Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001682

Physical Location & Seq

Genomic Coordinates Forward (+)

773855 .. 787249

Gene Structure 13395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g01530.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCTACACTAGGGGATATAGGGGTTGGAGCATCCATCAACATCCTTAGTGCCTTCCTTTTCTTTGTAGTATTTGCATTTCTTAGGCTTCAGCCGTTCAACGACAGAGTCTACTTTCCAAAATGGTATTTAAAGGGAGTAAGAGACAGTCCCACGCGCTCTGGCGCATTCGTGAGAAAGTTTGTCAATCTAGACTATAGGTCCTATGTGAGGTTTCTGAACTGGATGCCGGAAGCATTGAAGATGCCGGAACCGGAGCTTATTGATCATGCAGGATTGGATTCTGCTGTTTACTTGAGGATATACTTGATAGGGCTTAAAATCTTTGTTCCAATAGCACTTGTTGCATGGGCGGTTTTGGTACCAGTCAACTGGACAAATAACACTTTGGATATTGCCGCTCATTTAAAGAATGTAACGTCTAGTGACATTGATAGGCTCTCTATATCAAATATTCCAGAAAAATCTCAAAGATTGTGGACTCATATAGTGGTGGCGTATGCCTTTACCTTTTGGACATGTTATGTGCTACTGAAGGAGTATGAGAAAGTAGCCAATATGCGGTTGCATTTTCTTGCCACAGAAAGACGACGACCCGATCAATTTACGGCCCTTGTCAGAAATGTTCCACCAGATCCAGATGAATCTGTAAGTGAGCTTGTGGAGCACTTTTTTCTGGTCAACCATCCGGATCATTATCTCACTCATCAGGTGGTGTACAATGCCAATAAACTTGCGAAATTGGTAAAGAAGAAGAAAAAAATGGATAACTGGCTTGTCTACTACCAAAACAAACTTGAAAGAAGCAAAACTTCAGTGAGGCCCTTGACTAAGACTGGTTTTCTTGGACTTTGGGGAAAGAAAGTTGATGCAATTGAACATTATCAATCTGAGATTGACAAATTAAAGAAGGAAATACCTGAAGAAAGGGAGAAAGTTTCAAACGATCCCAAGTCTATTGTGGCAGCTGCCTTTGTTTCCTTTAAAAGCAGATGGGGTGCTGCTGTTTGTGCACAAACTCAGCAATCTAGGAATCCAACTATTTGGTTAACCGAATGGGCTCCAGAGCCACGCGATGTATATTGGCCAAATCTGGCTATTCCATATGTAGAACTCACAGTTAAGAGGCTCATCATGGGTGTTGCATTCTTTTTCCTCACCTTCTTTTTCATGATCCCCATTGCATTTGTACAATCTCTTGCAAGCATTGAGGGACTTGAGAAAGCAGCTCCATTCCTAAAGCCCATTGTTGAAGTGAAGTTCATCAAGTCAGTCATTACAGGCTTTCTGCCTGGGATTGCACTGAAGTTGTTTCTGATATTTTTGCCAACCATATTGATGATCATGGCTAAATTTGAGGGATATGCATCTCGGTCTTCTCTTGAGAGGAGAGCAGCATCTAGATACTATCTCTTCAGTTTGGTGAATGTATTCCTTGGTAGCATTATAGCTGGATCGGCACTTGAACAGCTAAAAACTTTCATGCACCAATCACCATCTGACATTCCAGTGACAATTGGTACTGCAGTCCCAATAAAAGCAACTTTCTTCATAACATATATAATGGTTGATGGGTGGGCTGGTATTGCTGCGGAGATCTTGATGTTGAAGCCACTTATTATATATCACTTGAAGAATACCTTCCTGGTGAAAACTGACAAGGACAGGGAGGAGGCTATGGATCCTGGAAGTATTGGTTTCAACACTGGGGAGCCTCGTATACAGCTTTATATTTTACTGGGCCTTGTATATGCTACACTGACACCAGTTCTACTTCCATTCATAATTATTTTCTTTGGCCTGGCTTATGTTGTGTTCCGTCATCAGATCATAAATGTTTACAACCAGGAATATGAAAGTGCTGCAGCATTCTGGCCTGATGTCCATGGTCGCATTCTGTCTGCATTGCTTATTTCTCAACTGGTTCTATTGGGATTGTTGACTACCAAAAAAGCTGCTCAGTCTACACCATTTCTTCTTGCACTTCCAGTATTGACCTTTGCATTCTATAAGTATTGCCAAGGTCGTTTTGAACCTGCATTTGTTAGATATCCATTACAGGAAGCGAAGATGAAAGATACTCTGGAAAGCGCAAGAGAACCAAACTTGAACTTGAAAGGCTACCTCCAAAGTGCATATGTCCATCCAGTTTTCAAAGAGTGCGACGACGACGACGATGAAGATCATTACTCGTTTGAAAAGTACGAAAATGAGAGTTGTGTGACTGTGGCCACAAAACGCCAATCCCGACGGAACACTCCAGTGCCTAGCAGGATGACTGATCAATCCACGCCCTCGTTGCCAGATGCTGTTGAAGATCTACAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005227 GO:0005261 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008324 GO:0009628 GO:0009987 GO:0010959 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0016043 GO:0022607 GO:0022803 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0032879 GO:0033554 GO:0034220 GO:0043269 GO:0043933 GO:0044085 GO:0044464 GO:0050789 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051259 GO:0051262 GO:0051716 GO:0051924 GO:0055085 GO:0065003 GO:0065007 GO:0071214 GO:0071470 GO:0071474 GO:0071840 GO:0071944 GO:0090279 GO:0098655 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

777

Amino Acids

88.62

Weight (kDa)

8.95

Isoelectric Point (pI)

46.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	10 - 180	3e-42	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	201 - 308	2e-26	Cytosolic domain of 10TM putative phosphate transporter
PHM7_cyt	PF14703	336 - 395	7.5e-14	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	406 - 678	1.6e-82	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32090
fragaria_vesca	FvH4_3g01530 FvH4_5g23560 FvH4_5g23560 FvH4_5g23560 FvH4_5g23560 FvH4_5g23560 FvH4_5g23560 FvH4_5g23560
malus_domestica	MD06G1023400.v1.1
prunus_persica	Prupe.3G145100_v2.0.a1 Prupe.5G024400_v2.0.a1 Prupe.5G024400_v2.0.a1
pyrus_communis	pycom03g21460 pycom06g01880
rosa_chinensis	RchiOBHm_Chr2g0130361 RchiOBHm_Chr7g0212871
rosa_laevigata	RLG00000002863 RLG00000036352
rosa_multiflora	Rmu_sc0000394.1_g000051 Rmu_sc0000394.1_g000052 Rmu_sc0017945.1_g000005
rosa_roxburghii	Rroxscaffold_2G00133450 Rroxscaffold_2G00135350 Rroxscaffold_3G00246490 Rroxscaffold_4G00293800 Rroxscaffold_4G00312360 Rroxscaffold_4G00322900 Rroxscaffold_5G00343810 Rroxscaffold_5G00343840 Rroxscaffold_5G00352480 Rroxscaffold_7G00204210
rosa_rugosa	Rorug07G0137200 Rorug07G0137300
rosa_samantha	Rh2BG351500 Rh4AG085800 Rh4CG093500 Rh4DG116200 Rh5AG424600 Rh7AG268800 Rh7BG264400 Rh7CG287800 Rh7DG276900 Rh7DG324500
rosa_wichuraiana	Rw2G028960 Rw4G010010 Rw4G015390 Rw5G037750 Rw7G023350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2044
Acc65I	GGTACC	1 cut(s)	361
AccB1I	GGYRCC	1 cut(s)	361
AccBSI	CCGCTC	1 cut(s)	401
AccI	GTMKAC	4 cut(s)	111, 780, 1720, 1964
AccII	CGCG	2 cut(s)	157, 1074
AccIII	TCCGGA	1 cut(s)	688
AciI	CCGC	4 cut(s)	353, 399, 562, 1592
AclWI	GGATC	7 cut(s)	629, 699, 941, 1168, 1462, 1676, 1689
AcoI	YGGCCR	2 cut(s)	1085, 2229
AcsI	RAATTY	1 cut(s)	1352
AcuI	CTGAAG	6 cut(s)	74, 554, 798, 942, 1325, 1399
AfaI	GTAC	5 cut(s)	363, 719, 1191, 1522, 2204
AfiI	CCNNNNNNNGG	2 cut(s)	210, 561
AflIII	ACRYGT	1 cut(s)	518
AhdI	GACNNNNNGTC	1 cut(s)	199
AjnI	CCWGG	5 cut(s)	1291, 1644, 1684, 1800, 1845
AleI	CACNNNNGTG	1 cut(s)	2261
AluBI	AGCT	8 cut(s)	259, 658, 968, 1229, 1451, 1471, 1726, 1955
AluI	AGCT	8 cut(s)	259, 658, 968, 1229, 1451, 1471, 1726, 1955
Alw21I	GWGCWC	2 cut(s)	669, 1015
Alw26I	GTCTC	1 cut(s)	138
Alw44I	GTGCAC	1 cut(s)	1011
AlwI	GGATC	7 cut(s)	629, 699, 941, 1168, 1462, 1676, 1689
AlwNI	CAGNNNCTG	1 cut(s)	2309
Aor13HI	TCCGGA	1 cut(s)	688
AoxI	GGCC	7 cut(s)	609, 821, 1085, 1741, 1798, 1874, 2229
ApaLI	GTGCAC	1 cut(s)	1011
ApeKI	GCWGC	9 cut(s)	965, 968, 1001, 1226, 1394, 1589, 1862, 1865, 1955
ApoI	RAATTY	1 cut(s)	1352
Asp700I	GAANNNNTTC	2 cut(s)	1430, 1640
Asp718I	GGTACC	1 cut(s)	361
AspLEI	GCGC	3 cut(s)	159, 167, 2093
AspS9I	GGNCC	4 cut(s)	201, 610, 822, 1741
AsuHPI	GGTGA	4 cut(s)	1150, 1435, 1485, 1660
AvaII	GGWCC	1 cut(s)	201
BaeGI	GKGCMC	1 cut(s)	1015
BaeI	ACNNNNGTAYC	2 cut(s)	1512, 1545
BalI	TGGCCA	2 cut(s)	1087, 2231
BamHI	GGATCC	1 cut(s)	1681
BanI	GGYRCC	1 cut(s)	361
BanII	GRGCYC	1 cut(s)	1063
BbsI	GAAGAC	1 cut(s)	1368
Bbv12I	GWGCWC	2 cut(s)	669, 1015
BbvI	GCAGC	9 cut(s)	955, 977, 988, 1238, 1406, 1576, 1849, 1877, 1942
BccI	CCATC	6 cut(s)	44, 693, 987, 1504, 1565, 2151
BceAI	ACGGC	2 cut(s)	79, 624
BciT130I	CCWGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
BclI	TGATCA	3 cut(s)	265, 1341, 2281
BcoDI	GTCTC	1 cut(s)	138
BfaI	CTAG	6 cut(s)	11, 191, 423, 1029, 1401, 2268
BfmI	CTRYAG	4 cut(s)	196, 1524, 1863, 2321
BfuAI	ACCTGC	1 cut(s)	2044
BglII	AGATCT	2 cut(s)	1596, 2317
Bme1390I	CCNGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
Bme18I	GGWCC	1 cut(s)	201
BmeRI	GACNNNNNGTC	1 cut(s)	199
BmgT120I	GGNCC	4 cut(s)	201, 610, 822, 1741
BmiI	GGNNCC	5 cut(s)	252, 363, 1062, 1683, 1713
BmrFI	CCNGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
BmrI	ACTGGG	2 cut(s)	1716, 1748
BmsI	GCATC	7 cut(s)	41, 216, 234, 859, 1376, 1406, 2296
BmuI	ACTGGG	2 cut(s)	1716, 1748
BpiI	GAAGAC	1 cut(s)	1368
BpmI	CTGGAG	2 cut(s)	1047, 2244
BpuEI	CTTGAG	3 cut(s)	316, 1238, 1403
BsaBI	GATNNNNATC	3 cut(s)	696, 1366, 2181
BsaJI	CCNNGG	4 cut(s)	1292, 1435, 1885, 2020
BsaWI	WCCGGW	2 cut(s)	253, 688
Bsc4I	CCNNNNNNNGG	2 cut(s)	210, 561
Bse3DI	GCAATG	2 cut(s)	1179, 1904
Bse8I	GATNNNNATC	3 cut(s)	696, 1366, 2181
BseAI	TCCGGA	1 cut(s)	688
BseBI	CCWGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
BseDI	CCNNGG	4 cut(s)	1292, 1435, 1885, 2020
BseGI	GGATG	6 cut(s)	32, 42, 231, 685, 2143, 2280
BseJI	GATNNNNATC	3 cut(s)	696, 1366, 2181
BseLI	CCNNNNNNNGG	2 cut(s)	210, 561
BseMI	GCAATG	2 cut(s)	1179, 1904
BseMII	CTCAG	3 cut(s)	882, 1034, 1973
BseRI	GAGGAG	2 cut(s)	1402, 1685
BseSI	GKGCMC	1 cut(s)	1015
BseXI	GCAGC	9 cut(s)	955, 977, 988, 1238, 1406, 1576, 1849, 1877, 1942
Bsh1236I	CGCG	2 cut(s)	157, 1074
BshFI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2231
BshNI	GGYRCC	1 cut(s)	361
BsiHKAI	GWGCWC	2 cut(s)	669, 1015
BsiSI	CCGG	4 cut(s)	230, 248, 254, 689
BslFI	GGGAC	3 cut(s)	135, 1227, 1514
BslI	CCNNNNNNNGG	2 cut(s)	210, 561
BsmAI	GTCTC	1 cut(s)	138
BsmFI	GGGAC	3 cut(s)	135, 1227, 1514
BsmI	GAATGC	5 cut(s)	167, 1145, 1868, 1893, 2003
BsnI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2231
Bsp1286I	GDGCHC	3 cut(s)	669, 1015, 1063
Bsp13I	TCCGGA	1 cut(s)	688
Bsp1407I	TGTACA	2 cut(s)	717, 1189
Bsp19I	CCATGG	1 cut(s)	1885
BspACI	CCGC	4 cut(s)	353, 399, 562, 1592
BspANI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2231
BspCNI	CTCAG	3 cut(s)	883, 1033, 1972
BspEI	TCCGGA	1 cut(s)	688
BspFNI	CGCG	2 cut(s)	157, 1074
BspHI	TCATGA	1 cut(s)	1170
BspLI	GGNNCC	5 cut(s)	252, 363, 1062, 1683, 1713
BspMAI	CTGCAG	2 cut(s)	1528, 1867
BspMI	ACCTGC	1 cut(s)	2044
BspPI	GGATC	7 cut(s)	629, 699, 941, 1168, 1462, 1676, 1689
BspT107I	GGYRCC	1 cut(s)	361
BsrBI	CCGCTC	1 cut(s)	401
BsrDI	GCAATG	2 cut(s)	1179, 1904
BsrGI	TGTACA	2 cut(s)	717, 1189
BssECI	CCNNGG	4 cut(s)	1292, 1435, 1885, 2020
BssNAI	GTATAC	1 cut(s)	1721
BssT1I	CCWWGG	3 cut(s)	1435, 1885, 2020
Bst1107I	GTATAC	1 cut(s)	1721
Bst2UI	CCWGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
Bst4CI	ACNGT	3 cut(s)	149, 1120, 2227
Bst6I	CTCTTC	1 cut(s)	1418
BstAPI	GCANNNNNTGC	1 cut(s)	344
BstAUI	TGTACA	2 cut(s)	717, 1189
BstC8I	GCNNGC	1 cut(s)	1204
BstDEI	CTNAG	6 cut(s)	47, 83, 831, 891, 1020, 1959
BstDSI	CCRYGG	1 cut(s)	1885
BstENI	CCTNNNNNAGG	1 cut(s)	208
BstF5I	GGATG	6 cut(s)	32, 42, 231, 685, 2143, 2280
BstFNI	CGCG	2 cut(s)	157, 1074
BstHHI	GCGC	3 cut(s)	159, 167, 2093
BstMAI	GTCTC	1 cut(s)	138
BstMWI	GCNNNNNNNGC	6 cut(s)	344, 664, 1010, 1457, 1586, 2299
BstNI	CCWGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
BstNSI	RCATGY	1 cut(s)	522
BstSCI	CCNGG	5 cut(s)	1291, 1644, 1684, 1800, 1845
BstSFI	CTRYAG	4 cut(s)	196, 1524, 1863, 2321
BstSLI	GKGCMC	1 cut(s)	1015
BstUI	CGCG	2 cut(s)	157, 1074
BstV1I	GCAGC	9 cut(s)	955, 977, 988, 1238, 1406, 1576, 1849, 1877, 1942
BstV2I	GAAGAC	1 cut(s)	1368
BstX2I	RGATCY	4 cut(s)	634, 1596, 1681, 2317
BstXI	CCANNNNNNTGG	2 cut(s)	372, 1044
BstYI	RGATCY	4 cut(s)	634, 1596, 1681, 2317
BstZ17I	GTATAC	1 cut(s)	1721
BsuRI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2231
BtgI	CCRYGG	1 cut(s)	1885
BtgZI	GCGATG	1 cut(s)	1089
BtsCI	GGATG	6 cut(s)	32, 42, 231, 685, 2143, 2280
BtsIMutI	CAGTG	6 cut(s)	822, 1301, 1515, 1704, 1757, 2268
BveI	ACCTGC	1 cut(s)	2044
Cac8I	GCNNGC	1 cut(s)	1204
CaiI	CAGNNNCTG	1 cut(s)	2309
CciI	TCATGA	1 cut(s)	1170
CfoI	GCGC	3 cut(s)	159, 167, 2093
Cfr13I	GGNCC	4 cut(s)	201, 610, 822, 1741
Csp6I	GTAC	5 cut(s)	362, 718, 1190, 1521, 2203
CspCI	CAANNNNNGTGG	2 cut(s)	458, 493
CviAII	CATG	8 cut(s)	269, 348, 519, 1135, 1171, 1345, 1483, 1886
CviQI	GTAC	5 cut(s)	362, 718, 1190, 1521, 2203
DdeI	CTNAG	6 cut(s)	47, 83, 831, 891, 1020, 1959
DraI	TTTAAA	3 cut(s)	132, 408, 985
DriI	GACNNNNNGTC	1 cut(s)	199
EaeI	YGGCCR	2 cut(s)	1085, 2229
Eam1104I	CTCTTC	1 cut(s)	1418
Eam1105I	GACNNNNNGTC	1 cut(s)	199
EarI	CTCTTC	1 cut(s)	1418
Eco130I	CCWWGG	3 cut(s)	1435, 1885, 2020
Eco24I	GRGCYC	1 cut(s)	1063
Eco32I	GATATC	1 cut(s)	2051
Eco47I	GGWCC	1 cut(s)	201
Eco57I	CTGAAG	6 cut(s)	74, 554, 798, 942, 1325, 1399
EcoNI	CCTNNNNNAGG	1 cut(s)	208
EcoO109I	RGGNCCY	2 cut(s)	201, 822
EcoRII	CCWGG	5 cut(s)	1291, 1644, 1684, 1800, 1845
EcoRV	GATATC	1 cut(s)	2051
EcoT14I	CCWWGG	3 cut(s)	1435, 1885, 2020
EcoT22I	ATGCAT	1 cut(s)	1369
EcoT38I	GRGCYC	1 cut(s)	1063
ErhI	CCWWGG	3 cut(s)	1435, 1885, 2020
FaeI	CATG	8 cut(s)	272, 351, 522, 1138, 1174, 1348, 1486, 1889
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 1625, 1657
FaqI	GGGAC	3 cut(s)	135, 1227, 1514
FatI	CATG	8 cut(s)	268, 347, 518, 1134, 1170, 1344, 1482, 1885
FauNDI	CATATG	2 cut(s)	1105, 2137
FbaI	TGATCA	3 cut(s)	265, 1341, 2281
FblI	GTMKAC	4 cut(s)	111, 780, 1720, 1964
FokI	GGATG	6 cut(s)	19, 29, 238, 672, 2130, 2287
FriOI	GRGCYC	1 cut(s)	1063
FspBI	CTAG	6 cut(s)	11, 191, 423, 1029, 1401, 2268
GlaI	GCGC	3 cut(s)	158, 166, 2092
GsuI	CTGGAG	2 cut(s)	1047, 2244
HaeIII	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2231
HapII	CCGG	4 cut(s)	230, 248, 254, 689
HhaI	GCGC	3 cut(s)	159, 167, 2093
Hin1II	CATG	8 cut(s)	272, 351, 522, 1138, 1174, 1348, 1486, 1889
Hin6I	GCGC	3 cut(s)	157, 165, 2091
HinP1I	GCGC	3 cut(s)	157, 165, 2091
HincII	GTYRAC	4 cut(s)	370, 682, 1050, 1941
HindII	GTYRAC	4 cut(s)	370, 682, 1050, 1941
HinfI	GANTC	5 cut(s)	108, 281, 481, 644, 1033
HpaI	GTTAAC	1 cut(s)	1050
HpaII	CCGG	4 cut(s)	230, 248, 254, 689
HphI	GGTGA	4 cut(s)	1150, 1435, 1485, 1660
Hpy188I	TCNGA	6 cut(s)	219, 620, 892, 1317, 1501, 1827
Hpy99I	CGWCG	6 cut(s)	594, 2168, 2171, 2174, 2177, 2253
HpyAV	CCTTC	5 cut(s)	64, 529, 904, 1171, 1651
HpyCH4III	ACNGT	3 cut(s)	149, 1120, 2227
HpyCH4IV	ACGT	1 cut(s)	419
HpyF10VI	GCNNNNNNNGC	6 cut(s)	344, 664, 1010, 1457, 1586, 2299
HpyF3I	CTNAG	6 cut(s)	47, 83, 831, 891, 1020, 1959
HpySE526I	ACGT	1 cut(s)	419
Hsp92II	CATG	8 cut(s)	272, 351, 522, 1138, 1174, 1348, 1486, 1889
HspAI	GCGC	3 cut(s)	157, 165, 2091
Kpn2I	TCCGGA	1 cut(s)	688
KpnI	GGTACC	1 cut(s)	365
Ksp22I	TGATCA	3 cut(s)	265, 1341, 2281
KspAI	GTTAAC	1 cut(s)	1050
LmnI	GCTCC	6 cut(s)	29, 256, 664, 1066, 1234, 1711
Lsp1109I	GCAGC	9 cut(s)	955, 977, 988, 1238, 1406, 1576, 1849, 1877, 1942
LweI	GCATC	7 cut(s)	41, 216, 234, 859, 1376, 1406, 2296
MaeI	CTAG	6 cut(s)	11, 191, 423, 1029, 1401, 2268
MaeII	ACGT	1 cut(s)	419
MaeIII	GTNAC	4 cut(s)	415, 425, 1510, 2221
MbiI	CCGCTC	1 cut(s)	401
MfeI	CAATTG	2 cut(s)	873, 1515
MflI	RGATCY	4 cut(s)	634, 1596, 1681, 2317
MhlI	GDGCHC	3 cut(s)	669, 1015, 1063
MlsI	TGGCCA	2 cut(s)	1087, 2231
MluCI	AATT	7 cut(s)	602, 740, 873, 902, 1352, 1515, 1785
MluNI	TGGCCA	2 cut(s)	1087, 2231
MlyI	GAGTC	2 cut(s)	117, 475
MmeI	TCCRAC	2 cut(s)	7, 1061
Mox20I	TGGCCA	2 cut(s)	1087, 2231
Mph1103I	ATGCAT	1 cut(s)	1369
MroI	TCCGGA	1 cut(s)	688
MroXI	GAANNNNTTC	2 cut(s)	1430, 1640
MscI	TGGCCA	2 cut(s)	1087, 2231
MseI	TTAA	7 cut(s)	131, 318, 407, 905, 984, 1049, 1122
MslI	CAYNNNNRTG	3 cut(s)	1337, 1508, 2261
Msp20I	TGGCCA	2 cut(s)	1087, 2231
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	4 cut(s)	230, 248, 254, 689
MspR9I	CCNGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
MunI	CAATTG	2 cut(s)	873, 1515
Mva1269I	GAATGC	5 cut(s)	167, 1145, 1868, 1893, 2003
MvaI	CCWGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
MvnI	CGCG	2 cut(s)	157, 1074
MwoI	GCNNNNNNNGC	6 cut(s)	344, 664, 1010, 1457, 1586, 2299
NcoI	CCATGG	1 cut(s)	1885
NdeI	CATATG	2 cut(s)	1105, 2137
NlaIII	CATG	8 cut(s)	272, 351, 522, 1138, 1174, 1348, 1486, 1889
NlaIV	GGNNCC	5 cut(s)	252, 363, 1062, 1683, 1713
NmuCI	GTSAC	3 cut(s)	425, 1510, 2221
NsiI	ATGCAT	1 cut(s)	1369
NspI	RCATGY	1 cut(s)	522
OliI	CACNNNNGTG	1 cut(s)	2261
PagI	TCATGA	1 cut(s)	1170
PciI	ACATGT	1 cut(s)	518
PcsI	WCGNNNNNNNCGW	2 cut(s)	2172, 2245
PctI	GAATGC	5 cut(s)	167, 1145, 1868, 1893, 2003
PdmI	GAANNNNTTC	2 cut(s)	1430, 1640
PfeI	GAWTC	3 cut(s)	281, 644, 1033
PflFI	GACNNNGTC	1 cut(s)	107
PfoI	TCCNGGA	1 cut(s)	1684
PleI	GAGTC	2 cut(s)	116, 475
PpsI	GAGTC	2 cut(s)	116, 475
PpuMI	RGGWCCY	1 cut(s)	201
PscI	ACATGT	1 cut(s)	518
Psp5II	RGGWCCY	1 cut(s)	201
Psp6I	CCWGG	5 cut(s)	1291, 1644, 1684, 1800, 1845
PspGI	CCWGG	5 cut(s)	1291, 1644, 1684, 1800, 1845
PspN4I	GGNNCC	5 cut(s)	252, 363, 1062, 1683, 1713
PspPI	GGNCC	4 cut(s)	201, 610, 822, 1741
PspPPI	RGGWCCY	1 cut(s)	201
PstI	CTGCAG	2 cut(s)	1528, 1867
PstNI	CAGNNNCTG	1 cut(s)	2309
PsuI	RGATCY	4 cut(s)	634, 1596, 1681, 2317
PsyI	GACNNNGTC	1 cut(s)	107
PvuII	CAGCTG	1 cut(s)	968
RsaI	GTAC	5 cut(s)	363, 719, 1191, 1522, 2204
RsaNI	GTAC	5 cut(s)	362, 718, 1190, 1521, 2203
RseI	CAYNNNNRTG	3 cut(s)	1337, 1508, 2261
SaqAI	TTAA	7 cut(s)	131, 318, 407, 905, 984, 1049, 1122
Sau96I	GGNCC	4 cut(s)	201, 610, 822, 1741
SchI	GAGTC	2 cut(s)	117, 475
ScrFI	CCNGG	5 cut(s)	1293, 1646, 1686, 1802, 1847
SduI	GDGCHC	3 cut(s)	669, 1015, 1063
SfaNI	GCATC	7 cut(s)	41, 216, 234, 859, 1376, 1406, 2296
SfcI	CTRYAG	4 cut(s)	196, 1524, 1863, 2321
SinI	GGWCC	1 cut(s)	201
SmiMI	CAYNNNNRTG	3 cut(s)	1337, 1508, 2261
SmlI	CTYRAG	3 cut(s)	295, 1217, 1382
SmoI	CTYRAG	3 cut(s)	295, 1217, 1382
Sse9I	AATT	7 cut(s)	602, 740, 873, 902, 1352, 1515, 1785
SsiI	CCGC	4 cut(s)	353, 399, 562, 1592
SspI	AATATT	1 cut(s)	454
SspMI	CTAG	6 cut(s)	11, 191, 423, 1029, 1401, 2268
StyD4I	CCNGG	5 cut(s)	1291, 1644, 1684, 1800, 1845
StyI	CCWWGG	3 cut(s)	1435, 1885, 2020
TaaI	ACNGT	3 cut(s)	149, 1120, 2227
TaiI	ACGT	1 cut(s)	422
TaqII	GACCGA	1 cut(s)	1362
TasI	AATT	7 cut(s)	602, 740, 873, 902, 1352, 1515, 1785
TatI	WGTACW	2 cut(s)	717, 1189
TauI	GCSGC	1 cut(s)	401
TfiI	GAWTC	3 cut(s)	281, 644, 1033
Tru1I	TTAA	7 cut(s)	131, 318, 407, 905, 984, 1049, 1122
Tru9I	TTAA	7 cut(s)	131, 318, 407, 905, 984, 1049, 1122
TscAI	CASTG	6 cut(s)	822, 1308, 1515, 1711, 1764, 2268
TseFI	GTSAC	3 cut(s)	425, 1510, 2221
TseI	GCWGC	9 cut(s)	965, 968, 1001, 1226, 1394, 1589, 1862, 1865, 1955
Tsp45I	GTSAC	3 cut(s)	425, 1510, 2221
TspDTI	ATGAA	9 cut(s)	657, 1159, 1252, 1471, 1540, 1771, 1869, 2087, 2193
TspGWI	ACGGA	2 cut(s)	1808, 2266
TspRI	CASTG	6 cut(s)	822, 1308, 1515, 1711, 1764, 2268
Tth111I	GACNNNGTC	1 cut(s)	107
VneI	GTGCAC	1 cut(s)	1011
VpaK11BI	GGWCC	1 cut(s)	201
XagI	CCTNNNNNAGG	1 cut(s)	208
XapI	RAATTY	1 cut(s)	1352
XbaI	TCTAGA	2 cut(s)	190, 1400
XceI	RCATGY	1 cut(s)	522
XcmI	CCANNNNNNNNNTGG	1 cut(s)	958
XmiI	GTMKAC	4 cut(s)	111, 780, 1720, 1964
XmnI	GAANNNNTTC	2 cut(s)	1430, 1640
XspI	CTAG	6 cut(s)	11, 191, 423, 1029, 1401, 2268
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.