeI	GAWTC	7 cut(s)	281, 471, 641, 1171, 1472, 2180, 2198
PflFI	GACNNNGTC	1 cut(s)	107
PfoI	TCCNGGA	1 cut(s)	2234
PleI	GAGTC	3 cut(s)	156, 486, 1206
PmaCI	CACGTG	1 cut(s)	1070
PmlI	CACGTG	1 cut(s)	1070
PpsI	GAGTC	3 cut(s)	156, 486, 1206
Ppu21I	YACGTR	1 cut(s)	1070
Psp6I	CCWGG	4 cut(s)	1641, 1681, 1797, 1842
PspCI	CACGTG	1 cut(s)	1070
PspGI	CCWGG	4 cut(s)	1641, 1681, 1797, 1842
PspN4I	GGNNCC	5 cut(s)	363, 997, 1059, 1680, 2275
PspPI	GGNCC	4 cut(s)	351, 607, 819, 1575
PstI	CTGCAG	3 cut(s)	289, 1591, 1864
PstNI	CAGNNNCTG	1 cut(s)	1496
PsuI	RGATCY	2 cut(s)	1678, 2273
PsyI	GACNNNGTC	1 cut(s)	107
PteI	GCGCGC	1 cut(s)	51
RsaI	GTAC	7 cut(s)	363, 1107, 1188, 1850, 1942, 1989, 2217
RsaNI	GTAC	7 cut(s)	362, 1106, 1187, 1849, 1941, 1988, 2216
RseI	CAYNNNNRTG	3 cut(s)	1334, 2157, 2249
SaqAI	TTAA	6 cut(s)	318, 824, 981, 1046, 1263, 2111
Sau3AI	GATC	8 cut(s)	265, 595, 688, 943, 1338, 1678, 1824, 2273
Sau96I	GGNCC	4 cut(s)	351, 607, 819, 1575
ScaI	AGTACT	1 cut(s)	1989
SchI	GAGTC	3 cut(s)	157, 487, 1206
ScrFI	CCNGG	6 cut(s)	1290, 1643, 1683, 1799, 1844, 2236
SduI	GDGCHC	3 cut(s)	666, 1012, 1060
SfaNI	GCATC	6 cut(s)	45, 216, 234, 622, 1403, 1502
SfcI	CTRYAG	4 cut(s)	285, 333, 1587, 1860
Sfr274I	CTCGAG	1 cut(s)	1214
SfuI	TTCGAA	2 cut(s)	784, 2028
SinI	GGWCC	1 cut(s)	607
SlaI	CTCGAG	1 cut(s)	1214
SmiMI	CAYNNNNRTG	3 cut(s)	1334, 2157, 2249
SmlI	CTYRAG	2 cut(s)	208, 1214
SmoI	CTYRAG	2 cut(s)	208, 1214
SsiI	CCGC	5 cut(s)	231, 298, 966, 999, 1610
SspI	AATATT	1 cut(s)	43
SspMI	CTAG	4 cut(s)	798, 1398, 1469, 2256
StyD4I	CCNGG	6 cut(s)	1288, 1641, 1681, 1797, 1842, 2234
StyI	CCWWGG	3 cut(s)	1432, 1674, 1882
TaaI	ACNGT	3 cut(s)	607, 1117, 1756
TaiI	ACGT	3 cut(s)	453, 1072, 2089
TaqI	TCGA	7 cut(s)	440, 764, 784, 988, 1206, 1215, 2028
TatI	WGTACW	4 cut(s)	1105, 1186, 1940, 1987
TauI	GCSGC	2 cut(s)	968, 1001
TfiI	GAWTC	7 cut(s)	281, 471, 641, 1171, 1472, 2180, 2198
Tru1I	TTAA	6 cut(s)	318, 824, 981, 1046, 1263, 2111
Tru9I	TTAA	6 cut(s)	318, 824, 981, 1046, 1263, 2111
TscAI	CASTG	4 cut(s)	1305, 1903, 2085, 2256
TseFI	GTSAC	4 cut(s)	422, 934, 1756, 2159
TseI	GCWGC	9 cut(s)	29, 233, 526, 562, 1391, 1586, 1859, 1862, 1952
Tsp45I	GTSAC	4 cut(s)	422, 934, 1756, 2159
TspGWI	ACGGA	3 cut(s)	1399, 1764, 1805
TspRI	CASTG	4 cut(s)	1305, 1903, 2085, 2256
Tth111I	GACNNNGTC	1 cut(s)	107
VneI	GTGCAC	1 cut(s)	1008
VpaK11BI	GGWCC	1 cut(s)	607
XagI	CCTNNNNNAGG	1 cut(s)	82
XapI	RAATTY	6 cut(s)	736, 1256, 1349, 1633, 1716, 2107
XbaI	TCTAGA	2 cut(s)	797, 1397
XceI	RCATGY	1 cut(s)	519
XhoI	CTCGAG	1 cut(s)	1214
XmiI	GTMKAC	2 cut(s)	111, 777
XmnI	GAANNNNTTC	3 cut(s)	1427, 1634, 1637
XspI	CTAG	4 cut(s)	798, 1398, 1469, 2256
ZrmI	AGTACT	1 cut(s)	1989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.