Rh7AG268800

Golgi to plasma membrane transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0001682
Physical Location & Seq
Reverse (-)
27991528 .. 28000745
9218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG268800.1

Sequence Viewer

Length: 1254 bp
ATGGCAACTCTTGGGGATATTGGGGTCTCTGCATTCATCAATATAGTGGGTGCCATAACCTTCCTTCTGGCCTTTGCTCTTCTGAGGATTCAGCCTGTGAATGACAGGGTCTACTTTCCCAAATGGTACCTCAGTGGCAAGAGAACCAGCCCGAGAAGAGGGTCTGGCAACTTTGTGGGCAAGTTTGTCAATCTCAATTGCTGGACTTACTTCACTTTCTTGAATTGGATGCCTCAAGCCATGAGAATGACTGAAGCTGAGATTATCAACCATGCTGGCCTTGACTCTGCTGCTTTTCTCAGAATTTACATTCTGGGCTTGAAGATTTTTGTTCCAATGACAGTCCTAGCACTTCTTATTCTTATTCCAGTCAATGTATCGAGTGGTACCTTATTTTTCTTAAAGAAAGAGTTGGTTTTGAGTGACATTGATAGGCTCTCTATATCAAATGTGCGCCCCAAGTCGATAAGGTTTTTTTACCACATAGGATTGGAATACTTGTTCACATTCTGGACTTGTTTCATGTTATACAAGGAGTATAACTATGTAGCATCAATGAGGTTGAAATTCTTAGCTTCACAGCGCAGGCGTGCAGAACAGTTCACGGTAGTGGTTAGAAACATACCATATGTCTCTGGTCGTTCAATATCAGACACTGTGGACCAATACTTCAAAAGAAACCACCCGAATGAGTATCTTTGTCATCAGGCAGTCTACAATGCAAACAAATTTGCCAGACTTGTGAGACAGCGAGATCGGATCCAAAACTGGCTAGACTATTACCAGCTTAAGTATGAAAGGCATCCAAACAAAAAACCAACCACAAAGACAGGATGTTTGGGTCTTTGCGGTAAAAGGGTTGATGCCATCGAGTACTACAAGCAACAGATTAAGTCATTTGATAAAAGAATGGCACTGGAACAAGAAAAGATTCTCAAAGACTCCAAAGCTCTTTTGCCAGTTGCTTTTGTATCATTTAGTTCACGTTGGGGAGCCGCTGTTTGTGCACAGACAACGCAGAGCAAGAATCCGACGCTGTGGTTGACAAATTGGGCTCCTGAACCCCGTGATATTTACTGGCGTAACTTGGCTATTCCATTTGTTTCCTTAAGCATCCGAAAACTTGTAATATCGCTATCTGTGTTTGCTTTGGTGTTCTTCTACATGATACCCATAGCCTTTGTGCAGTCCCTTGCAAATTTAGAGGGTCTGGAAAGAGTTGCTCCTTTTCTCAGGCCAGTAATAGAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0006810 GO:0006892 GO:0006893 GO:0008150 GO:0016020 GO:0016192 GO:0048193 GO:0051179 GO:0051234 GO:0098876
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

417

Amino Acids

48.38

Weight (kDa)

9.9

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 7 - 179 2.9e-38 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 200 - 362 4.3e-48 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 373 - 416 5.8e-08 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 126, 386
AccB1I GGYRCC 3 cut(s) 50, 126, 386
AccI GTMKAC 2 cut(s) 111, 714
AciI CCGC 2 cut(s) 849, 996
AclWI GGATC 2 cut(s) 754, 767
AcsI RAATTY 4 cut(s) 303, 566, 728, 1198
AcuI CTGAAG 1 cut(s) 273
AfaI GTAC 3 cut(s) 128, 388, 875
AfiI CCNNNNNNNGG 1 cut(s) 158
AflII CTTAAG 2 cut(s) 788, 1108
AgsI TTSAA 5 cut(s) 223, 322, 565, 645, 673
AleI CACNNNNGTG 1 cut(s) 608
AloI GAACNNNNNNTCC 2 cut(s) 485, 517
AluBI AGCT 4 cut(s) 257, 575, 787, 950
AluI AGCT 4 cut(s) 257, 575, 787, 950
Alw21I GWGCWC 1 cut(s) 1009
Alw26I GTCTC 3 cut(s) 31, 637, 739
Alw44I GTGCAC 1 cut(s) 1005
AlwI GGATC 2 cut(s) 754, 767
AlwNI CAGNNNCTG 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 151
AoxI GGCC 3 cut(s) 69, 277, 1235
ApaLI GTGCAC 1 cut(s) 1005
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 4 cut(s) 303, 566, 728, 1198
ArsI GACNNNNNNTTYG 2 cut(s) 820, 852
Asp700I GAANNNNTTC 1 cut(s) 930
Asp718I GGTACC 2 cut(s) 126, 386
AspLEI GCGC 2 cut(s) 456, 585
AspS9I GGNCC 1 cut(s) 661
AvaI CYCGRG 1 cut(s) 151
AvaII GGWCC 1 cut(s) 661
BaeGI GKGCMC 1 cut(s) 1009
BaeI ACNNNNGTAYC 2 cut(s) 118, 151
BamHI GGATCC 1 cut(s) 759
BanI GGYRCC 3 cut(s) 50, 126, 386
BanII GRGCYC 1 cut(s) 1057
Bbv12I GWGCWC 1 cut(s) 1009
BbvI GCAGC 1 cut(s) 277
BccI CCATC 1 cut(s) 875
BcoDI GTCTC 3 cut(s) 31, 637, 739
BfaI CTAG 2 cut(s) 347, 773
BfrI CTTAAG 2 cut(s) 788, 1108
BisI GCNGC 2 cut(s) 291, 996
BlsI GCNGC 2 cut(s) 292, 997
BmcAI AGTACT 1 cut(s) 875
Bme18I GGWCC 1 cut(s) 661
BmeT110I CYCGRG 1 cut(s) 151
BmgT120I GGNCC 1 cut(s) 661
BmiI GGNNCC 6 cut(s) 52, 128, 388, 761, 994, 1056
BmsI GCATC 5 cut(s) 219, 560, 811, 853, 1122
BpuEI CTTGAG 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 31
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 1 cut(s) 158
Bse1I ACTGG 6 cut(s) 368, 773, 921, 959, 1082, 1238
BseGI GGATG 4 cut(s) 234, 802, 839, 1113
BseLI CCNNNNNNNGG 1 cut(s) 158
BseMII CTCAG 5 cut(s) 74, 145, 249, 313, 1246
BseNI ACTGG 6 cut(s) 368, 773, 921, 959, 1082, 1238
BseSI GKGCMC 1 cut(s) 1009
BseXI GCAGC 1 cut(s) 277
BsgI GTGCAG 2 cut(s) 612, 1205
BshFI GGCC 3 cut(s) 71, 279, 1237
BshNI GGYRCC 3 cut(s) 50, 126, 386
BsiHKAI GWGCWC 1 cut(s) 1009
BsiHKCI CYCGRG 1 cut(s) 151
BslFI GGGAC 1 cut(s) 1174
BslI CCNNNNNNNGG 1 cut(s) 158
BsmAI GTCTC 3 cut(s) 31, 637, 739
BsmFI GGGAC 1 cut(s) 1174
BsmI GAATGC 1 cut(s) 32
BsnI GGCC 3 cut(s) 71, 279, 1237
Bso31I GGTCTC 1 cut(s) 31
BsoBI CYCGRG 1 cut(s) 151
Bsp1286I GDGCHC 2 cut(s) 1009, 1057
Bsp143I GATC 2 cut(s) 754, 759
BspACI CCGC 2 cut(s) 849, 996
BspANI GGCC 3 cut(s) 71, 279, 1237
BspCNI CTCAG 5 cut(s) 75, 144, 250, 312, 1245
BspLI GGNNCC 6 cut(s) 52, 128, 388, 761, 994, 1056
BspPI GGATC 2 cut(s) 754, 767
BspQI GCTCTTC 1 cut(s) 84
BspT107I GGYRCC 3 cut(s) 50, 126, 386
BspTI CTTAAG 2 cut(s) 788, 1108
BspTNI GGTCTC 1 cut(s) 31
BsrI ACTGG 6 cut(s) 368, 773, 921, 959, 1082, 1238
BssMI GATC 2 cut(s) 754, 759
Bst4CI ACNGT 4 cut(s) 343, 600, 607, 658
Bst6I CTCTTC 2 cut(s) 84, 151
BstAFI CTTAAG 2 cut(s) 788, 1108
BstC8I GCNNGC 3 cut(s) 277, 587, 591
BstDEI CTNAG 6 cut(s) 83, 131, 258, 299, 571, 1232
BstF5I GGATG 4 cut(s) 234, 802, 839, 1113
BstHHI GCGC 2 cut(s) 456, 585
BstKTI GATC 2 cut(s) 757, 762
BstMAI GTCTC 3 cut(s) 31, 637, 739
BstMBI GATC 2 cut(s) 754, 759
BstMWI GCNNNNNNNGC 1 cut(s) 1004
BstSLI GKGCMC 1 cut(s) 1009
BstV1I GCAGC 1 cut(s) 277
BstX2I RGATCY 1 cut(s) 759
BstYI RGATCY 1 cut(s) 759
BsuRI GGCC 3 cut(s) 71, 279, 1237
BtsCI GGATG 4 cut(s) 234, 802, 839, 1113
BtsIMutI CAGTG 3 cut(s) 139, 654, 914
Cac8I GCNNGC 3 cut(s) 277, 587, 591
CaiI CAGNNNCTG 1 cut(s) 656
CfoI GCGC 2 cut(s) 456, 585
Cfr13I GGNCC 1 cut(s) 661
CseI GACGC 1 cut(s) 1042
Csp6I GTAC 3 cut(s) 127, 387, 874
CviAII CATG 4 cut(s) 241, 272, 523, 1165
CviQI GTAC 3 cut(s) 127, 387, 874
DdeI CTNAG 6 cut(s) 83, 131, 258, 299, 571, 1232
DpnI GATC 2 cut(s) 756, 761
DpnII GATC 2 cut(s) 754, 759
Eam1104I CTCTTC 2 cut(s) 84, 151
EarI CTCTTC 2 cut(s) 84, 151
Eco24I GRGCYC 1 cut(s) 1057
Eco31I GGTCTC 1 cut(s) 31
Eco47I GGWCC 1 cut(s) 661
Eco57I CTGAAG 1 cut(s) 273
Eco88I CYCGRG 1 cut(s) 151
EcoT38I GRGCYC 1 cut(s) 1057
FaeI CATG 4 cut(s) 244, 275, 526, 1168
FaqI GGGAC 1 cut(s) 1174
FatI CATG 4 cut(s) 240, 271, 522, 1164
FauNDI CATATG 1 cut(s) 628
FblI GTMKAC 2 cut(s) 111, 714
Fnu4HI GCNGC 2 cut(s) 291, 996
FokI GGATG 4 cut(s) 241, 789, 846, 1100
FriOI GRGCYC 1 cut(s) 1057
Fsp4HI GCNGC 2 cut(s) 291, 996
FspBI CTAG 2 cut(s) 347, 773
GlaI GCGC 2 cut(s) 455, 584
GluI GCNGC 2 cut(s) 291, 996
HaeIII GGCC 3 cut(s) 71, 279, 1237
HgaI GACGC 1 cut(s) 1042
HhaI GCGC 2 cut(s) 456, 585
Hin1II CATG 4 cut(s) 244, 275, 526, 1168
Hin6I GCGC 2 cut(s) 454, 583
HinP1I GCGC 2 cut(s) 454, 583
HincII GTYRAC 1 cut(s) 1044
HindII GTYRAC 1 cut(s) 1044
HinfI GANTC 5 cut(s) 88, 284, 931, 941, 1027
Hpy166II GTNNAC 8 cut(s) 112, 504, 603, 661, 715, 983, 1007, 1044
Hpy188I TCNGA 6 cut(s) 84, 302, 652, 759, 1032, 1118
Hpy188III TCNNGA 4 cut(s) 220, 511, 1058, 1211
Hpy8I GTNNAC 8 cut(s) 112, 504, 603, 661, 715, 983, 1007, 1044
Hpy99I CGWCG 1 cut(s) 1036
HpyAV CCTTC 2 cut(s) 70, 74
HpyCH4III ACNGT 4 cut(s) 343, 600, 607, 658
HpyCH4IV ACGT 1 cut(s) 985
HpyCH4V TGCA 6 cut(s) 32, 593, 722, 1007, 1186, 1196
HpyF10VI GCNNNNNNNGC 1 cut(s) 1004
HpyF3I CTNAG 6 cut(s) 83, 131, 258, 299, 571, 1232
HpySE526I ACGT 1 cut(s) 985
Hsp92II CATG 4 cut(s) 244, 275, 526, 1168
HspAI GCGC 2 cut(s) 454, 583
KpnI GGTACC 2 cut(s) 130, 390
Kzo9I GATC 2 cut(s) 754, 759
LguI GCTCTTC 1 cut(s) 84
LmnI GCTCC 3 cut(s) 992, 1060, 1228
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 5 cut(s) 219, 560, 811, 853, 1122
MaeI CTAG 2 cut(s) 347, 773
MaeII ACGT 1 cut(s) 985
MaeIII GTNAC 2 cut(s) 422, 1082
MalI GATC 2 cut(s) 756, 761
MboI GATC 2 cut(s) 754, 759
MboII GAAGA 4 cut(s) 71, 168, 334, 1150
MfeI CAATTG 1 cut(s) 196
MflI RGATCY 1 cut(s) 759
MhlI GDGCHC 2 cut(s) 1009, 1057
MluCI AATT 8 cut(s) 196, 223, 303, 566, 728, 1048, 1198, 1247
MlyI GAGTC 2 cut(s) 278, 935
MmeI TCCRAC 1 cut(s) 1055
MnlI CCTC 6 cut(s) 78, 140, 152, 243, 552, 1198
MroXI GAANNNNTTC 1 cut(s) 930
MseI TTAA 4 cut(s) 401, 789, 891, 1109
MslI CAYNNNNRTG 3 cut(s) 245, 608, 687
MspA1I CMGCKG 1 cut(s) 998
MspCI CTTAAG 2 cut(s) 788, 1108
MunI CAATTG 1 cut(s) 196
Mva1269I GAATGC 1 cut(s) 32
MwoI GCNNNNNNNGC 1 cut(s) 1004
NdeI CATATG 1 cut(s) 628
NdeII GATC 2 cut(s) 754, 759
NlaIII CATG 4 cut(s) 244, 275, 526, 1168
NlaIV GGNNCC 6 cut(s) 52, 128, 388, 761, 994, 1056
NmuCI GTSAC 1 cut(s) 422
OliI CACNNNNGTG 1 cut(s) 608
PciSI GCTCTTC 1 cut(s) 84
PctI GAATGC 1 cut(s) 32
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 3 cut(s) 88, 931, 1027
PflFI GACNNNGTC 1 cut(s) 107
PkrI GCNGC 2 cut(s) 292, 997
PleI GAGTC 2 cut(s) 278, 935
PpsI GAGTC 2 cut(s) 278, 935
PspN4I GGNNCC 6 cut(s) 52, 128, 388, 761, 994, 1056
PspPI GGNCC 1 cut(s) 661
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 1 cut(s) 759
PsyI GACNNNGTC 1 cut(s) 107
RsaI GTAC 3 cut(s) 128, 388, 875
RsaNI GTAC 3 cut(s) 127, 387, 874
RseI CAYNNNNRTG 3 cut(s) 245, 608, 687
SapI GCTCTTC 1 cut(s) 84
SaqAI TTAA 4 cut(s) 401, 789, 891, 1109
SatI GCNGC 2 cut(s) 291, 996
Sau3AI GATC 2 cut(s) 754, 759
Sau96I GGNCC 1 cut(s) 661
ScaI AGTACT 1 cut(s) 875
SchI GAGTC 2 cut(s) 278, 935
SduI GDGCHC 2 cut(s) 1009, 1057
SfaNI GCATC 5 cut(s) 219, 560, 811, 853, 1122
SinI GGWCC 1 cut(s) 661
SmiMI CAYNNNNRTG 3 cut(s) 245, 608, 687
SmlI CTYRAG 3 cut(s) 234, 788, 1108
SmoI CTYRAG 3 cut(s) 234, 788, 1108
Sse9I AATT 8 cut(s) 196, 223, 303, 566, 728, 1048, 1198, 1247
SsiI CCGC 2 cut(s) 849, 996
SspMI CTAG 2 cut(s) 347, 773
TaaI ACNGT 4 cut(s) 343, 600, 607, 658
TaiI ACGT 1 cut(s) 988
TaqI TCGA 3 cut(s) 380, 464, 870
TasI AATT 8 cut(s) 196, 223, 303, 566, 728, 1048, 1198, 1247
TatI WGTACW 1 cut(s) 873
TauI GCSGC 1 cut(s) 998
TfiI GAWTC 3 cut(s) 88, 931, 1027
Tru1I TTAA 4 cut(s) 401, 789, 891, 1109
Tru9I TTAA 4 cut(s) 401, 789, 891, 1109
TscAI CASTG 3 cut(s) 139, 661, 921
TseFI GTSAC 1 cut(s) 422
TseI GCWGC 1 cut(s) 290
Tsp45I GTSAC 1 cut(s) 422
TspDTI ATGAA 3 cut(s) 25, 511, 810
TspRI CASTG 3 cut(s) 139, 661, 921
Tth111I GACNNNGTC 1 cut(s) 107
Vha464I CTTAAG 2 cut(s) 788, 1108
VneI GTGCAC 1 cut(s) 1005
VpaK11BI GGWCC 1 cut(s) 661
XapI RAATTY 4 cut(s) 303, 566, 728, 1198
XmiI GTMKAC 2 cut(s) 111, 714
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 2 cut(s) 347, 773
ZrmI AGTACT 1 cut(s) 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.