Rh4CG093500

Golgi to plasma membrane transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0001682
Physical Location & Seq
Forward (+)
16947459 .. 16953220
5762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG093500.1

Sequence Viewer

Length: 1539 bp
ATGATCCAAAGACCAAGGTTACAGGGAATTGAGATTGTTGCTTTGAAATCAAAGATATGGCATCTACAATCACATAATTTTTCTTTTCTTGTTATATACATAATGCAAATTTACTTGAGAGTTGACGTTATAAATTTCAGGTTTTTTTACCACATAGGATTGGAATACTTGTTCACATTCTGGACTTGTTTCATGTTATACAAGGAGTATAACTATGTAGCATCAATGAGGTTGAAATTCTTAGCTTCACAGTGCAGGCGTGCAGAACAATTCACGGTAGTGGTTAGAAACATACCATATGTCTCTGGTCGTTCAATATCAGACACTGTGGACCAATTCTTCAAAAGAAACCACCCGAATGAGTATCTTTGTCACCAGGCAGTCTACAATGCAAACAAATTTGCCAGACTTGTGAGACAGCGAGATCGGATCCAAAACTGGCTAGACTATTACCAGCTTAAGTATGAAAGGCATCCAAACAAAAAACCAACCACAAAGACAGGATGTTTGGGTCTTTGCGGTAAAAGGGTTGATGCCATCGAGTACTACAAGCAACAGATTAAGTCATTTGATAAAAGAATGGCACTGGAACAAGAAAAGATTCTCAAAGACTCCAAAGCTCTTTTGCCAGTTGCTTTTGTGTCATTTAGTTCACGTATTGTTACATGTCATATCCCATTGCACATTTTATCTTTTTCACTAGTATTGTTACATGTCATATCCCATTGCACAACTCATCTGCTTTGGGCTTCCTGTTACTGTTCATCTTTCCCATGGCATATCAGAAACCTTGGAATATTTCTGAAATTCATCAAGTCATTTCTACAGGGTTTTCTTCCTGGTCTTGCCCTTAAAATATTTTTGTACATTCTCCCGACCGTATTAATGATCATGTCAAAAATTGAGGGGCATATTGCATTATCAACCCTAGAACGGAGAACAGCAGCCAAATACTATTACTTTATGTTAGTCAACGTATTTTTGGGAAGCATAGTGACTGGAACAGCTTTTCAGCAACTGCATGCTTTCCTTCACCAATCACCTACTCAGATTCCGAGAAACATTGGAGAGACTATACCATCAAAGGCTACTTTCTTTATTACATATATAATGGTCGATGGGTGGGCTGCAATTGCTGGTGAGATTCTCCGTTTGAAGCCATTGGTTATATTTCATCTTAAGAACATGTTCTTGGTAAAAACTGAGAGAGATAGGGAGAAGGCAACAAACCCCGGTAGTGTGGATTTTCCAGAGACTCTCCCAAGTCTTCAACTATACTTCCTTCTGGGGATTGTGTATGCTGTGGTTACTCCGATCCTACTGCCTTTTATACTAGTCTTCTTTGCCTTTGCATACTTAGTCTACCGTCATCAGATAATCAATGTCTACAATCAACAATATGAAAGTGCTGCTGCATTCTGGCCACATGTTCATAGCCGCATCATAGCAAGCTTGTTGATATCTCAACTACTGTTGATGGGCTTACTAAGCACAAAAAAGCCTTTGCAGAATGAGGTGAACTGGTTGGGAATGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0006810 GO:0006892 GO:0006893 GO:0008150 GO:0016020 GO:0016192 GO:0048193 GO:0051179 GO:0051234 GO:0098876
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

512

Amino Acids

59.84

Weight (kDa)

9.72

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHM7_cyt PF14703 90 - 220 1.1e-33 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 246 - 496 6e-72 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 131
AccI GTMKAC 3 cut(s) 384, 1362, 1386
AciI CCGC 2 cut(s) 519, 1438
AclWI GGATC 3 cut(s) 424, 437, 1309
AcoI YGGCCR 1 cut(s) 1421
AcsI RAATTY 5 cut(s) 108, 133, 236, 398, 806
AfaI GTAC 2 cut(s) 545, 866
AfiI CCNNNNNNNGG 1 cut(s) 933
AflII CTTAAG 2 cut(s) 458, 1178
AflIII ACRYGT 4 cut(s) 665, 712, 1185, 1426
AgsI TTSAA 6 cut(s) 46, 235, 315, 343, 1156, 1271
AhlI ACTAGT 2 cut(s) 700, 1333
AjnI CCWGG 2 cut(s) 375, 838
AjuI GAANNNNNNNTTGG 2 cut(s) 1175, 1207
AleI CACNNNNGTG 1 cut(s) 278
AloI GAACNNNNNNTCC 2 cut(s) 155, 187
AluBI AGCT 5 cut(s) 245, 457, 620, 1007, 1452
AluI AGCT 5 cut(s) 245, 457, 620, 1007, 1452
Alw26I GTCTC 4 cut(s) 307, 409, 1064, 1247
AlwI GGATC 3 cut(s) 424, 437, 1309
AlwNI CAGNNNCTG 2 cut(s) 326, 1018
AoxI GGCC 1 cut(s) 1421
ApeKI GCWGC 4 cut(s) 944, 1127, 1409, 1412
ApoI RAATTY 5 cut(s) 108, 133, 236, 398, 806
ArsI GACNNNNNNTTYG 2 cut(s) 490, 522
AseI ATTAAT 1 cut(s) 884
Asp700I GAANNNNTTC 2 cut(s) 600, 1187
AspS9I GGNCC 1 cut(s) 331
AsuC2I CCSGG 1 cut(s) 1233
AsuHPI GGTGA 5 cut(s) 365, 1025, 1032, 1151, 1528
AvaII GGWCC 1 cut(s) 331
BalI TGGCCA 1 cut(s) 1423
BamHI GGATCC 1 cut(s) 429
BbsI GAAGAC 2 cut(s) 1259, 1330
BbvI GCAGC 4 cut(s) 956, 1114, 1396, 1399
BccI CCATC 4 cut(s) 545, 1087, 1112, 1471
BcgI CGANNNNNNTGC 2 cut(s) 1303, 1337
BciT130I CCWGG 2 cut(s) 377, 840
BclI TGATCA 1 cut(s) 888
BcnI CCSGG 1 cut(s) 1233
BcoDI GTCTC 4 cut(s) 307, 409, 1064, 1247
BcuI ACTAGT 2 cut(s) 700, 1333
BfaI CTAG 4 cut(s) 443, 701, 929, 1334
BfmI CTRYAG 1 cut(s) 824
BfrI CTTAAG 2 cut(s) 458, 1178
BisI GCNGC 5 cut(s) 945, 1128, 1410, 1413, 1438
BlsI GCNGC 5 cut(s) 946, 1129, 1411, 1414, 1439
BmcAI AGTACT 1 cut(s) 545
Bme1390I CCNGG 3 cut(s) 377, 840, 1233
Bme18I GGWCC 1 cut(s) 331
BmgT120I GGNCC 1 cut(s) 331
BmiI GGNNCC 1 cut(s) 431
BmrFI CCNGG 3 cut(s) 377, 840, 1233
BmsI GCATC 5 cut(s) 70, 230, 481, 523, 1449
BpiI GAAGAC 2 cut(s) 1259, 1330
BpuEI CTTGAG 1 cut(s) 136
BpuMI CCSGG 1 cut(s) 1233
BsaAI YACGTR 1 cut(s) 656
BsaJI CCNNGG 4 cut(s) 14, 773, 790, 1231
Bsc4I CCNNNNNNNGG 1 cut(s) 933
Bse1I ACTGG 5 cut(s) 443, 591, 629, 1003, 1526
Bse3DI GCAATG 2 cut(s) 677, 724
BseBI CCWGG 2 cut(s) 377, 840
BseDI CCNNGG 4 cut(s) 14, 773, 790, 1231
BseGI GGATG 2 cut(s) 472, 509
BseLI CCNNNNNNNGG 1 cut(s) 933
BseMI GCAATG 2 cut(s) 677, 724
BseMII CTCAG 2 cut(s) 1061, 1194
BseNI ACTGG 5 cut(s) 443, 591, 629, 1003, 1526
BseXI GCAGC 4 cut(s) 956, 1114, 1396, 1399
BsgI GTGCAG 2 cut(s) 274, 282
Bsh1285I CGRYCG 1 cut(s) 879
BshFI GGCC 1 cut(s) 1423
BsiEI CGRYCG 1 cut(s) 879
BsiSI CCGG 1 cut(s) 1233
BslI CCNNNNNNNGG 1 cut(s) 933
BsmAI GTCTC 4 cut(s) 307, 409, 1064, 1247
BsmI GAATGC 1 cut(s) 1415
BsnI GGCC 1 cut(s) 1423
Bsp1407I TGTACA 1 cut(s) 864
Bsp143I GATC 5 cut(s) 3, 424, 429, 888, 1314
Bsp19I CCATGG 1 cut(s) 773
BspACI CCGC 2 cut(s) 519, 1438
BspANI GGCC 1 cut(s) 1423
BspCNI CTCAG 2 cut(s) 1060, 1195
BspLI GGNNCC 1 cut(s) 431
BspPI GGATC 3 cut(s) 424, 437, 1309
BspTI CTTAAG 2 cut(s) 458, 1178
BsrDI GCAATG 2 cut(s) 677, 724
BsrGI TGTACA 1 cut(s) 864
BsrI ACTGG 5 cut(s) 443, 591, 629, 1003, 1526
BssECI CCNNGG 4 cut(s) 14, 773, 790, 1231
BssMI GATC 5 cut(s) 3, 424, 429, 888, 1314
BssT1I CCWWGG 3 cut(s) 14, 773, 790
Bst2UI CCWGG 2 cut(s) 377, 840
Bst4CI ACNGT 7 cut(s) 252, 277, 328, 761, 880, 1367, 1473
BstAFI CTTAAG 2 cut(s) 458, 1178
BstAUI TGTACA 1 cut(s) 864
BstBAI YACGTR 1 cut(s) 656
BstC8I GCNNGC 4 cut(s) 257, 261, 1023, 1450
BstDEI CTNAG 5 cut(s) 241, 1047, 1203, 1357, 1487
BstDSI CCRYGG 1 cut(s) 773
BstF5I GGATG 2 cut(s) 472, 509
BstKTI GATC 5 cut(s) 6, 427, 432, 891, 1317
BstMAI GTCTC 4 cut(s) 307, 409, 1064, 1247
BstMBI GATC 5 cut(s) 3, 424, 429, 888, 1314
BstMCI CGRYCG 1 cut(s) 879
BstMWI GCNNNNNNNGC 2 cut(s) 1133, 1488
BstNI CCWGG 2 cut(s) 377, 840
BstNSI RCATGY 5 cut(s) 669, 716, 1025, 1189, 1430
BstSCI CCNGG 3 cut(s) 375, 838, 1231
BstSFI CTRYAG 1 cut(s) 824
BstV1I GCAGC 4 cut(s) 956, 1114, 1396, 1399
BstV2I GAAGAC 2 cut(s) 1259, 1330
BstX2I RGATCY 1 cut(s) 429
BstYI RGATCY 1 cut(s) 429
BsuRI GGCC 1 cut(s) 1423
BtgI CCRYGG 1 cut(s) 773
BtsCI GGATG 2 cut(s) 472, 509
BtsIMutI CAGTG 3 cut(s) 257, 324, 584
Cac8I GCNNGC 4 cut(s) 257, 261, 1023, 1450
CaiI CAGNNNCTG 2 cut(s) 326, 1018
Cfr13I GGNCC 1 cut(s) 331
Csp6I GTAC 2 cut(s) 544, 865
CviAII CATG 8 cut(s) 193, 666, 713, 774, 892, 1022, 1186, 1427
CviQI GTAC 2 cut(s) 544, 865
DdeI CTNAG 5 cut(s) 241, 1047, 1203, 1357, 1487
DpnI GATC 5 cut(s) 5, 426, 431, 890, 1316
DpnII GATC 5 cut(s) 3, 424, 429, 888, 1314
EaeI YGGCCR 1 cut(s) 1421
Eco130I CCWWGG 3 cut(s) 14, 773, 790
Eco32I GATATC 1 cut(s) 1461
Eco47I GGWCC 1 cut(s) 331
EcoRII CCWGG 2 cut(s) 375, 838
EcoRV GATATC 1 cut(s) 1461
EcoT14I CCWWGG 3 cut(s) 14, 773, 790
ErhI CCWWGG 3 cut(s) 14, 773, 790
FaeI CATG 8 cut(s) 196, 669, 716, 777, 895, 1025, 1189, 1430
FatI CATG 8 cut(s) 192, 665, 712, 773, 891, 1021, 1185, 1426
FauNDI CATATG 1 cut(s) 298
FbaI TGATCA 1 cut(s) 888
FblI GTMKAC 3 cut(s) 384, 1362, 1386
Fnu4HI GCNGC 5 cut(s) 945, 1128, 1410, 1413, 1438
FokI GGATG 2 cut(s) 459, 516
Fsp4HI GCNGC 5 cut(s) 945, 1128, 1410, 1413, 1438
FspBI CTAG 4 cut(s) 443, 701, 929, 1334
GluI GCNGC 5 cut(s) 945, 1128, 1410, 1413, 1438
HaeIII GGCC 1 cut(s) 1423
HapII CCGG 1 cut(s) 1233
Hin1II CATG 8 cut(s) 196, 669, 716, 777, 895, 1025, 1189, 1430
HincII GTYRAC 2 cut(s) 124, 973
HindII GTYRAC 2 cut(s) 124, 973
HindIII AAGCTT 1 cut(s) 1450
HinfI GANTC 5 cut(s) 601, 611, 1051, 1144, 1255
HpaII CCGG 1 cut(s) 1233
HphI GGTGA 5 cut(s) 365, 1025, 1032, 1151, 1528
Hpy166II GTNNAC 9 cut(s) 124, 174, 331, 385, 653, 973, 1363, 1387, 1519
Hpy188I TCNGA 8 cut(s) 322, 429, 785, 804, 1050, 1056, 1314, 1374
Hpy188III TCNNGA 3 cut(s) 181, 874, 1250
Hpy8I GTNNAC 9 cut(s) 124, 174, 331, 385, 653, 973, 1363, 1387, 1519
HpyAV CCTTC 3 cut(s) 1040, 1213, 1292
HpyCH4III ACNGT 7 cut(s) 252, 277, 328, 761, 880, 1367, 1473
HpyCH4IV ACGT 3 cut(s) 126, 655, 975
HpyF10VI GCNNNNNNNGC 2 cut(s) 1133, 1488
HpyF3I CTNAG 5 cut(s) 241, 1047, 1203, 1357, 1487
HpySE526I ACGT 3 cut(s) 126, 655, 975
Hsp92II CATG 8 cut(s) 196, 669, 716, 777, 895, 1025, 1189, 1430
Ksp22I TGATCA 1 cut(s) 888
Kzo9I GATC 5 cut(s) 3, 424, 429, 888, 1314
Lsp1109I GCAGC 4 cut(s) 956, 1114, 1396, 1399
LweI GCATC 5 cut(s) 70, 230, 481, 523, 1449
MaeI CTAG 4 cut(s) 443, 701, 929, 1334
MaeII ACGT 3 cut(s) 126, 655, 975
MaeIII GTNAC 7 cut(s) 18, 371, 661, 708, 755, 994, 1306
MalI GATC 5 cut(s) 5, 426, 431, 890, 1316
MboI GATC 5 cut(s) 3, 424, 429, 888, 1314
MboII GAAGA 4 cut(s) 331, 827, 1259, 1330
MfeI CAATTG 1 cut(s) 1131
MflI RGATCY 1 cut(s) 429
MlsI TGGCCA 1 cut(s) 1423
MluNI TGGCCA 1 cut(s) 1423
MlyI GAGTC 2 cut(s) 605, 1249
MnlI CCTC 4 cut(s) 222, 898, 1507, 1527
Mox20I TGGCCA 1 cut(s) 1423
MroXI GAANNNNTTC 2 cut(s) 600, 1187
MscI TGGCCA 1 cut(s) 1423
MseI TTAA 5 cut(s) 459, 561, 852, 884, 1179
MslI CAYNNNNRTG 2 cut(s) 278, 357
Msp20I TGGCCA 1 cut(s) 1423
MspCI CTTAAG 2 cut(s) 458, 1178
MspI CCGG 1 cut(s) 1233
MspR9I CCNGG 3 cut(s) 377, 840, 1233
MunI CAATTG 1 cut(s) 1131
Mva1269I GAATGC 1 cut(s) 1415
MvaI CCWGG 2 cut(s) 377, 840
MwoI GCNNNNNNNGC 2 cut(s) 1133, 1488
NciI CCSGG 1 cut(s) 1233
NcoI CCATGG 1 cut(s) 773
NdeI CATATG 1 cut(s) 298
NdeII GATC 5 cut(s) 3, 424, 429, 888, 1314
NlaIII CATG 8 cut(s) 196, 669, 716, 777, 895, 1025, 1189, 1430
NlaIV GGNNCC 1 cut(s) 431
NmuCI GTSAC 2 cut(s) 371, 994
NspI RCATGY 5 cut(s) 669, 716, 1025, 1189, 1430
OliI CACNNNNGTG 1 cut(s) 278
PaeI GCATGC 1 cut(s) 1025
PciI ACATGT 4 cut(s) 665, 712, 1185, 1426
PctI GAATGC 1 cut(s) 1415
PdmI GAANNNNTTC 2 cut(s) 600, 1187
PfeI GAWTC 3 cut(s) 601, 1051, 1144
PkrI GCNGC 5 cut(s) 946, 1129, 1411, 1414, 1439
PleI GAGTC 2 cut(s) 605, 1249
PpsI GAGTC 2 cut(s) 605, 1249
Ppu21I YACGTR 1 cut(s) 656
PscI ACATGT 4 cut(s) 665, 712, 1185, 1426
PshBI ATTAAT 1 cut(s) 884
PsiI TTATAA 1 cut(s) 131
Psp6I CCWGG 2 cut(s) 375, 838
PspGI CCWGG 2 cut(s) 375, 838
PspN4I GGNNCC 1 cut(s) 431
PspPI GGNCC 1 cut(s) 331
PstNI CAGNNNCTG 2 cut(s) 326, 1018
PsuI RGATCY 1 cut(s) 429
RsaI GTAC 2 cut(s) 545, 866
RsaNI GTAC 2 cut(s) 544, 865
RseI CAYNNNNRTG 2 cut(s) 278, 357
SaqAI TTAA 5 cut(s) 459, 561, 852, 884, 1179
SatI GCNGC 5 cut(s) 945, 1128, 1410, 1413, 1438
Sau3AI GATC 5 cut(s) 3, 424, 429, 888, 1314
Sau96I GGNCC 1 cut(s) 331
ScaI AGTACT 1 cut(s) 545
SchI GAGTC 2 cut(s) 605, 1249
ScrFI CCNGG 3 cut(s) 377, 840, 1233
SfaNI GCATC 5 cut(s) 70, 230, 481, 523, 1449
SfcI CTRYAG 1 cut(s) 824
SinI GGWCC 1 cut(s) 331
SmiMI CAYNNNNRTG 2 cut(s) 278, 357
SmlI CTYRAG 3 cut(s) 115, 458, 1178
SmoI CTYRAG 3 cut(s) 115, 458, 1178
SpeI ACTAGT 2 cut(s) 700, 1333
SphI GCATGC 1 cut(s) 1025
SsiI CCGC 2 cut(s) 519, 1438
SspI AATATT 2 cut(s) 798, 858
SspMI CTAG 4 cut(s) 443, 701, 929, 1334
StyD4I CCNGG 3 cut(s) 375, 838, 1231
StyI CCWWGG 3 cut(s) 14, 773, 790
TaaI ACNGT 7 cut(s) 252, 277, 328, 761, 880, 1367, 1473
TaiI ACGT 3 cut(s) 129, 658, 978
TaqI TCGA 2 cut(s) 540, 1116
TatI WGTACW 2 cut(s) 543, 864
TauI GCSGC 1 cut(s) 1440
TfiI GAWTC 3 cut(s) 601, 1051, 1144
Tru1I TTAA 5 cut(s) 459, 561, 852, 884, 1179
Tru9I TTAA 5 cut(s) 459, 561, 852, 884, 1179
TscAI CASTG 3 cut(s) 257, 331, 591
TseFI GTSAC 2 cut(s) 371, 994
TseI GCWGC 4 cut(s) 944, 1127, 1409, 1412
Tsp45I GTSAC 2 cut(s) 371, 994
TspDTI ATGAA 7 cut(s) 181, 480, 753, 799, 1163, 1416, 1421
TspGWI ACGGA 2 cut(s) 949, 1139
TspRI CASTG 3 cut(s) 257, 331, 591
Vha464I CTTAAG 2 cut(s) 458, 1178
VpaK11BI GGWCC 1 cut(s) 331
VspI ATTAAT 1 cut(s) 884
XapI RAATTY 5 cut(s) 108, 133, 236, 398, 806
XceI RCATGY 5 cut(s) 669, 716, 1025, 1189, 1430
XmiI GTMKAC 3 cut(s) 384, 1362, 1386
XmnI GAANNNNTTC 2 cut(s) 600, 1187
XspI CTAG 4 cut(s) 443, 701, 929, 1334
ZrmI AGTACT 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.