Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0009415

Physical Location & Seq

Genomic Coordinates Reverse (-)

30268058 .. 30271310

Gene Structure 3253 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1161800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGCAAGCCAACAACATCTGCCGGCAGCTGCGAAGCAGATTCGGAGGGATAAAAGAACATCATCCGCACCACAATCTGATGATAGTGCATTGGTGAGGCAAATCCGGGACACTCATACTCCGGGAAGATTCGACAGTCACAGCGTCGATGTCAACCAAATTCTCCAAGTCATCGAGGAAATATTTCATCGCACCCCTCATGGCCATGCTGGCGGTTTACTTGGTACTCCAGAACACTTGGATACTGTCGAGGACAGGACCCCATTGTCAAGTGTGGATGTCTTGTTCCATGGATTGTCTTATCTCATACAAAAGATCTACTGCGAGATAACTTGCCAATGCTCAGGCGGCGCTGATGCGCACACGAGTGCAATCGAGTTACTCAGGACCCTTTCGAGTTACCCATGGGAAGCAAAAGTGGCGATAACCCTAGCTGCATATTCTGTGTACTATGGAGAGTTCTGGCTGGTGGTTCAGCTTTGCACTACCGATTCATTAGCCAAGTCCCTGGCCACCCTGAAGCAACTCTCGGACATTGTAGAGCATGCTGACTCGGTAAAACCTCAACTTGAGGCAATCAACAACCTCAACAAGGCGATTCTCAATGTCACCAAGCGCATTGTTGAGTACAGTGAGATGGTCAATATGCAGTCTCAGTACGTTTCAGAAGACAAACCTCCGCTGTCAATTGCCTTGGCGCATATTCCTGCTGCTGCGTATTGGGTCATTCGAGGCATTCTGGCTAGTGCCTCCCATATTGCCATCCTTACTGGCAGTAGGCTCGAGTACGTTGCATCAACCACAGAGGTATGGGAACTGTCAAGCTTGGCTCATAAGCTGAACAACATACACGATCACCTCACGAACGAACTTGAAAATTGTCGCCAACACATTGTGGCGAAGAGATATGATGAAGAATATGAGACTCTGAGACGGCTCTTCCAAAGCCTCCACCTTGATAACCTGAGGAATTTACGTGCACTGATATCACACAGGGATGATATTCAACCTCTCCAAATCGGCACAACCAAGTCGAGGTCTGGTCTTGAAGTGTTGAGGAGAAGGCATGTGTTGCTGCTAATTACAGATCTTAGTCTGAGCAACGAAGAGATTTTAATCCTCGATCACATCTACAAAGATAAGCAGAAAAGGCCGGAAGTTGAGTACGAGTTTGTTTGGATCCCCATGGTGGACACGAATGTTTGGGATGAAGCGAAGCGCTTGAGATTCGAGGACTTGAAGTCAAGGATGCAGTGGTACACAGTTTACGACCCTCAAATCATCGAACCCCCGGTTGTAAAGTTTATCAGAAATGATTGGCAATTTGACAAGAAGATGATCGTAGTGGCATTGGATCCACAAGGGAGGGTGTCCTCTCTGAATGCCATCCACATGCTGTGGATATGGGGCAATGTGGCCTTCCCTTTCACTGATGAGAAAGAGCAACAGCTGTGGAATGCAGAGAGCTGGAGGCTCGAGCTCGTTGCAGACGGCATTGATCAAAGCATACTAGAAGGGATAGAAAAGGGGACATTCGTATGCTTGTATGGAAGCGATGACTTGGATTGGATTCGAAAGTTCACAAACAAAGCGAAAAATGTGGCAAAACTTGCTGGCATCTCCTTGGACTTGGTTTACGTAGGAAGAAGCACCGCAACCAAGGAGAAGATAAGGAAAGTGAACAAGACCATTGAAACAGAGAACCTCAGTCGATGCTGGCCTGAATACACGTCAACCTGGTTCTTCTGGTCCCGAATGGACAGCATGCGGTGCTCAAAGGCGAAACACCACAAGACTCTAGACAATGATAACATACTGAAGGAGGTTATGACATTGCTTAGCTACGACGGAAGTGACCAAGGTTGGGTTATGGTGTGGAGAGGCTCGAATGAGAGGGCTAGGGCCAATGGACACCTCACTCTACTCACTTTGGATGAATTTGATGCATGGAAAGCCGCAGCTGCGGAAAATGGCTTCGTCCCAACACTTCAAGATCAACTCGGACGCCGTCACACGCCACAGCACTGCACTCGTTTGGTCATCCCAGGGTTCGGTCCTGACATACCGGACAGAATAGCGTGCGCTGAGTGCGGCCTCGAGATGGAGAAGTTCTTCATGTTCCGCTGCTGTCTCGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SEO_C SEO_N

Protein Analysis

713

Amino Acids

81.49

Weight (kDa)

6.08

Isoelectric Point (pI)

47.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SEO_N	PF14576	26 - 318	8.3e-96	Sieve element occlusion N-terminus
SEO_C	PF14577	480 - 710	2.5e-87	Sieve element occlusion C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01680
fragaria_vesca	FvH4_5g06500 FvH4_5g06680 FvH4_5g06680 FvH4_5g06680
malus_domestica	MD06G1161800.v1.1 MD14G1167500.v1.1 MD14G1167600.v1.1
prunus_persica	Prupe.5G162100_v2.0.a1
pyrus_communis	pycom06g14460 pycom14g13980
rosa_chinensis	RchiOBHm_Chr7g0191981
rosa_laevigata	RLG00000004412
rosa_multiflora	Rmu_ssc0000421.1_g000030
rosa_roxburghii	Rroxscaffold_3G00263390
rosa_rugosa	Rorug06G0512000 Rorug06G0512100
rosa_samantha	Rh7AG122400 Rh7BG124000 Rh7CG126700 Rh7DG125500
rosa_wichuraiana	Rw7G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	265
Acc16I	TGCGCA	1 cut(s)	360
AclWI	GGATC	4 cut(s)	1174, 1187, 1349, 1362
AcoI	YGGCCR	2 cut(s)	202, 510
AcsI	RAATTY	3 cut(s)	159, 970, 1937
AcuI	CTGAAG	2 cut(s)	539, 1838
AcyI	GRCGYC	1 cut(s)	2005
AdeI	CACNNNGTG	1 cut(s)	895
AfaI	GTAC	7 cut(s)	226, 449, 629, 659, 788, 1166, 1259
AfeI	AGCGCT	1 cut(s)	1220
AfiI	CCNNNNNNNGG	6 cut(s)	592, 1035, 1189, 1864, 2051, 2101
AflIII	ACRYGT	1 cut(s)	1728
AgsI	TTSAA	6 cut(s)	875, 1007, 1049, 1240, 1694, 1991
AhdI	GACNNNNNGTC	1 cut(s)	1240
AjiI	CACGTC	1 cut(s)	1731
AjnI	CCWGG	3 cut(s)	507, 1736, 2044
AleI	CACNNNNGTG	1 cut(s)	366
AloI	GAACNNNNNNTCC	2 cut(s)	269, 301
Alw21I	GWGCWC	3 cut(s)	982, 1482, 1775
Alw26I	GTCTC	4 cut(s)	657, 917, 925, 2135
Alw44I	GTGCAC	1 cut(s)	978
AlwI	GGATC	4 cut(s)	1174, 1187, 1349, 1362
Ama87I	CYCGRG	3 cut(s)	782, 1475, 2096
Aor51HI	AGCGCT	1 cut(s)	1220
AoxI	GGCC	7 cut(s)	202, 510, 1151, 1416, 1718, 1902, 2092
ApaLI	GTGCAC	1 cut(s)	978
ApeKI	GCWGC	9 cut(s)	26, 29, 434, 710, 713, 1075, 1958, 1961, 2124
ApoI	RAATTY	3 cut(s)	159, 970, 1937
Asp700I	GAANNNNTTC	2 cut(s)	183, 2111
AspLEI	GCGC	6 cut(s)	353, 361, 618, 700, 1221, 2084
AspS9I	GGNCC	5 cut(s)	258, 387, 1749, 1902, 2054
AsuC2I	CCSGG	3 cut(s)	107, 123, 1292
AsuHPI	GGTGA	3 cut(s)	106, 601, 848
AsuII	TTCGAA	1 cut(s)	1573
AvaI	CYCGRG	3 cut(s)	782, 1475, 2096
AvaII	GGWCC	4 cut(s)	258, 387, 1749, 2054
AxyI	CCTNAGG	1 cut(s)	965
BaeGI	GKGCMC	1 cut(s)	982
BalI	TGGCCA	2 cut(s)	204, 512
BamHI	GGATCC	2 cut(s)	1179, 1354
BanII	GRGCYC	1 cut(s)	1482
BauI	CACGAG	1 cut(s)	364
BbsI	GAAGAC	1 cut(s)	675
Bbv12I	GWGCWC	3 cut(s)	982, 1482, 1775
BbvI	GCAGC	9 cut(s)	16, 38, 421, 697, 700, 1062, 1948, 1970, 2111
BccI	CCATC	4 cut(s)	631, 770, 1394, 2095
BceAI	ACGGC	3 cut(s)	950, 1507, 1992
BcgI	CGANNNNNNTGC	8 cut(s)	763, 773, 797, 807, 1466, 1500, 2012, 2046
BciT130I	CCWGG	3 cut(s)	509, 1738, 2046
BciVI	GTATCC	1 cut(s)	235
BclI	TGATCA	1 cut(s)	1498
BcnI	CCSGG	3 cut(s)	107, 123, 1292
BcoDI	GTCTC	4 cut(s)	657, 917, 925, 2135
BfaI	CTAG	5 cut(s)	431, 744, 1511, 1799, 1899
BfoI	RGCGCY	2 cut(s)	354, 1222
BfuI	GTATCC	1 cut(s)	235
BglI	GCCNNNNNGGC	1 cut(s)	210
BglII	AGATCT	2 cut(s)	315, 1087
BlpI	GCTNAGC	1 cut(s)	1838
Bme1390I	CCNGG	6 cut(s)	107, 123, 509, 1292, 1738, 2046
Bme18I	GGWCC	4 cut(s)	258, 387, 1749, 2054
BmeRI	GACNNNNNGTC	1 cut(s)	1240
BmeT110I	CYCGRG	3 cut(s)	782, 1475, 2096
BmgBI	CACGTC	1 cut(s)	1731
BmgT120I	GGNCC	5 cut(s)	258, 387, 1749, 1902, 2054
BmiI	GGNNCC	5 cut(s)	260, 389, 1181, 1356, 1751
BmrFI	CCNGG	6 cut(s)	107, 123, 509, 1292, 1738, 2046
BmsI	GCATC	6 cut(s)	346, 803, 1239, 1626, 1703, 1933
BpiI	GAAGAC	1 cut(s)	675
BpmI	CTGGAG	2 cut(s)	213, 1489
Bpu10I	CCTNAGC	1 cut(s)	343
Bpu1102I	GCTNAGC	1 cut(s)	1838
Bpu14I	TTCGAA	1 cut(s)	1573
BpuEI	CTTGAG	2 cut(s)	590, 1243
BpuMI	CCSGG	3 cut(s)	107, 123, 1292
BsaAI	YACGTR	2 cut(s)	977, 1639
BsaBI	GATNNNNATC	1 cut(s)	1115
BsaHI	GRCGYC	1 cut(s)	2005
BsaWI	WCCGGW	1 cut(s)	2065
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	6 cut(s)	592, 1035, 1189, 1864, 2051, 2101
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	1 cut(s)	775
Bse21I	CCTNAGG	1 cut(s)	965
Bse3DI	GCAATG	2 cut(s)	1417, 1832
Bse8I	GATNNNNATC	1 cut(s)	1115
BseBI	CCWGG	3 cut(s)	509, 1738, 2046
BseGI	GGATG	9 cut(s)	62, 283, 762, 1003, 1213, 1254, 1386, 1939, 2040
BseJI	GATNNNNATC	1 cut(s)	1115
BseLI	CCNNNNNNNGG	6 cut(s)	592, 1035, 1189, 1864, 2051, 2101
BseMI	GCAATG	2 cut(s)	1417, 1832
BseMII	CTCAG	8 cut(s)	357, 397, 668, 920, 956, 1088, 1720, 2076
BseNI	ACTGG	1 cut(s)	775
BseRI	GAGGAG	1 cut(s)	1072
BseSI	GKGCMC	1 cut(s)	982
BseXI	GCAGC	9 cut(s)	16, 38, 421, 697, 700, 1062, 1948, 1970, 2111
BsgI	GTGCAG	1 cut(s)	2011
BshFI	GGCC	7 cut(s)	204, 512, 1153, 1418, 1720, 1904, 2094
BsiHKAI	GWGCWC	3 cut(s)	982, 1482, 1775
BsiHKCI	CYCGRG	3 cut(s)	782, 1475, 2096
BsiSI	CCGG	6 cut(s)	23, 106, 122, 1154, 1292, 2066
BslFI	GGGAC	5 cut(s)	122, 490, 1543, 1735, 1964
BslI	CCNNNNNNNGG	6 cut(s)	592, 1035, 1189, 1864, 2051, 2101
BsmAI	GTCTC	4 cut(s)	657, 917, 925, 2135
BsmBI	CGTCTC	1 cut(s)	925
BsmFI	GGGAC	5 cut(s)	122, 490, 1543, 1735, 1964
BsmI	GAATGC	3 cut(s)	735, 1387, 1462
BsnI	GGCC	7 cut(s)	204, 512, 1153, 1418, 1720, 1904, 2094
BsoBI	CYCGRG	3 cut(s)	782, 1475, 2096
Bsp119I	TTCGAA	1 cut(s)	1573
Bsp1286I	GDGCHC	3 cut(s)	982, 1482, 1775
Bsp143I	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
Bsp1720I	GCTNAGC	1 cut(s)	1838
Bsp19I	CCATGG	3 cut(s)	289, 404, 1185
BspANI	GGCC	7 cut(s)	204, 512, 1153, 1418, 1720, 1904, 2094
BspCNI	CTCAG	8 cut(s)	356, 396, 667, 921, 957, 1089, 1719, 2077
BspLI	GGNNCC	5 cut(s)	260, 389, 1181, 1356, 1751
BspPI	GGATC	4 cut(s)	1174, 1187, 1349, 1362
BspQI	GCTCTTC	1 cut(s)	944
BspT104I	TTCGAA	1 cut(s)	1573
BsrDI	GCAATG	2 cut(s)	1417, 1832
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	1 cut(s)	775
BssAI	RCCGGY	1 cut(s)	22
BssMI	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
BssNI	GRCGYC	1 cut(s)	2005
BssSI	CACGAG	1 cut(s)	364
BssT1I	CCWWGG	7 cut(s)	289, 404, 693, 1185, 1623, 1659, 1858
Bst2BI	CACGAG	1 cut(s)	364
Bst2UI	CCWGG	3 cut(s)	509, 1738, 2046
Bst4CI	ACNGT	5 cut(s)	137, 247, 632, 819, 1264
Bst6I	CTCTTC	3 cut(s)	896, 944, 1101
BstACI	GRCGYC	1 cut(s)	2005
BstAPI	GCANNNNNTGC	3 cut(s)	1072, 1610, 1770
BstBAI	YACGTR	2 cut(s)	977, 1639
BstBI	TTCGAA	1 cut(s)	1573
BstC8I	GCNNGC	8 cut(s)	7, 24, 211, 546, 1615, 1718, 1766, 2080
BstDSI	CCRYGG	3 cut(s)	289, 404, 1185
BstENI	CCTNNNNNAGG	1 cut(s)	590
BstF5I	GGATG	9 cut(s)	62, 283, 762, 1003, 1213, 1254, 1386, 1939, 2040
BstH2I	RGCGCY	2 cut(s)	354, 1222
BstHHI	GCGC	6 cut(s)	353, 361, 618, 700, 1221, 2084
BstKTI	GATC	9 cut(s)	318, 856, 1090, 1126, 1182, 1341, 1357, 1501, 1996
BstMAI	GTCTC	4 cut(s)	657, 917, 925, 2135
BstMBI	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
BstNI	CCWGG	3 cut(s)	509, 1738, 2046
BstNSI	RCATGY	4 cut(s)	548, 1070, 1396, 1768
BstSCI	CCNGG	6 cut(s)	105, 121, 507, 1290, 1736, 2044
BstSLI	GKGCMC	1 cut(s)	982
BstSNI	TACGTA	1 cut(s)	1639
BstV1I	GCAGC	9 cut(s)	16, 38, 421, 697, 700, 1062, 1948, 1970, 2111
BstV2I	GAAGAC	1 cut(s)	675
BstX2I	RGATCY	4 cut(s)	315, 1087, 1179, 1354
BstXI	CCANNNNNNTGG	1 cut(s)	508
BstYI	RGATCY	4 cut(s)	315, 1087, 1179, 1354
Bsu36I	CCTNAGG	1 cut(s)	965
BsuI	GTATCC	1 cut(s)	235
BsuRI	GGCC	7 cut(s)	204, 512, 1153, 1418, 1720, 1904, 2094
BtgI	CCRYGG	3 cut(s)	289, 404, 1185
BtgZI	GCGATG	2 cut(s)	173, 1569
BtrI	CACGTC	1 cut(s)	1731
BtsCI	GGATG	9 cut(s)	62, 283, 762, 1003, 1213, 1254, 1386, 1939, 2040
BtsI	GCAGTG	2 cut(s)	1259, 2023
BtsIMutI	CAGTG	5 cut(s)	637, 980, 1259, 1428, 2023
Cac8I	GCNNGC	8 cut(s)	7, 24, 211, 546, 1615, 1718, 1766, 2080
CfoI	GCGC	6 cut(s)	353, 361, 618, 700, 1221, 2084
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	5 cut(s)	258, 387, 1749, 1902, 2054
CseI	GACGC	2 cut(s)	133, 2013
CsiI	ACCWGGT	1 cut(s)	1736
Csp6I	GTAC	7 cut(s)	225, 448, 628, 658, 787, 1165, 1258
CspCI	CAANNNNNGTGG	2 cut(s)	1433, 1468
CviQI	GTAC	7 cut(s)	225, 448, 628, 658, 787, 1165, 1258
DpnI	GATC	9 cut(s)	317, 855, 1089, 1125, 1181, 1340, 1356, 1500, 1995
DpnII	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
DraIII	CACNNNGTG	1 cut(s)	895
DrdI	GACNNNNNNGTC	1 cut(s)	265
DriI	GACNNNNNGTC	1 cut(s)	1240
DseDI	GACNNNNNNGTC	1 cut(s)	265
EaeI	YGGCCR	2 cut(s)	202, 510
Eam1104I	CTCTTC	3 cut(s)	896, 944, 1101
Eam1105I	GACNNNNNGTC	1 cut(s)	1240
EarI	CTCTTC	3 cut(s)	896, 944, 1101
Ecl136II	GAGCTC	1 cut(s)	1480
Eco105I	TACGTA	1 cut(s)	1639
Eco130I	CCWWGG	7 cut(s)	289, 404, 693, 1185, 1623, 1659, 1858
Eco24I	GRGCYC	1 cut(s)	1482
Eco32I	GATATC	1 cut(s)	987
Eco47I	GGWCC	4 cut(s)	258, 387, 1749, 2054
Eco47III	AGCGCT	1 cut(s)	1220
Eco53kI	GAGCTC	1 cut(s)	1480
Eco57I	CTGAAG	2 cut(s)	539, 1838
Eco81I	CCTNAGG	1 cut(s)	965
Eco88I	CYCGRG	3 cut(s)	782, 1475, 2096
EcoICRI	GAGCTC	1 cut(s)	1480
EcoNI	CCTNNNNNAGG	1 cut(s)	590
EcoO109I	RGGNCCY	2 cut(s)	258, 387
EcoRII	CCWGG	3 cut(s)	507, 1736, 2044
EcoRV	GATATC	1 cut(s)	987
EcoT14I	CCWWGG	7 cut(s)	289, 404, 693, 1185, 1623, 1659, 1858
EcoT22I	ATGCAT	1 cut(s)	1948
EcoT38I	GRGCYC	1 cut(s)	1482
ErhI	CCWWGG	7 cut(s)	289, 404, 693, 1185, 1623, 1659, 1858
Esp3I	CGTCTC	1 cut(s)	925
FaqI	GGGAC	5 cut(s)	122, 490, 1543, 1735, 1964
FbaI	TGATCA	1 cut(s)	1498
FokI	GGATG	9 cut(s)	49, 290, 749, 1010, 1220, 1261, 1373, 1946, 2027
FriOI	GRGCYC	1 cut(s)	1482
FspAI	RTGCGCAY	1 cut(s)	360
FspBI	CTAG	5 cut(s)	431, 744, 1511, 1799, 1899
FspI	TGCGCA	1 cut(s)	360
GlaI	GCGC	6 cut(s)	352, 360, 617, 699, 1220, 2083
GsuI	CTGGAG	2 cut(s)	213, 1489
HaeII	RGCGCY	2 cut(s)	354, 1222
HaeIII	GGCC	7 cut(s)	204, 512, 1153, 1418, 1720, 1904, 2094
HapII	CCGG	6 cut(s)	23, 106, 122, 1154, 1292, 2066
HgaI	GACGC	2 cut(s)	133, 2013
HhaI	GCGC	6 cut(s)	353, 361, 618, 700, 1221, 2084
Hin1I	GRCGYC	1 cut(s)	2005
Hin6I	GCGC	6 cut(s)	351, 359, 616, 698, 1219, 2082
HinP1I	GCGC	6 cut(s)	351, 359, 616, 698, 1219, 2082
HincII	GTYRAC	2 cut(s)	154, 1734
HindII	GTYRAC	2 cut(s)	154, 1734
HindIII	AAGCTT	1 cut(s)	823
HinfI	GANTC	9 cut(s)	40, 129, 491, 551, 598, 925, 1227, 1570, 1795
HpaII	CCGG	6 cut(s)	23, 106, 122, 1154, 1292, 2066
HphI	GGTGA	3 cut(s)	106, 601, 848
Hpy188I	TCNGA	9 cut(s)	45, 79, 532, 667, 930, 1098, 1310, 1380, 2003
Hpy99I	CGWCG	2 cut(s)	149, 1850
HpyAV	CCTTC	4 cut(s)	1056, 1429, 1508, 1813
HpyCH4III	ACNGT	5 cut(s)	137, 247, 632, 819, 1264
HpyCH4IV	ACGT	5 cut(s)	660, 789, 976, 1638, 1730
HpySE526I	ACGT	5 cut(s)	660, 789, 976, 1638, 1730
Hsp92I	GRCGYC	1 cut(s)	2005
HspAI	GCGC	6 cut(s)	351, 359, 616, 698, 1219, 2082
KroI	GCCGGC	1 cut(s)	22
KroNI	GCCGGC	1 cut(s)	24
Ksp22I	TGATCA	1 cut(s)	1498
Kzo9I	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
LguI	GCTCTTC	1 cut(s)	944
Lsp1109I	GCAGC	9 cut(s)	16, 38, 421, 697, 700, 1062, 1948, 1970, 2111
LweI	GCATC	6 cut(s)	346, 803, 1239, 1626, 1703, 1933
MabI	ACCWGGT	1 cut(s)	1736
MaeI	CTAG	5 cut(s)	431, 744, 1511, 1799, 1899
MaeII	ACGT	5 cut(s)	660, 789, 976, 1638, 1730
MaeIII	GTNAC	6 cut(s)	137, 378, 398, 607, 1853, 2009
MalI	GATC	9 cut(s)	317, 855, 1089, 1125, 1181, 1340, 1356, 1500, 1995
MboI	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
MfeI	CAATTG	1 cut(s)	687
MflI	RGATCY	4 cut(s)	315, 1087, 1179, 1354
MhlI	GDGCHC	3 cut(s)	982, 1482, 1775
MlsI	TGGCCA	2 cut(s)	204, 512
MluCI	AATT	7 cut(s)	159, 687, 877, 970, 1080, 1322, 1937
MluNI	TGGCCA	2 cut(s)	204, 512
MlyI	GAGTC	3 cut(s)	545, 919, 1789
Mox20I	TGGCCA	2 cut(s)	204, 512
Mph1103I	ATGCAT	1 cut(s)	1948
MroNI	GCCGGC	1 cut(s)	22
MroXI	GAANNNNTTC	2 cut(s)	183, 2111
MscI	TGGCCA	2 cut(s)	204, 512
MseI	TTAA	1 cut(s)	1115
MslI	CAYNNNNRTG	5 cut(s)	204, 366, 996, 1391, 1537
Msp20I	TGGCCA	2 cut(s)	204, 512
MspA1I	CMGCKG	5 cut(s)	29, 682, 1450, 1961, 2124
MspI	CCGG	6 cut(s)	23, 106, 122, 1154, 1292, 2066
MspR9I	CCNGG	6 cut(s)	107, 123, 509, 1292, 1738, 2046
MunI	CAATTG	1 cut(s)	687
Mva1269I	GAATGC	3 cut(s)	735, 1387, 1462
MvaI	CCWGG	3 cut(s)	509, 1738, 2046
NaeI	GCCGGC	1 cut(s)	24
NciI	CCSGG	3 cut(s)	107, 123, 1292
NcoI	CCATGG	3 cut(s)	289, 404, 1185
NdeII	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
NgoMIV	GCCGGC	1 cut(s)	22
NlaIV	GGNNCC	5 cut(s)	260, 389, 1181, 1356, 1751
NmuCI	GTSAC	4 cut(s)	137, 607, 1853, 2009
NsbI	TGCGCA	1 cut(s)	360
NsiI	ATGCAT	1 cut(s)	1948
NspI	RCATGY	4 cut(s)	548, 1070, 1396, 1768
NspV	TTCGAA	1 cut(s)	1573
OliI	CACNNNNGTG	1 cut(s)	366
PaeI	GCATGC	2 cut(s)	548, 1768
PaeR7I	CTCGAG	3 cut(s)	782, 1475, 2096
PasI	CCCWGGG	1 cut(s)	2045
PciSI	GCTCTTC	1 cut(s)	944
PctI	GAATGC	3 cut(s)	735, 1387, 1462
PdiI	GCCGGC	1 cut(s)	24
PdmI	GAANNNNTTC	2 cut(s)	183, 2111
PfeI	GAWTC	6 cut(s)	40, 129, 491, 598, 1227, 1570
PflFI	GACNNNGTC	1 cut(s)	2007
PfoI	TCCNGGA	2 cut(s)	105, 121
PleI	GAGTC	3 cut(s)	545, 919, 1789
PpsI	GAGTC	3 cut(s)	545, 919, 1789
Ppu21I	YACGTR	2 cut(s)	977, 1639
PpuMI	RGGWCCY	2 cut(s)	258, 387
Psp124BI	GAGCTC	1 cut(s)	1482
Psp5II	RGGWCCY	2 cut(s)	258, 387
Psp6I	CCWGG	3 cut(s)	507, 1736, 2044
PspGI	CCWGG	3 cut(s)	507, 1736, 2044
PspN4I	GGNNCC	5 cut(s)	260, 389, 1181, 1356, 1751
PspPI	GGNCC	5 cut(s)	258, 387, 1749, 1902, 2054
PspPPI	RGGWCCY	2 cut(s)	258, 387
PspXI	VCTCGAGB	2 cut(s)	782, 1475
PsuI	RGATCY	4 cut(s)	315, 1087, 1179, 1354
PsyI	GACNNNGTC	1 cut(s)	2007
PvuII	CAGCTG	3 cut(s)	29, 1450, 1961
RsaI	GTAC	7 cut(s)	226, 449, 629, 659, 788, 1166, 1259
RsaNI	GTAC	7 cut(s)	225, 448, 628, 658, 787, 1165, 1258
RseI	CAYNNNNRTG	5 cut(s)	204, 366, 996, 1391, 1537
SacI	GAGCTC	1 cut(s)	1482
SapI	GCTCTTC	1 cut(s)	944
SaqAI	TTAA	1 cut(s)	1115
Sau3AI	GATC	9 cut(s)	315, 853, 1087, 1123, 1179, 1338, 1354, 1498, 1993
Sau96I	GGNCC	5 cut(s)	258, 387, 1749, 1902, 2054
SchI	GAGTC	3 cut(s)	545, 919, 1789
ScrFI	CCNGG	6 cut(s)	107, 123, 509, 1292, 1738, 2046
SduI	GDGCHC	3 cut(s)	982, 1482, 1775
SexAI	ACCWGGT	1 cut(s)	1736
SfaNI	GCATC	6 cut(s)	346, 803, 1239, 1626, 1703, 1933
Sfr274I	CTCGAG	3 cut(s)	782, 1475, 2096
SfuI	TTCGAA	1 cut(s)	1573
SinI	GGWCC	4 cut(s)	258, 387, 1749, 2054
SlaI	CTCGAG	3 cut(s)	782, 1475, 2096
SmiMI	CAYNNNNRTG	5 cut(s)	204, 366, 996, 1391, 1537
SmlI	CTYRAG	5 cut(s)	569, 782, 1222, 1475, 2096
SmoI	CTYRAG	5 cut(s)	569, 782, 1222, 1475, 2096
SnaBI	TACGTA	1 cut(s)	1639
SphI	GCATGC	2 cut(s)	548, 1768
Sse9I	AATT	7 cut(s)	159, 687, 877, 970, 1080, 1322, 1937
SspI	AATATT	1 cut(s)	183
SspMI	CTAG	5 cut(s)	431, 744, 1511, 1799, 1899
SstI	GAGCTC	1 cut(s)	1482
StyD4I	CCNGG	6 cut(s)	105, 121, 507, 1290, 1736, 2044
StyI	CCWWGG	7 cut(s)	289, 404, 693, 1185, 1623, 1659, 1858
TaaI	ACNGT	5 cut(s)	137, 247, 632, 819, 1264
TaiI	ACGT	5 cut(s)	663, 792, 979, 1641, 1733
TaqII	GACCGA	1 cut(s)	2042
TasI	AATT	7 cut(s)	159, 687, 877, 970, 1080, 1322, 1937
TatI	WGTACW	2 cut(s)	447, 627
TauI	GCSGC	3 cut(s)	351, 1958, 2094
TfiI	GAWTC	6 cut(s)	40, 129, 491, 598, 1227, 1570
Tru1I	TTAA	1 cut(s)	1115
Tru9I	TTAA	1 cut(s)	1115
TscAI	CASTG	5 cut(s)	637, 987, 1259, 1435, 2030
TseFI	GTSAC	4 cut(s)	137, 607, 1853, 2009
TseI	GCWGC	9 cut(s)	26, 29, 434, 710, 713, 1075, 1958, 1961, 2124
Tsp45I	GTSAC	4 cut(s)	137, 607, 1853, 2009
TspDTI	ATGAA	6 cut(s)	176, 483, 927, 1224, 1950, 2104
TspGWI	ACGGA	1 cut(s)	1863
TspRI	CASTG	5 cut(s)	637, 987, 1259, 1435, 2030
Tth111I	GACNNNGTC	1 cut(s)	2007
VneI	GTGCAC	1 cut(s)	978
VpaK11BI	GGWCC	4 cut(s)	258, 387, 1749, 2054
XagI	CCTNNNNNAGG	1 cut(s)	590
XapI	RAATTY	3 cut(s)	159, 970, 1937
XbaI	TCTAGA	1 cut(s)	1798
XceI	RCATGY	4 cut(s)	548, 1070, 1396, 1768
XhoI	CTCGAG	3 cut(s)	782, 1475, 2096
XmnI	GAANNNNTTC	2 cut(s)	183, 2111
XspI	CTAG	5 cut(s)	431, 744, 1511, 1799, 1899
Zsp2I	ATGCAT	1 cut(s)	1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.