Golgi to plasma membrane transport
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RSN1_TM | PF13967 | 8 - 85 | 1e-13 | Late exocytosis, associated with Golgi transport |
| PHM7_cyt | PF14703 | 106 - 268 | 8.4e-48 | Cytosolic domain of 10TM putative phosphate transporter |
| RSN1_7TM | PF02714 | 279 - 551 | 2.1e-85 | Calcium-dependent channel, 7TM region, putative phosphate |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1756 |
| Acc65I | GGTACC | 1 cut(s) | 104 |
| AccB1I | GGYRCC | 1 cut(s) | 104 |
| AccBSI | CCGCTC | 1 cut(s) | 1869 |
| AccI | GTMKAC | 3 cut(s) | 432, 1551, 1908 |
| AciI | CCGC | 6 cut(s) | 567, 714, 1603, 1867, 2108, 2144 |
| AclWI | GGATC | 2 cut(s) | 472, 485 |
| AcoI | YGGCCR | 2 cut(s) | 1041, 1586 |
| AcsI | RAATTY | 5 cut(s) | 284, 446, 916, 971, 1822 |
| AfaI | GTAC | 4 cut(s) | 106, 593, 1031, 1850 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1098, 2183 |
| AflII | CTTAAG | 3 cut(s) | 506, 826, 1343 |
| AflIII | ACRYGT | 2 cut(s) | 1350, 1591 |
| AhlI | ACTAGT | 1 cut(s) | 1498 |
| AjnI | CCWGG | 2 cut(s) | 423, 1003 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1340, 1372 |
| AleI | CACNNNNGTG | 1 cut(s) | 326 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 203, 235 |
| AluBI | AGCT | 6 cut(s) | 36, 293, 505, 668, 1172, 1617 |
| AluI | AGCT | 6 cut(s) | 36, 293, 505, 668, 1172, 1617 |
| Alw21I | GWGCWC | 1 cut(s) | 727 |
| Alw26I | GTCTC | 4 cut(s) | 355, 457, 1229, 1412 |
| Alw44I | GTGCAC | 1 cut(s) | 723 |
| AlwI | GGATC | 2 cut(s) | 472, 485 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 374, 1183, 1301 |
| AoxI | GGCC | 3 cut(s) | 953, 1041, 1586 |
| ApaLI | GTGCAC | 1 cut(s) | 723 |
| ApeKI | GCWGC | 8 cut(s) | 33, 1109, 1292, 1486, 1574, 1577, 1667, 1931 |
| ApoI | RAATTY | 5 cut(s) | 284, 446, 916, 971, 1822 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 538, 570 |
| AseI | ATTAAT | 1 cut(s) | 1049 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 648, 1352 |
| Asp718I | GGTACC | 1 cut(s) | 104 |
| AspLEI | GCGC | 2 cut(s) | 174, 303 |
| AspS9I | GGNCC | 1 cut(s) | 379 |
| AsuC2I | CCSGG | 2 cut(s) | 1040, 1398 |
| AsuHPI | GGTGA | 5 cut(s) | 392, 413, 1190, 1197, 1316 |
| AsuII | TTCGAA | 1 cut(s) | 2069 |
| AvaII | GGWCC | 1 cut(s) | 379 |
| BaeGI | GKGCMC | 1 cut(s) | 727 |
| BalI | TGGCCA | 1 cut(s) | 1588 |
| BamHI | GGATCC | 1 cut(s) | 477 |
| BanI | GGYRCC | 1 cut(s) | 104 |
| BanII | GRGCYC | 1 cut(s) | 775 |
| BbsI | GAAGAC | 3 cut(s) | 1424, 1495, 2172 |
| Bbv12I | GWGCWC | 1 cut(s) | 727 |
| BbvI | GCAGC | 8 cut(s) | 45, 1121, 1279, 1473, 1561, 1564, 1654, 1918 |
| BccI | CCATC | 7 cut(s) | 593, 1252, 1277, 1636, 1996, 2016, 2026 |
| BceAI | ACGGC | 1 cut(s) | 1028 |
| BciT130I | CCWGG | 2 cut(s) | 425, 1005 |
| BciVI | GTATCC | 1 cut(s) | 1773 |
| BclI | TGATCA | 1 cut(s) | 1053 |
| BcnI | CCSGG | 2 cut(s) | 1040, 1398 |
| BcoDI | GTCTC | 4 cut(s) | 355, 457, 1229, 1412 |
| BcuI | ACTAGT | 1 cut(s) | 1498 |
| BfaI | CTAG | 4 cut(s) | 65, 491, 1094, 1499 |
| BfmI | CTRYAG | 2 cut(s) | 989, 1293 |
| BfrI | CTTAAG | 3 cut(s) | 506, 826, 1343 |
| BfuAI | ACCTGC | 1 cut(s) | 1756 |
| BfuI | GTATCC | 1 cut(s) | 1773 |
| BmcAI | AGTACT | 1 cut(s) | 593 |
| Bme1390I | CCNGG | 4 cut(s) | 425, 1005, 1040, 1398 |
| Bme18I | GGWCC | 1 cut(s) | 379 |
| BmgT120I | GGNCC | 1 cut(s) | 379 |
| BmiI | GGNNCC | 5 cut(s) | 106, 479, 712, 774, 1812 |
| BmrFI | CCNGG | 4 cut(s) | 425, 1005, 1040, 1398 |
| BmsI | GCATC | 6 cut(s) | 278, 529, 571, 840, 1614, 1834 |
| BpiI | GAAGAC | 3 cut(s) | 1424, 1495, 2172 |
| Bpu14I | TTCGAA | 1 cut(s) | 2069 |
| BpuEI | CTTGAG | 1 cut(s) | 1790 |
| BpuMI | CCSGG | 2 cut(s) | 1040, 1398 |
| BsaJI | CCNNGG | 2 cut(s) | 1396, 1779 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 702, 732 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1098, 2183 |
| Bse118I | RCCGGY | 1 cut(s) | 955 |
| Bse1I | ACTGG | 6 cut(s) | 86, 491, 639, 677, 800, 1168 |
| BseBI | CCWGG | 2 cut(s) | 425, 1005 |
| BseDI | CCNNGG | 2 cut(s) | 1396, 1779 |
| BseGI | GGATG | 5 cut(s) | 520, 557, 831, 2013, 2018 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1098, 2183 |
| BseMII | CTCAG | 2 cut(s) | 964, 1359 |
| BseNI | ACTGG | 6 cut(s) | 86, 491, 639, 677, 800, 1168 |
| BseSI | GKGCMC | 1 cut(s) | 727 |
| BseX3I | CGGCCG | 1 cut(s) | 1041 |
| BseXI | GCAGC | 8 cut(s) | 45, 1121, 1279, 1473, 1561, 1564, 1654, 1918 |
| BsgI | GTGCAG | 2 cut(s) | 330, 923 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1044 |
| BshFI | GGCC | 3 cut(s) | 955, 1043, 1588 |
| BshNI | GGYRCC | 1 cut(s) | 104 |
| BsiEI | CGRYCG | 1 cut(s) | 1044 |
| BsiHKAI | GWGCWC | 1 cut(s) | 727 |
| BsiSI | CCGG | 3 cut(s) | 956, 1040, 1398 |
| BslFI | GGGAC | 1 cut(s) | 892 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1098, 2183 |
| BsmAI | GTCTC | 4 cut(s) | 355, 457, 1229, 1412 |
| BsmFI | GGGAC | 1 cut(s) | 892 |
| BsmI | GAATGC | 2 cut(s) | 1580, 1751 |
| BsnI | GGCC | 3 cut(s) | 955, 1043, 1588 |
| Bsp119I | TTCGAA | 1 cut(s) | 2069 |
| Bsp1286I | GDGCHC | 2 cut(s) | 727, 775 |
| Bsp1407I | TGTACA | 1 cut(s) | 1029 |
| Bsp143I | GATC | 3 cut(s) | 472, 477, 1053 |
| Bsp19I | CCATGG | 1 cut(s) | 1779 |
| BspACI | CCGC | 6 cut(s) | 567, 714, 1603, 1867, 2108, 2144 |
| BspANI | GGCC | 3 cut(s) | 955, 1043, 1588 |
| BspCNI | CTCAG | 2 cut(s) | 963, 1360 |
| BspLI | GGNNCC | 5 cut(s) | 106, 479, 712, 774, 1812 |
| BspMAI | CTGCAG | 1 cut(s) | 1297 |
| BspMI | ACCTGC | 1 cut(s) | 1756 |
| BspPI | GGATC | 2 cut(s) | 472, 485 |
| BspT104I | TTCGAA | 1 cut(s) | 2069 |
| BspT107I | GGYRCC | 1 cut(s) | 104 |
| BspTI | CTTAAG | 3 cut(s) | 506, 826, 1343 |
| BsrBI | CCGCTC | 1 cut(s) | 1869 |
| BsrFI | RCCGGY | 1 cut(s) | 955 |
| BsrGI | TGTACA | 1 cut(s) | 1029 |
| BsrI | ACTGG | 6 cut(s) | 86, 491, 639, 677, 800, 1168 |
| BssAI | RCCGGY | 1 cut(s) | 955 |
| BssECI | CCNNGG | 2 cut(s) | 1396, 1779 |
| BssMI | GATC | 3 cut(s) | 472, 477, 1053 |
| BssT1I | CCWWGG | 1 cut(s) | 1779 |
| Bst2UI | CCWGG | 2 cut(s) | 425, 1005 |
| Bst4CI | ACNGT | 8 cut(s) | 61, 318, 325, 376, 1532, 1563, 1638, 2217 |
| BstAFI | CTTAAG | 3 cut(s) | 506, 826, 1343 |
| BstAUI | TGTACA | 1 cut(s) | 1029 |
| BstBI | TTCGAA | 1 cut(s) | 2069 |
| BstC8I | GCNNGC | 4 cut(s) | 305, 309, 1188, 1615 |
| BstDEI | CTNAG | 4 cut(s) | 289, 950, 1368, 1652 |
| BstDSI | CCRYGG | 1 cut(s) | 1779 |
| BstF5I | GGATG | 5 cut(s) | 520, 557, 831, 2013, 2018 |
| BstHHI | GCGC | 2 cut(s) | 174, 303 |
| BstKTI | GATC | 3 cut(s) | 475, 480, 1056 |
| BstMAI | GTCTC | 4 cut(s) | 355, 457, 1229, 1412 |
| BstMBI | GATC | 3 cut(s) | 472, 477, 1053 |
| BstMCI | CGRYCG | 1 cut(s) | 1044 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 722, 1298, 1653 |
| BstNI | CCWGG | 2 cut(s) | 425, 1005 |
| BstNSI | RCATGY | 3 cut(s) | 1190, 1354, 1595 |
| BstSCI | CCNGG | 4 cut(s) | 423, 1003, 1038, 1396 |
| BstSFI | CTRYAG | 2 cut(s) | 989, 1293 |
| BstSLI | GKGCMC | 1 cut(s) | 727 |
| BstV1I | GCAGC | 8 cut(s) | 45, 1121, 1279, 1473, 1561, 1564, 1654, 1918 |
| BstV2I | GAAGAC | 3 cut(s) | 1424, 1495, 2172 |
| BstX2I | RGATCY | 1 cut(s) | 477 |
| BstYI | RGATCY | 1 cut(s) | 477 |
| BstZI | CGGCCG | 1 cut(s) | 1041 |
| BsuI | GTATCC | 1 cut(s) | 1773 |
| BsuRI | GGCC | 3 cut(s) | 955, 1043, 1588 |
| BtgI | CCRYGG | 1 cut(s) | 1779 |
| BtsCI | GGATG | 5 cut(s) | 520, 557, 831, 2013, 2018 |
| BtsIMutI | CAGTG | 2 cut(s) | 372, 632 |
| BveI | ACCTGC | 1 cut(s) | 1756 |
| Cac8I | GCNNGC | 4 cut(s) | 305, 309, 1188, 1615 |
| CaiI | CAGNNNCTG | 3 cut(s) | 374, 1183, 1301 |
| CfoI | GCGC | 2 cut(s) | 174, 303 |
| Cfr10I | RCCGGY | 1 cut(s) | 955 |
| Cfr13I | GGNCC | 1 cut(s) | 379 |
| Csp6I | GTAC | 4 cut(s) | 105, 592, 1030, 1849 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1709, 1744 |
| CviAII | CATG | 8 cut(s) | 241, 883, 1057, 1187, 1351, 1592, 1780, 1886 |
| CviQI | GTAC | 4 cut(s) | 105, 592, 1030, 1849 |
| DdeI | CTNAG | 4 cut(s) | 289, 950, 1368, 1652 |
| DpnI | GATC | 3 cut(s) | 474, 479, 1055 |
| DpnII | GATC | 3 cut(s) | 472, 477, 1053 |
| DraI | TTTAAA | 1 cut(s) | 1827 |
| EaeI | YGGCCR | 2 cut(s) | 1041, 1586 |
| EagI | CGGCCG | 1 cut(s) | 1041 |
| EciI | GGCGGA | 1 cut(s) | 2097 |
| EclXI | CGGCCG | 1 cut(s) | 1041 |
| Eco130I | CCWWGG | 1 cut(s) | 1779 |
| Eco24I | GRGCYC | 1 cut(s) | 775 |
| Eco32I | GATATC | 1 cut(s) | 1626 |
| Eco47I | GGWCC | 1 cut(s) | 379 |
| Eco52I | CGGCCG | 1 cut(s) | 1041 |
| EcoRII | CCWGG | 2 cut(s) | 423, 1003 |
| EcoRV | GATATC | 1 cut(s) | 1626 |
| EcoT14I | CCWWGG | 1 cut(s) | 1779 |
| EcoT38I | GRGCYC | 1 cut(s) | 775 |
| ErhI | CCWWGG | 1 cut(s) | 1779 |
| FaeI | CATG | 8 cut(s) | 244, 886, 1060, 1190, 1354, 1595, 1783, 1889 |
| FaqI | GGGAC | 1 cut(s) | 892 |
| FatI | CATG | 8 cut(s) | 240, 882, 1056, 1186, 1350, 1591, 1779, 1885 |
| FauNDI | CATATG | 1 cut(s) | 346 |
| FbaI | TGATCA | 1 cut(s) | 1053 |
| FblI | GTMKAC | 3 cut(s) | 432, 1551, 1908 |
| FokI | GGATG | 5 cut(s) | 507, 564, 818, 2000, 2005 |
| FriOI | GRGCYC | 1 cut(s) | 775 |
| FspBI | CTAG | 4 cut(s) | 65, 491, 1094, 1499 |
| GlaI | GCGC | 2 cut(s) | 173, 302 |
| HaeIII | GGCC | 3 cut(s) | 955, 1043, 1588 |
| HapII | CCGG | 3 cut(s) | 956, 1040, 1398 |
| HhaI | GCGC | 2 cut(s) | 174, 303 |
| Hin1II | CATG | 8 cut(s) | 244, 886, 1060, 1190, 1354, 1595, 1783, 1889 |
| Hin6I | GCGC | 2 cut(s) | 172, 301 |
| HinP1I | GCGC | 2 cut(s) | 172, 301 |
| HincII | GTYRAC | 2 cut(s) | 762, 1138 |
| HindII | GTYRAC | 2 cut(s) | 762, 1138 |
| HindIII | AAGCTT | 1 cut(s) | 1615 |
| HinfI | GANTC | 6 cut(s) | 649, 659, 745, 1216, 1309, 1889 |
| HpaII | CCGG | 3 cut(s) | 956, 1040, 1398 |
| HphI | GGTGA | 5 cut(s) | 392, 413, 1190, 1197, 1316 |
| Hpy188I | TCNGA | 7 cut(s) | 370, 477, 836, 1221, 1539, 1757, 1904 |
| Hpy188III | TCNNGA | 4 cut(s) | 229, 776, 929, 1415 |
| HpyAV | CCTTC | 4 cut(s) | 1205, 1243, 1378, 1457 |
| HpyCH4III | ACNGT | 8 cut(s) | 61, 318, 325, 376, 1532, 1563, 1638, 2217 |
| HpyCH4IV | ACGT | 2 cut(s) | 703, 1140 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 722, 1298, 1653 |
| HpyF3I | CTNAG | 4 cut(s) | 289, 950, 1368, 1652 |
| HpySE526I | ACGT | 2 cut(s) | 703, 1140 |
| Hsp92II | CATG | 8 cut(s) | 244, 886, 1060, 1190, 1354, 1595, 1783, 1889 |
| HspAI | GCGC | 2 cut(s) | 172, 301 |
| KpnI | GGTACC | 1 cut(s) | 108 |
| Ksp22I | TGATCA | 1 cut(s) | 1053 |
| Kzo9I | GATC | 3 cut(s) | 472, 477, 1053 |
| LmnI | GCTCC | 4 cut(s) | 710, 778, 946, 1939 |
| Lsp1109I | GCAGC | 8 cut(s) | 45, 1121, 1279, 1473, 1561, 1564, 1654, 1918 |
| LweI | GCATC | 6 cut(s) | 278, 529, 571, 840, 1614, 1834 |
| MaeI | CTAG | 4 cut(s) | 65, 491, 1094, 1499 |
| MaeII | ACGT | 2 cut(s) | 703, 1140 |
| MaeIII | GTNAC | 6 cut(s) | 25, 140, 419, 800, 1159, 1471 |
| MalI | GATC | 3 cut(s) | 474, 479, 1055 |
| MbiI | CCGCTC | 1 cut(s) | 1869 |
| MboI | GATC | 3 cut(s) | 472, 477, 1053 |
| MboII | GAAGA | 7 cut(s) | 52, 868, 992, 1424, 1495, 2144, 2177 |
| MflI | RGATCY | 1 cut(s) | 477 |
| MhlI | GDGCHC | 2 cut(s) | 727, 775 |
| MlsI | TGGCCA | 1 cut(s) | 1588 |
| MluNI | TGGCCA | 1 cut(s) | 1588 |
| MlyI | GAGTC | 2 cut(s) | 653, 1898 |
| MnlI | CCTC | 8 cut(s) | 270, 916, 1063, 1765, 1870, 1980, 2053, 2113 |
| Mox20I | TGGCCA | 1 cut(s) | 1588 |
| MroXI | GAANNNNTTC | 2 cut(s) | 648, 1352 |
| MscI | TGGCCA | 1 cut(s) | 1588 |
| MslI | CAYNNNNRTG | 2 cut(s) | 326, 405 |
| Msp20I | TGGCCA | 1 cut(s) | 1588 |
| MspA1I | CMGCKG | 1 cut(s) | 716 |
| MspCI | CTTAAG | 3 cut(s) | 506, 826, 1343 |
| MspI | CCGG | 3 cut(s) | 956, 1040, 1398 |
| MspR9I | CCNGG | 4 cut(s) | 425, 1005, 1040, 1398 |
| Mva1269I | GAATGC | 2 cut(s) | 1580, 1751 |
| MvaI | CCWGG | 2 cut(s) | 425, 1005 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 722, 1298, 1653 |
| NciI | CCSGG | 2 cut(s) | 1040, 1398 |
| NcoI | CCATGG | 1 cut(s) | 1779 |
| NdeI | CATATG | 1 cut(s) | 346 |
| NdeII | GATC | 3 cut(s) | 472, 477, 1053 |
| NlaIII | CATG | 8 cut(s) | 244, 886, 1060, 1190, 1354, 1595, 1783, 1889 |
| NlaIV | GGNNCC | 5 cut(s) | 106, 479, 712, 774, 1812 |
| NmuCI | GTSAC | 4 cut(s) | 25, 140, 419, 1159 |
| NspI | RCATGY | 3 cut(s) | 1190, 1354, 1595 |
| NspV | TTCGAA | 1 cut(s) | 2069 |
| OliI | CACNNNNGTG | 1 cut(s) | 326 |
| PaeI | GCATGC | 1 cut(s) | 1190 |
| PciI | ACATGT | 2 cut(s) | 1350, 1591 |
| PctI | GAATGC | 2 cut(s) | 1580, 1751 |
| PdmI | GAANNNNTTC | 2 cut(s) | 648, 1352 |
| PfeI | GAWTC | 4 cut(s) | 649, 745, 1216, 1309 |
| PleI | GAGTC | 2 cut(s) | 653, 1897 |
| PpsI | GAGTC | 2 cut(s) | 653, 1897 |
| PscI | ACATGT | 2 cut(s) | 1350, 1591 |
| PshBI | ATTAAT | 1 cut(s) | 1049 |
| Psp6I | CCWGG | 2 cut(s) | 423, 1003 |
| PspGI | CCWGG | 2 cut(s) | 423, 1003 |
| PspN4I | GGNNCC | 5 cut(s) | 106, 479, 712, 774, 1812 |
| PspPI | GGNCC | 1 cut(s) | 379 |
| PstI | CTGCAG | 1 cut(s) | 1297 |
| PstNI | CAGNNNCTG | 3 cut(s) | 374, 1183, 1301 |
| PsuI | RGATCY | 1 cut(s) | 477 |
| RsaI | GTAC | 4 cut(s) | 106, 593, 1031, 1850 |
| RsaNI | GTAC | 4 cut(s) | 105, 592, 1030, 1849 |
| RseI | CAYNNNNRTG | 2 cut(s) | 326, 405 |
| Sau3AI | GATC | 3 cut(s) | 472, 477, 1053 |
| Sau96I | GGNCC | 1 cut(s) | 379 |
| ScaI | AGTACT | 1 cut(s) | 593 |
| SchI | GAGTC | 2 cut(s) | 653, 1898 |
| ScrFI | CCNGG | 4 cut(s) | 425, 1005, 1040, 1398 |
| SduI | GDGCHC | 2 cut(s) | 727, 775 |
| SfaNI | GCATC | 6 cut(s) | 278, 529, 571, 840, 1614, 1834 |
| SfcI | CTRYAG | 2 cut(s) | 989, 1293 |
| SfuI | TTCGAA | 1 cut(s) | 2069 |
| SinI | GGWCC | 1 cut(s) | 379 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 326, 405 |
| SmlI | CTYRAG | 4 cut(s) | 506, 826, 1343, 1769 |
| SmoI | CTYRAG | 4 cut(s) | 506, 826, 1343, 1769 |
| SpeI | ACTAGT | 1 cut(s) | 1498 |
| SphI | GCATGC | 1 cut(s) | 1190 |
| SsiI | CCGC | 6 cut(s) | 567, 714, 1603, 1867, 2108, 2144 |
| SspI | AATATT | 2 cut(s) | 1023, 1727 |
| SspMI | CTAG | 4 cut(s) | 65, 491, 1094, 1499 |
| StyD4I | CCNGG | 4 cut(s) | 423, 1003, 1038, 1396 |
| StyI | CCWWGG | 1 cut(s) | 1779 |
| TaaI | ACNGT | 8 cut(s) | 61, 318, 325, 376, 1532, 1563, 1638, 2217 |
| TaiI | ACGT | 2 cut(s) | 706, 1143 |
| TaqI | TCGA | 6 cut(s) | 98, 182, 588, 1247, 1281, 2069 |
| TatI | WGTACW | 2 cut(s) | 591, 1029 |
| TauI | GCSGC | 2 cut(s) | 716, 1605 |
| TfiI | GAWTC | 4 cut(s) | 649, 745, 1216, 1309 |
| TscAI | CASTG | 2 cut(s) | 379, 639 |
| TseFI | GTSAC | 4 cut(s) | 25, 140, 419, 1159 |
| TseI | GCWGC | 8 cut(s) | 33, 1109, 1292, 1486, 1574, 1577, 1667, 1931 |
| Tsp45I | GTSAC | 4 cut(s) | 25, 140, 419, 1159 |
| TspDTI | ATGAA | 9 cut(s) | 17, 229, 528, 964, 1328, 1581, 1586, 2145, 2178 |
| TspGWI | ACGGA | 4 cut(s) | 847, 1114, 1304, 1823 |
| TspRI | CASTG | 2 cut(s) | 379, 639 |
| Vha464I | CTTAAG | 3 cut(s) | 506, 826, 1343 |
| VneI | GTGCAC | 1 cut(s) | 723 |
| VpaK11BI | GGWCC | 1 cut(s) | 379 |
| VspI | ATTAAT | 1 cut(s) | 1049 |
| XapI | RAATTY | 5 cut(s) | 284, 446, 916, 971, 1822 |
| XceI | RCATGY | 3 cut(s) | 1190, 1354, 1595 |
| XmiI | GTMKAC | 3 cut(s) | 432, 1551, 1908 |
| XmnI | GAANNNNTTC | 2 cut(s) | 648, 1352 |
| XspI | CTAG | 4 cut(s) | 65, 491, 1094, 1499 |
| ZrmI | AGTACT | 1 cut(s) | 593 |