Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0013353

Physical Location & Seq

Genomic Coordinates Reverse (-)

11853287 .. 11855323

Gene Structure 2037 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g07270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGTTGGCTGGTTGCTCTAGTTCCACATTGTTGTCACCAAGGCATAGACTGAGGAGTGAAGCAGCAGCCCAGTTACAAGCTTGCAGTTTCCAGCTACCATCAATGAGCACGCAGAGATTGGACTTACCATGCAGTTTTCCCCGCAAGGACACCTCAAGGTCGCAACCCATTAGGCCTGTGGGGCTTTCGGTTGAGAAATCGATCGATTCGAAGGCGGGGAGTTGTTCCCTGAAGCAGAGCATCCGGCTGCCTCCTCTGGCTACAACCGGTCCTGTGTCGGCAACGGCGGCGTTCGTGGAGGCTGGGAAGGAGAATCGTAATCACTTTTGGAGGGAGAAGAAGATAGGGAAGAGGTTCGCGGAGCCGGTGGATGATGATGAGTCTTGCAGAAACAGGGCAAAGAGGAAAAGGGGTTGTGGGGATAATGGCGGTGGTTTGGGTTTAGGCCAATTGGGTGGTGGGAATTTTTGGTTTCAGCCTGGTTTCCAACTCCCTCCGCGGACGACTCAGCTTCCGTTTTCTCTGACATGTTCAGGGGATGACGAGAGGGTTTGTTATGTTCCGGGGGAGGCGATTTCGCAGCCTCTGCCATTGTCAAACAGTCCTTGGTTGGACTCAATTGTTACTGAGATCACTGACTTAGGTAAGAAGGATGGAGGTGGGGAGGATAGCCGTGGACTGGTGAGGGAAGCGTCAGCGGCGTCGAGTACTTCATCAGAGAGCCAGAGCTTGGCATTGAGGGTAAATGAGAGTGCCTCGGAACACGAAGCGGGCAACGGGACTAGGAATCCTTATGTCCCATATGGAGGAGCAGGGGTTGTGGCAGAGGAGGAGGAGGATGATGATGATGAGAGTGAAGCAGAGCATATAGGGTTTGAGCTTGTTAGCTTGCTTACAGCTTGTGTGGAGGCAATTGGGTTGAAGAACATTGCAGCGATCGACCATTTTATAGCTAAGTTGGGGGAGCTTGCTTCGCCGAAAGGAAGTGCTATAAGTCGGCTTTCTGCTTATTACACTGAGGCATTATCTCTGAGAGTCACTAGGCTTTGGCCTCATGTGTTTCAGATCAACGCTCCTCGAGAGTTTGATCGAAGGGATGAGGACTCTGGGATTGCGGTAAGGCTTCTAAACCAGGTTAGCGCAATTCCAAAGTTTGTTCATTTCACTTCGAATGAGATACTACTGAGAGCTTTTGAAGGGAAGGACAGGGTTCACATCATAGATTTCGACATCAAGCAAGGGTTGCAGTGGCCTAGTTTGTTCCAGAGTTTGGCGTTGAGGACCAATCCTCCGAGCCATGTTAGGATCACGGGGATAGGGGAGTCGAAGCAAGAGCTCAACGAGACGGGAGATAGGCTTGCTGGATTTGCTGGGGCACTGAATCTGCCTTTCGAGTTTCACCCGGTTGTGGACAGGTTGGAGGATGTGAGGGTTTGGATGCTTCATGTCAAGGAGCATGAGAGTGTGGCTGTGAATTGTGTTTTCCAACTGCACAAAACACTTTATGACATGACAGGAGGTGCGCTGAGGGATTTCTTAGGACTCGTTCGAAGTACAAACCCGACAATAGTTCTTATGGCAGAGCAAGAGGCTGAGCACAATGAGGCTAGGCTGGAGACAAGAGTTTCCAACTCATTGAAGTACTACTCTGCCATATTTGACTCGATTGGTTCTAGCCTTCCCTTGGGGAGCCAGGCCAGGATCAAAGTAGAGGAAATGTTTGCGCGAGAGATTAGGAACATTGTTGCTTGTGAAGGAAGCGATAGGTTGGAGAGGCACGAGAGCTTTGAGAAGTGGAGAAAGTGGATGGAGCAAGGAGGGTTTCGATGCGCAGGGATAACGGAGAGGGAAATGCTTCAGAGCCAGTTTCTGTTAAAGATGTATGCCAGTGAGAGTTACGCCGTGAAGAAGCAAGAGCAAGACGGAGCAGCAGAGGCACTTACTCTAAGTTGGATGGATCAGCCTCTTTACACAGTCTCAGCATGGACAACAGTTGATGTAGCAGGCAGCTCGTCATCATTTTCGGAACCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009966 GO:0009967 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900457 GO:1900459 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

679

Amino Acids

74.66

Weight (kDa)

5.56

Isoelectric Point (pI)

52.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	294 - 663	2e-125	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63100 AT1G63100
fragaria_vesca	FvH4_5g01550
malus_domestica	MD04G1066800.v1.1 MD06G1073500.v1.1
prunus_persica	Prupe.5G091700_v2.0.a1
pyrus_communis	pycom04g06010 pycom06g07270
rosa_chinensis	RchiOBHm_Chr7g0199131
rosa_laevigata	RLG00000003812
rosa_multiflora	Rmu_sc0006266.1_g000052
rosa_roxburghii	Rroxscaffold_3G00257050
rosa_rugosa	Rorug07G0052900
rosa_samantha	Rh7AG176400 Rh7BG179900 Rh7CG185500 Rh7DG179400
rosa_wichuraiana	Rw7G015510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1831
AccB7I	CCANNNNNTGG	2 cut(s)	730, 1270
AccII	CGCG	3 cut(s)	359, 499, 1726
AclWI	GGATC	3 cut(s)	1313, 1709, 1965
AcsI	RAATTY	1 cut(s)	463
AcuI	CTGAAG	2 cut(s)	251, 1841
AcyI	GRCGYC	1 cut(s)	701
AfaI	GTAC	3 cut(s)	709, 1555, 1643
AfiI	CCNNNNNNNGG	6 cut(s)	679, 730, 806, 1270, 1408, 1684
AflIII	ACRYGT	1 cut(s)	527
AgeI	ACCGGT	1 cut(s)	266
AgsI	TTSAA	3 cut(s)	922, 1196, 1639
AjnI	CCWGG	4 cut(s)	478, 1131, 1692, 1697
Alw21I	GWGCWC	3 cut(s)	110, 1338, 1599
Alw26I	GTCTC	3 cut(s)	1337, 1610, 1981
AlwI	GGATC	3 cut(s)	1313, 1709, 1965
AlwNI	CAGNNNCTG	2 cut(s)	586, 1870
Ama87I	CYCGRG	1 cut(s)	1077
AoxI	GGCC	5 cut(s)	173, 445, 1049, 1250, 1695
ApeKI	GCWGC	7 cut(s)	62, 65, 247, 580, 932, 1928, 2007
ApoI	RAATTY	1 cut(s)	463
AsiGI	ACCGGT	1 cut(s)	266
Asp700I	GAANNNNTTC	2 cut(s)	353, 1854
AspLEI	GCGC	4 cut(s)	1142, 1525, 1726, 1832
AspS9I	GGNCC	2 cut(s)	269, 1281
AsuC2I	CCSGG	2 cut(s)	564, 1403
AsuHPI	GGTGA	3 cut(s)	27, 694, 1391
AsuII	TTCGAA	3 cut(s)	209, 1169, 1549
AvaI	CYCGRG	1 cut(s)	1077
AvaII	GGWCC	2 cut(s)	269, 1281
BaeGI	GKGCMC	1 cut(s)	1378
BanII	GRGCYC	1 cut(s)	1338
BauI	CACGAG	1 cut(s)	1778
Bbv12I	GWGCWC	3 cut(s)	110, 1338, 1599
BbvCI	CCTCAGC	1 cut(s)	1526
BbvI	GCAGC	7 cut(s)	74, 77, 234, 592, 944, 1940, 2019
BccI	CCATC	4 cut(s)	106, 647, 1801, 1948
BceAI	ACGGC	3 cut(s)	300, 657, 1886
BcgI	CGANNNNNNTGC	2 cut(s)	1992, 2026
BciT130I	CCWGG	4 cut(s)	480, 1133, 1694, 1699
BcnI	CCSGG	2 cut(s)	564, 1403
BcoDI	GTCTC	3 cut(s)	1337, 1610, 1981
BfaI	CTAG	6 cut(s)	18, 783, 1041, 1254, 1608, 1674
BglI	GCCNNNNNGGC	1 cut(s)	181
BisI	GCNGC	9 cut(s)	63, 66, 248, 288, 581, 699, 933, 1929, 2008
BlpI	GCTNAGC	1 cut(s)	1593
BlsI	GCNGC	9 cut(s)	64, 67, 249, 289, 582, 700, 934, 1930, 2009
BmcAI	AGTACT	2 cut(s)	709, 1643
Bme1390I	CCNGG	6 cut(s)	480, 564, 1133, 1403, 1694, 1699
Bme18I	GGWCC	2 cut(s)	269, 1281
BmeT110I	CYCGRG	1 cut(s)	1077
BmgT120I	GGNCC	2 cut(s)	269, 1281
BmiI	GGNNCC	3 cut(s)	363, 1691, 2028
BmrFI	CCNGG	6 cut(s)	480, 564, 1133, 1403, 1694, 1699
BmrI	ACTGGG	1 cut(s)	64
BmsI	GCATC	3 cut(s)	249, 1428, 1817
BmuI	ACTGGG	1 cut(s)	64
BplI	GAGNNNNNCTC	2 cut(s)	740, 772
BpmI	CTGGAG	1 cut(s)	1634
Bpu10I	CCTNAGC	1 cut(s)	1526
Bpu1102I	GCTNAGC	1 cut(s)	1593
Bpu14I	TTCGAA	3 cut(s)	209, 1169, 1549
BpuEI	CTTGAG	1 cut(s)	139
BpuMI	CCSGG	2 cut(s)	564, 1403
Bsa29I	ATCGAT	2 cut(s)	200, 204
BsaHI	GRCGYC	1 cut(s)	701
BsaJI	CCNNGG	7 cut(s)	38, 497, 563, 605, 673, 756, 1683
BsaWI	WCCGGW	1 cut(s)	266
BsaXI	ACNNNNNCTCC	4 cut(s)	801, 831, 1273, 1303
Bsc4I	CCNNNNNNNGG	6 cut(s)	679, 730, 806, 1270, 1408, 1684
Bse118I	RCCGGY	2 cut(s)	266, 364
Bse1I	ACTGG	4 cut(s)	70, 684, 1864, 1887
Bse3DI	GCAATG	1 cut(s)	927
BseBI	CCWGG	4 cut(s)	480, 1133, 1694, 1699
BseCI	ATCGAT	2 cut(s)	200, 204
BseDI	CCNNGG	7 cut(s)	38, 497, 563, 605, 673, 756, 1683
BseLI	CCNNNNNNNGG	6 cut(s)	679, 730, 806, 1270, 1408, 1684
BseMI	GCAATG	1 cut(s)	927
BseMII	CTCAG	9 cut(s)	41, 521, 618, 1008, 1022, 1175, 1517, 1584, 1992
BseNI	ACTGG	4 cut(s)	70, 684, 1864, 1887
BseRI	GAGGAG	7 cut(s)	67, 243, 822, 842, 845, 848, 1065
BseSI	GKGCMC	1 cut(s)	1378
BseXI	GCAGC	7 cut(s)	74, 77, 234, 592, 944, 1940, 2019
BseYI	CCCAGC	2 cut(s)	302, 1370
BsgI	GTGCAG	1 cut(s)	1475
Bsh1236I	CGCG	3 cut(s)	359, 499, 1726
Bsh1285I	CGRYCG	2 cut(s)	204, 939
BshFI	GGCC	5 cut(s)	175, 447, 1051, 1252, 1697
BshTI	ACCGGT	1 cut(s)	266
BshVI	ATCGAT	2 cut(s)	200, 204
BsiEI	CGRYCG	2 cut(s)	204, 939
BsiHKAI	GWGCWC	3 cut(s)	110, 1338, 1599
BsiHKCI	CYCGRG	1 cut(s)	1077
BsiSI	CCGG	5 cut(s)	244, 267, 365, 563, 1403
BslFI	GGGAC	2 cut(s)	782, 793
BslI	CCNNNNNNNGG	6 cut(s)	679, 730, 806, 1270, 1408, 1684
BsmAI	GTCTC	3 cut(s)	1337, 1610, 1981
BsmBI	CGTCTC	1 cut(s)	1337
BsmFI	GGGAC	2 cut(s)	782, 793
BsnI	GGCC	5 cut(s)	175, 447, 1051, 1252, 1697
BsoBI	CYCGRG	1 cut(s)	1077
Bsp119I	TTCGAA	3 cut(s)	209, 1169, 1549
Bsp1286I	GDGCHC	4 cut(s)	110, 1338, 1378, 1599
Bsp143I	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
Bsp1720I	GCTNAGC	1 cut(s)	1593
BspANI	GGCC	5 cut(s)	175, 447, 1051, 1252, 1697
BspCNI	CTCAG	9 cut(s)	42, 520, 619, 1009, 1023, 1176, 1518, 1585, 1991
BspDI	ATCGAT	2 cut(s)	200, 204
BspFNI	CGCG	3 cut(s)	359, 499, 1726
BspLI	GGNNCC	3 cut(s)	363, 1691, 2028
BspPI	GGATC	3 cut(s)	1313, 1709, 1965
BspT104I	TTCGAA	3 cut(s)	209, 1169, 1549
BsrDI	GCAATG	1 cut(s)	927
BsrFI	RCCGGY	2 cut(s)	266, 364
BsrI	ACTGG	4 cut(s)	70, 684, 1864, 1887
BssAI	RCCGGY	2 cut(s)	266, 364
BssECI	CCNNGG	7 cut(s)	38, 497, 563, 605, 673, 756, 1683
BssMI	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
BssNI	GRCGYC	1 cut(s)	701
BssSI	CACGAG	1 cut(s)	1778
BssT1I	CCWWGG	3 cut(s)	38, 605, 1683
Bst2BI	CACGAG	1 cut(s)	1778
Bst2UI	CCWGG	4 cut(s)	480, 1133, 1694, 1699
Bst4CI	ACNGT	3 cut(s)	602, 1975, 1993
Bst6I	CTCTTC	1 cut(s)	344
BstACI	GRCGYC	1 cut(s)	701
BstAPI	GCANNNNNTGC	2 cut(s)	586, 1243
BstBI	TTCGAA	3 cut(s)	209, 1169, 1549
BstC8I	GCNNGC	7 cut(s)	82, 110, 772, 890, 969, 1359, 2005
BstDSI	CCRYGG	2 cut(s)	497, 673
BstFNI	CGCG	3 cut(s)	359, 499, 1726
BstHHI	GCGC	4 cut(s)	1142, 1525, 1726, 1832
BstKTI	GATC	8 cut(s)	204, 633, 939, 1068, 1090, 1308, 1704, 1960
BstMAI	GTCTC	3 cut(s)	1337, 1610, 1981
BstMBI	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
BstMCI	CGRYCG	2 cut(s)	204, 939
BstMWI	GCNNNNNNNGC	8 cut(s)	181, 287, 586, 698, 973, 1243, 1367, 1934
BstNI	CCWGG	4 cut(s)	480, 1133, 1694, 1699
BstNSI	RCATGY	1 cut(s)	531
BstSCI	CCNGG	6 cut(s)	478, 562, 1131, 1401, 1692, 1697
BstSLI	GKGCMC	1 cut(s)	1378
BstUI	CGCG	3 cut(s)	359, 499, 1726
BstV1I	GCAGC	7 cut(s)	74, 77, 234, 592, 944, 1940, 2019
BstXI	CCANNNNNNTGG	1 cut(s)	455
Bsu15I	ATCGAT	2 cut(s)	200, 204
BsuRI	GGCC	5 cut(s)	175, 447, 1051, 1252, 1697
BsuTUI	ATCGAT	2 cut(s)	200, 204
BtgI	CCRYGG	2 cut(s)	497, 673
BtsI	GCAGTG	1 cut(s)	1253
BtsIMutI	CAGTG	5 cut(s)	633, 1014, 1253, 1376, 1894
Cac8I	GCNNGC	7 cut(s)	82, 110, 772, 890, 969, 1359, 2005
CaiI	CAGNNNCTG	2 cut(s)	586, 1870
CfoI	GCGC	4 cut(s)	1142, 1525, 1726, 1832
Cfr10I	RCCGGY	2 cut(s)	266, 364
Cfr13I	GGNCC	2 cut(s)	269, 1281
Cfr42I	CCGCGG	1 cut(s)	500
ClaI	ATCGAT	2 cut(s)	200, 204
CseI	GACGC	2 cut(s)	681, 690
CsiI	ACCWGGT	1 cut(s)	1131
Csp6I	GTAC	3 cut(s)	708, 1554, 1642
CspAI	ACCGGT	1 cut(s)	266
CviAII	CATG	8 cut(s)	129, 528, 1055, 1298, 1445, 1457, 1510, 1983
CviQI	GTAC	3 cut(s)	708, 1554, 1642
DpnI	GATC	8 cut(s)	203, 632, 938, 1067, 1089, 1307, 1703, 1959
DpnII	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
Eam1104I	CTCTTC	1 cut(s)	344
EarI	CTCTTC	1 cut(s)	344
Ecl136II	GAGCTC	1 cut(s)	1336
Eco130I	CCWWGG	3 cut(s)	38, 605, 1683
Eco147I	AGGCCT	1 cut(s)	175
Eco24I	GRGCYC	1 cut(s)	1338
Eco47I	GGWCC	2 cut(s)	269, 1281
Eco53kI	GAGCTC	1 cut(s)	1336
Eco57I	CTGAAG	2 cut(s)	251, 1841
Eco88I	CYCGRG	1 cut(s)	1077
EcoICRI	GAGCTC	1 cut(s)	1336
EcoRII	CCWGG	4 cut(s)	478, 1131, 1692, 1697
EcoT14I	CCWWGG	3 cut(s)	38, 605, 1683
EcoT38I	GRGCYC	1 cut(s)	1338
ErhI	CCWWGG	3 cut(s)	38, 605, 1683
Esp3I	CGTCTC	1 cut(s)	1337
FaeI	CATG	8 cut(s)	132, 531, 1058, 1301, 1448, 1460, 1513, 1986
FaqI	GGGAC	2 cut(s)	782, 793
FatI	CATG	8 cut(s)	128, 527, 1054, 1297, 1444, 1456, 1509, 1982
FauI	CCCGC	3 cut(s)	149, 208, 763
FauNDI	CATATG	1 cut(s)	802
Fnu4HI	GCNGC	9 cut(s)	63, 66, 248, 288, 581, 699, 933, 1929, 2008
FriOI	GRGCYC	1 cut(s)	1338
Fsp4HI	GCNGC	9 cut(s)	63, 66, 248, 288, 581, 699, 933, 1929, 2008
FspBI	CTAG	6 cut(s)	18, 783, 1041, 1254, 1608, 1674
FspI	TGCGCA	1 cut(s)	1831
GlaI	GCGC	4 cut(s)	1141, 1524, 1725, 1831
GluI	GCNGC	9 cut(s)	63, 66, 248, 288, 581, 699, 933, 1929, 2008
GsaI	CCCAGC	2 cut(s)	306, 1374
GsuI	CTGGAG	1 cut(s)	1634
HaeIII	GGCC	5 cut(s)	175, 447, 1051, 1252, 1697
HapII	CCGG	5 cut(s)	244, 267, 365, 563, 1403
HgaI	GACGC	2 cut(s)	681, 690
HhaI	GCGC	4 cut(s)	1142, 1525, 1726, 1832
Hin1I	GRCGYC	1 cut(s)	701
Hin1II	CATG	8 cut(s)	132, 531, 1058, 1301, 1448, 1460, 1513, 1986
Hin6I	GCGC	4 cut(s)	1140, 1523, 1724, 1830
HinP1I	GCGC	4 cut(s)	1140, 1523, 1724, 1830
HindIII	AAGCTT	1 cut(s)	78
HpaII	CCGG	5 cut(s)	244, 267, 365, 563, 1403
HphI	GGTGA	3 cut(s)	27, 694, 1391
Hpy166II	GTNNAC	3 cut(s)	677, 1213, 1411
Hpy188I	TCNGA	8 cut(s)	525, 718, 760, 1032, 1065, 1293, 1860, 2026
Hpy188III	TCNNGA	2 cut(s)	1079, 1264
Hpy8I	GTNNAC	3 cut(s)	677, 1213, 1411
Hpy99I	CGWCG	1 cut(s)	706
HpyAV	CCTTC	8 cut(s)	205, 301, 643, 1086, 1190, 1195, 1688, 1748
HpyCH4III	ACNGT	3 cut(s)	602, 1975, 1993
HpyCH4V	TGCA	6 cut(s)	84, 132, 387, 932, 1246, 1492
HpyF10VI	GCNNNNNNNGC	8 cut(s)	181, 287, 586, 698, 973, 1243, 1367, 1934
Hsp92I	GRCGYC	1 cut(s)	701
Hsp92II	CATG	8 cut(s)	132, 531, 1058, 1301, 1448, 1460, 1513, 1986
HspAI	GCGC	4 cut(s)	1140, 1523, 1724, 1830
KspI	CCGCGG	1 cut(s)	500
Kzo9I	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
LmnI	GCTCC	8 cut(s)	361, 809, 964, 1078, 1453, 1689, 1810, 1925
Lsp1109I	GCAGC	7 cut(s)	74, 77, 234, 592, 944, 1940, 2019
LweI	GCATC	3 cut(s)	249, 1428, 1817
MabI	ACCWGGT	1 cut(s)	1131
MaeI	CTAG	6 cut(s)	18, 783, 1041, 1254, 1608, 1674
MaeIII	GTNAC	5 cut(s)	33, 72, 622, 1036, 1895
MalI	GATC	8 cut(s)	203, 632, 938, 1067, 1089, 1307, 1703, 1959
MboI	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
MboII	GAAGA	5 cut(s)	349, 352, 361, 934, 1918
MfeI	CAATTG	3 cut(s)	449, 618, 912
MhlI	GDGCHC	4 cut(s)	110, 1338, 1378, 1599
MluCI	AATT	6 cut(s)	449, 463, 618, 912, 1143, 1474
MlyI	GAGTC	8 cut(s)	389, 499, 608, 1044, 1097, 1331, 1536, 1655
MmeI	TCCRAC	7 cut(s)	511, 591, 1398, 1510, 1653, 1749, 1931
MroXI	GAANNNNTTC	2 cut(s)	353, 1854
MseI	TTAA	2 cut(s)	1874, 2035
MslI	CAYNNNNRTG	1 cut(s)	1461
MspA1I	CMGCKG	2 cut(s)	499, 698
MspI	CCGG	5 cut(s)	244, 267, 365, 563, 1403
MspR9I	CCNGG	6 cut(s)	480, 564, 1133, 1403, 1694, 1699
MunI	CAATTG	3 cut(s)	449, 618, 912
MvaI	CCWGG	4 cut(s)	480, 1133, 1694, 1699
MvnI	CGCG	3 cut(s)	359, 499, 1726
MwoI	GCNNNNNNNGC	8 cut(s)	181, 287, 586, 698, 973, 1243, 1367, 1934
NciI	CCSGG	2 cut(s)	564, 1403
NdeI	CATATG	1 cut(s)	802
NdeII	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
NlaIII	CATG	8 cut(s)	132, 531, 1058, 1301, 1448, 1460, 1513, 1986
NlaIV	GGNNCC	3 cut(s)	363, 1691, 2028
NmuCI	GTSAC	2 cut(s)	33, 1036
NsbI	TGCGCA	1 cut(s)	1831
NspI	RCATGY	1 cut(s)	531
NspV	TTCGAA	3 cut(s)	209, 1169, 1549
PaeR7I	CTCGAG	1 cut(s)	1077
PceI	AGGCCT	1 cut(s)	175
PciI	ACATGT	1 cut(s)	527
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PdmI	GAANNNNTTC	2 cut(s)	353, 1854
PfeI	GAWTC	4 cut(s)	206, 313, 787, 1381
PflMI	CCANNNNNTGG	2 cut(s)	730, 1270
PinAI	ACCGGT	1 cut(s)	266
PkrI	GCNGC	9 cut(s)	64, 67, 249, 289, 582, 700, 934, 1930, 2009
Ple19I	CGATCG	2 cut(s)	204, 939
PleI	GAGTC	8 cut(s)	388, 499, 608, 1043, 1097, 1330, 1536, 1655
PpsI	GAGTC	8 cut(s)	388, 499, 608, 1043, 1097, 1330, 1536, 1655
PscI	ACATGT	1 cut(s)	527
Psp124BI	GAGCTC	1 cut(s)	1338
Psp6I	CCWGG	4 cut(s)	478, 1131, 1692, 1697
PspFI	CCCAGC	2 cut(s)	302, 1370
PspGI	CCWGG	4 cut(s)	478, 1131, 1692, 1697
PspN4I	GGNNCC	3 cut(s)	363, 1691, 2028
PspPI	GGNCC	2 cut(s)	269, 1281
PstNI	CAGNNNCTG	2 cut(s)	586, 1870
PvuI	CGATCG	2 cut(s)	204, 939
RsaI	GTAC	3 cut(s)	709, 1555, 1643
RsaNI	GTAC	3 cut(s)	708, 1554, 1642
RseI	CAYNNNNRTG	1 cut(s)	1461
SacI	GAGCTC	1 cut(s)	1338
SacII	CCGCGG	1 cut(s)	500
SaqAI	TTAA	2 cut(s)	1874, 2035
SatI	GCNGC	9 cut(s)	63, 66, 248, 288, 581, 699, 933, 1929, 2008
Sau3AI	GATC	8 cut(s)	201, 630, 936, 1065, 1087, 1305, 1701, 1957
Sau96I	GGNCC	2 cut(s)	269, 1281
ScaI	AGTACT	2 cut(s)	709, 1643
SchI	GAGTC	8 cut(s)	389, 499, 608, 1044, 1097, 1331, 1536, 1655
ScrFI	CCNGG	6 cut(s)	480, 564, 1133, 1403, 1694, 1699
SduI	GDGCHC	4 cut(s)	110, 1338, 1378, 1599
SexAI	ACCWGGT	1 cut(s)	1131
SfaNI	GCATC	3 cut(s)	249, 1428, 1817
Sfr274I	CTCGAG	1 cut(s)	1077
Sfr303I	CCGCGG	1 cut(s)	500
SfuI	TTCGAA	3 cut(s)	209, 1169, 1549
SgrBI	CCGCGG	1 cut(s)	500
SinI	GGWCC	2 cut(s)	269, 1281
SlaI	CTCGAG	1 cut(s)	1077
SmiMI	CAYNNNNRTG	1 cut(s)	1461
SmlI	CTYRAG	2 cut(s)	154, 1077
SmoI	CTYRAG	2 cut(s)	154, 1077
Sse9I	AATT	6 cut(s)	449, 463, 618, 912, 1143, 1474
SseBI	AGGCCT	1 cut(s)	175
SspMI	CTAG	6 cut(s)	18, 783, 1041, 1254, 1608, 1674
SstI	GAGCTC	1 cut(s)	1338
StuI	AGGCCT	1 cut(s)	175
StyD4I	CCNGG	6 cut(s)	478, 562, 1131, 1401, 1692, 1697
StyI	CCWWGG	3 cut(s)	38, 605, 1683
TaaI	ACNGT	3 cut(s)	602, 1975, 1993
TasI	AATT	6 cut(s)	449, 463, 618, 912, 1143, 1474
TatI	WGTACW	3 cut(s)	707, 1553, 1641
TauI	GCSGC	2 cut(s)	290, 701
TfiI	GAWTC	4 cut(s)	206, 313, 787, 1381
Tru1I	TTAA	2 cut(s)	1874, 2035
Tru9I	TTAA	2 cut(s)	1874, 2035
TscAI	CASTG	5 cut(s)	640, 1021, 1253, 1383, 1894
TseFI	GTSAC	2 cut(s)	33, 1036
TseI	GCWGC	7 cut(s)	62, 65, 247, 580, 932, 1928, 2007
Tsp45I	GTSAC	2 cut(s)	33, 1036
TspDTI	ATGAA	3 cut(s)	702, 1148, 1433
TspGWI	ACGGA	3 cut(s)	504, 1856, 1938
TspRI	CASTG	5 cut(s)	640, 1021, 1253, 1383, 1894
Van91I	CCANNNNNTGG	2 cut(s)	730, 1270
VpaK11BI	GGWCC	2 cut(s)	269, 1281
XapI	RAATTY	1 cut(s)	463
XceI	RCATGY	1 cut(s)	531
XcmI	CCANNNNNNNNNTGG	2 cut(s)	175, 455
XhoI	CTCGAG	1 cut(s)	1077
XmnI	GAANNNNTTC	2 cut(s)	353, 1854
XspI	CTAG	6 cut(s)	18, 783, 1041, 1254, 1608, 1674
ZrmI	AGTACT	2 cut(s)	709, 1643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.