Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003300

Physical Location & Seq

Genomic Coordinates Reverse (-)

40613878 .. 40619310

Gene Structure 5433 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1325800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGCTACACTTGGAGATTTAGGGGTTGGAGCGGGTATCAATATTCTCAGCGCGCTCATTTTCTTTCTAGTGTTTGCCTTTCTTAGGCTTCAACCCCTCAACGACAGGGTCTACTTTCCCAAATGGTATTTTAAGGGATTGAGGGAGAGTCCCACTCCTTCTGGCGCGTTTGTGCGCAAGTTTGTCAATCTGGACTTCAGGTCATACTTAAGGTTCTTGGATTGGATGCCAGCTGCGCTGAGGATGCCGGAACCAGAGCTTATTGATCATGCAGGGTTGGATTCTGCAGTTTACTTGCGGATATACTTGATAGGGCTTAAAATCTTTGTTCCTATAGCATTCCTTGCATGGGCAATTTTGGTACCAGTCAACTATACAAATATCACTTTGGATCTAGAAAAGATAAAGAATGTTACTTCAAGTGACATTGATAAGCTCTCAATTTCGAACGTCCCAGATAAATCGCCCCGATTATTTAGTCATATAGTGATGGCCTATGTCTTTACTGTTTGGACATGCTATGTGCTGCTGAAGGAGTATGAGATAGTTGCCAATATGAGGCTGCATTTTCTTGCAACAGAAGAACGCCGACCAGATCAGTATACGGTCCTTGTTCGAAATGTTCCACCAGATTCCGATGAATCTACAAGTGAGCTTGTGGAGCACTTTTTTCTTGTCAACCATCCAGATCACTATCTTACACATCAGGTGGTATATAATGCCAACTCACTTGCGAAATTGGTAAAGAAGAAGAAAAAGATGTTGAACTGGCTTGTCTACTATCAAAATAAGCTTTCTAGAAGTAAAACCGCAACAAGACCCTTAAGGAAGACTGGTTTTCTTGGGCTCTGGGGAAAAAAAGTTGACGCAATCGAACATTATAAAACTGAGATTGAGAAATTGACAGATCAAATAGCTAAAGAAAAAGAGAGGGTTGCTCATGATCCGAAGTCTATCATGCCAGCCGCCTTTGTTTCCTTTAAAACTCAATGGGGTGCCGCTGTTTGTGCACAAACTCAGCAATCCAGAAACCCAACTATTTGGTTAACCGAGTGGGCTCCAGAGCCACGTGATGTATATTGGCCAAACATGGCAGTTCCATATGTACAACTCACGGTCAAGAGGCTTATTATGGGTGTTGCATTCTTTTTTCTCACCTTCTTTTTCATGATCCCCATTGCAATCGTACAGTCTTTTGCAAGCCTCGAGGGAATTGAGAAAGCAGCTCCATTCCTAAAGCCCATTGTAGAAGCGAAATTCATTAAGTCAGTCATTGCAGGTTTCCTACCCGGAATTGCGCTGAAGTTATTTCTAATTTTTCTACCAACCATATTGATGATCATGGCAAAATTTGAGGGCTATCCATCTAAGTCTTCTCTTGAACGGAGAGCAGCATCTAGATACTATCTCTTCTCTCTGGTGAATGTATTCCTTGGGAGCATTATTACTGGAACTGCATTTGAACAGCTAGAATCTTTCATTCACCAATCAGCAACCGATATTCCAAAAACAATTGGTGTTGCTATCCCAATGAAAGCAACTTTCTTTATCACGTATATAATGGTTGATGGATGGGCCGGTATTGCTGCAGAGATTTTGATGTTGAAACCGCTGATAATATACCACTTGAAGAACTCCTTCCTGGTGAAGACTGACAAGGATAGGGAGGAGGCCATGGATCCAGGAAGTATTGGTTTCAACACTGGAGAGCCTCGTATTCAGTTATATGTCTTACTCGGCCTTGTGTATGCTACAGTTACACCAACCTTACTTCCGTTCATAATAATTTTCTTTGGCCTGGCTTATGTGGTTTTCCGTCATCAGATCATAAATGTCTACAAGCAGGAGTATGAGAGCGCCGCGGCATTCTGGCCTGATGTCCATGGTCGTATCATCACTGCATTGATCATCTCACAACTCCTCTTGTTTGGGCTGTTGAGTACAAAAAAAGCTGCTCAGTCAACGCCGTTTCTCATTGCGCTTCCAGTACTGACCTTATGGTTCCATAGGTATTGCAAAGGTCGTTTCGAACCTGCATTCAAGACCTTCCCATTACAGGAAGCAATGATGAAGGATACACTGGAACAAGCAAGAGACCCGAACTTGAATTTGAAAGGCTATCTTCAGAGCGCGTATATCCATCCGGTTTTCAAGGAGTGTGGCGACGAAGACGACAATGAATCGTTACAAAAGAGTGAAACCGAGAGCGTGATTGTGGCCACAAAACGGCAATCCCGGAGGAACACCCCAGCGCCTAGCAGAATGACAGGTGGATCCTCGCCGTCAATGCCTGATGTTGAACTTGCACAGCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005227 GO:0005261 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008324 GO:0009628 GO:0009987 GO:0010959 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0016043 GO:0022607 GO:0022803 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0032879 GO:0033554 GO:0034220 GO:0043269 GO:0043933 GO:0044085 GO:0044464 GO:0050789 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051259 GO:0051262 GO:0051716 GO:0051924 GO:0055085 GO:0065003 GO:0065007 GO:0071214 GO:0071470 GO:0071474 GO:0071840 GO:0071944 GO:0090279 GO:0098655 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

772

Amino Acids

87.67

Weight (kDa)

9.18

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	9 - 179	7e-42	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	200 - 363	5.2e-49	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	374 - 646	7.5e-84	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11960 AT1G11960 AT1G62320 AT1G62320 AT1G62320 AT1G62320 AT1G62320 AT4G04340 AT4G04340 AT4G04340 AT4G22120 AT4G22120 AT4G22120 AT4G22120 AT4G22120 AT4G22120
fragaria_vesca	FvH4_3g01530 FvH4_3g01530 FvH4_3g01530 FvH4_3g01530
malus_domestica	MD05G1351400.v1.1 MD10G1325800.v1.1
prunus_persica	Prupe.4G016200_v2.0.a1
pyrus_communis	pycom05g31850 pycom10g27550
rosa_chinensis	RchiOBHm_Chr5g0002361
rosa_laevigata	RLG00000031022 RLG00000036351
rosa_multiflora	Rmu_sc0006137.1_g000006
rosa_roxburghii	Rroxscaffold_1G00073510
rosa_rugosa	Rorug04G0395400 Rorug04G0395500
rosa_samantha	Rh5AG018300 Rh5BG021000 Rh5CG020200
rosa_wichuraiana	Rw5G001720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	882
AbsI	CCTCGAGG	1 cut(s)	1205
Acc16I	TGCGCA	1 cut(s)	176
Acc36I	ACCTGC	2 cut(s)	1268, 2041
Acc65I	GGTACC	1 cut(s)	361
AccB1I	GGYRCC	2 cut(s)	361, 995
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	4 cut(s)	111, 602, 777, 1836
AccII	CGCG	4 cut(s)	53, 167, 1862, 2132
AciI	CCGC	8 cut(s)	32, 298, 810, 966, 999, 1610, 1860, 1862
AclWI	GGATC	7 cut(s)	399, 938, 1165, 1673, 1686, 2268, 2281
AcoI	YGGCCR	2 cut(s)	1082, 2217
AcsI	RAATTY	3 cut(s)	1256, 1349, 2107
AcuI	CTGAAG	4 cut(s)	181, 551, 1322, 2108
AcvI	CACGTG	1 cut(s)	1070
AfaI	GTAC	5 cut(s)	363, 1107, 1188, 1942, 1989
AfiI	CCNNNNNNNGG	5 cut(s)	84, 349, 558, 2056, 2226
AflII	CTTAAG	2 cut(s)	208, 823
AhdI	GACNNNNNGTC	1 cut(s)	199
AjnI	CCWGG	3 cut(s)	1641, 1681, 1797
AluBI	AGCT	9 cut(s)	233, 259, 436, 655, 793, 917, 1226, 1468, 1952
AluI	AGCT	9 cut(s)	233, 259, 436, 655, 793, 917, 1226, 1468, 1952
Alw21I	GWGCWC	2 cut(s)	666, 1012
Alw26I	GTCTC	1 cut(s)	2088
Alw44I	GTGCAC	1 cut(s)	1008
AlwI	GGATC	7 cut(s)	399, 938, 1165, 1673, 1686, 2268, 2281
Ama87I	CYCGRG	1 cut(s)	1205
AoxI	GGCC	8 cut(s)	492, 1082, 1575, 1671, 1738, 1795, 1871, 2217
ApaLI	GTGCAC	1 cut(s)	1008
ApeKI	GCWGC	7 cut(s)	233, 526, 562, 1223, 1391, 1586, 1952
ApoI	RAATTY	3 cut(s)	1256, 1349, 2107
Asp700I	GAANNNNTTC	2 cut(s)	1427, 1637
Asp718I	GGTACC	1 cut(s)	361
AspS9I	GGNCC	2 cut(s)	607, 1575
AsuC2I	CCSGG	2 cut(s)	1290, 2236
AsuHPI	GGTGA	4 cut(s)	1147, 1432, 1475, 1657
AsuII	TTCGAA	3 cut(s)	446, 616, 2028
AvaI	CYCGRG	1 cut(s)	1205
AvaII	GGWCC	1 cut(s)	607
BaeGI	GKGCMC	1 cut(s)	1012
BalI	TGGCCA	2 cut(s)	1084, 2219
BamHI	GGATCC	2 cut(s)	1678, 2273
BanI	GGYRCC	2 cut(s)	361, 995
BanII	GRGCYC	2 cut(s)	849, 1060
BbrPI	CACGTG	1 cut(s)	1070
BbsI	GAAGAC	4 cut(s)	836, 1365, 1655, 2175
Bbv12I	GWGCWC	2 cut(s)	666, 1012
BbvCI	CCTCAGC	1 cut(s)	239
BbvI	GCAGC	7 cut(s)	220, 513, 549, 1235, 1403, 1573, 1939
BccI	CCATC	6 cut(s)	484, 690, 1372, 1562, 1566, 2148
BceAI	ACGGC	4 cut(s)	1951, 2243, 2266, 2296
BciT130I	CCWGG	3 cut(s)	1643, 1683, 1799
BciVI	GTATCC	1 cut(s)	2068
BclI	TGATCA	3 cut(s)	265, 1338, 1905
BcnI	CCSGG	2 cut(s)	1290, 2236
BcoDI	GTCTC	1 cut(s)	2088
BfaI	CTAG	6 cut(s)	68, 395, 798, 1398, 1469, 2256
BfmI	CTRYAG	4 cut(s)	285, 333, 1587, 1752
BfoI	RGCGCY	2 cut(s)	1860, 2255
BfrI	CTTAAG	2 cut(s)	208, 823
BfuAI	ACCTGC	2 cut(s)	1268, 2041
BfuI	GTATCC	1 cut(s)	2068
BmcAI	AGTACT	1 cut(s)	1989
Bme1390I	CCNGG	5 cut(s)	1290, 1643, 1683, 1799, 2236
Bme18I	GGWCC	1 cut(s)	607
BmeRI	GACNNNNNGTC	1 cut(s)	199
BmeT110I	CYCGRG	1 cut(s)	1205
BmgT120I	GGNCC	2 cut(s)	607, 1575
BmiI	GGNNCC	7 cut(s)	252, 363, 997, 1059, 1680, 2003, 2275
BmrFI	CCNGG	5 cut(s)	1290, 1643, 1683, 1799, 2236
BmsI	GCATC	3 cut(s)	216, 234, 1403
BpiI	GAAGAC	4 cut(s)	836, 1365, 1655, 2175
BplI	GAGNNNNNCTC	4 cut(s)	139, 171, 922, 954
BpmI	CTGGAG	2 cut(s)	1044, 1725
Bpu10I	CCTNAGC	1 cut(s)	239
Bpu14I	TTCGAA	3 cut(s)	446, 616, 2028
BpuMI	CCSGG	2 cut(s)	1290, 2236
BsaAI	YACGTR	2 cut(s)	1070, 1554
BsaBI	GATNNNNATC	1 cut(s)	693
BsaI	GGTCTC	1 cut(s)	2088
BsaJI	CCNNGG	4 cut(s)	1432, 1674, 1860, 1882
BsaWI	WCCGGW	1 cut(s)	2143
Bsc4I	CCNNNNNNNGG	5 cut(s)	84, 349, 558, 2056, 2226
Bse118I	RCCGGY	1 cut(s)	1577
Bse1I	ACTGG	7 cut(s)	365, 773, 838, 1453, 1708, 1985, 2085
Bse3DI	GCAATG	4 cut(s)	1176, 1272, 1974, 2070
Bse8I	GATNNNNATC	1 cut(s)	693
BseBI	CCWGG	3 cut(s)	1643, 1683, 1799
BseDI	CCNNGG	4 cut(s)	1432, 1674, 1860, 1882
BseGI	GGATG	5 cut(s)	231, 249, 682, 1577, 2140
BseJI	GATNNNNATC	1 cut(s)	693
BseLI	CCNNNNNNNGG	5 cut(s)	84, 349, 558, 2056, 2226
BseMI	GCAATG	4 cut(s)	1176, 1272, 1974, 2070
BseMII	CTCAG	5 cut(s)	61, 230, 879, 1031, 1970
BseNI	ACTGG	7 cut(s)	365, 773, 838, 1453, 1708, 1985, 2085
BsePI	GCGCGC	1 cut(s)	51
BseRI	GAGGAG	2 cut(s)	1682, 1910
BseSI	GKGCMC	1 cut(s)	1012
BseXI	GCAGC	7 cut(s)	220, 513, 549, 1235, 1403, 1573, 1939
BseYI	CCCAGC	1 cut(s)	2248
Bsh1236I	CGCG	4 cut(s)	53, 167, 1862, 2132
BshFI	GGCC	8 cut(s)	494, 1084, 1577, 1673, 1740, 1797, 1873, 2219
BshNI	GGYRCC	2 cut(s)	361, 995
BsiHKAI	GWGCWC	2 cut(s)	666, 1012
BsiHKCI	CYCGRG	1 cut(s)	1205
BsiSI	CCGG	5 cut(s)	248, 1290, 1578, 2144, 2236
BslFI	GGGAC	2 cut(s)	135, 437
BslI	CCNNNNNNNGG	5 cut(s)	84, 349, 558, 2056, 2226
BsmAI	GTCTC	1 cut(s)	2088
BsmFI	GGGAC	2 cut(s)	135, 437
BsmI	GAATGC	4 cut(s)	338, 1142, 1865, 2036
BsnI	GGCC	8 cut(s)	494, 1084, 1577, 1673, 1740, 1797, 1873, 2219
Bso31I	GGTCTC	1 cut(s)	2088
BsoBI	CYCGRG	1 cut(s)	1205
Bsp119I	TTCGAA	3 cut(s)	446, 616, 2028
Bsp1286I	GDGCHC	4 cut(s)	666, 849, 1012, 1060
Bsp1407I	TGTACA	1 cut(s)	1105
Bsp19I	CCATGG	2 cut(s)	1674, 1882
BspACI	CCGC	8 cut(s)	32, 298, 810, 966, 999, 1610, 1860, 1862
BspANI	GGCC	8 cut(s)	494, 1084, 1577, 1673, 1740, 1797, 1873, 2219
BspCNI	CTCAG	5 cut(s)	60, 231, 880, 1030, 1969
BspFNI	CGCG	4 cut(s)	53, 167, 1862, 2132
BspHI	TCATGA	2 cut(s)	940, 1167
BspLI	GGNNCC	7 cut(s)	252, 363, 997, 1059, 1680, 2003, 2275
BspMAI	CTGCAG	2 cut(s)	289, 1591
BspMI	ACCTGC	2 cut(s)	1268, 2041
BspPI	GGATC	7 cut(s)	399, 938, 1165, 1673, 1686, 2268, 2281
BspT104I	TTCGAA	3 cut(s)	446, 616, 2028
BspT107I	GGYRCC	2 cut(s)	361, 995
BspTI	CTTAAG	2 cut(s)	208, 823
BspTNI	GGTCTC	1 cut(s)	2088
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	4 cut(s)	1176, 1272, 1974, 2070
BsrFI	RCCGGY	1 cut(s)	1577
BsrGI	TGTACA	1 cut(s)	1105
BsrI	ACTGG	7 cut(s)	365, 773, 838, 1453, 1708, 1985, 2085
BssAI	RCCGGY	1 cut(s)	1577
BssECI	CCNNGG	4 cut(s)	1432, 1674, 1860, 1882
BssHII	GCGCGC	1 cut(s)	51
BssNAI	GTATAC	1 cut(s)	603
BssT1I	CCWWGG	3 cut(s)	1432, 1674, 1882
Bst1107I	GTATAC	1 cut(s)	603
Bst2UI	CCWGG	3 cut(s)	1643, 1683, 1799
Bst4CI	ACNGT	5 cut(s)	508, 607, 1117, 1191, 1756
Bst6I	CTCTTC	1 cut(s)	1415
BstAFI	CTTAAG	2 cut(s)	208, 823
BstAPI	GCANNNNNTGC	1 cut(s)	344
BstAUI	TGTACA	1 cut(s)	1105
BstBAI	YACGTR	2 cut(s)	1070, 1554
BstBI	TTCGAA	3 cut(s)	446, 616, 2028
BstC8I	GCNNGC	4 cut(s)	53, 231, 963, 1201
BstDEI	CTNAG	7 cut(s)	47, 83, 239, 888, 1017, 1368, 1956
BstDSI	CCRYGG	3 cut(s)	1674, 1860, 1882
BstENI	CCTNNNNNAGG	1 cut(s)	82
BstF5I	GGATG	5 cut(s)	231, 249, 682, 1577, 2140
BstFNI	CGCG	4 cut(s)	53, 167, 1862, 2132
BstH2I	RGCGCY	2 cut(s)	1860, 2255
BstMAI	GTCTC	1 cut(s)	2088
BstMWI	GCNNNNNNNGC	7 cut(s)	235, 244, 344, 661, 1007, 1583, 2287
BstNI	CCWGG	3 cut(s)	1643, 1683, 1799
BstNSI	RCATGY	1 cut(s)	519
BstSCI	CCNGG	5 cut(s)	1288, 1641, 1681, 1797, 2234
BstSFI	CTRYAG	4 cut(s)	285, 333, 1587, 1752
BstSLI	GKGCMC	1 cut(s)	1012
BstUI	CGCG	4 cut(s)	53, 167, 1862, 2132
BstV1I	GCAGC	7 cut(s)	220, 513, 549, 1235, 1403, 1573, 1939
BstV2I	GAAGAC	4 cut(s)	836, 1365, 1655, 2175
BstX2I	RGATCY	3 cut(s)	391, 1678, 2273
BstXI	CCANNNNNNTGG	1 cut(s)	1041
BstYI	RGATCY	3 cut(s)	391, 1678, 2273
BstZ17I	GTATAC	1 cut(s)	603
BsuI	GTATCC	1 cut(s)	2068
BsuRI	GGCC	8 cut(s)	494, 1084, 1577, 1673, 1740, 1797, 1873, 2219
BtgI	CCRYGG	3 cut(s)	1674, 1860, 1882
BtsCI	GGATG	5 cut(s)	231, 249, 682, 1577, 2140
BtsI	GCAGTG	1 cut(s)	1896
BtsIMutI	CAGTG	3 cut(s)	1701, 1896, 2078
BveI	ACCTGC	2 cut(s)	1268, 2041
Cac8I	GCNNGC	4 cut(s)	53, 231, 963, 1201
CciI	TCATGA	2 cut(s)	940, 1167
Cfr10I	RCCGGY	1 cut(s)	1577
Cfr13I	GGNCC	2 cut(s)	607, 1575
Cfr42I	CCGCGG	1 cut(s)	1863
CseI	GACGC	1 cut(s)	875
Csp6I	GTAC	5 cut(s)	362, 1106, 1187, 1941, 1988
CspCI	CAANNNNNGTGG	2 cut(s)	2140, 2175
CviQI	GTAC	5 cut(s)	362, 1106, 1187, 1941, 1988
DdeI	CTNAG	7 cut(s)	47, 83, 239, 888, 1017, 1368, 1956
DraI	TTTAAA	1 cut(s)	982
DriI	GACNNNNNGTC	1 cut(s)	199
EaeI	YGGCCR	2 cut(s)	1082, 2217
Eam1104I	CTCTTC	1 cut(s)	1415
Eam1105I	GACNNNNNGTC	1 cut(s)	199
EarI	CTCTTC	1 cut(s)	1415
Eco130I	CCWWGG	3 cut(s)	1432, 1674, 1882
Eco24I	GRGCYC	2 cut(s)	849, 1060
Eco31I	GGTCTC	1 cut(s)	2088
Eco47I	GGWCC	1 cut(s)	607
Eco57I	CTGAAG	4 cut(s)	181, 551, 1322, 2108
Eco72I	CACGTG	1 cut(s)	1070
Eco88I	CYCGRG	1 cut(s)	1205
EcoNI	CCTNNNNNAGG	1 cut(s)	82
EcoRII	CCWGG	3 cut(s)	1641, 1681, 1797
EcoT14I	CCWWGG	3 cut(s)	1432, 1674, 1882
EcoT38I	GRGCYC	2 cut(s)	849, 1060
ErhI	CCWWGG	3 cut(s)	1432, 1674, 1882
FalI	AAGNNNNNCTT	4 cut(s)	1622, 1654, 2106, 2138
FaqI	GGGAC	2 cut(s)	135, 437
FauI	CCCGC	1 cut(s)	25
FauNDI	CATATG	1 cut(s)	1102
FbaI	TGATCA	3 cut(s)	265, 1338, 1905
FblI	GTMKAC	4 cut(s)	111, 602, 777, 1836
FokI	GGATG	5 cut(s)	238, 256, 669, 1584, 2127
FriOI	GRGCYC	2 cut(s)	849, 1060
FspBI	CTAG	6 cut(s)	68, 395, 798, 1398, 1469, 2256
FspI	TGCGCA	1 cut(s)	176
GsaI	CCCAGC	1 cut(s)	2252
GsuI	CTGGAG	2 cut(s)	1044, 1725
HaeII	RGCGCY	2 cut(s)	1860, 2255
HaeIII	GGCC	8 cut(s)	494, 1084, 1577, 1673, 1740, 1797, 1873, 2219
HapII	CCGG	5 cut(s)	248, 1290, 1578, 2144, 2236
HgaI	GACGC	1 cut(s)	875
HincII	GTYRAC	5 cut(s)	370, 679, 865, 1047, 1962
HindII	GTYRAC	5 cut(s)	370, 679, 865, 1047, 1962
HindIII	AAGCTT	1 cut(s)	791
HinfI	GANTC	6 cut(s)	148, 281, 632, 641, 1472, 2180
HpaI	GTTAAC	1 cut(s)	1047
HpaII	CCGG	5 cut(s)	248, 1290, 1578, 2144, 2236
HphI	GGTGA	4 cut(s)	1147, 1432, 1475, 1657
Hpy188I	TCNGA	4 cut(s)	637, 948, 1824, 2127
Hpy99I	CGWCG	1 cut(s)	2168
HpyAV	CCTTC	6 cut(s)	168, 526, 1168, 1648, 2056, 2065
HpyCH4III	ACNGT	5 cut(s)	508, 607, 1117, 1191, 1756
HpyCH4IV	ACGT	3 cut(s)	450, 1069, 1553
HpyF10VI	GCNNNNNNNGC	7 cut(s)	235, 244, 344, 661, 1007, 1583, 2287
HpyF3I	CTNAG	7 cut(s)	47, 83, 239, 888, 1017, 1368, 1956
HpySE526I	ACGT	3 cut(s)	450, 1069, 1553
KpnI	GGTACC	1 cut(s)	365
Ksp22I	TGATCA	3 cut(s)	265, 1338, 1905
KspAI	GTTAAC	1 cut(s)	1047
KspI	CCGCGG	1 cut(s)	1863
LmnI	GCTCC	5 cut(s)	29, 661, 1063, 1231, 1437
Lsp1109I	GCAGC	7 cut(s)	220, 513, 549, 1235, 1403, 1573, 1939
LweI	GCATC	3 cut(s)	216, 234, 1403
MaeI	CTAG	6 cut(s)	68, 395, 798, 1398, 1469, 2256
MaeII	ACGT	3 cut(s)	450, 1069, 1553
MaeIII	GTNAC	4 cut(s)	412, 422, 1756, 2184
MbiI	CCGCTC	1 cut(s)	32
MfeI	CAATTG	1 cut(s)	1512
MflI	RGATCY	3 cut(s)	391, 1678, 2273
MhlI	GDGCHC	4 cut(s)	666, 849, 1012, 1060
MlsI	TGGCCA	2 cut(s)	1084, 2219
MluNI	TGGCCA	2 cut(s)	1084, 2219
MlyI	GAGTC	1 cut(s)	157
MmeI	TCCRAC	2 cut(s)	7, 258
Mox20I	TGGCCA	2 cut(s)	1084, 2219
MroXI	GAANNNNTTC	2 cut(s)	1427, 1637
MscI	TGGCCA	2 cut(s)	1084, 2219
MseI	TTAA	7 cut(s)	132, 209, 318, 824, 981, 1046, 1263
MslI	CAYNNNNRTG	1 cut(s)	1334
Msp20I	TGGCCA	2 cut(s)	1084, 2219
MspA1I	CMGCKG	4 cut(s)	233, 1001, 1612, 1862
MspCI	CTTAAG	2 cut(s)	208, 823
MspI	CCGG	5 cut(s)	248, 1290, 1578, 2144, 2236
MspR9I	CCNGG	5 cut(s)	1290, 1643, 1683, 1799, 2236
MunI	CAATTG	1 cut(s)	1512
Mva1269I	GAATGC	4 cut(s)	338, 1142, 1865, 2036
MvaI	CCWGG	3 cut(s)	1643, 1683, 1799
MvnI	CGCG	4 cut(s)	53, 167, 1862, 2132
MwoI	GCNNNNNNNGC	7 cut(s)	235, 244, 344, 661, 1007, 1583, 2287
NciI	CCSGG	2 cut(s)	1290, 2236
NcoI	CCATGG	2 cut(s)	1674, 1882
NdeI	CATATG	1 cut(s)	1102
NlaIV	GGNNCC	7 cut(s)	252, 363, 997, 1059, 1680, 2003, 2275
NmeAIII	GCCGAG	1 cut(s)	1716
NmuCI	GTSAC	1 cut(s)	422
NsbI	TGCGCA	1 cut(s)	176
NspI	RCATGY	1 cut(s)	519
NspV	TTCGAA	3 cut(s)	446, 616, 2028
PaeR7I	CTCGAG	1 cut(s)	1205
PagI	TCATGA	2 cut(s)	940, 1167
PauI	GCGCGC	1 cut(s)	51
PctI	GAATGC	4 cut(s)	338, 1142, 1865, 2036
PdmI	GAANNNNTTC	2 cut(s)	1427, 1637
PfeI	GAWTC	5 cut(s)	281, 632, 641, 1472, 2180
PflFI	GACNNNGTC	1 cut(s)	107
PfoI	TCCNGGA	2 cut(s)	1681, 2234
PleI	GAGTC	1 cut(s)	156
PmaCI	CACGTG	1 cut(s)	1070
PmlI	CACGTG	1 cut(s)	1070
PpsI	GAGTC	1 cut(s)	156
Ppu21I	YACGTR	2 cut(s)	1070, 1554
PsiI	TTATAA	1 cut(s)	882
Psp6I	CCWGG	3 cut(s)	1641, 1681, 1797
PspCI	CACGTG	1 cut(s)	1070
PspFI	CCCAGC	1 cut(s)	2248
PspGI	CCWGG	3 cut(s)	1641, 1681, 1797
PspN4I	GGNNCC	7 cut(s)	252, 363, 997, 1059, 1680, 2003, 2275
PspPI	GGNCC	2 cut(s)	607, 1575
PspXI	VCTCGAGB	1 cut(s)	1205
PstI	CTGCAG	2 cut(s)	289, 1591
PsuI	RGATCY	3 cut(s)	391, 1678, 2273
PsyI	GACNNNGTC	1 cut(s)	107
PteI	GCGCGC	1 cut(s)	51
PvuII	CAGCTG	1 cut(s)	233
RsaI	GTAC	5 cut(s)	363, 1107, 1188, 1942, 1989
RsaNI	GTAC	5 cut(s)	362, 1106, 1187, 1941, 1988
RseI	CAYNNNNRTG	1 cut(s)	1334
SacII	CCGCGG	1 cut(s)	1863
SaqAI	TTAA	7 cut(s)	132, 209, 318, 824, 981, 1046, 1263
Sau96I	GGNCC	2 cut(s)	607, 1575
ScaI	AGTACT	1 cut(s)	1989
SchI	GAGTC	1 cut(s)	157
ScrFI	CCNGG	5 cut(s)	1290, 1643, 1683, 1799, 2236
SduI	GDGCHC	4 cut(s)	666, 849, 1012, 1060
SfaNI	GCATC	3 cut(s)	216, 234, 1403
SfcI	CTRYAG	4 cut(s)	285, 333, 1587, 1752
Sfr274I	CTCGAG	1 cut(s)	1205
Sfr303I	CCGCGG	1 cut(s)	1863
SfuI	TTCGAA	3 cut(s)	446, 616, 2028
SgrBI	CCGCGG	1 cut(s)	1863
SinI	GGWCC	1 cut(s)	607
SlaI	CTCGAG	1 cut(s)	1205
SmiMI	CAYNNNNRTG	1 cut(s)	1334
SmlI	CTYRAG	3 cut(s)	208, 823, 1205
SmoI	CTYRAG	3 cut(s)	208, 823, 1205
SsiI	CCGC	8 cut(s)	32, 298, 810, 966, 999, 1610, 1860, 1862
SspI	AATATT	1 cut(s)	43
SspMI	CTAG	6 cut(s)	68, 395, 798, 1398, 1469, 2256
StyD4I	CCNGG	5 cut(s)	1288, 1641, 1681, 1797, 2234
StyI	CCWWGG	3 cut(s)	1432, 1674, 1882
TaaI	ACNGT	5 cut(s)	508, 607, 1117, 1191, 1756
TaiI	ACGT	3 cut(s)	453, 1072, 1556
TaqI	TCGA	5 cut(s)	446, 616, 873, 1206, 2028
TatI	WGTACW	3 cut(s)	1105, 1940, 1987
TauI	GCSGC	4 cut(s)	968, 1001, 1862, 1865
TfiI	GAWTC	5 cut(s)	281, 632, 641, 1472, 2180
Tru1I	TTAA	7 cut(s)	132, 209, 318, 824, 981, 1046, 1263
Tru9I	TTAA	7 cut(s)	132, 209, 318, 824, 981, 1046, 1263
TscAI	CASTG	3 cut(s)	1708, 1903, 2085
TseFI	GTSAC	1 cut(s)	422
TseI	GCWGC	7 cut(s)	233, 526, 562, 1223, 1391, 1586, 1952
Tsp45I	GTSAC	1 cut(s)	422
TspDTI	ATGAA	8 cut(s)	654, 1156, 1249, 1468, 1547, 1768, 2084, 2193
TspGWI	ACGGA	3 cut(s)	1399, 1764, 1805
TspRI	CASTG	3 cut(s)	1708, 1903, 2085
Tth111I	GACNNNGTC	1 cut(s)	107
Vha464I	CTTAAG	2 cut(s)	208, 823
VneI	GTGCAC	1 cut(s)	1008
VpaK11BI	GGWCC	1 cut(s)	607
XagI	CCTNNNNNAGG	1 cut(s)	82
XapI	RAATTY	3 cut(s)	1256, 1349, 2107
XbaI	TCTAGA	3 cut(s)	394, 797, 1397
XceI	RCATGY	1 cut(s)	519
XhoI	CTCGAG	1 cut(s)	1205
XmiI	GTMKAC	4 cut(s)	111, 602, 777, 1836
XmnI	GAANNNNTTC	2 cut(s)	1427, 1637
XspI	CTAG	6 cut(s)	68, 395, 798, 1398, 1469, 2256
ZrmI	AGTACT	1 cut(s)	1989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.