Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0009415

Physical Location & Seq

Genomic Coordinates Reverse (-)

9216601 .. 9221675

Gene Structure 5075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG124000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCTAGCACCCCACTGAGGCGAGCTCCTACGATGCAAGATGTGATTAGGAGGGACAGAAGAGGATCCATGCAATCTGATGATACTGCATTGGTGAGGCAAATTCGGGAGACTCATACTCCTGGGCGCTCCCACATTGTCGATGTGAAGCCAATTCTCCATGTCATTGATGAAATATTTCATCGGTCTACAGTTGGCACTGATGGCGGCATTCTACTTGGTACCCATGTAGATTCACAGGAGGATAGGACCTATTCGCTGAGTTATGATGTCTTGCTCCAAGGATTGTCTTATCTGATACAAAAGATATATATCGAGATAAGTTGCCAAAGCTTAGCTGGTGCTGATGTGCATACAAGTACAATGGAGTTACTGAGGTCCCTTTCGAACTATTCATGGGAAGCAAAAGTGGTGCTAACCCTCGCCGCCTTTGCTGTGTACTATGGAGAATTCTGGCTTGTGGCTCAGCTTTGTGCTACAGACCCACTAGCCAAGCCTGTGGCCATCCTGAAGCAACTGTCAGACATAATAGAGCATGCAGCCTCGATAAAACCTCAGCTCGAGGCCATTGACAACCTCATCAAGGCAATCACCAAAGTTACGAAGCTCATTGTAGACTATAGCGATATGGTCAAGCTGCAGTCTCAGTACATTTCTGAAGACACACCACCACTGTCAATTGCCACGGCACATATTCCTGCTGCTGCCTATTGGGCCATTCGAGCCATACTGGCTTGTGCCTCACATATTGCTATTCTAACAGGCGGCAGATATGAGTATGTCGCATCAACCACAGAGGTATGGGAACTATCAAGTCTGGCCCATAAGTTGAACAATATACATGAGCATCTCACCACTGAACTTGAGAACTGCCGTCGATATATTGTGGAGAGGAGATATGATGAAGATTACAAGAATCTGATACACCTTTTCCGAAGCCTCCACCTCGACAACATGAAGAACTTACGGGCACTAATTTCCCACAAGGATGATATTCAACCTCTAGTAATTGGGAGAAGCAAAGTGAGGTCCAGTCTTGAAGTACTAAGGAGAAAGCATGTGTTACTACTAATAACTGATCTTAGTCTGAGTTATGAAGAGATTTTGATTCTTGAACACATCCACAACGATCAGCAACATAGGGCAGAAGTTGAGTATGAATTTGTTTGGCTCCCCATCGTGGACGCGGCTGTTTGGGATGAAGCAAAACGAGATAGATTCGAAGATTTGAAGTCAAGGATGCCGTGGTATGCTGTGCACGACCCTTTGATTATTGAACCTCCAGTGATCAAGTTCATCAGAGACTACTGGCATTTTGATAAGAAGATGATCATAGTGTCATTGGATCCACAAGGAAGGGTGGCCTCCGAAAATGCCTTCCACATGCTGTGGATTTGGGGCAATGTGGCTTTCCCATTCTCTGATGAGAGAGAGACAGCACTTTGGAATGCAGAAAGTTGGAGACTCGAGCTCGTTGTTGATGCCATTGATCCAGAAATATTAAAATGGATAGACGCAGGGAAATACATATGCTTGTTTGGAAGTGATGACATCGAGTGGATTAAGAGATTCACACTGAGAGCAAAAGATGTGGCAATACGTGCAGGTATTCCCTTGGAATTGGTTTATGCAGGAAGAAGCACGGCCACCAAAGAGAAACTCCGGAAACTCAACAGAACCATTGATGCTGAGAATCTCAGTCGCACCTGGTCTGATTATACATCCACCTGGTTCTTTTGGTCTCGACTTGACAGCATGAGGTGCTCAAAGGCTAAGCACCACAAGACTGTAGACGATGATCCTATACTGAGAGAGGTCATGACTCTACTTAGCTATGATGGAAGTGACCAAGGTTGGGTTATGGTGTGGAGGGGCTCAGCTGAGACTGTTAGAGCTAATGGACACCTGACTAGCAGCACCCTTGATGACTTTGAGACGTGGAAACCTGCAGCTGCTGAATTAGGCTTTGTGCCTGAACTCAGAAATCAGCTCAAACAGCGCCACCAACCAATTCATTGTACTCGTTTGATCATTCCTGGATTCGGTCCGGACATTCCAGACAGAGTGGTGTGTACCGAGTGTGGTCGTGAGATGGAGAAGTTCTTCATGTTCCGCTGCTGCACCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SEO_C SEO_N

Protein Analysis

709

Amino Acids

81.59

Weight (kDa)

6.05

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SEO_N	PF14576	26 - 315	1.1e-98	Sieve element occlusion N-terminus
SEO_C	PF14577	477 - 708	1.3e-88	Sieve element occlusion C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01680
fragaria_vesca	FvH4_5g06500 FvH4_5g06680 FvH4_5g06680 FvH4_5g06680
malus_domestica	MD06G1161800.v1.1 MD14G1167500.v1.1 MD14G1167600.v1.1
prunus_persica	Prupe.5G162100_v2.0.a1
pyrus_communis	pycom06g14460 pycom14g13980
rosa_chinensis	RchiOBHm_Chr7g0191981
rosa_laevigata	RLG00000004412
rosa_multiflora	Rmu_ssc0000421.1_g000030
rosa_roxburghii	Rroxscaffold_3G00263390
rosa_rugosa	Rorug06G0512000 Rorug06G0512100
rosa_samantha	Rh7AG122400 Rh7BG124000 Rh7CG126700 Rh7DG125500
rosa_wichuraiana	Rw7G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1595, 1954
Acc65I	GGTACC	1 cut(s)	221
AccB1I	GGYRCC	1 cut(s)	221
AccI	GTMKAC	3 cut(s)	188, 615, 1791
AccII	CGCG	1 cut(s)	1187
AccIII	TCCGGA	2 cut(s)	1662, 2047
AciI	CCGC	5 cut(s)	207, 426, 765, 1187, 2113
AclWI	GGATC	6 cut(s)	60, 73, 1340, 1353, 1484, 1793
AcoI	YGGCCR	2 cut(s)	501, 1644
AcsI	RAATTY	3 cut(s)	102, 449, 1160
AcuI	CTGAAG	2 cut(s)	530, 678
AfaI	GTAC	7 cut(s)	223, 361, 440, 650, 1044, 2020, 2074
AfiI	CCNNNNNNNGG	5 cut(s)	18, 583, 1180, 1855, 2042
AgsI	TTSAA	6 cut(s)	832, 998, 1040, 1115, 1231, 1277
AjiI	CACGTC	1 cut(s)	1938
AjnI	CCWGG	4 cut(s)	121, 1706, 1727, 2035
Alw21I	GWGCWC	4 cut(s)	28, 1260, 1473, 1766
Alw26I	GTCTC	8 cut(s)	104, 648, 1296, 1427, 1456, 1746, 1877, 1928
Alw44I	GTGCAC	1 cut(s)	1256
AlwI	GGATC	6 cut(s)	60, 73, 1340, 1353, 1484, 1793
AlwNI	CAGNNNCTG	1 cut(s)	1955
Ama87I	CYCGRG	2 cut(s)	560, 1466
Aor13HI	TCCGGA	2 cut(s)	1662, 2047
AoxI	GGCC	6 cut(s)	501, 564, 714, 819, 1362, 1644
ApaLI	GTGCAC	1 cut(s)	1256
ApeKI	GCWGC	9 cut(s)	539, 637, 701, 704, 1914, 1949, 1952, 2115, 2118
ApoI	RAATTY	3 cut(s)	102, 449, 1160
Asp700I	GAANNNNTTC	2 cut(s)	177, 2102
Asp718I	GGTACC	1 cut(s)	221
AspLEI	GCGC	2 cut(s)	129, 2001
AspS9I	GGNCC	6 cut(s)	249, 378, 714, 820, 1029, 2045
AsuHPI	GGTGA	3 cut(s)	106, 583, 844
AsuII	TTCGAA	2 cut(s)	386, 1221
AsuNHI	GCTAGC	1 cut(s)	5
AvaI	CYCGRG	2 cut(s)	560, 1466
AvaII	GGWCC	4 cut(s)	249, 378, 1029, 2045
BaeGI	GKGCMC	2 cut(s)	973, 1260
BaeI	ACNNNNGTAYC	2 cut(s)	213, 246
BalI	TGGCCA	1 cut(s)	503
BamHI	GGATCC	2 cut(s)	65, 1345
BanI	GGYRCC	1 cut(s)	221
BanII	GRGCYC	3 cut(s)	28, 1473, 1877
BbsI	GAAGAC	1 cut(s)	666
Bbv12I	GWGCWC	4 cut(s)	28, 1260, 1473, 1766
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	9 cut(s)	551, 624, 688, 691, 1926, 1939, 1961, 2102, 2105
BccI	CCATC	5 cut(s)	197, 512, 1184, 1832, 2086
BceAI	ACGGC	4 cut(s)	702, 858, 1228, 1659
BciT130I	CCWGG	4 cut(s)	123, 1708, 1729, 2037
BclI	TGATCA	3 cut(s)	1287, 1329, 2028
BcoDI	GTCTC	8 cut(s)	104, 648, 1296, 1427, 1456, 1746, 1877, 1928
BfaI	CTAG	4 cut(s)	6, 488, 1004, 1911
BfmI	CTRYAG	6 cut(s)	189, 477, 619, 638, 1788, 1947
BfoI	RGCGCY	2 cut(s)	130, 2002
BfuAI	ACCTGC	2 cut(s)	1595, 1954
BglI	GCCNNNNNGGC	2 cut(s)	713, 731
BlpI	GCTNAGC	4 cut(s)	334, 465, 1773, 1876
BmcAI	AGTACT	1 cut(s)	1044
Bme1390I	CCNGG	4 cut(s)	123, 1708, 1729, 2037
Bme18I	GGWCC	4 cut(s)	249, 378, 1029, 2045
BmeT110I	CYCGRG	2 cut(s)	560, 1466
BmgBI	CACGTC	1 cut(s)	1938
BmgT120I	GGNCC	6 cut(s)	249, 378, 714, 820, 1029, 2045
BmiI	GGNNCC	5 cut(s)	67, 223, 380, 1172, 1347
BmrFI	CCNGG	4 cut(s)	123, 1708, 1729, 2037
BmsI	GCATC	6 cut(s)	24, 794, 856, 1230, 1471, 1675
BmtI	GCTAGC	1 cut(s)	9
BpiI	GAAGAC	1 cut(s)	666
BplI	GAGNNNNNCTC	2 cut(s)	10, 42
BpmI	CTGGAG	1 cut(s)	1266
Bpu10I	CCTNAGC	1 cut(s)	555
Bpu1102I	GCTNAGC	4 cut(s)	334, 465, 1773, 1876
Bpu14I	TTCGAA	2 cut(s)	386, 1221
BpuEI	CTTGAG	1 cut(s)	884
BsaAI	YACGTR	1 cut(s)	1601
BsaBI	GATNNNNATC	1 cut(s)	311
BsaI	GGTCTC	1 cut(s)	1746
BsaJI	CCNNGG	6 cut(s)	122, 280, 684, 1244, 1614, 1849
BsaWI	WCCGGW	2 cut(s)	1662, 2047
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	5 cut(s)	18, 583, 1180, 1855, 2042
Bse1I	ACTGG	4 cut(s)	735, 1032, 1283, 1313
Bse3DI	GCAATG	1 cut(s)	1408
Bse8I	GATNNNNATC	1 cut(s)	311
BseAI	TCCGGA	2 cut(s)	1662, 2047
BseBI	CCWGG	4 cut(s)	123, 1708, 1729, 2037
BseDI	CCNNGG	6 cut(s)	122, 280, 684, 1244, 1614, 1849
BseGI	GGATG	6 cut(s)	504, 994, 1119, 1204, 1245, 1721
BseJI	GATNNNNATC	1 cut(s)	311
BseLI	CCNNNNNNNGG	5 cut(s)	18, 583, 1180, 1855, 2042
BseMI	GCAATG	1 cut(s)	1408
BseNI	ACTGG	4 cut(s)	735, 1032, 1283, 1313
BseRI	GAGGAG	1 cut(s)	907
BseSI	GKGCMC	2 cut(s)	973, 1260
BseXI	GCAGC	9 cut(s)	551, 624, 688, 691, 1926, 1939, 1961, 2102, 2105
BsgI	GTGCAG	2 cut(s)	1623, 2104
Bsh1236I	CGCG	1 cut(s)	1187
BshFI	GGCC	6 cut(s)	503, 566, 716, 821, 1364, 1646
BshNI	GGYRCC	1 cut(s)	221
BsiHKAI	GWGCWC	4 cut(s)	28, 1260, 1473, 1766
BsiHKCI	CYCGRG	2 cut(s)	560, 1466
BsiSI	CCGG	2 cut(s)	1663, 2048
BslFI	GGGAC	2 cut(s)	68, 364
BslI	CCNNNNNNNGG	5 cut(s)	18, 583, 1180, 1855, 2042
BsmAI	GTCTC	8 cut(s)	104, 648, 1296, 1427, 1456, 1746, 1877, 1928
BsmBI	CGTCTC	1 cut(s)	1928
BsmFI	GGGAC	2 cut(s)	68, 364
BsmI	GAATGC	2 cut(s)	210, 1453
BsnI	GGCC	6 cut(s)	503, 566, 716, 821, 1364, 1646
Bso31I	GGTCTC	1 cut(s)	1746
BsoBI	CYCGRG	2 cut(s)	560, 1466
Bsp119I	TTCGAA	2 cut(s)	386, 1221
Bsp1286I	GDGCHC	6 cut(s)	28, 973, 1260, 1473, 1766, 1877
Bsp13I	TCCGGA	2 cut(s)	1662, 2047
Bsp143I	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
Bsp1720I	GCTNAGC	4 cut(s)	334, 465, 1773, 1876
BspACI	CCGC	5 cut(s)	207, 426, 765, 1187, 2113
BspANI	GGCC	6 cut(s)	503, 566, 716, 821, 1364, 1646
BspEI	TCCGGA	2 cut(s)	1662, 2047
BspFNI	CGCG	1 cut(s)	1187
BspHI	TCATGA	1 cut(s)	1818
BspLI	GGNNCC	5 cut(s)	67, 223, 380, 1172, 1347
BspMAI	CTGCAG	2 cut(s)	642, 1951
BspMI	ACCTGC	2 cut(s)	1595, 1954
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	6 cut(s)	60, 73, 1340, 1353, 1484, 1793
BspT104I	TTCGAA	2 cut(s)	386, 1221
BspT107I	GGYRCC	1 cut(s)	221
BspTNI	GGTCTC	1 cut(s)	1746
BsrDI	GCAATG	1 cut(s)	1408
BsrI	ACTGG	4 cut(s)	735, 1032, 1283, 1313
BssECI	CCNNGG	6 cut(s)	122, 280, 684, 1244, 1614, 1849
BssMI	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
BssT1I	CCWWGG	3 cut(s)	280, 1614, 1849
Bst2UI	CCWGG	4 cut(s)	123, 1708, 1729, 2037
Bst4CI	ACNGT	5 cut(s)	193, 519, 675, 1789, 1888
Bst6I	CTCTTC	2 cut(s)	55, 1092
BstAPI	GCANNNNNTGC	2 cut(s)	1601, 1761
BstBAI	YACGTR	1 cut(s)	1601
BstBI	TTCGAA	2 cut(s)	386, 1221
BstC8I	GCNNGC	3 cut(s)	7, 24, 537
BstDSI	CCRYGG	2 cut(s)	684, 1244
BstENI	CCTNNNNNAGG	1 cut(s)	581
BstF5I	GGATG	6 cut(s)	504, 994, 1119, 1204, 1245, 1721
BstFNI	CGCG	1 cut(s)	1187
BstH2I	RGCGCY	2 cut(s)	130, 2002
BstHHI	GCGC	2 cut(s)	129, 2001
BstKTI	GATC	9 cut(s)	68, 1081, 1132, 1290, 1332, 1348, 1492, 1801, 2031
BstMAI	GTCTC	8 cut(s)	104, 648, 1296, 1427, 1456, 1746, 1877, 1928
BstMBI	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
BstMWI	GCNNNNNNNGC	8 cut(s)	204, 431, 713, 722, 731, 1601, 1761, 1996
BstNI	CCWGG	4 cut(s)	123, 1708, 1729, 2037
BstNSI	RCATGY	3 cut(s)	539, 1061, 1387
BstSCI	CCNGG	4 cut(s)	121, 1706, 1727, 2035
BstSFI	CTRYAG	6 cut(s)	189, 477, 619, 638, 1788, 1947
BstSLI	GKGCMC	2 cut(s)	973, 1260
BstUI	CGCG	1 cut(s)	1187
BstV1I	GCAGC	9 cut(s)	551, 624, 688, 691, 1926, 1939, 1961, 2102, 2105
BstV2I	GAAGAC	1 cut(s)	666
BstX2I	RGATCY	2 cut(s)	65, 1345
BstXI	CCANNNNNNTGG	1 cut(s)	499
BstYI	RGATCY	2 cut(s)	65, 1345
BsuRI	GGCC	6 cut(s)	503, 566, 716, 821, 1364, 1646
BtgI	CCRYGG	2 cut(s)	684, 1244
BtrI	CACGTC	1 cut(s)	1938
BtsCI	GGATG	6 cut(s)	504, 994, 1119, 1204, 1245, 1721
BtsIMutI	CAGTG	6 cut(s)	14, 198, 671, 855, 1290, 1574
BveI	ACCTGC	2 cut(s)	1595, 1954
Cac8I	GCNNGC	3 cut(s)	7, 24, 537
CaiI	CAGNNNCTG	1 cut(s)	1955
CciI	TCATGA	1 cut(s)	1818
CfoI	GCGC	2 cut(s)	129, 2001
Cfr13I	GGNCC	6 cut(s)	249, 378, 714, 820, 1029, 2045
CpoI	CGGWCCG	1 cut(s)	2045
CseI	GACGC	2 cut(s)	1193, 1523
CsiI	ACCWGGT	2 cut(s)	1706, 1727
Csp6I	GTAC	7 cut(s)	222, 360, 439, 649, 1043, 2019, 2073
CspCI	CAANNNNNGTGG	4 cut(s)	844, 879, 1572, 1607
CspI	CGGWCCG	1 cut(s)	2045
CviQI	GTAC	7 cut(s)	222, 360, 439, 649, 1043, 2019, 2073
DpnI	GATC	9 cut(s)	67, 1080, 1131, 1289, 1331, 1347, 1491, 1800, 2030
DpnII	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
EaeI	YGGCCR	2 cut(s)	501, 1644
Eam1104I	CTCTTC	2 cut(s)	55, 1092
EarI	CTCTTC	2 cut(s)	55, 1092
Ecl136II	GAGCTC	2 cut(s)	26, 1471
Eco130I	CCWWGG	3 cut(s)	280, 1614, 1849
Eco24I	GRGCYC	3 cut(s)	28, 1473, 1877
Eco31I	GGTCTC	1 cut(s)	1746
Eco47I	GGWCC	4 cut(s)	249, 378, 1029, 2045
Eco53kI	GAGCTC	2 cut(s)	26, 1471
Eco57I	CTGAAG	2 cut(s)	530, 678
Eco88I	CYCGRG	2 cut(s)	560, 1466
EcoICRI	GAGCTC	2 cut(s)	26, 1471
EcoNI	CCTNNNNNAGG	1 cut(s)	581
EcoO109I	RGGNCCY	2 cut(s)	249, 378
EcoRI	GAATTC	1 cut(s)	449
EcoRII	CCWGG	4 cut(s)	121, 1706, 1727, 2035
EcoT14I	CCWWGG	3 cut(s)	280, 1614, 1849
EcoT38I	GRGCYC	3 cut(s)	28, 1473, 1877
ErhI	CCWWGG	3 cut(s)	280, 1614, 1849
Esp3I	CGTCTC	1 cut(s)	1928
FaqI	GGGAC	2 cut(s)	68, 364
FauNDI	CATATG	1 cut(s)	1529
FbaI	TGATCA	3 cut(s)	1287, 1329, 2028
FblI	GTMKAC	3 cut(s)	188, 615, 1791
FokI	GGATG	6 cut(s)	491, 1001, 1106, 1211, 1252, 1708
FriOI	GRGCYC	3 cut(s)	28, 1473, 1877
FspBI	CTAG	4 cut(s)	6, 488, 1004, 1911
GlaI	GCGC	2 cut(s)	128, 2000
GsuI	CTGGAG	1 cut(s)	1266
HaeII	RGCGCY	2 cut(s)	130, 2002
HaeIII	GGCC	6 cut(s)	503, 566, 716, 821, 1364, 1646
HapII	CCGG	2 cut(s)	1663, 2048
HgaI	GACGC	2 cut(s)	1193, 1523
HhaI	GCGC	2 cut(s)	129, 2001
Hin6I	GCGC	2 cut(s)	127, 1999
HinP1I	GCGC	2 cut(s)	127, 1999
HindIII	AAGCTT	1 cut(s)	331
HpaII	CCGG	2 cut(s)	1663, 2048
HphI	GGTGA	3 cut(s)	106, 583, 844
Hpy166II	GTNNAC	7 cut(s)	189, 439, 616, 1183, 1258, 1792, 2073
Hpy8I	GTNNAC	7 cut(s)	189, 439, 616, 1183, 1258, 1792, 2073
Hpy99I	CGWCG	1 cut(s)	879
HpyAV	CCTTC	2 cut(s)	1350, 1387
HpyCH4III	ACNGT	5 cut(s)	193, 519, 675, 1789, 1888
HpyCH4IV	ACGT	2 cut(s)	1600, 1937
HpyF10VI	GCNNNNNNNGC	8 cut(s)	204, 431, 713, 722, 731, 1601, 1761, 1996
HpySE526I	ACGT	2 cut(s)	1600, 1937
HspAI	GCGC	2 cut(s)	127, 1999
Kpn2I	TCCGGA	2 cut(s)	1662, 2047
KpnI	GGTACC	1 cut(s)	225
Ksp22I	TGATCA	3 cut(s)	1287, 1329, 2028
Kzo9I	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
LmnI	GCTCC	4 cut(s)	31, 134, 282, 1176
Lsp1109I	GCAGC	9 cut(s)	551, 624, 688, 691, 1926, 1939, 1961, 2102, 2105
LweI	GCATC	6 cut(s)	24, 794, 856, 1230, 1471, 1675
MabI	ACCWGGT	2 cut(s)	1706, 1727
MaeI	CTAG	4 cut(s)	6, 488, 1004, 1911
MaeII	ACGT	2 cut(s)	1600, 1937
MaeIII	GTNAC	4 cut(s)	369, 598, 1062, 1844
MalI	GATC	9 cut(s)	67, 1080, 1131, 1289, 1331, 1347, 1491, 1800, 2030
MboI	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
MboII	GAAGA	9 cut(s)	72, 671, 917, 970, 1109, 1235, 1336, 1647, 2095
MfeI	CAATTG	1 cut(s)	678
MflI	RGATCY	2 cut(s)	65, 1345
MhlI	GDGCHC	6 cut(s)	28, 973, 1260, 1473, 1766, 1877
MlsI	TGGCCA	1 cut(s)	503
MluNI	TGGCCA	1 cut(s)	503
MlyI	GAGTC	3 cut(s)	106, 1458, 1816
MmeI	TCCRAC	1 cut(s)	1439
Mox20I	TGGCCA	1 cut(s)	503
MroI	TCCGGA	2 cut(s)	1662, 2047
MroXI	GAANNNNTTC	2 cut(s)	177, 2102
MscI	TGGCCA	1 cut(s)	503
MseI	TTAA	2 cut(s)	1502, 1563
MslI	CAYNNNNRTG	1 cut(s)	987
Msp20I	TGGCCA	1 cut(s)	503
MspA1I	CMGCKG	3 cut(s)	1880, 1952, 2115
MspI	CCGG	2 cut(s)	1663, 2048
MspR9I	CCNGG	4 cut(s)	123, 1708, 1729, 2037
MunI	CAATTG	1 cut(s)	678
Mva1269I	GAATGC	2 cut(s)	210, 1453
MvaI	CCWGG	4 cut(s)	123, 1708, 1729, 2037
MvnI	CGCG	1 cut(s)	1187
MwoI	GCNNNNNNNGC	8 cut(s)	204, 431, 713, 722, 731, 1601, 1761, 1996
NdeI	CATATG	1 cut(s)	1529
NdeII	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
NheI	GCTAGC	1 cut(s)	5
NlaIV	GGNNCC	5 cut(s)	67, 223, 380, 1172, 1347
NmuCI	GTSAC	1 cut(s)	1844
NspI	RCATGY	3 cut(s)	539, 1061, 1387
NspV	TTCGAA	2 cut(s)	386, 1221
PaeI	GCATGC	1 cut(s)	539
PaeR7I	CTCGAG	2 cut(s)	560, 1466
PagI	TCATGA	1 cut(s)	1818
PctI	GAATGC	2 cut(s)	210, 1453
PdmI	GAANNNNTTC	2 cut(s)	177, 2102
PfeI	GAWTC	7 cut(s)	233, 916, 1108, 1218, 1569, 1693, 2040
PfoI	TCCNGGA	1 cut(s)	2035
PleI	GAGTC	3 cut(s)	106, 1458, 1816
PpsI	GAGTC	3 cut(s)	106, 1458, 1816
Ppu21I	YACGTR	1 cut(s)	1601
PpuMI	RGGWCCY	2 cut(s)	249, 378
Psp124BI	GAGCTC	2 cut(s)	28, 1473
Psp5II	RGGWCCY	2 cut(s)	249, 378
Psp6I	CCWGG	4 cut(s)	121, 1706, 1727, 2035
PspGI	CCWGG	4 cut(s)	121, 1706, 1727, 2035
PspN4I	GGNNCC	5 cut(s)	67, 223, 380, 1172, 1347
PspPI	GGNCC	6 cut(s)	249, 378, 714, 820, 1029, 2045
PspPPI	RGGWCCY	2 cut(s)	249, 378
PspXI	VCTCGAGB	2 cut(s)	560, 1466
PstI	CTGCAG	2 cut(s)	642, 1951
PstNI	CAGNNNCTG	1 cut(s)	1955
PsuI	RGATCY	2 cut(s)	65, 1345
PvuII	CAGCTG	2 cut(s)	1880, 1952
RsaI	GTAC	7 cut(s)	223, 361, 440, 650, 1044, 2020, 2074
RsaNI	GTAC	7 cut(s)	222, 360, 439, 649, 1043, 2019, 2073
RseI	CAYNNNNRTG	1 cut(s)	987
Rsr2I	CGGWCCG	1 cut(s)	2045
RsrII	CGGWCCG	1 cut(s)	2045
SacI	GAGCTC	2 cut(s)	28, 1473
SaqAI	TTAA	2 cut(s)	1502, 1563
Sau3AI	GATC	9 cut(s)	65, 1078, 1129, 1287, 1329, 1345, 1489, 1798, 2028
Sau96I	GGNCC	6 cut(s)	249, 378, 714, 820, 1029, 2045
ScaI	AGTACT	1 cut(s)	1044
SchI	GAGTC	3 cut(s)	106, 1458, 1816
ScrFI	CCNGG	4 cut(s)	123, 1708, 1729, 2037
SduI	GDGCHC	6 cut(s)	28, 973, 1260, 1473, 1766, 1877
SexAI	ACCWGGT	2 cut(s)	1706, 1727
SfaNI	GCATC	6 cut(s)	24, 794, 856, 1230, 1471, 1675
SfcI	CTRYAG	6 cut(s)	189, 477, 619, 638, 1788, 1947
Sfr274I	CTCGAG	2 cut(s)	560, 1466
SfuI	TTCGAA	2 cut(s)	386, 1221
SinI	GGWCC	4 cut(s)	249, 378, 1029, 2045
SlaI	CTCGAG	2 cut(s)	560, 1466
SmiMI	CAYNNNNRTG	1 cut(s)	987
SmlI	CTYRAG	3 cut(s)	560, 863, 1466
SmoI	CTYRAG	3 cut(s)	560, 863, 1466
SphI	GCATGC	1 cut(s)	539
SsiI	CCGC	5 cut(s)	207, 426, 765, 1187, 2113
SspI	AATATT	2 cut(s)	177, 1500
SspMI	CTAG	4 cut(s)	6, 488, 1004, 1911
SstI	GAGCTC	2 cut(s)	28, 1473
StyD4I	CCNGG	4 cut(s)	121, 1706, 1727, 2035
StyI	CCWWGG	3 cut(s)	280, 1614, 1849
TaaI	ACNGT	5 cut(s)	193, 519, 675, 1789, 1888
TaiI	ACGT	2 cut(s)	1603, 1940
TaqII	GACCGA	2 cut(s)	174, 2033
TatI	WGTACW	5 cut(s)	359, 438, 648, 1042, 2018
TauI	GCSGC	4 cut(s)	210, 428, 768, 1190
TfiI	GAWTC	7 cut(s)	233, 916, 1108, 1218, 1569, 1693, 2040
Tru1I	TTAA	2 cut(s)	1502, 1563
Tru9I	TTAA	2 cut(s)	1502, 1563
TscAI	CASTG	6 cut(s)	21, 205, 678, 862, 1290, 1581
TseFI	GTSAC	1 cut(s)	1844
TseI	GCWGC	9 cut(s)	539, 637, 701, 704, 1914, 1949, 1952, 2115, 2118
Tsp45I	GTSAC	1 cut(s)	1844
TspRI	CASTG	6 cut(s)	21, 205, 678, 862, 1290, 1581
VneI	GTGCAC	1 cut(s)	1256
VpaK11BI	GGWCC	4 cut(s)	249, 378, 1029, 2045
XagI	CCTNNNNNAGG	1 cut(s)	581
XapI	RAATTY	3 cut(s)	102, 449, 1160
XceI	RCATGY	3 cut(s)	539, 1061, 1387
XcmI	CCANNNNNNNNNTGG	1 cut(s)	335
XhoI	CTCGAG	2 cut(s)	560, 1466
XmiI	GTMKAC	3 cut(s)	188, 615, 1791
XmnI	GAANNNNTTC	2 cut(s)	177, 2102
XspI	CTAG	4 cut(s)	6, 488, 1004, 1911
ZrmI	AGTACT	1 cut(s)	1044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.