Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003300

Physical Location & Seq

Genomic Coordinates Forward (+)

1490108 .. 1496148

Gene Structure 6041 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G001720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGCTACACTCGGGGATATAGGGGTTGGAGCAGCCATCAATATTCTGAGTGCCTTTGTTTTCTTTCTAGTATTTGCGTTTCTTAGGCTTCAGCCGTTCAACGACAGGGTGTACTTTCCAAAATGGTATTTCAAGGGAGTAAGAGACAGTCCCACACGCTCTGGCACATTCGTGAGTAAATTTGTCAATCTAGACTATAGGTCATATGTGAGGTTTCTAAATTGGATGCCAGAAGCATTGAGGATGCCGGAACCCGAGCTTATTGATCATGCAGGATTGGATTCTGCTGTTTACTTGAGGATATACTTGATAGGGCTTAAAATCTTTGTTCCAATGGCATTCGTTGCATGGGCTATTTTGGTACCAGTCAACTGGACAAATAACACTTTGAATATTGCCGCTCATTTAAAGAATGTCACTTCTAGTGACATTGATAGGCTCTCTATATCAAATATCCCAGAAAAATCTCAAAGATTGTGGACTCATATAGTGGTGGCGTATGCCTTTACCTTTTGGACATGTTTTGTGCTAATGAAGGAGTATGAGAAAGTTGCCTCAATGCGGTTGCATTTTCTTGCAACAGAAAAACGACGACCAGATCAATTTACGGCCCTTGTCAGAAATGTTCCACCAGATCCAGATGAATCTGTAAGTGAGCTTGTGGAGCACTTTTTTCTGGTCAACCATCCGGATCATTATCTTACTCATCAGGTGGTGTGCAATGCCAACAAACTTGCAAAATTGGTAAAGAAGAAGAAAAAAATGGATAACTGGCTTGTCTACTACGAAAACAAACGTGAAAGAAGCAAAACTTCAGTAAGGCCCTTGGTTAAGACTGGTTTTCTTGGGCTTTGGGGAAAGAAAGTTGATGCAATTGAACATTATCAATCTGAGATTGACAAATTGAAGAAGGAAATACCTGAAGAAAGGGAGAGAGTTTCAAACGATCCCAACTCTGTCGTGGCAGCTGCCTTTGTTTCCTTTAAAAGCAGATGGGGTGCTGCTGTTTGTGCACAAACTCAGCAATCTAGAAATCCAACTATTTGGTTAACCGAATGGGCTCCAGAGCCACGCGATGTATATTGGCCAAATCTGGCTATTCCATATGTAAAACTCACAGTTAAGAGGCTCATCATGGCTGTTGCATTCTTTTTCCTCACTTTCTTTTTCATGATCCCCATTGCATTTGTACAATCTCTTGCAAGCCTGGAGGGACTTGAAAAAGTAGCTCCATTCCTAAAGCCCATTGTTGAAGTGAAGTTCATTAAGTCAGTCATTACAGGCTTTCTACCTGGGATCGCACTGAAGTTGTTTCTGATATTTTTGCCAACCATATTGATGATCATGGCTAAATTTGAGGGGTATACATCTCTGTCTTCTCTTGAGAGGAGAGCAGCATCTAGATACTATCTCTTCACTTTGGTGAATGTATTCCTTGGTAGCATTATAGCTGGATCGGCACTTGAACAGCTAAAATCTTTCATACACCAATCACCATCTGACATTCCAGTGACACTTGGCACTGCAGTCCCATTAAAAGCAACTTTCTTCATAACATATATAATGGTTGATGGGTGGGCTGGTATCGCTGCAGAGATCTTGATGTTGAAACCGCTCATTATATATCACTTGAAGAATACCTTCCTGGTAAAGACTGATAAGGACAGGGAGGAGGCAATGGATCCAGGAAGTATTGGTTTCAACACTGGGGAGCCTCGTATACAGCTTTATATCTTACTGGGCCTTGTATATGCTACAGTGACACCAGTTTTACTTCCATTCATAATTGTTTTCTTTGGCCTGGCTTATGTTGTGTTCCGTCATCAGATCATAAATGTTTACATCCAGGAATATGAAAGTGCTGCAGCATACTGGCCTGATGTCCATGGTCGCATTCTGTCTGCATTGCTTATCTCTCAACTGGTTCTATTGGGATTGTTGAGTACCAAAAAAGCTGCTCAGTCTACACCATTTCTTCTTGCACTTCCAGTATTGACCATAGCGTTCTATAAGTATTGCCAAGGTCGTTTTGAACCTGCATTTGTTAGATATCCATTACAGGAAGCAAGGATGAAAGATACTCTGGAACAAGTAAGAGAACCAAACTTGAACTTGAAAGGCTACCTCCAAAGCGCATATGTCCATCCAGTTTTTAAAGAGTGTGATGAAGATGACGATGATGATGACCATTACTCGTTTGAAAAGTACGAAAATGAGAGCGTGACGACTGTGGCCACAAAACGCCAATCCCGGCGGAACACCCCGGTGCCTAGCAGAATGACTGGTGGATCCACGCCCTCGTTGCCAGAAGCTGTTGAAGATCTACAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005227 GO:0005261 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008324 GO:0009628 GO:0009987 GO:0010959 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0016043 GO:0022607 GO:0022803 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0032879 GO:0033554 GO:0034220 GO:0043269 GO:0043933 GO:0044085 GO:0044464 GO:0050789 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051259 GO:0051262 GO:0051716 GO:0051924 GO:0055085 GO:0065003 GO:0065007 GO:0071214 GO:0071470 GO:0071474 GO:0071840 GO:0071944 GO:0090279 GO:0098655 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

777

Amino Acids

88.66

Weight (kDa)

8.96

Isoelectric Point (pI)

43.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	9 - 180	1.4e-42	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	201 - 364	1.1e-46	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	375 - 647	9.7e-83	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11960 AT1G11960 AT1G62320 AT1G62320 AT1G62320 AT1G62320 AT1G62320 AT4G04340 AT4G04340 AT4G04340 AT4G22120 AT4G22120 AT4G22120 AT4G22120 AT4G22120 AT4G22120
fragaria_vesca	FvH4_3g01530 FvH4_3g01530 FvH4_3g01530 FvH4_3g01530
malus_domestica	MD05G1351400.v1.1 MD10G1325800.v1.1
prunus_persica	Prupe.4G016200_v2.0.a1
pyrus_communis	pycom05g31850 pycom10g27550
rosa_chinensis	RchiOBHm_Chr5g0002361
rosa_laevigata	RLG00000031022 RLG00000036351
rosa_multiflora	Rmu_sc0006137.1_g000006
rosa_roxburghii	Rroxscaffold_1G00073510
rosa_rugosa	Rorug04G0395400 Rorug04G0395500
rosa_samantha	Rh5AG018300 Rh5BG021000 Rh5CG020200
rosa_wichuraiana	Rw5G001720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2044
Acc65I	GGTACC	1 cut(s)	361
AccB1I	GGYRCC	2 cut(s)	361, 2266
AccBSI	CCGCTC	2 cut(s)	401, 1615
AccI	GTMKAC	4 cut(s)	780, 1364, 1720, 1964
AccII	CGCG	1 cut(s)	1074
AccIII	TCCGGA	1 cut(s)	688
AciI	CCGC	4 cut(s)	399, 562, 1613, 2254
AcoI	YGGCCR	2 cut(s)	1085, 2232
AcsI	RAATTY	2 cut(s)	179, 1352
AcuI	CTGAAG	4 cut(s)	74, 798, 942, 1325
AfaI	GTAC	5 cut(s)	113, 363, 1191, 1945, 2207
AfiI	CCNNNNNNNGG	1 cut(s)	561
AflIII	ACRYGT	1 cut(s)	518
AhdI	GACNNNNNGTC	1 cut(s)	199
AjnI	CCWGG	6 cut(s)	1206, 1291, 1644, 1684, 1800, 1845
AleI	CACNNNNGTG	3 cut(s)	170, 1421, 2264
AluBI	AGCT	9 cut(s)	259, 658, 968, 1229, 1451, 1471, 1726, 1955, 2312
AluI	AGCT	9 cut(s)	259, 658, 968, 1229, 1451, 1471, 1726, 1955, 2312
Alw21I	GWGCWC	2 cut(s)	669, 1015
Alw26I	GTCTC	1 cut(s)	138
Alw44I	GTGCAC	1 cut(s)	1011
AlwNI	CAGNNNCTG	1 cut(s)	2312
Ama87I	CYCGRG	2 cut(s)	11, 254
Aor13HI	TCCGGA	1 cut(s)	688
AoxI	GGCC	7 cut(s)	609, 821, 1085, 1741, 1798, 1874, 2232
ApaLI	GTGCAC	1 cut(s)	1011
ApeKI	GCWGC	9 cut(s)	32, 965, 968, 1001, 1394, 1589, 1862, 1865, 1955
ApoI	RAATTY	2 cut(s)	179, 1352
Asp700I	GAANNNNTTC	2 cut(s)	1430, 1640
Asp718I	GGTACC	1 cut(s)	361
AspLEI	GCGC	1 cut(s)	2135
AspS9I	GGNCC	3 cut(s)	610, 822, 1741
AsuC2I	CCSGG	2 cut(s)	2251, 2264
AsuHPI	GGTGA	2 cut(s)	1435, 1485
AvaI	CYCGRG	2 cut(s)	11, 254
BaeGI	GKGCMC	1 cut(s)	1015
BalI	TGGCCA	2 cut(s)	1087, 2234
BamHI	GGATCC	2 cut(s)	1681, 2288
BanI	GGYRCC	2 cut(s)	361, 2266
BanII	GRGCYC	1 cut(s)	1063
BbsI	GAAGAC	1 cut(s)	1368
Bbv12I	GWGCWC	2 cut(s)	669, 1015
BbvI	GCAGC	9 cut(s)	44, 955, 977, 988, 1406, 1576, 1849, 1877, 1942
BccI	CCATC	6 cut(s)	44, 693, 987, 1504, 1565, 2151
BceAI	ACGGC	2 cut(s)	79, 624
BciT130I	CCWGG	6 cut(s)	1208, 1293, 1646, 1686, 1802, 1847
BclI	TGATCA	2 cut(s)	265, 1341
BcnI	CCSGG	2 cut(s)	2251, 2264
BcoDI	GTCTC	1 cut(s)	138
BfaI	CTAG	6 cut(s)	68, 191, 423, 1029, 1401, 2271
BfmI	CTRYAG	6 cut(s)	196, 1524, 1590, 1755, 1863, 2324
BfuAI	ACCTGC	1 cut(s)	2044
BglII	AGATCT	2 cut(s)	1596, 2320
Bme1390I	CCNGG	8 cut(s)	1208, 1293, 1646, 1686, 1802, 1847, 2251, 2264
BmeRI	GACNNNNNGTC	1 cut(s)	199
BmeT110I	CYCGRG	2 cut(s)	11, 254
BmgT120I	GGNCC	3 cut(s)	610, 822, 1741
BmiI	GGNNCC	7 cut(s)	252, 363, 1062, 1683, 1713, 2268, 2290
BmrFI	CCNGG	8 cut(s)	1208, 1293, 1646, 1686, 1802, 1847, 2251, 2264
BmrI	ACTGGG	2 cut(s)	1716, 1748
BmsI	GCATC	4 cut(s)	216, 234, 859, 1406
BmuI	ACTGGG	2 cut(s)	1716, 1748
BpiI	GAAGAC	1 cut(s)	1368
BpmI	CTGGAG	2 cut(s)	1047, 1229
BpuEI	CTTGAG	2 cut(s)	316, 1403
BpuMI	CCSGG	2 cut(s)	2251, 2264
BsaBI	GATNNNNATC	1 cut(s)	696
BsaJI	CCNNGG	6 cut(s)	825, 1292, 1435, 1885, 2020, 2262
BsaWI	WCCGGW	1 cut(s)	688
Bsc4I	CCNNNNNNNGG	1 cut(s)	561
Bse3DI	GCAATG	4 cut(s)	727, 1179, 1683, 1904
Bse8I	GATNNNNATC	1 cut(s)	696
BseAI	TCCGGA	1 cut(s)	688
BseBI	CCWGG	6 cut(s)	1208, 1293, 1646, 1686, 1802, 1847
BseDI	CCNNGG	6 cut(s)	825, 1292, 1435, 1885, 2020, 2262
BseGI	GGATG	6 cut(s)	231, 249, 685, 1842, 2076, 2143
BseJI	GATNNNNATC	1 cut(s)	696
BseLI	CCNNNNNNNGG	1 cut(s)	561
BseMI	GCAATG	4 cut(s)	727, 1179, 1683, 1904
BseMII	CTCAG	4 cut(s)	38, 882, 1034, 1973
BseRI	GAGGAG	2 cut(s)	1402, 1685
BseSI	GKGCMC	1 cut(s)	1015
BseXI	GCAGC	9 cut(s)	44, 955, 977, 988, 1406, 1576, 1849, 1877, 1942
Bsh1236I	CGCG	1 cut(s)	1074
BshFI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2234
BshNI	GGYRCC	2 cut(s)	361, 2266
BsiHKAI	GWGCWC	2 cut(s)	669, 1015
BsiHKCI	CYCGRG	2 cut(s)	11, 254
BsiSI	CCGG	4 cut(s)	248, 689, 2251, 2264
BslFI	GGGAC	3 cut(s)	135, 1227, 1514
BslI	CCNNNNNNNGG	1 cut(s)	561
BsmAI	GTCTC	1 cut(s)	138
BsmFI	GGGAC	3 cut(s)	135, 1227, 1514
BsmI	GAATGC	3 cut(s)	338, 1145, 1893
BsnI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2234
BsoBI	CYCGRG	2 cut(s)	11, 254
Bsp1286I	GDGCHC	3 cut(s)	669, 1015, 1063
Bsp13I	TCCGGA	1 cut(s)	688
Bsp1407I	TGTACA	1 cut(s)	1189
Bsp19I	CCATGG	1 cut(s)	1885
BspACI	CCGC	4 cut(s)	399, 562, 1613, 2254
BspANI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2234
BspCNI	CTCAG	4 cut(s)	39, 883, 1033, 1972
BspEI	TCCGGA	1 cut(s)	688
BspFNI	CGCG	1 cut(s)	1074
BspHI	TCATGA	1 cut(s)	1170
BspLI	GGNNCC	7 cut(s)	252, 363, 1062, 1683, 1713, 2268, 2290
BspMAI	CTGCAG	3 cut(s)	1528, 1594, 1867
BspMI	ACCTGC	1 cut(s)	2044
BspT107I	GGYRCC	2 cut(s)	361, 2266
BsrBI	CCGCTC	2 cut(s)	401, 1615
BsrDI	GCAATG	4 cut(s)	727, 1179, 1683, 1904
BsrGI	TGTACA	1 cut(s)	1189
BssECI	CCNNGG	6 cut(s)	825, 1292, 1435, 1885, 2020, 2262
BssNAI	GTATAC	2 cut(s)	1365, 1721
BssT1I	CCWWGG	4 cut(s)	825, 1435, 1885, 2020
Bst1107I	GTATAC	2 cut(s)	1365, 1721
Bst2UI	CCWGG	6 cut(s)	1208, 1293, 1646, 1686, 1802, 1847
Bst4CI	ACNGT	4 cut(s)	149, 1120, 1759, 2230
Bst6I	CTCTTC	1 cut(s)	1418
BstAPI	GCANNNNNTGC	1 cut(s)	344
BstAUI	TGTACA	1 cut(s)	1189
BstC8I	GCNNGC	1 cut(s)	1204
BstDEI	CTNAG	5 cut(s)	47, 83, 891, 1020, 1959
BstDSI	CCRYGG	1 cut(s)	1885
BstF5I	GGATG	6 cut(s)	231, 249, 685, 1842, 2076, 2143
BstFNI	CGCG	1 cut(s)	1074
BstHHI	GCGC	1 cut(s)	2135
BstMAI	GTCTC	1 cut(s)	138
BstMWI	GCNNNNNNNGC	6 cut(s)	344, 664, 1010, 1457, 1586, 2302
BstNI	CCWGG	6 cut(s)	1208, 1293, 1646, 1686, 1802, 1847
BstNSI	RCATGY	1 cut(s)	522
BstSCI	CCNGG	8 cut(s)	1206, 1291, 1644, 1684, 1800, 1845, 2249, 2262
BstSFI	CTRYAG	6 cut(s)	196, 1524, 1590, 1755, 1863, 2324
BstSLI	GKGCMC	1 cut(s)	1015
BstUI	CGCG	1 cut(s)	1074
BstV1I	GCAGC	9 cut(s)	44, 955, 977, 988, 1406, 1576, 1849, 1877, 1942
BstV2I	GAAGAC	1 cut(s)	1368
BstX2I	RGATCY	5 cut(s)	634, 1596, 1681, 2288, 2320
BstXI	CCANNNNNNTGG	2 cut(s)	372, 1044
BstYI	RGATCY	5 cut(s)	634, 1596, 1681, 2288, 2320
BstZ17I	GTATAC	2 cut(s)	1365, 1721
BsuRI	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2234
BtgI	CCRYGG	1 cut(s)	1885
BtgZI	GCGATG	1 cut(s)	1089
BtsCI	GGATG	6 cut(s)	231, 249, 685, 1842, 2076, 2143
BtsI	GCAGTG	1 cut(s)	1521
BtsIMutI	CAGTG	5 cut(s)	1301, 1515, 1521, 1704, 1764
BveI	ACCTGC	1 cut(s)	2044
Cac8I	GCNNGC	1 cut(s)	1204
CaiI	CAGNNNCTG	1 cut(s)	2312
CciI	TCATGA	1 cut(s)	1170
CfoI	GCGC	1 cut(s)	2135
Cfr13I	GGNCC	3 cut(s)	610, 822, 1741
Csp6I	GTAC	5 cut(s)	112, 362, 1190, 1944, 2206
CspCI	CAANNNNNGTGG	2 cut(s)	458, 493
CviAII	CATG	7 cut(s)	269, 348, 519, 1135, 1171, 1345, 1886
CviQI	GTAC	5 cut(s)	112, 362, 1190, 1944, 2206
DdeI	CTNAG	5 cut(s)	47, 83, 891, 1020, 1959
DraI	TTTAAA	3 cut(s)	408, 985, 2155
DriI	GACNNNNNGTC	1 cut(s)	199
EaeI	YGGCCR	2 cut(s)	1085, 2232
Eam1104I	CTCTTC	1 cut(s)	1418
Eam1105I	GACNNNNNGTC	1 cut(s)	199
EarI	CTCTTC	1 cut(s)	1418
EciI	GGCGGA	1 cut(s)	2269
Eco130I	CCWWGG	4 cut(s)	825, 1435, 1885, 2020
Eco24I	GRGCYC	1 cut(s)	1063
Eco32I	GATATC	1 cut(s)	2051
Eco57I	CTGAAG	4 cut(s)	74, 798, 942, 1325
Eco88I	CYCGRG	2 cut(s)	11, 254
EcoO109I	RGGNCCY	1 cut(s)	822
EcoRII	CCWGG	6 cut(s)	1206, 1291, 1644, 1684, 1800, 1845
EcoRV	GATATC	1 cut(s)	2051
EcoT14I	CCWWGG	4 cut(s)	825, 1435, 1885, 2020
EcoT38I	GRGCYC	1 cut(s)	1063
ErhI	CCWWGG	4 cut(s)	825, 1435, 1885, 2020
FaeI	CATG	7 cut(s)	272, 351, 522, 1138, 1174, 1348, 1889
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 1625, 1657
FaqI	GGGAC	3 cut(s)	135, 1227, 1514
FatI	CATG	7 cut(s)	268, 347, 518, 1134, 1170, 1344, 1885
FauNDI	CATATG	3 cut(s)	205, 1105, 2137
FbaI	TGATCA	2 cut(s)	265, 1341
FblI	GTMKAC	4 cut(s)	780, 1364, 1720, 1964
FokI	GGATG	6 cut(s)	238, 256, 672, 1829, 2083, 2130
FriOI	GRGCYC	1 cut(s)	1063
FspBI	CTAG	6 cut(s)	68, 191, 423, 1029, 1401, 2271
GlaI	GCGC	1 cut(s)	2134
GsuI	CTGGAG	2 cut(s)	1047, 1229
HaeIII	GGCC	7 cut(s)	611, 823, 1087, 1743, 1800, 1876, 2234
HapII	CCGG	4 cut(s)	248, 689, 2251, 2264
HhaI	GCGC	1 cut(s)	2135
Hin1II	CATG	7 cut(s)	272, 351, 522, 1138, 1174, 1348, 1889
Hin6I	GCGC	1 cut(s)	2133
HinP1I	GCGC	1 cut(s)	2133
HincII	GTYRAC	3 cut(s)	370, 682, 1050
HindII	GTYRAC	3 cut(s)	370, 682, 1050
HinfI	GANTC	3 cut(s)	281, 481, 644
HpaI	GTTAAC	1 cut(s)	1050
HpaII	CCGG	4 cut(s)	248, 689, 2251, 2264
HphI	GGTGA	2 cut(s)	1435, 1485
Hpy188I	TCNGA	6 cut(s)	48, 620, 892, 1317, 1501, 1827
Hpy99I	CGWCG	1 cut(s)	594
HpyAV	CCTTC	3 cut(s)	529, 904, 1651
HpyCH4III	ACNGT	4 cut(s)	149, 1120, 1759, 2230
HpyCH4IV	ACGT	1 cut(s)	796
HpyF10VI	GCNNNNNNNGC	6 cut(s)	344, 664, 1010, 1457, 1586, 2302
HpyF3I	CTNAG	5 cut(s)	47, 83, 891, 1020, 1959
HpySE526I	ACGT	1 cut(s)	796
Hsp92II	CATG	7 cut(s)	272, 351, 522, 1138, 1174, 1348, 1889
HspAI	GCGC	1 cut(s)	2133
Kpn2I	TCCGGA	1 cut(s)	688
KpnI	GGTACC	1 cut(s)	365
Ksp22I	TGATCA	2 cut(s)	265, 1341
KspAI	GTTAAC	1 cut(s)	1050
LmnI	GCTCC	5 cut(s)	29, 664, 1066, 1234, 1711
Lsp1109I	GCAGC	9 cut(s)	44, 955, 977, 988, 1406, 1576, 1849, 1877, 1942
LweI	GCATC	4 cut(s)	216, 234, 859, 1406
MaeI	CTAG	6 cut(s)	68, 191, 423, 1029, 1401, 2271
MaeII	ACGT	1 cut(s)	796
MaeIII	GTNAC	5 cut(s)	415, 425, 1510, 1759, 2221
MbiI	CCGCTC	2 cut(s)	401, 1615
MfeI	CAATTG	1 cut(s)	873
MflI	RGATCY	5 cut(s)	634, 1596, 1681, 2288, 2320
MhlI	GDGCHC	3 cut(s)	669, 1015, 1063
MlsI	TGGCCA	2 cut(s)	1087, 2234
MluCI	AATT	8 cut(s)	179, 220, 602, 740, 873, 902, 1352, 1785
MluNI	TGGCCA	2 cut(s)	1087, 2234
MlyI	GAGTC	1 cut(s)	475
MmeI	TCCRAC	2 cut(s)	7, 1061
Mox20I	TGGCCA	2 cut(s)	1087, 2234
MroI	TCCGGA	1 cut(s)	688
MroXI	GAANNNNTTC	2 cut(s)	1430, 1640
MscI	TGGCCA	2 cut(s)	1087, 2234
MseI	TTAA	9 cut(s)	318, 407, 831, 984, 1049, 1122, 1266, 1535, 2154
MslI	CAYNNNNRTG	5 cut(s)	170, 1337, 1421, 1508, 2264
Msp20I	TGGCCA	2 cut(s)	1087, 2234
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	4 cut(s)	248, 689, 2251, 2264
MspR9I	CCNGG	8 cut(s)	1208, 1293, 1646, 1686, 1802, 1847, 2251, 2264
MunI	CAATTG	1 cut(s)	873
Mva1269I	GAATGC	3 cut(s)	338, 1145, 1893
MvaI	CCWGG	6 cut(s)	1208, 1293, 1646, 1686, 1802, 1847
MvnI	CGCG	1 cut(s)	1074
MwoI	GCNNNNNNNGC	6 cut(s)	344, 664, 1010, 1457, 1586, 2302
NciI	CCSGG	2 cut(s)	2251, 2264
NcoI	CCATGG	1 cut(s)	1885
NdeI	CATATG	3 cut(s)	205, 1105, 2137
NlaIII	CATG	7 cut(s)	272, 351, 522, 1138, 1174, 1348, 1889
NlaIV	GGNNCC	7 cut(s)	252, 363, 1062, 1683, 1713, 2268, 2290
NmuCI	GTSAC	5 cut(s)	415, 425, 1510, 1759, 2221
NspI	RCATGY	1 cut(s)	522
OliI	CACNNNNGTG	3 cut(s)	170, 1421, 2264
PagI	TCATGA	1 cut(s)	1170
PciI	ACATGT	1 cut(s)	518
PctI	GAATGC	3 cut(s)	338, 1145, 1893
PdmI	GAANNNNTTC	2 cut(s)	1430, 1640
PfeI	GAWTC	2 cut(s)	281, 644
PfoI	TCCNGGA	2 cut(s)	1684, 1845
PleI	GAGTC	1 cut(s)	475
PpsI	GAGTC	1 cut(s)	475
PscI	ACATGT	1 cut(s)	518
Psp6I	CCWGG	6 cut(s)	1206, 1291, 1644, 1684, 1800, 1845
PspGI	CCWGG	6 cut(s)	1206, 1291, 1644, 1684, 1800, 1845
PspN4I	GGNNCC	7 cut(s)	252, 363, 1062, 1683, 1713, 2268, 2290
PspPI	GGNCC	3 cut(s)	610, 822, 1741
PstI	CTGCAG	3 cut(s)	1528, 1594, 1867
PstNI	CAGNNNCTG	1 cut(s)	2312
PsuI	RGATCY	5 cut(s)	634, 1596, 1681, 2288, 2320
PvuII	CAGCTG	1 cut(s)	968
RsaI	GTAC	5 cut(s)	113, 363, 1191, 1945, 2207
RsaNI	GTAC	5 cut(s)	112, 362, 1190, 1944, 2206
RseI	CAYNNNNRTG	5 cut(s)	170, 1337, 1421, 1508, 2264
SaqAI	TTAA	9 cut(s)	318, 407, 831, 984, 1049, 1122, 1266, 1535, 2154
Sau96I	GGNCC	3 cut(s)	610, 822, 1741
SchI	GAGTC	1 cut(s)	475
ScrFI	CCNGG	8 cut(s)	1208, 1293, 1646, 1686, 1802, 1847, 2251, 2264
SduI	GDGCHC	3 cut(s)	669, 1015, 1063
SfaNI	GCATC	4 cut(s)	216, 234, 859, 1406
SfcI	CTRYAG	6 cut(s)	196, 1524, 1590, 1755, 1863, 2324
SmiMI	CAYNNNNRTG	5 cut(s)	170, 1337, 1421, 1508, 2264
SmlI	CTYRAG	2 cut(s)	295, 1382
SmoI	CTYRAG	2 cut(s)	295, 1382
Sse9I	AATT	8 cut(s)	179, 220, 602, 740, 873, 902, 1352, 1785
SsiI	CCGC	4 cut(s)	399, 562, 1613, 2254
SspI	AATATT	2 cut(s)	43, 394
SspMI	CTAG	6 cut(s)	68, 191, 423, 1029, 1401, 2271
StyD4I	CCNGG	8 cut(s)	1206, 1291, 1644, 1684, 1800, 1845, 2249, 2262
StyI	CCWWGG	4 cut(s)	825, 1435, 1885, 2020
TaaI	ACNGT	4 cut(s)	149, 1120, 1759, 2230
TaiI	ACGT	1 cut(s)	799
TasI	AATT	8 cut(s)	179, 220, 602, 740, 873, 902, 1352, 1785
TatI	WGTACW	2 cut(s)	111, 1189
TauI	GCSGC	1 cut(s)	401
TfiI	GAWTC	2 cut(s)	281, 644
Tru1I	TTAA	9 cut(s)	318, 407, 831, 984, 1049, 1122, 1266, 1535, 2154
Tru9I	TTAA	9 cut(s)	318, 407, 831, 984, 1049, 1122, 1266, 1535, 2154
TscAI	CASTG	5 cut(s)	1308, 1515, 1528, 1711, 1764
TseFI	GTSAC	5 cut(s)	415, 425, 1510, 1759, 2221
TseI	GCWGC	9 cut(s)	32, 965, 968, 1001, 1394, 1589, 1862, 1865, 1955
Tsp45I	GTSAC	5 cut(s)	415, 425, 1510, 1759, 2221
TspGWI	ACGGA	1 cut(s)	1808
TspRI	CASTG	5 cut(s)	1308, 1515, 1528, 1711, 1764
VneI	GTGCAC	1 cut(s)	1011
XapI	RAATTY	2 cut(s)	179, 1352
XbaI	TCTAGA	3 cut(s)	190, 1028, 1400
XceI	RCATGY	1 cut(s)	522
XcmI	CCANNNNNNNNNTGG	1 cut(s)	958
XmiI	GTMKAC	4 cut(s)	780, 1364, 1720, 1964
XmnI	GAANNNNTTC	2 cut(s)	1430, 1640
XspI	CTAG	6 cut(s)	68, 191, 423, 1029, 1401, 2271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.