Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0013353

Physical Location & Seq

Genomic Coordinates Forward (+)

15480033 .. 15483430

Gene Structure 3398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG176400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGTTGGCTGGGTGCTCTAGTTCTACACTGTTGTCACCGAGGCATAGATTGAGGAGCGAAGCAGCAGCCCAGTTACAAGCTTGCCATTTCCAGCTACCATCAATGAGCACACAGAGACTCGACTTACCATGCAGCTTTCCTCGAAAGGACTCATCGCGCTCTCAGCCAATTAGGCCTGTGGGTCTTTCCGTGGAGAAGTCATCCATTGATTCGAAGACCGGCACGCGTTCACTGAAGCAGAGTATCCGGCTGCCTCCTCTGGCTACGAGCAGGCCGGCGGCGACTATTCAGGCGGAGGTGAAGGATCAGTTCTGGGAGAAGAGGGGTAAAGCAGGGTTGAAGAGATTTGCGGAGGTTGAGGATGAGGAGGAGGAGGATGAGTCTTGCAGAAACAGAGCCAAGAGGAAGAGGTGTAGCAGTGAAAATGGAGAAGGGGGTGAAAATGGTTTGAGTTTAGGTGAGTTGGGTGGTGGGAATTTTTGGTTTCAGCCTGGTTTTCATGTGCCGAGATCAGTTCAAGCCATCACAGGCATTGATCCTCCTCAGTTTCCGTACACTTTTCCCAACAATCCTTGGTTGCAGTCTGTTGTGACAGAGATCACTGACCTTAAGGAGGGGGAGACTAGCCATGGACCGGTGGGAGAAGCATCCGGGAATTCGAGTACTTCATCGGGGAGCCAGAGCTTGGGTTTGAGGGTGAATGAGAGCGTTTCAGAACCCGAAGGCGGTGTTGGGAGTGGAAATGGTTATAACCCTTATGGAGATGCAGGGGTTGAAGCAGAGGATGAGGAGGAGAGTGAAGTAGAGCACCAGGGGTTTGAGCTTCTCAGCTTGCTTAATGCTTGTGTTGAAGCAATAGGGACGAAGAACATTGCGGCGATTAACCATTTCATAGCGAAATTGGGGGAGCTTGCTTCGCCAAAAGGATCAAATATAAGCAGGCTCACTGCCTATTACACTGAGGCTTTGGCTCTGAGAGTGACCAGGCTTTGGCCGCATGTGTTTCAGATTAGTCCTCCCCGAGAATTCGATCGGGGTGATGACGAGTCTGGAACTGCATTGAGGCTGCTGAACCAGGTTAGTCCTATTCCAAAGTTCCTCCATTTCACTTCAAATGAGATTCTGCTGAGAGCTTTTGAAGGGAAAGACAGGGTTCACATTATAGACTTTGACATCAAGCAGGGGCTGCAATGGCCTAGTTTGTTCCAGAGTTTAGCTTCTAGGACTAACCCTCCCAGCCATGTTAGAATCACCGGAGTAGGGGAGTCAAAGCAGGAGCTCAACGAGACAGGGGATAGGCTAGCTGGATTTGCCGGGGCACTGAACTTGCCTTTTGAGTTCCACCCCGTTGTGGACAGATTGGAAGACGTGAGGCTTTGGATGCTTCATGTGAAGGAGCAAGAATGTGTGGCTGTGAATTGCGCTTTCCAGCTTCACAAGACACTGTATGACGCCACTGGAGGAGCGTTGAGAGACTTCTTGGGATTGATTCGGAGCACAAACCCTGCGGTAGTCCTAATGGCTGAGCAAGAGGCCGAGCACAATGAGCCTAGGTTGGAAGCAAGAGTCTCCAATTCTTTGAGGTACTACTCGGCCATTTTCGACTTGATTGGTTCTAGCCTTCCTTTGGACAGCCCGGCTAGAATCAAAGTAGAAGACACGGTGGCACGTGAGATTCGCAACATTGTTGCTTGTGAGGGAAGCGACAGGGTGGAGAGGCACGAAGGGTTCGAGAAGTGGAGGATGTTGATGGAGCAAGGCGGGTATCGGTGCAATGGGATCACAGATAGGGAGTTTCTTCAGAGCCAGTTTCTGCTGAAGATGTACGAGTGCGAGAATTACGGTGTTAAGAAGCAAGGACATGAGAATGAAGGAGCAGCAGCACTTACTCTAAGTTGGATGGATCAGCCTTTGTACACAGTCTCAGCTTGGACACCGATTGATGTTGCAGGAGGCAGCTCATCGTCGTTTTCACAACCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009966 GO:0009967 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900457 GO:1900459 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

661

Amino Acids

72.91

Weight (kDa)

5.4

Isoelectric Point (pI)

55.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	276 - 645	9.1e-122	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63100 AT1G63100
fragaria_vesca	FvH4_5g01550
malus_domestica	MD04G1066800.v1.1 MD06G1073500.v1.1
prunus_persica	Prupe.5G091700_v2.0.a1
pyrus_communis	pycom04g06010 pycom06g07270
rosa_chinensis	RchiOBHm_Chr7g0199131
rosa_laevigata	RLG00000003812
rosa_multiflora	Rmu_sc0006266.1_g000052
rosa_roxburghii	Rroxscaffold_3G00257050
rosa_rugosa	Rorug07G0052900
rosa_samantha	Rh7AG176400 Rh7BG179900 Rh7CG185500 Rh7DG179400
rosa_wichuraiana	Rw7G015510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
AccB7I	CCANNNNNTGG	2 cut(s)	685, 990
AccII	CGCG	2 cut(s)	157, 226
AciI	CCGC	8 cut(s)	278, 293, 350, 726, 875, 995, 1508, 1761
AclWI	GGATC	5 cut(s)	312, 530, 934, 1787, 1911
AcoI	YGGCCR	2 cut(s)	992, 1593
AcsI	RAATTY	3 cut(s)	475, 655, 1025
AcuI	CTGAAG	3 cut(s)	254, 1784, 1838
AcvI	CACGTG	1 cut(s)	1670
AcyI	GRCGYC	1 cut(s)	1452
AfaI	GTAC	5 cut(s)	554, 664, 1586, 1826, 1916
AfiI	CCNNNNNNNGG	8 cut(s)	613, 634, 685, 725, 990, 1260, 1351, 1627
AflII	CTTAAG	1 cut(s)	608
AflIII	ACRYGT	1 cut(s)	224
AgeI	ACCGGT	1 cut(s)	634
AgsI	TTSAA	6 cut(s)	340, 518, 776, 851, 1113, 1139
AjiI	CACGTC	1 cut(s)	1369
AjnI	CCWGG	4 cut(s)	490, 810, 983, 1074
AjuI	GAANNNNNNNTTGG	2 cut(s)	714, 746
Alw21I	GWGCWC	6 cut(s)	17, 110, 810, 1281, 1499, 1542
Alw26I	GTCTC	6 cut(s)	109, 614, 1280, 1467, 1573, 1927
AlwI	GGATC	5 cut(s)	312, 530, 934, 1787, 1911
AlwNI	CAGNNNCTG	2 cut(s)	1186, 1813
Ama87I	CYCGRG	1 cut(s)	1020
AoxI	GGCC	6 cut(s)	173, 272, 992, 1193, 1533, 1593
ApeKI	GCWGC	9 cut(s)	62, 65, 132, 250, 1066, 1186, 1877, 1880, 1956
ApoI	RAATTY	3 cut(s)	475, 655, 1025
AsiGI	ACCGGT	1 cut(s)	634
AspA2I	CCTAGG	1 cut(s)	1550
AspLEI	GCGC	2 cut(s)	159, 1424
AspS9I	GGNCC	1 cut(s)	632
AsuC2I	CCSGG	3 cut(s)	652, 1315, 1637
AsuHPI	GGTGA	7 cut(s)	27, 310, 449, 470, 709, 1049, 1243
AsuII	TTCGAA	1 cut(s)	212
AsuNHI	GCTAGC	1 cut(s)	1300
AvaI	CYCGRG	1 cut(s)	1020
AvaII	GGWCC	1 cut(s)	632
AvrII	CCTAGG	1 cut(s)	1550
BaeGI	GKGCMC	1 cut(s)	1321
BanII	GRGCYC	1 cut(s)	1281
BbrPI	CACGTG	1 cut(s)	1670
BbsI	GAAGAC	3 cut(s)	221, 1371, 1662
Bbv12I	GWGCWC	6 cut(s)	17, 110, 810, 1281, 1499, 1542
BbvI	GCAGC	9 cut(s)	74, 77, 144, 237, 1053, 1173, 1889, 1892, 1968
BccI	CCATC	4 cut(s)	106, 530, 1744, 1894
BciT130I	CCWGG	4 cut(s)	492, 812, 985, 1076
BciVI	GTATCC	1 cut(s)	254
BcnI	CCSGG	3 cut(s)	652, 1315, 1637
BcoDI	GTCTC	6 cut(s)	109, 614, 1280, 1467, 1573, 1927
BfaI	CTAG	8 cut(s)	18, 624, 1197, 1221, 1301, 1551, 1617, 1641
BfrI	CTTAAG	1 cut(s)	608
BfuI	GTATCC	1 cut(s)	254
BglI	GCCNNNNNGGC	1 cut(s)	172
BlnI	CCTAGG	1 cut(s)	1550
BlpI	GCTNAGC	1 cut(s)	1524
BmcAI	AGTACT	1 cut(s)	664
Bme1390I	CCNGG	7 cut(s)	492, 652, 812, 985, 1076, 1315, 1637
Bme18I	GGWCC	1 cut(s)	632
BmeT110I	CYCGRG	1 cut(s)	1020
BmgBI	CACGTC	1 cut(s)	1369
BmgT120I	GGNCC	1 cut(s)	632
BmiI	GGNNCC	1 cut(s)	677
BmrFI	CCNGG	7 cut(s)	492, 652, 812, 985, 1076, 1315, 1637
BmrI	ACTGGG	1 cut(s)	64
BmsI	GCATC	3 cut(s)	656, 754, 1371
BmtI	GCTAGC	1 cut(s)	1304
BmuI	ACTGGG	1 cut(s)	64
BpiI	GAAGAC	3 cut(s)	221, 1371, 1662
BpmI	CTGGAG	1 cut(s)	1479
Bpu1102I	GCTNAGC	1 cut(s)	1524
Bpu14I	TTCGAA	1 cut(s)	212
BpuMI	CCSGG	3 cut(s)	652, 1315, 1637
BsaAI	YACGTR	1 cut(s)	1670
BsaHI	GRCGYC	1 cut(s)	1452
BsaJI	CCNNGG	7 cut(s)	38, 189, 572, 628, 811, 1314, 1550
BsaWI	WCCGGW	2 cut(s)	634, 1253
BsaXI	ACNNNNNCTCC	4 cut(s)	365, 395, 1216, 1246
Bsc4I	CCNNNNNNNGG	8 cut(s)	613, 634, 685, 725, 990, 1260, 1351, 1627
Bse118I	RCCGGY	3 cut(s)	218, 274, 634
Bse1I	ACTGG	3 cut(s)	70, 1462, 1807
Bse3DI	GCAATG	3 cut(s)	870, 1196, 1780
BseBI	CCWGG	4 cut(s)	492, 812, 985, 1076
BseDI	CCNNGG	7 cut(s)	38, 189, 572, 628, 811, 1314, 1550
BseGI	GGATG	8 cut(s)	200, 367, 382, 647, 790, 1386, 1749, 1905
BseLI	CCNNNNNNNGG	8 cut(s)	613, 634, 685, 725, 990, 1260, 1351, 1627
BseMI	GCAATG	3 cut(s)	870, 1196, 1780
BseMII	CTCAG	8 cut(s)	176, 557, 841, 951, 965, 1118, 1515, 1938
BseNI	ACTGG	3 cut(s)	70, 1462, 1807
BseRI	GAGGAG	9 cut(s)	67, 246, 380, 383, 386, 531, 803, 806, 1476
BseSI	GKGCMC	1 cut(s)	1321
BseXI	GCAGC	9 cut(s)	74, 77, 144, 237, 1053, 1173, 1889, 1892, 1968
BseYI	CCCAGC	2 cut(s)	8, 1235
Bsh1236I	CGCG	2 cut(s)	157, 226
Bsh1285I	CGRYCG	1 cut(s)	1033
BshFI	GGCC	6 cut(s)	175, 274, 994, 1195, 1535, 1595
BshTI	ACCGGT	1 cut(s)	634
BsiEI	CGRYCG	1 cut(s)	1033
BsiHKAI	GWGCWC	6 cut(s)	17, 110, 810, 1281, 1499, 1542
BsiHKCI	CYCGRG	1 cut(s)	1020
BsiSI	CCGG	8 cut(s)	219, 247, 275, 635, 651, 1254, 1314, 1637
BslFI	GGGAC	1 cut(s)	874
BslI	CCNNNNNNNGG	8 cut(s)	613, 634, 685, 725, 990, 1260, 1351, 1627
BsmAI	GTCTC	6 cut(s)	109, 614, 1280, 1467, 1573, 1927
BsmFI	GGGAC	1 cut(s)	874
BsnI	GGCC	6 cut(s)	175, 274, 994, 1195, 1535, 1595
BsoBI	CYCGRG	1 cut(s)	1020
Bsp119I	TTCGAA	1 cut(s)	212
Bsp1286I	GDGCHC	7 cut(s)	17, 110, 810, 1281, 1321, 1499, 1542
Bsp1407I	TGTACA	1 cut(s)	1914
Bsp143I	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
Bsp1720I	GCTNAGC	1 cut(s)	1524
Bsp19I	CCATGG	1 cut(s)	628
BspACI	CCGC	8 cut(s)	278, 293, 350, 726, 875, 995, 1508, 1761
BspANI	GGCC	6 cut(s)	175, 274, 994, 1195, 1535, 1595
BspCNI	CTCAG	8 cut(s)	175, 556, 840, 952, 966, 1119, 1516, 1937
BspFNI	CGCG	2 cut(s)	157, 226
BspLI	GGNNCC	1 cut(s)	677
BspOI	GCTAGC	1 cut(s)	1304
BspPI	GGATC	5 cut(s)	312, 530, 934, 1787, 1911
BspT104I	TTCGAA	1 cut(s)	212
BspTI	CTTAAG	1 cut(s)	608
BsrDI	GCAATG	3 cut(s)	870, 1196, 1780
BsrFI	RCCGGY	3 cut(s)	218, 274, 634
BsrGI	TGTACA	1 cut(s)	1914
BsrI	ACTGG	3 cut(s)	70, 1462, 1807
BssAI	RCCGGY	3 cut(s)	218, 274, 634
BssECI	CCNNGG	7 cut(s)	38, 189, 572, 628, 811, 1314, 1550
BssMI	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
BssNI	GRCGYC	1 cut(s)	1452
BssT1I	CCWWGG	3 cut(s)	572, 628, 1550
Bst2UI	CCWGG	4 cut(s)	492, 812, 985, 1076
Bst4CI	ACNGT	5 cut(s)	30, 1446, 1663, 1844, 1921
Bst6I	CTCTTC	3 cut(s)	314, 335, 401
BstACI	GRCGYC	1 cut(s)	1452
BstAFI	CTTAAG	1 cut(s)	608
BstAPI	GCANNNNNTGC	1 cut(s)	1186
BstAUI	TGTACA	1 cut(s)	1914
BstBAI	YACGTR	1 cut(s)	1670
BstBI	TTCGAA	1 cut(s)	212
BstC8I	GCNNGC	8 cut(s)	82, 224, 272, 276, 833, 912, 941, 1302
BstDEI	CTNAG	9 cut(s)	162, 543, 827, 960, 974, 1127, 1524, 1892, 1924
BstDSI	CCRYGG	2 cut(s)	189, 628
BstENI	CCTNNNNNAGG	1 cut(s)	611
BstF5I	GGATG	8 cut(s)	200, 367, 382, 647, 790, 1386, 1749, 1905
BstFNI	CGCG	2 cut(s)	157, 226
BstHHI	GCGC	2 cut(s)	159, 1424
BstKTI	GATC	8 cut(s)	307, 512, 538, 600, 929, 1033, 1782, 1906
BstMAI	GTCTC	6 cut(s)	109, 614, 1280, 1467, 1573, 1927
BstMBI	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
BstMCI	CGRYCG	1 cut(s)	1033
BstMWI	GCNNNNNNNGC	9 cut(s)	163, 172, 916, 994, 1186, 1192, 1310, 1381, 1546
BstNI	CCWGG	4 cut(s)	492, 812, 985, 1076
BstNSI	RCATGY	1 cut(s)	1001
BstSCI	CCNGG	7 cut(s)	490, 650, 810, 983, 1074, 1313, 1635
BstSLI	GKGCMC	1 cut(s)	1321
BstUI	CGCG	2 cut(s)	157, 226
BstV1I	GCAGC	9 cut(s)	74, 77, 144, 237, 1053, 1173, 1889, 1892, 1968
BstV2I	GAAGAC	3 cut(s)	221, 1371, 1662
BsuI	GTATCC	1 cut(s)	254
BsuRI	GGCC	6 cut(s)	175, 274, 994, 1195, 1535, 1595
BtgI	CCRYGG	2 cut(s)	189, 628
BtgZI	GCGATG	1 cut(s)	138
BtrI	CACGTC	1 cut(s)	1369
BtsCI	GGATG	8 cut(s)	200, 367, 382, 647, 790, 1386, 1749, 1905
BtsI	GCAGTG	2 cut(s)	424, 945
BtsIMutI	CAGTG	9 cut(s)	26, 230, 424, 600, 945, 957, 1319, 1442, 1455
Cac8I	GCNNGC	8 cut(s)	82, 224, 272, 276, 833, 912, 941, 1302
CaiI	CAGNNNCTG	2 cut(s)	1186, 1813
CfoI	GCGC	2 cut(s)	159, 1424
Cfr10I	RCCGGY	3 cut(s)	218, 274, 634
Cfr13I	GGNCC	1 cut(s)	632
CseI	GACGC	1 cut(s)	1460
CsiI	ACCWGGT	1 cut(s)	1074
Csp6I	GTAC	5 cut(s)	553, 663, 1585, 1825, 1915
CspAI	ACCGGT	1 cut(s)	634
CviAII	CATG	7 cut(s)	129, 500, 629, 998, 1241, 1388, 1862
CviQI	GTAC	5 cut(s)	553, 663, 1585, 1825, 1915
DdeI	CTNAG	9 cut(s)	162, 543, 827, 960, 974, 1127, 1524, 1892, 1924
DpnI	GATC	8 cut(s)	306, 511, 537, 599, 928, 1032, 1781, 1905
DpnII	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
EaeI	YGGCCR	2 cut(s)	992, 1593
Eam1104I	CTCTTC	3 cut(s)	314, 335, 401
EarI	CTCTTC	3 cut(s)	314, 335, 401
EciI	GGCGGA	1 cut(s)	308
Ecl136II	GAGCTC	1 cut(s)	1279
Eco130I	CCWWGG	3 cut(s)	572, 628, 1550
Eco147I	AGGCCT	1 cut(s)	175
Eco24I	GRGCYC	1 cut(s)	1281
Eco47I	GGWCC	1 cut(s)	632
Eco53kI	GAGCTC	1 cut(s)	1279
Eco57I	CTGAAG	3 cut(s)	254, 1784, 1838
Eco72I	CACGTG	1 cut(s)	1670
Eco88I	CYCGRG	1 cut(s)	1020
EcoICRI	GAGCTC	1 cut(s)	1279
EcoNI	CCTNNNNNAGG	1 cut(s)	611
EcoRI	GAATTC	2 cut(s)	655, 1025
EcoRII	CCWGG	4 cut(s)	490, 810, 983, 1074
EcoT14I	CCWWGG	3 cut(s)	572, 628, 1550
EcoT38I	GRGCYC	1 cut(s)	1281
ErhI	CCWWGG	3 cut(s)	572, 628, 1550
FaeI	CATG	7 cut(s)	132, 503, 632, 1001, 1244, 1391, 1865
FaqI	GGGAC	1 cut(s)	874
FatI	CATG	7 cut(s)	128, 499, 628, 997, 1240, 1387, 1861
FauI	CCCGC	1 cut(s)	1754
FokI	GGATG	8 cut(s)	187, 374, 389, 634, 797, 1393, 1756, 1912
FriOI	GRGCYC	1 cut(s)	1281
FspBI	CTAG	8 cut(s)	18, 624, 1197, 1221, 1301, 1551, 1617, 1641
GlaI	GCGC	2 cut(s)	158, 1423
GsaI	CCCAGC	2 cut(s)	12, 1239
GsuI	CTGGAG	1 cut(s)	1479
HaeIII	GGCC	6 cut(s)	175, 274, 994, 1195, 1535, 1595
HapII	CCGG	8 cut(s)	219, 247, 275, 635, 651, 1254, 1314, 1637
HgaI	GACGC	1 cut(s)	1460
HhaI	GCGC	2 cut(s)	159, 1424
Hin1I	GRCGYC	1 cut(s)	1452
Hin1II	CATG	7 cut(s)	132, 503, 632, 1001, 1244, 1391, 1865
Hin6I	GCGC	2 cut(s)	157, 1422
HinP1I	GCGC	2 cut(s)	157, 1422
HindIII	AAGCTT	1 cut(s)	78
HpaII	CCGG	8 cut(s)	219, 247, 275, 635, 651, 1254, 1314, 1637
HphI	GGTGA	7 cut(s)	27, 310, 449, 470, 709, 1049, 1243
Hpy166II	GTNNAC	5 cut(s)	230, 555, 1156, 1354, 1917
Hpy188I	TCNGA	5 cut(s)	715, 975, 1008, 1494, 1803
Hpy188III	TCNNGA	3 cut(s)	1050, 1207, 1732
Hpy8I	GTNNAC	5 cut(s)	230, 555, 1156, 1354, 1917
Hpy99I	CGWCG	1 cut(s)	1969
HpyAV	CCTTC	8 cut(s)	295, 425, 716, 1133, 1387, 1631, 1718, 1865
HpyCH4III	ACNGT	5 cut(s)	30, 1446, 1663, 1844, 1921
HpyCH4IV	ACGT	2 cut(s)	1368, 1669
HpyCH4V	TGCA	8 cut(s)	132, 387, 580, 767, 1058, 1189, 1773, 1949
HpyF10VI	GCNNNNNNNGC	9 cut(s)	163, 172, 916, 994, 1186, 1192, 1310, 1381, 1546
HpyF3I	CTNAG	9 cut(s)	162, 543, 827, 960, 974, 1127, 1524, 1892, 1924
HpySE526I	ACGT	2 cut(s)	1368, 1669
Hsp92I	GRCGYC	1 cut(s)	1452
Hsp92II	CATG	7 cut(s)	132, 503, 632, 1001, 1244, 1391, 1865
HspAI	GCGC	2 cut(s)	157, 1422
KroI	GCCGGC	1 cut(s)	274
KroNI	GCCGGC	1 cut(s)	276
Kzo9I	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
LmnI	GCTCC	9 cut(s)	54, 675, 907, 1276, 1396, 1463, 1494, 1753, 1874
Lsp1109I	GCAGC	9 cut(s)	74, 77, 144, 237, 1053, 1173, 1889, 1892, 1968
LweI	GCATC	3 cut(s)	656, 754, 1371
MabI	ACCWGGT	1 cut(s)	1074
MaeI	CTAG	8 cut(s)	18, 624, 1197, 1221, 1301, 1551, 1617, 1641
MaeII	ACGT	2 cut(s)	1368, 1669
MaeIII	GTNAC	4 cut(s)	33, 72, 589, 979
MalI	GATC	8 cut(s)	306, 511, 537, 599, 928, 1032, 1781, 1905
MboI	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
MboII	GAAGA	9 cut(s)	226, 331, 352, 418, 877, 1376, 1667, 1790, 1831
MhlI	GDGCHC	7 cut(s)	17, 110, 810, 1281, 1321, 1499, 1542
MluCI	AATT	8 cut(s)	168, 475, 655, 899, 1025, 1417, 1573, 1837
MluI	ACGCGT	1 cut(s)	224
MlyI	GAGTC	6 cut(s)	111, 143, 389, 1055, 1274, 1575
MmeI	TCCRAC	2 cut(s)	1536, 1877
MroNI	GCCGGC	1 cut(s)	274
MseI	TTAA	5 cut(s)	609, 837, 882, 1848, 1984
MslI	CAYNNNNRTG	1 cut(s)	1866
MspCI	CTTAAG	1 cut(s)	608
MspI	CCGG	8 cut(s)	219, 247, 275, 635, 651, 1254, 1314, 1637
MspR9I	CCNGG	7 cut(s)	492, 652, 812, 985, 1076, 1315, 1637
MvaI	CCWGG	4 cut(s)	492, 812, 985, 1076
MvnI	CGCG	2 cut(s)	157, 226
MwoI	GCNNNNNNNGC	9 cut(s)	163, 172, 916, 994, 1186, 1192, 1310, 1381, 1546
NaeI	GCCGGC	1 cut(s)	276
NciI	CCSGG	3 cut(s)	652, 1315, 1637
NcoI	CCATGG	1 cut(s)	628
NdeII	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
NgoMIV	GCCGGC	1 cut(s)	274
NheI	GCTAGC	1 cut(s)	1300
NlaIII	CATG	7 cut(s)	132, 503, 632, 1001, 1244, 1391, 1865
NlaIV	GGNNCC	1 cut(s)	677
NmeAIII	GCCGAG	3 cut(s)	531, 1561, 1571
NmuCI	GTSAC	3 cut(s)	33, 589, 979
NspI	RCATGY	1 cut(s)	1001
NspV	TTCGAA	1 cut(s)	212
PceI	AGGCCT	1 cut(s)	175
PcsI	WCGNNNNNNNCGW	1 cut(s)	1728
PdiI	GCCGGC	1 cut(s)	276
PfeI	GAWTC	6 cut(s)	209, 1120, 1248, 1489, 1644, 1675
PflMI	CCANNNNNTGG	2 cut(s)	685, 990
PfoI	TCCNGGA	1 cut(s)	650
PinAI	ACCGGT	1 cut(s)	634
Ple19I	CGATCG	1 cut(s)	1033
PleI	GAGTC	6 cut(s)	111, 143, 388, 1054, 1273, 1574
PmaCI	CACGTG	1 cut(s)	1670
PmlI	CACGTG	1 cut(s)	1670
PpsI	GAGTC	6 cut(s)	111, 143, 388, 1054, 1273, 1574
Ppu21I	YACGTR	1 cut(s)	1670
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	1281
Psp6I	CCWGG	4 cut(s)	490, 810, 983, 1074
PspCI	CACGTG	1 cut(s)	1670
PspFI	CCCAGC	2 cut(s)	8, 1235
PspGI	CCWGG	4 cut(s)	490, 810, 983, 1074
PspN4I	GGNNCC	1 cut(s)	677
PspPI	GGNCC	1 cut(s)	632
PstNI	CAGNNNCTG	2 cut(s)	1186, 1813
PvuI	CGATCG	1 cut(s)	1033
RsaI	GTAC	5 cut(s)	554, 664, 1586, 1826, 1916
RsaNI	GTAC	5 cut(s)	553, 663, 1585, 1825, 1915
RseI	CAYNNNNRTG	1 cut(s)	1866
SacI	GAGCTC	1 cut(s)	1281
SaqAI	TTAA	5 cut(s)	609, 837, 882, 1848, 1984
Sau3AI	GATC	8 cut(s)	304, 509, 535, 597, 926, 1030, 1779, 1903
Sau96I	GGNCC	1 cut(s)	632
ScaI	AGTACT	1 cut(s)	664
SchI	GAGTC	6 cut(s)	111, 143, 389, 1055, 1274, 1575
ScrFI	CCNGG	7 cut(s)	492, 652, 812, 985, 1076, 1315, 1637
SduI	GDGCHC	7 cut(s)	17, 110, 810, 1281, 1321, 1499, 1542
SexAI	ACCWGGT	1 cut(s)	1074
SfaNI	GCATC	3 cut(s)	656, 754, 1371
SfuI	TTCGAA	1 cut(s)	212
SinI	GGWCC	1 cut(s)	632
SmiMI	CAYNNNNRTG	1 cut(s)	1866
SmlI	CTYRAG	1 cut(s)	608
SmoI	CTYRAG	1 cut(s)	608
Sse9I	AATT	8 cut(s)	168, 475, 655, 899, 1025, 1417, 1573, 1837
SseBI	AGGCCT	1 cut(s)	175
SsiI	CCGC	8 cut(s)	278, 293, 350, 726, 875, 995, 1508, 1761
SspMI	CTAG	8 cut(s)	18, 624, 1197, 1221, 1301, 1551, 1617, 1641
SstI	GAGCTC	1 cut(s)	1281
StuI	AGGCCT	1 cut(s)	175
StyD4I	CCNGG	7 cut(s)	490, 650, 810, 983, 1074, 1313, 1635
StyI	CCWWGG	3 cut(s)	572, 628, 1550
TaaI	ACNGT	5 cut(s)	30, 1446, 1663, 1844, 1921
TaiI	ACGT	2 cut(s)	1371, 1672
TaqI	TCGA	7 cut(s)	120, 142, 212, 659, 1029, 1602, 1731
TasI	AATT	8 cut(s)	168, 475, 655, 899, 1025, 1417, 1573, 1837
TatI	WGTACW	2 cut(s)	662, 1914
TauI	GCSGC	3 cut(s)	281, 878, 997
TfiI	GAWTC	6 cut(s)	209, 1120, 1248, 1489, 1644, 1675
Tru1I	TTAA	5 cut(s)	609, 837, 882, 1848, 1984
Tru9I	TTAA	5 cut(s)	609, 837, 882, 1848, 1984
TscAI	CASTG	9 cut(s)	33, 237, 424, 607, 952, 964, 1326, 1449, 1462
TseFI	GTSAC	3 cut(s)	33, 589, 979
TseI	GCWGC	9 cut(s)	62, 65, 132, 250, 1066, 1186, 1877, 1880, 1956
Tsp45I	GTSAC	3 cut(s)	33, 589, 979
TspDTI	ATGAA	5 cut(s)	488, 657, 880, 1376, 1884
TspGWI	ACGGA	2 cut(s)	178, 540
TspRI	CASTG	9 cut(s)	33, 237, 424, 607, 952, 964, 1326, 1449, 1462
Van91I	CCANNNNNTGG	2 cut(s)	685, 990
Vha464I	CTTAAG	1 cut(s)	608
VpaK11BI	GGWCC	1 cut(s)	632
XagI	CCTNNNNNAGG	1 cut(s)	611
XapI	RAATTY	3 cut(s)	475, 655, 1025
XceI	RCATGY	1 cut(s)	1001
XmaJI	CCTAGG	1 cut(s)	1550
XspI	CTAG	8 cut(s)	18, 624, 1197, 1221, 1301, 1551, 1617, 1641
ZrmI	AGTACT	1 cut(s)	664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.