Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0013353

Physical Location & Seq

Genomic Coordinates Reverse (-)

18288623 .. 18290677

Gene Structure 2055 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1073500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGTTGGCTGGTTGCTCTAGTTCCACATTGTTGTCACCAAGGCATAGATTGAGGAGTGAAGCAGCAGCCCAGTTACAAGCTTGCAGTTTCCAGCTACCATCGATGAGCACGCAGAGATTGGACTTACCATGCAGTTTTCCCCGCAAGGACACTTCAAGGTCGCAACCCATTAGGCCTGTGGGGCTTTCAGTTGAGAAATCGATCGATTCGAAGGTGGGGAGTTGTTCCCTGAAGCAGAGCATTCGGCTGCCTCCTCTGGCTACAACCGGTCCTGTGTCGGCAACGGCGGAGTTTGTGGAGGCGGGGAAGGAGAATCGTGATCAGTTTTCGGGGGAGAAGAAGAGAGGGAAGAGGTTCGCAGAGCCGGTGGATGATGATGAGTCTTGCAGAAACAGGGCAAAGAGGAAAAGGGGTTGTGGGGATAATGGCGGTGGCGATGAAGGCGGCGGTGGTTTGAGTTTAGGCCAATTGGGTGGTGGGAATTTTTGGTTTCAGCCTGGTTTCCAACTCCCTCCGCCGACGACTCAGCTTCCGTTTTCTCTGACATGTTCAGGGGATGACGAGAGGGTTTGTTATGTTCCGGGGGAGGCGATTTCGCAGCCTCTACCATTGTCAAACAGTCCTTGGTTGGACTCAATTGTGACTGAGATAACTGACTTAGGTAAGAAGGATGGAGGTGGGGAGGCTAGCCGTGGACTGGTGTGGGAAGAGTCAGCCGCGTCGAGTACTTCATCAGAGAGCCAGAGCTTGGCATTGAGTGTAAATGAGAGTGCCTCGGAACACGAAGCGGGCAACGGGACTAGGAATCCTTATGTCCCACATGGAGGAGCATGGGTTGTGGCAGAAGAGGATGATGATGATGATGATGAGAGTGAAGCAGAGCATATAGGGTTTGAGCTTGTTAGCTTGCTTACAGCTTGTGTGGAGGCAATTGGGTTGAAGAACATTGCAGCGATCAACCATTTTATAACTAAGTTGGGGGAGCTTGCTTCGCCGAAAGGAAGTGCTATAAGACGGCTTTCTGCTTATTACACTGAGGCATTATCTCTGAGAGTCACTAGGCTTTGGCCTCATGTGTTTCAGATCAACGCTCCTCGAGAGTTTGATCGAAGGGACGAGGACTATGGGATTGCGGTAAGGCTTCTAAACCAGTTTAGCCCAATTCCAAAGTTTGTTCATTTCACTTCAAATGAGATACTGCTGAGAGCTTTTGAAGGGAAGGACAGGGTTCACATCATAGATTTCGACATCAAGCAAGGGCTGCAGTGGCCTAGTTTGTTCCAGAGTTTGGCGTTGAGGACCAATCCTCCGAGCCATGTTAGGATCACAGGGATAGGGGAGTCGAAGCAAGAGCTCAATGAGACGAGAGATAGGCTTGCTGGATTTGCTGGGGCACTGAATCTGCCTTTCGAGTTTCACCCGGTTGTGGATAGGTTGGAGGATGTGAGGGTTTGGATGCTTCATGTCAAGGAGCATGAGAGTGTGGCTGTGAATTGTGTTTTCCAACTGCACAAAACACTTTATGACATGACAGGAGGAGCGCTGAGGGATTTCTTAGGACTCATTCGAAGTACAAACCCAACAATAGTTCTTATGGCAGAGCAAGAGGCTGAGCACAATGAGGCTAGGCTGGAGACAAGAGTTTCCAACTCATTGAAGTACTATTCTGCTATATTTGACTCGATTGGTTCTAGCCTTCCCTTGGGGAGCCAGGCCAGGATCAAAGTAGAGGAGATGTTTGCGCGAGAGATTAGGAACATCGTTGCTTGTGAAGGAAGTGATAGGTTGGAGAGGCACGAGAGCTTTGAGAAGTGGAGAAAGTGGATGGAGCAAGGAGGGTTTCGATGCGCAGGGATAACGGAGAGGGAAATGCTTCAGAGCCAGTTTCTGTTAAAGATGTATGCCAATGAGAGTTACGCCGTGAAGAAGCAAGAGCAAGACGGAGCAGCAGGGGCACTTACTCTAAGTTGGATGGATCGACCTCTTTACACAGTCTCAGCATGGACAACAGTTGATGTAGCAGGCAGCTCGTCATCATTTTCGAAACCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009966 GO:0009967 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900457 GO:1900459 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

685

Amino Acids

75.42

Weight (kDa)

5.56

Isoelectric Point (pI)

51.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	300 - 669	1.3e-126	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63100 AT1G63100
fragaria_vesca	FvH4_5g01550
malus_domestica	MD04G1066800.v1.1 MD06G1073500.v1.1
prunus_persica	Prupe.5G091700_v2.0.a1
pyrus_communis	pycom04g06010 pycom06g07270
rosa_chinensis	RchiOBHm_Chr7g0199131
rosa_laevigata	RLG00000003812
rosa_multiflora	Rmu_sc0006266.1_g000052
rosa_roxburghii	Rroxscaffold_3G00257050
rosa_rugosa	Rorug07G0052900
rosa_samantha	Rh7AG176400 Rh7BG179900 Rh7CG185500 Rh7DG179400
rosa_wichuraiana	Rw7G015510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	968
Acc16I	TGCGCA	1 cut(s)	1849
AccB7I	CCANNNNNTGG	2 cut(s)	748, 1288
AccII	CGCG	2 cut(s)	719, 1744
AclWI	GGATC	3 cut(s)	1331, 1727, 1983
AcsI	RAATTY	1 cut(s)	481
AcuI	CTGAAG	2 cut(s)	251, 1859
AfaI	GTAC	3 cut(s)	727, 1573, 1661
AfeI	AGCGCT	1 cut(s)	1542
AfiI	CCNNNNNNNGG	6 cut(s)	697, 748, 824, 1288, 1426, 1702
AflIII	ACRYGT	1 cut(s)	545
AgeI	ACCGGT	1 cut(s)	266
AgsI	TTSAA	5 cut(s)	156, 940, 1188, 1214, 1657
AjnI	CCWGG	3 cut(s)	496, 1710, 1715
Alw21I	GWGCWC	3 cut(s)	110, 1356, 1617
Alw26I	GTCTC	3 cut(s)	1355, 1628, 1999
AlwI	GGATC	3 cut(s)	1331, 1727, 1983
AlwNI	CAGNNNCTG	1 cut(s)	1888
Ama87I	CYCGRG	1 cut(s)	1095
Aor51HI	AGCGCT	1 cut(s)	1542
AoxI	GGCC	5 cut(s)	173, 463, 1067, 1268, 1713
ApeKI	GCWGC	8 cut(s)	62, 65, 247, 598, 950, 1261, 1946, 2025
ApoI	RAATTY	1 cut(s)	481
AsiGI	ACCGGT	1 cut(s)	266
Asp700I	GAANNNNTTC	2 cut(s)	353, 1872
AspLEI	GCGC	3 cut(s)	1543, 1744, 1850
AspS9I	GGNCC	2 cut(s)	269, 1299
AsuC2I	CCSGG	2 cut(s)	582, 1421
AsuHPI	GGTGA	2 cut(s)	27, 1409
AsuII	TTCGAA	3 cut(s)	209, 1567, 2042
AsuNHI	GCTAGC	1 cut(s)	686
AvaI	CYCGRG	1 cut(s)	1095
AvaII	GGWCC	2 cut(s)	269, 1299
BaeGI	GKGCMC	2 cut(s)	1396, 1957
BanII	GRGCYC	1 cut(s)	1356
BauI	CACGAG	1 cut(s)	1796
Bbv12I	GWGCWC	3 cut(s)	110, 1356, 1617
BbvCI	CCTCAGC	1 cut(s)	1544
BbvI	GCAGC	8 cut(s)	74, 77, 234, 610, 962, 1248, 1958, 2037
BccI	CCATC	4 cut(s)	106, 665, 1819, 1966
BceAI	ACGGC	4 cut(s)	300, 675, 1031, 1904
BcgI	CGANNNNNNTGC	4 cut(s)	224, 258, 2010, 2044
BciT130I	CCWGG	3 cut(s)	498, 1712, 1717
BclI	TGATCA	1 cut(s)	319
BcnI	CCSGG	2 cut(s)	582, 1421
BcoDI	GTCTC	3 cut(s)	1355, 1628, 1999
BfaI	CTAG	7 cut(s)	18, 687, 801, 1059, 1272, 1626, 1692
BfmI	CTRYAG	1 cut(s)	1262
BfoI	RGCGCY	1 cut(s)	1544
BglI	GCCNNNNNGGC	1 cut(s)	181
BlpI	GCTNAGC	1 cut(s)	1611
BmcAI	AGTACT	2 cut(s)	727, 1661
Bme1390I	CCNGG	5 cut(s)	498, 582, 1421, 1712, 1717
Bme18I	GGWCC	2 cut(s)	269, 1299
BmeT110I	CYCGRG	1 cut(s)	1095
BmgT120I	GGNCC	2 cut(s)	269, 1299
BmiI	GGNNCC	1 cut(s)	1709
BmrFI	CCNGG	5 cut(s)	498, 582, 1421, 1712, 1717
BmrI	ACTGGG	1 cut(s)	64
BmsI	GCATC	2 cut(s)	1446, 1835
BmtI	GCTAGC	1 cut(s)	690
BmuI	ACTGGG	1 cut(s)	64
BplI	GAGNNNNNCTC	2 cut(s)	758, 790
BpmI	CTGGAG	1 cut(s)	1652
Bpu10I	CCTNAGC	1 cut(s)	1544
Bpu1102I	GCTNAGC	1 cut(s)	1611
Bpu14I	TTCGAA	3 cut(s)	209, 1567, 2042
BpuMI	CCSGG	2 cut(s)	582, 1421
Bsa29I	ATCGAT	3 cut(s)	101, 200, 204
BsaJI	CCNNGG	6 cut(s)	38, 581, 623, 691, 774, 1701
BsaWI	WCCGGW	1 cut(s)	266
BsaXI	ACNNNNNCTCC	4 cut(s)	819, 849, 1291, 1321
Bsc4I	CCNNNNNNNGG	6 cut(s)	697, 748, 824, 1288, 1426, 1702
Bse118I	RCCGGY	2 cut(s)	266, 364
Bse1I	ACTGG	4 cut(s)	70, 702, 1150, 1882
Bse3DI	GCAATG	1 cut(s)	945
BseBI	CCWGG	3 cut(s)	498, 1712, 1717
BseCI	ATCGAT	3 cut(s)	101, 200, 204
BseDI	CCNNGG	6 cut(s)	38, 581, 623, 691, 774, 1701
BseGI	GGATG	8 cut(s)	376, 562, 676, 856, 1447, 1461, 1830, 1977
BseLI	CCNNNNNNNGG	6 cut(s)	697, 748, 824, 1288, 1426, 1702
BseMI	GCAATG	1 cut(s)	945
BseMII	CTCAG	8 cut(s)	539, 636, 1026, 1040, 1193, 1535, 1602, 2010
BseNI	ACTGG	4 cut(s)	70, 702, 1150, 1882
BseRI	GAGGAG	6 cut(s)	67, 243, 840, 1083, 1551, 1745
BseSI	GKGCMC	2 cut(s)	1396, 1957
BseXI	GCAGC	8 cut(s)	74, 77, 234, 610, 962, 1248, 1958, 2037
BseYI	CCCAGC	1 cut(s)	1388
BsgI	GTGCAG	1 cut(s)	1493
Bsh1236I	CGCG	2 cut(s)	719, 1744
Bsh1285I	CGRYCG	1 cut(s)	204
BshFI	GGCC	5 cut(s)	175, 465, 1069, 1270, 1715
BshTI	ACCGGT	1 cut(s)	266
BshVI	ATCGAT	3 cut(s)	101, 200, 204
BsiEI	CGRYCG	1 cut(s)	204
BsiHKAI	GWGCWC	3 cut(s)	110, 1356, 1617
BsiHKCI	CYCGRG	1 cut(s)	1095
BsiSI	CCGG	4 cut(s)	267, 365, 581, 1421
BslFI	GGGAC	3 cut(s)	800, 811, 1127
BslI	CCNNNNNNNGG	6 cut(s)	697, 748, 824, 1288, 1426, 1702
BsmAI	GTCTC	3 cut(s)	1355, 1628, 1999
BsmBI	CGTCTC	1 cut(s)	1355
BsmFI	GGGAC	3 cut(s)	800, 811, 1127
BsmI	GAATGC	1 cut(s)	240
BsnI	GGCC	5 cut(s)	175, 465, 1069, 1270, 1715
BsoBI	CYCGRG	1 cut(s)	1095
Bsp119I	TTCGAA	3 cut(s)	209, 1567, 2042
Bsp1286I	GDGCHC	5 cut(s)	110, 1356, 1396, 1617, 1957
Bsp143I	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
Bsp1720I	GCTNAGC	1 cut(s)	1611
BspANI	GGCC	5 cut(s)	175, 465, 1069, 1270, 1715
BspCNI	CTCAG	8 cut(s)	538, 637, 1027, 1041, 1194, 1536, 1603, 2009
BspDI	ATCGAT	3 cut(s)	101, 200, 204
BspFNI	CGCG	2 cut(s)	719, 1744
BspLI	GGNNCC	1 cut(s)	1709
BspMAI	CTGCAG	1 cut(s)	1266
BspOI	GCTAGC	1 cut(s)	690
BspPI	GGATC	3 cut(s)	1331, 1727, 1983
BspT104I	TTCGAA	3 cut(s)	209, 1567, 2042
BsrDI	GCAATG	1 cut(s)	945
BsrFI	RCCGGY	2 cut(s)	266, 364
BsrI	ACTGG	4 cut(s)	70, 702, 1150, 1882
BssAI	RCCGGY	2 cut(s)	266, 364
BssECI	CCNNGG	6 cut(s)	38, 581, 623, 691, 774, 1701
BssMI	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
BssSI	CACGAG	1 cut(s)	1796
BssT1I	CCWWGG	3 cut(s)	38, 623, 1701
Bst2BI	CACGAG	1 cut(s)	1796
Bst2UI	CCWGG	3 cut(s)	498, 1712, 1717
Bst4CI	ACNGT	3 cut(s)	620, 1993, 2011
Bst6I	CTCTTC	4 cut(s)	335, 344, 702, 840
BstAPI	GCANNNNNTGC	1 cut(s)	1261
BstBI	TTCGAA	3 cut(s)	209, 1567, 2042
BstC8I	GCNNGC	8 cut(s)	82, 110, 688, 790, 908, 987, 1377, 2023
BstDSI	CCRYGG	1 cut(s)	691
BstF5I	GGATG	8 cut(s)	376, 562, 676, 856, 1447, 1461, 1830, 1977
BstFNI	CGCG	2 cut(s)	719, 1744
BstH2I	RGCGCY	1 cut(s)	1544
BstHHI	GCGC	3 cut(s)	1543, 1744, 1850
BstKTI	GATC	8 cut(s)	204, 322, 957, 1086, 1108, 1326, 1722, 1978
BstMAI	GTCTC	3 cut(s)	1355, 1628, 1999
BstMBI	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
BstMCI	CGRYCG	1 cut(s)	204
BstMWI	GCNNNNNNNGC	7 cut(s)	181, 441, 991, 1261, 1267, 1385, 1952
BstNI	CCWGG	3 cut(s)	498, 1712, 1717
BstNSI	RCATGY	1 cut(s)	549
BstSCI	CCNGG	5 cut(s)	496, 580, 1419, 1710, 1715
BstSFI	CTRYAG	1 cut(s)	1262
BstSLI	GKGCMC	2 cut(s)	1396, 1957
BstUI	CGCG	2 cut(s)	719, 1744
BstV1I	GCAGC	8 cut(s)	74, 77, 234, 610, 962, 1248, 1958, 2037
BstXI	CCANNNNNNTGG	1 cut(s)	473
Bsu15I	ATCGAT	3 cut(s)	101, 200, 204
BsuRI	GGCC	5 cut(s)	175, 465, 1069, 1270, 1715
BsuTUI	ATCGAT	3 cut(s)	101, 200, 204
BtgI	CCRYGG	1 cut(s)	691
BtgZI	GCGATG	1 cut(s)	450
BtsCI	GGATG	8 cut(s)	376, 562, 676, 856, 1447, 1461, 1830, 1977
BtsI	GCAGTG	1 cut(s)	1271
BtsIMutI	CAGTG	3 cut(s)	1032, 1271, 1394
Cac8I	GCNNGC	8 cut(s)	82, 110, 688, 790, 908, 987, 1377, 2023
CaiI	CAGNNNCTG	1 cut(s)	1888
CfoI	GCGC	3 cut(s)	1543, 1744, 1850
Cfr10I	RCCGGY	2 cut(s)	266, 364
Cfr13I	GGNCC	2 cut(s)	269, 1299
ClaI	ATCGAT	3 cut(s)	101, 200, 204
CseI	GACGC	1 cut(s)	708
Csp6I	GTAC	3 cut(s)	726, 1572, 1660
CspAI	ACCGGT	1 cut(s)	266
CviQI	GTAC	3 cut(s)	726, 1572, 1660
DpnI	GATC	8 cut(s)	203, 321, 956, 1085, 1107, 1325, 1721, 1977
DpnII	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
Eam1104I	CTCTTC	4 cut(s)	335, 344, 702, 840
EarI	CTCTTC	4 cut(s)	335, 344, 702, 840
EciI	GGCGGA	2 cut(s)	302, 504
Ecl136II	GAGCTC	1 cut(s)	1354
Eco130I	CCWWGG	3 cut(s)	38, 623, 1701
Eco147I	AGGCCT	1 cut(s)	175
Eco24I	GRGCYC	1 cut(s)	1356
Eco47I	GGWCC	2 cut(s)	269, 1299
Eco47III	AGCGCT	1 cut(s)	1542
Eco53kI	GAGCTC	1 cut(s)	1354
Eco57I	CTGAAG	2 cut(s)	251, 1859
Eco88I	CYCGRG	1 cut(s)	1095
EcoICRI	GAGCTC	1 cut(s)	1354
EcoRII	CCWGG	3 cut(s)	496, 1710, 1715
EcoT14I	CCWWGG	3 cut(s)	38, 623, 1701
EcoT38I	GRGCYC	1 cut(s)	1356
ErhI	CCWWGG	3 cut(s)	38, 623, 1701
Esp3I	CGTCTC	1 cut(s)	1355
FaqI	GGGAC	3 cut(s)	800, 811, 1127
FauI	CCCGC	3 cut(s)	149, 295, 781
FbaI	TGATCA	1 cut(s)	319
FokI	GGATG	8 cut(s)	383, 569, 683, 863, 1454, 1468, 1837, 1984
FriOI	GRGCYC	1 cut(s)	1356
FspBI	CTAG	7 cut(s)	18, 687, 801, 1059, 1272, 1626, 1692
FspI	TGCGCA	1 cut(s)	1849
GlaI	GCGC	3 cut(s)	1542, 1743, 1849
GsaI	CCCAGC	1 cut(s)	1392
GsuI	CTGGAG	1 cut(s)	1652
HaeII	RGCGCY	1 cut(s)	1544
HaeIII	GGCC	5 cut(s)	175, 465, 1069, 1270, 1715
HapII	CCGG	4 cut(s)	267, 365, 581, 1421
HgaI	GACGC	1 cut(s)	708
HhaI	GCGC	3 cut(s)	1543, 1744, 1850
Hin6I	GCGC	3 cut(s)	1541, 1742, 1848
HinP1I	GCGC	3 cut(s)	1541, 1742, 1848
HindIII	AAGCTT	1 cut(s)	78
HpaII	CCGG	4 cut(s)	267, 365, 581, 1421
HphI	GGTGA	2 cut(s)	27, 1409
Hpy166II	GTNNAC	2 cut(s)	695, 1231
Hpy188I	TCNGA	7 cut(s)	543, 736, 778, 1050, 1083, 1311, 1878
Hpy188III	TCNNGA	3 cut(s)	317, 1097, 1282
Hpy8I	GTNNAC	2 cut(s)	695, 1231
Hpy99I	CGWCG	2 cut(s)	523, 724
HpyAV	CCTTC	9 cut(s)	205, 301, 434, 661, 1104, 1208, 1213, 1706, 1766
HpyCH4III	ACNGT	3 cut(s)	620, 1993, 2011
HpyCH4V	TGCA	6 cut(s)	84, 132, 387, 950, 1264, 1510
HpyF10VI	GCNNNNNNNGC	7 cut(s)	181, 441, 991, 1261, 1267, 1385, 1952
HspAI	GCGC	3 cut(s)	1541, 1742, 1848
Ksp22I	TGATCA	1 cut(s)	319
Kzo9I	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
LmnI	GCTCC	8 cut(s)	827, 982, 1096, 1471, 1538, 1707, 1828, 1943
Lsp1109I	GCAGC	8 cut(s)	74, 77, 234, 610, 962, 1248, 1958, 2037
LweI	GCATC	2 cut(s)	1446, 1835
MaeI	CTAG	7 cut(s)	18, 687, 801, 1059, 1272, 1626, 1692
MaeIII	GTNAC	5 cut(s)	33, 72, 640, 1054, 1913
MalI	GATC	8 cut(s)	203, 321, 956, 1085, 1107, 1325, 1721, 1977
MboI	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
MboII	GAAGA	7 cut(s)	349, 352, 361, 719, 857, 952, 1936
MfeI	CAATTG	3 cut(s)	467, 636, 930
MhlI	GDGCHC	5 cut(s)	110, 1356, 1396, 1617, 1957
MluCI	AATT	6 cut(s)	467, 481, 636, 930, 1161, 1492
MlyI	GAGTC	8 cut(s)	389, 517, 626, 719, 1062, 1349, 1554, 1673
MmeI	TCCRAC	7 cut(s)	529, 609, 1416, 1528, 1671, 1767, 1949
MroXI	GAANNNNTTC	2 cut(s)	353, 1872
MseI	TTAA	2 cut(s)	1892, 2053
MslI	CAYNNNNRTG	1 cut(s)	1479
MspI	CCGG	4 cut(s)	267, 365, 581, 1421
MspR9I	CCNGG	5 cut(s)	498, 582, 1421, 1712, 1717
MunI	CAATTG	3 cut(s)	467, 636, 930
Mva1269I	GAATGC	1 cut(s)	240
MvaI	CCWGG	3 cut(s)	498, 1712, 1717
MvnI	CGCG	2 cut(s)	719, 1744
MwoI	GCNNNNNNNGC	7 cut(s)	181, 441, 991, 1261, 1267, 1385, 1952
NciI	CCSGG	2 cut(s)	582, 1421
NdeII	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
NheI	GCTAGC	1 cut(s)	686
NlaIV	GGNNCC	1 cut(s)	1709
NmuCI	GTSAC	3 cut(s)	33, 640, 1054
NsbI	TGCGCA	1 cut(s)	1849
NspI	RCATGY	1 cut(s)	549
NspV	TTCGAA	3 cut(s)	209, 1567, 2042
PaeR7I	CTCGAG	1 cut(s)	1095
PceI	AGGCCT	1 cut(s)	175
PciI	ACATGT	1 cut(s)	545
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PctI	GAATGC	1 cut(s)	240
PdmI	GAANNNNTTC	2 cut(s)	353, 1872
PfeI	GAWTC	4 cut(s)	206, 313, 805, 1399
PflMI	CCANNNNNTGG	2 cut(s)	748, 1288
PinAI	ACCGGT	1 cut(s)	266
Ple19I	CGATCG	1 cut(s)	204
PleI	GAGTC	8 cut(s)	388, 517, 626, 718, 1061, 1348, 1554, 1673
PpsI	GAGTC	8 cut(s)	388, 517, 626, 718, 1061, 1348, 1554, 1673
PscI	ACATGT	1 cut(s)	545
PsiI	TTATAA	1 cut(s)	968
Psp124BI	GAGCTC	1 cut(s)	1356
Psp6I	CCWGG	3 cut(s)	496, 1710, 1715
PspFI	CCCAGC	1 cut(s)	1388
PspGI	CCWGG	3 cut(s)	496, 1710, 1715
PspN4I	GGNNCC	1 cut(s)	1709
PspPI	GGNCC	2 cut(s)	269, 1299
PstI	CTGCAG	1 cut(s)	1266
PstNI	CAGNNNCTG	1 cut(s)	1888
PvuI	CGATCG	1 cut(s)	204
RsaI	GTAC	3 cut(s)	727, 1573, 1661
RsaNI	GTAC	3 cut(s)	726, 1572, 1660
RseI	CAYNNNNRTG	1 cut(s)	1479
SacI	GAGCTC	1 cut(s)	1356
SaqAI	TTAA	2 cut(s)	1892, 2053
Sau3AI	GATC	8 cut(s)	201, 319, 954, 1083, 1105, 1323, 1719, 1975
Sau96I	GGNCC	2 cut(s)	269, 1299
ScaI	AGTACT	2 cut(s)	727, 1661
SchI	GAGTC	8 cut(s)	389, 517, 626, 719, 1062, 1349, 1554, 1673
ScrFI	CCNGG	5 cut(s)	498, 582, 1421, 1712, 1717
SduI	GDGCHC	5 cut(s)	110, 1356, 1396, 1617, 1957
SfaNI	GCATC	2 cut(s)	1446, 1835
SfcI	CTRYAG	1 cut(s)	1262
Sfr274I	CTCGAG	1 cut(s)	1095
SfuI	TTCGAA	3 cut(s)	209, 1567, 2042
SinI	GGWCC	2 cut(s)	269, 1299
SlaI	CTCGAG	1 cut(s)	1095
SmiMI	CAYNNNNRTG	1 cut(s)	1479
SmlI	CTYRAG	1 cut(s)	1095
SmoI	CTYRAG	1 cut(s)	1095
Sse9I	AATT	6 cut(s)	467, 481, 636, 930, 1161, 1492
SseBI	AGGCCT	1 cut(s)	175
SspMI	CTAG	7 cut(s)	18, 687, 801, 1059, 1272, 1626, 1692
SstI	GAGCTC	1 cut(s)	1356
StuI	AGGCCT	1 cut(s)	175
StyD4I	CCNGG	5 cut(s)	496, 580, 1419, 1710, 1715
StyI	CCWWGG	3 cut(s)	38, 623, 1701
TaaI	ACNGT	3 cut(s)	620, 1993, 2011
TasI	AATT	6 cut(s)	467, 481, 636, 930, 1161, 1492
TatI	WGTACW	3 cut(s)	725, 1571, 1659
TauI	GCSGC	2 cut(s)	447, 719
TfiI	GAWTC	4 cut(s)	206, 313, 805, 1399
Tru1I	TTAA	2 cut(s)	1892, 2053
Tru9I	TTAA	2 cut(s)	1892, 2053
TscAI	CASTG	3 cut(s)	1039, 1271, 1401
TseFI	GTSAC	3 cut(s)	33, 640, 1054
TseI	GCWGC	8 cut(s)	62, 65, 247, 598, 950, 1261, 1946, 2025
Tsp45I	GTSAC	3 cut(s)	33, 640, 1054
TspDTI	ATGAA	4 cut(s)	453, 720, 1166, 1451
TspGWI	ACGGA	3 cut(s)	522, 1874, 1956
TspRI	CASTG	3 cut(s)	1039, 1271, 1401
Van91I	CCANNNNNTGG	2 cut(s)	748, 1288
VpaK11BI	GGWCC	2 cut(s)	269, 1299
XapI	RAATTY	1 cut(s)	481
XceI	RCATGY	1 cut(s)	549
XcmI	CCANNNNNNNNNTGG	2 cut(s)	175, 473
XhoI	CTCGAG	1 cut(s)	1095
XmnI	GAANNNNTTC	2 cut(s)	353, 1872
XspI	CTAG	7 cut(s)	18, 687, 801, 1059, 1272, 1626, 1692
ZrmI	AGTACT	2 cut(s)	727, 1661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.