Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000421.1

Orthogroup ID

OG0009415

Physical Location & Seq

Genomic Coordinates Reverse (-)

114448 .. 117972

Gene Structure 3525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000421.1_g000030.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

atgcaaaatgtgattaggagggacagaagaggatccatgcaatctgatgatactgcattggtgaggcaaattcgggagactcatactcctgggcgctccaacattgtcgatgtgaagccaattctccatgtcattgatgaaatatttcatcggtctacagctggcactgatggcggcattctacttggtacccatgtagattcacaggaggataggacctattcactgagttatgatgtcttgctccaaggattgtcttatctgatacaaaagatatatatcgagataagttgccaaagcttagctggtgctgatgtgcatacaagtacaatggagctactgaggtccctttcgaactattcatgggaagcaaaagtggtgctaaccctggccgcctttgctgtgtactatggagaattctggcttgtgtctcagctttgtactacagacccactagccaagcctgtggccatcctgaagcaactgtcagacataatagagcatgcagcctcgataaaacctcagctcgaggccattgacaacctcatcaaggcaatcaccaaagttacgaagctcattgtagactatagcgatatggtcaagctgcagtctcagtacatttctgaagacacaccaccactgtcaattgccacggcacatattcctgctgctgcctattgggccattcgagccatactggcttgtgcctcaaatattgctattctaacaggcggcagatatgagtatgtcgcatcaaccacagaggtatgggaactatcaagtctggcccataagttgaacaatatacatgagcatctcaccactgaacttgagaactgccgtcgatatattgtggagaggagatatgatgaagattacaagaatctgatacaccttttccgaagcctccacctcgacaacatgaagaacttacgggcactaatttcccacaaggatgatattcaacctctagtaattgggagaagcaaagtgaggttcagtcttgaagtactgaggagaaagcatgtgttactactaataactgatcttagtctgagttatgaagagattttgattcttgaacacatccacaacgatcagcaacatagggcagaagttgagtatgaatttgtttggctccccatcgtggacgcggctgtttgggatgaagcaaaacgagatagattcgaagatttgaagtcaaggatgccgtggtatgctgtgcacgaccctttgattattgaacccccagtgatcaagttcatcagagactactggcattttgataagaagatgatcatagtgtcattggatccacaaggaagggtgtcctccgaaaatgcctaccacatgctgtggatttggggcaatgtggctttcccattctctgatgagagagagacagcactttggaatgcagaaagttggagactcgagctcgtcgttgatgccattgatccagaaatattaaaatggatagacgctgggaaatacatatgcttgtttggaagtgatgacatcgagtggattaagagattcacactgagagcaaaagatgtggcaatacgtgcagatattcccttggaattggtttatgcaggaagaagcacggccaccaaagagaaactccggaaactcaacagaaccattgatgctgagaatctcagtcgcacctggtctgattatacatccacctggttcttttggtctcgacttgacagcatgaggtgctcaaaggctaagcaccacatgactgtagacaatgatcctatactgagagaggtcatgactctacttagctatgatggaagtgaccaaggttgggttatggtgtggaggggctcagctgagactgttagagctaatggacacctgactagcagcacccttgatgactttgagaaatggaaaagtgcggctgctgatttaggctttgtgcctgaactcagaaatcagctcaaacagcgccaccaaccaattcattgtactcgtttgatcattcctggattcggtccggacattccagacagagtggtgtgtaccgagtgtggtcgtgagatggagaagttcttcatgttccgctgctgcaccgattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SEO_C SEO_N

Protein Analysis

698

Amino Acids

80.54

Weight (kDa)

5.94

Isoelectric Point (pI)

44.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01680
fragaria_vesca	FvH4_5g06500 FvH4_5g06680 FvH4_5g06680 FvH4_5g06680
malus_domestica	MD06G1161800.v1.1 MD14G1167500.v1.1 MD14G1167600.v1.1
prunus_persica	Prupe.5G162100_v2.0.a1
pyrus_communis	pycom06g14460 pycom14g13980
rosa_chinensis	RchiOBHm_Chr7g0191981
rosa_laevigata	RLG00000004412
rosa_multiflora	Rmu_ssc0000421.1_g000030
rosa_roxburghii	Rroxscaffold_3G00263390
rosa_rugosa	Rorug06G0512000 Rorug06G0512100
rosa_samantha	Rh7AG122400 Rh7BG124000 Rh7CG126700 Rh7DG125500
rosa_wichuraiana	Rw7G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	188
AccB1I	GGYRCC	1 cut(s)	188
AccI	GTMKAC	3 cut(s)	155, 582, 1758
AccII	CGCG	1 cut(s)	1154
AccIII	TCCGGA	2 cut(s)	1629, 2014
AciI	CCGC	6 cut(s)	174, 393, 732, 1154, 1916, 2080
AclWI	GGATC	6 cut(s)	27, 40, 1307, 1320, 1451, 1760
AcoI	YGGCCR	3 cut(s)	390, 468, 1611
AcsI	RAATTY	3 cut(s)	69, 416, 1127
AcuI	CTGAAG	2 cut(s)	497, 645
AfaI	GTAC	8 cut(s)	190, 328, 407, 442, 617, 1011, 1987, 2041
AfiI	CCNNNNNNNGG	4 cut(s)	550, 1147, 1822, 2009
AgsI	TTSAA	6 cut(s)	799, 965, 1007, 1082, 1198, 1244
AjnI	CCWGG	5 cut(s)	88, 387, 1673, 1694, 2002
Alw21I	GWGCWC	3 cut(s)	1227, 1440, 1733
Alw26I	GTCTC	8 cut(s)	71, 435, 615, 1263, 1394, 1423, 1713, 1844
Alw44I	GTGCAC	1 cut(s)	1223
AlwI	GGATC	6 cut(s)	27, 40, 1307, 1320, 1451, 1760
Ama87I	CYCGRG	2 cut(s)	527, 1433
Aor13HI	TCCGGA	2 cut(s)	1629, 2014
AoxI	GGCC	6 cut(s)	390, 468, 531, 681, 786, 1611
ApaLI	GTGCAC	1 cut(s)	1223
ApeKI	GCWGC	8 cut(s)	506, 604, 668, 671, 1881, 1919, 2082, 2085
ApoI	RAATTY	3 cut(s)	69, 416, 1127
Asp700I	GAANNNNTTC	2 cut(s)	144, 2069
Asp718I	GGTACC	1 cut(s)	188
AspLEI	GCGC	2 cut(s)	96, 1968
AspS9I	GGNCC	5 cut(s)	216, 345, 681, 787, 2012
AsuHPI	GGTGA	3 cut(s)	73, 550, 811
AsuII	TTCGAA	2 cut(s)	353, 1188
AvaI	CYCGRG	2 cut(s)	527, 1433
AvaII	GGWCC	3 cut(s)	216, 345, 2012
BaeGI	GKGCMC	2 cut(s)	940, 1227
BaeI	ACNNNNGTAYC	2 cut(s)	180, 213
BalI	TGGCCA	1 cut(s)	470
BamHI	GGATCC	2 cut(s)	32, 1312
BanI	GGYRCC	1 cut(s)	188
BanII	GRGCYC	2 cut(s)	1440, 1844
BbsI	GAAGAC	1 cut(s)	633
Bbv12I	GWGCWC	3 cut(s)	1227, 1440, 1733
BbvCI	CCTCAGC	1 cut(s)	522
BbvI	GCAGC	8 cut(s)	518, 591, 655, 658, 1893, 1906, 2069, 2072
BccI	CCATC	5 cut(s)	164, 479, 1151, 1799, 2053
BceAI	ACGGC	4 cut(s)	669, 825, 1195, 1626
BciT130I	CCWGG	5 cut(s)	90, 389, 1675, 1696, 2004
BclI	TGATCA	3 cut(s)	1254, 1296, 1995
BcoDI	GTCTC	8 cut(s)	71, 435, 615, 1263, 1394, 1423, 1713, 1844
BfaI	CTAG	3 cut(s)	455, 971, 1878
BfmI	CTRYAG	5 cut(s)	156, 444, 586, 605, 1755
BfoI	RGCGCY	2 cut(s)	97, 1969
BglI	GCCNNNNNGGC	2 cut(s)	680, 698
BlpI	GCTNAGC	3 cut(s)	301, 1740, 1843
BmcAI	AGTACT	1 cut(s)	1011
Bme1390I	CCNGG	5 cut(s)	90, 389, 1675, 1696, 2004
Bme18I	GGWCC	3 cut(s)	216, 345, 2012
BmeT110I	CYCGRG	2 cut(s)	527, 1433
BmgT120I	GGNCC	5 cut(s)	216, 345, 681, 787, 2012
BmiI	GGNNCC	5 cut(s)	34, 190, 347, 1139, 1314
BmrFI	CCNGG	5 cut(s)	90, 389, 1675, 1696, 2004
BmrI	ACTGGG	1 cut(s)	1244
BmsI	GCATC	5 cut(s)	761, 823, 1197, 1438, 1642
BmuI	ACTGGG	1 cut(s)	1244
BpiI	GAAGAC	1 cut(s)	633
Bpu10I	CCTNAGC	1 cut(s)	522
Bpu1102I	GCTNAGC	3 cut(s)	301, 1740, 1843
Bpu14I	TTCGAA	2 cut(s)	353, 1188
BpuEI	CTTGAG	1 cut(s)	851
BsaAI	YACGTR	1 cut(s)	1568
BsaBI	GATNNNNATC	1 cut(s)	278
BsaI	GGTCTC	1 cut(s)	1713
BsaJI	CCNNGG	7 cut(s)	89, 247, 387, 651, 1211, 1581, 1816
BsaWI	WCCGGW	2 cut(s)	1629, 2014
BsaXI	ACNNNNNCTCC	2 cut(s)	70, 100
Bsc4I	CCNNNNNNNGG	4 cut(s)	550, 1147, 1822, 2009
Bse1I	ACTGG	3 cut(s)	702, 1250, 1280
Bse3DI	GCAATG	1 cut(s)	1375
Bse8I	GATNNNNATC	1 cut(s)	278
BseAI	TCCGGA	2 cut(s)	1629, 2014
BseBI	CCWGG	5 cut(s)	90, 389, 1675, 1696, 2004
BseDI	CCNNGG	7 cut(s)	89, 247, 387, 651, 1211, 1581, 1816
BseGI	GGATG	6 cut(s)	471, 961, 1086, 1171, 1212, 1688
BseJI	GATNNNNATC	1 cut(s)	278
BseLI	CCNNNNNNNGG	4 cut(s)	550, 1147, 1822, 2009
BseMI	GCAATG	1 cut(s)	1375
BseNI	ACTGG	3 cut(s)	702, 1250, 1280
BseRI	GAGGAG	2 cut(s)	874, 1030
BseSI	GKGCMC	2 cut(s)	940, 1227
BseXI	GCAGC	8 cut(s)	518, 591, 655, 658, 1893, 1906, 2069, 2072
BseYI	CCCAGC	1 cut(s)	1484
BsgI	GTGCAG	2 cut(s)	1590, 2071
Bsh1236I	CGCG	1 cut(s)	1154
BshFI	GGCC	6 cut(s)	392, 470, 533, 683, 788, 1613
BshNI	GGYRCC	1 cut(s)	188
BsiHKAI	GWGCWC	3 cut(s)	1227, 1440, 1733
BsiHKCI	CYCGRG	2 cut(s)	527, 1433
BsiSI	CCGG	2 cut(s)	1630, 2015
BslFI	GGGAC	2 cut(s)	35, 331
BslI	CCNNNNNNNGG	4 cut(s)	550, 1147, 1822, 2009
BsmAI	GTCTC	8 cut(s)	71, 435, 615, 1263, 1394, 1423, 1713, 1844
BsmFI	GGGAC	2 cut(s)	35, 331
BsmI	GAATGC	2 cut(s)	177, 1420
BsnI	GGCC	6 cut(s)	392, 470, 533, 683, 788, 1613
Bso31I	GGTCTC	1 cut(s)	1713
BsoBI	CYCGRG	2 cut(s)	527, 1433
Bsp119I	TTCGAA	2 cut(s)	353, 1188
Bsp1286I	GDGCHC	5 cut(s)	940, 1227, 1440, 1733, 1844
Bsp13I	TCCGGA	2 cut(s)	1629, 2014
Bsp143I	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
Bsp1720I	GCTNAGC	3 cut(s)	301, 1740, 1843
BspACI	CCGC	6 cut(s)	174, 393, 732, 1154, 1916, 2080
BspANI	GGCC	6 cut(s)	392, 470, 533, 683, 788, 1613
BspEI	TCCGGA	2 cut(s)	1629, 2014
BspFNI	CGCG	1 cut(s)	1154
BspHI	TCATGA	1 cut(s)	1785
BspLI	GGNNCC	5 cut(s)	34, 190, 347, 1139, 1314
BspMAI	CTGCAG	1 cut(s)	609
BspPI	GGATC	6 cut(s)	27, 40, 1307, 1320, 1451, 1760
BspT104I	TTCGAA	2 cut(s)	353, 1188
BspT107I	GGYRCC	1 cut(s)	188
BspTNI	GGTCTC	1 cut(s)	1713
BsrDI	GCAATG	1 cut(s)	1375
BsrI	ACTGG	3 cut(s)	702, 1250, 1280
BssECI	CCNNGG	7 cut(s)	89, 247, 387, 651, 1211, 1581, 1816
BssMI	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
BssT1I	CCWWGG	3 cut(s)	247, 1581, 1816
Bst2UI	CCWGG	5 cut(s)	90, 389, 1675, 1696, 2004
Bst4CI	ACNGT	4 cut(s)	486, 642, 1756, 1855
Bst6I	CTCTTC	2 cut(s)	22, 1059
BstAPI	GCANNNNNTGC	2 cut(s)	1568, 1728
BstBAI	YACGTR	1 cut(s)	1568
BstBI	TTCGAA	2 cut(s)	353, 1188
BstC8I	GCNNGC	2 cut(s)	163, 504
BstDSI	CCRYGG	2 cut(s)	651, 1211
BstENI	CCTNNNNNAGG	1 cut(s)	548
BstF5I	GGATG	6 cut(s)	471, 961, 1086, 1171, 1212, 1688
BstFNI	CGCG	1 cut(s)	1154
BstH2I	RGCGCY	2 cut(s)	97, 1969
BstHHI	GCGC	2 cut(s)	96, 1968
BstKTI	GATC	9 cut(s)	35, 1048, 1099, 1257, 1299, 1315, 1459, 1768, 1998
BstMAI	GTCTC	8 cut(s)	71, 435, 615, 1263, 1394, 1423, 1713, 1844
BstMBI	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
BstMWI	GCNNNNNNNGC	8 cut(s)	171, 398, 680, 689, 698, 1568, 1728, 1963
BstNI	CCWGG	5 cut(s)	90, 389, 1675, 1696, 2004
BstNSI	RCATGY	3 cut(s)	506, 1028, 1354
BstSCI	CCNGG	5 cut(s)	88, 387, 1673, 1694, 2002
BstSFI	CTRYAG	5 cut(s)	156, 444, 586, 605, 1755
BstSLI	GKGCMC	2 cut(s)	940, 1227
BstUI	CGCG	1 cut(s)	1154
BstV1I	GCAGC	8 cut(s)	518, 591, 655, 658, 1893, 1906, 2069, 2072
BstV2I	GAAGAC	1 cut(s)	633
BstX2I	RGATCY	2 cut(s)	32, 1312
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	2 cut(s)	32, 1312
BsuRI	GGCC	6 cut(s)	392, 470, 533, 683, 788, 1613
BtgI	CCRYGG	2 cut(s)	651, 1211
BtsCI	GGATG	6 cut(s)	471, 961, 1086, 1171, 1212, 1688
BtsIMutI	CAGTG	6 cut(s)	165, 224, 638, 822, 1257, 1541
Cac8I	GCNNGC	2 cut(s)	163, 504
CciI	TCATGA	1 cut(s)	1785
CfoI	GCGC	2 cut(s)	96, 1968
Cfr13I	GGNCC	5 cut(s)	216, 345, 681, 787, 2012
CpoI	CGGWCCG	1 cut(s)	2012
CseI	GACGC	2 cut(s)	1160, 1490
CsiI	ACCWGGT	2 cut(s)	1673, 1694
Csp6I	GTAC	8 cut(s)	189, 327, 406, 441, 616, 1010, 1986, 2040
CspCI	CAANNNNNGTGG	4 cut(s)	811, 846, 1539, 1574
CspI	CGGWCCG	1 cut(s)	2012
CviQI	GTAC	8 cut(s)	189, 327, 406, 441, 616, 1010, 1986, 2040
DpnI	GATC	9 cut(s)	34, 1047, 1098, 1256, 1298, 1314, 1458, 1767, 1997
DpnII	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
EaeI	YGGCCR	3 cut(s)	390, 468, 1611
Eam1104I	CTCTTC	2 cut(s)	22, 1059
EarI	CTCTTC	2 cut(s)	22, 1059
Ecl136II	GAGCTC	1 cut(s)	1438
Eco130I	CCWWGG	3 cut(s)	247, 1581, 1816
Eco24I	GRGCYC	2 cut(s)	1440, 1844
Eco31I	GGTCTC	1 cut(s)	1713
Eco47I	GGWCC	3 cut(s)	216, 345, 2012
Eco53kI	GAGCTC	1 cut(s)	1438
Eco57I	CTGAAG	2 cut(s)	497, 645
Eco88I	CYCGRG	2 cut(s)	527, 1433
EcoICRI	GAGCTC	1 cut(s)	1438
EcoNI	CCTNNNNNAGG	1 cut(s)	548
EcoO109I	RGGNCCY	2 cut(s)	216, 345
EcoRI	GAATTC	1 cut(s)	416
EcoRII	CCWGG	5 cut(s)	88, 387, 1673, 1694, 2002
EcoT14I	CCWWGG	3 cut(s)	247, 1581, 1816
EcoT38I	GRGCYC	2 cut(s)	1440, 1844
ErhI	CCWWGG	3 cut(s)	247, 1581, 1816
FaqI	GGGAC	2 cut(s)	35, 331
FauNDI	CATATG	1 cut(s)	1496
FbaI	TGATCA	3 cut(s)	1254, 1296, 1995
FblI	GTMKAC	3 cut(s)	155, 582, 1758
FokI	GGATG	6 cut(s)	458, 968, 1073, 1178, 1219, 1675
FriOI	GRGCYC	2 cut(s)	1440, 1844
FspBI	CTAG	3 cut(s)	455, 971, 1878
GlaI	GCGC	2 cut(s)	95, 1967
GsaI	CCCAGC	1 cut(s)	1488
HaeII	RGCGCY	2 cut(s)	97, 1969
HaeIII	GGCC	6 cut(s)	392, 470, 533, 683, 788, 1613
HapII	CCGG	2 cut(s)	1630, 2015
HgaI	GACGC	2 cut(s)	1160, 1490
HhaI	GCGC	2 cut(s)	96, 1968
Hin6I	GCGC	2 cut(s)	94, 1966
HinP1I	GCGC	2 cut(s)	94, 1966
HindIII	AAGCTT	1 cut(s)	298
HpaII	CCGG	2 cut(s)	1630, 2015
HphI	GGTGA	3 cut(s)	73, 550, 811
Hpy166II	GTNNAC	7 cut(s)	156, 406, 583, 1150, 1225, 1759, 2040
Hpy8I	GTNNAC	7 cut(s)	156, 406, 583, 1150, 1225, 1759, 2040
Hpy99I	CGWCG	2 cut(s)	846, 1445
HpyAV	CCTTC	1 cut(s)	1317
HpyCH4III	ACNGT	4 cut(s)	486, 642, 1756, 1855
HpyCH4IV	ACGT	1 cut(s)	1567
HpyF10VI	GCNNNNNNNGC	8 cut(s)	171, 398, 680, 689, 698, 1568, 1728, 1963
HpySE526I	ACGT	1 cut(s)	1567
HspAI	GCGC	2 cut(s)	94, 1966
Kpn2I	TCCGGA	2 cut(s)	1629, 2014
KpnI	GGTACC	1 cut(s)	192
Ksp22I	TGATCA	3 cut(s)	1254, 1296, 1995
Kzo9I	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
LmnI	GCTCC	4 cut(s)	101, 249, 334, 1143
Lsp1109I	GCAGC	8 cut(s)	518, 591, 655, 658, 1893, 1906, 2069, 2072
LweI	GCATC	5 cut(s)	761, 823, 1197, 1438, 1642
MabI	ACCWGGT	2 cut(s)	1673, 1694
MaeI	CTAG	3 cut(s)	455, 971, 1878
MaeII	ACGT	1 cut(s)	1567
MaeIII	GTNAC	3 cut(s)	565, 1029, 1811
MalI	GATC	9 cut(s)	34, 1047, 1098, 1256, 1298, 1314, 1458, 1767, 1997
MboI	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
MboII	GAAGA	9 cut(s)	39, 638, 884, 937, 1076, 1202, 1303, 1614, 2062
MfeI	CAATTG	1 cut(s)	645
MflI	RGATCY	2 cut(s)	32, 1312
MhlI	GDGCHC	5 cut(s)	940, 1227, 1440, 1733, 1844
MlsI	TGGCCA	1 cut(s)	470
MluCI	AATT	9 cut(s)	69, 120, 416, 645, 942, 975, 1127, 1586, 1977
MluNI	TGGCCA	1 cut(s)	470
MlyI	GAGTC	3 cut(s)	73, 1425, 1783
MmeI	TCCRAC	2 cut(s)	123, 1406
Mox20I	TGGCCA	1 cut(s)	470
MroI	TCCGGA	2 cut(s)	1629, 2014
MroXI	GAANNNNTTC	2 cut(s)	144, 2069
MscI	TGGCCA	1 cut(s)	470
MseI	TTAA	2 cut(s)	1469, 1530
MslI	CAYNNNNRTG	1 cut(s)	954
Msp20I	TGGCCA	1 cut(s)	470
MspA1I	CMGCKG	3 cut(s)	161, 1847, 2082
MspI	CCGG	2 cut(s)	1630, 2015
MspR9I	CCNGG	5 cut(s)	90, 389, 1675, 1696, 2004
MunI	CAATTG	1 cut(s)	645
Mva1269I	GAATGC	2 cut(s)	177, 1420
MvaI	CCWGG	5 cut(s)	90, 389, 1675, 1696, 2004
MvnI	CGCG	1 cut(s)	1154
MwoI	GCNNNNNNNGC	8 cut(s)	171, 398, 680, 689, 698, 1568, 1728, 1963
NdeI	CATATG	1 cut(s)	1496
NdeII	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
NlaIV	GGNNCC	5 cut(s)	34, 190, 347, 1139, 1314
NmuCI	GTSAC	1 cut(s)	1811
NspI	RCATGY	3 cut(s)	506, 1028, 1354
NspV	TTCGAA	2 cut(s)	353, 1188
PaeI	GCATGC	1 cut(s)	506
PaeR7I	CTCGAG	2 cut(s)	527, 1433
PagI	TCATGA	1 cut(s)	1785
PcsI	WCGNNNNNNNCGW	1 cut(s)	1440
PctI	GAATGC	2 cut(s)	177, 1420
PdmI	GAANNNNTTC	2 cut(s)	144, 2069
PfeI	GAWTC	7 cut(s)	200, 883, 1075, 1185, 1536, 1660, 2007
PfoI	TCCNGGA	1 cut(s)	2002
PleI	GAGTC	3 cut(s)	73, 1425, 1783
PpsI	GAGTC	3 cut(s)	73, 1425, 1783
Ppu21I	YACGTR	1 cut(s)	1568
PpuMI	RGGWCCY	2 cut(s)	216, 345
Psp124BI	GAGCTC	1 cut(s)	1440
Psp5II	RGGWCCY	2 cut(s)	216, 345
Psp6I	CCWGG	5 cut(s)	88, 387, 1673, 1694, 2002
PspFI	CCCAGC	1 cut(s)	1484
PspGI	CCWGG	5 cut(s)	88, 387, 1673, 1694, 2002
PspN4I	GGNNCC	5 cut(s)	34, 190, 347, 1139, 1314
PspPI	GGNCC	5 cut(s)	216, 345, 681, 787, 2012
PspPPI	RGGWCCY	2 cut(s)	216, 345
PspXI	VCTCGAGB	2 cut(s)	527, 1433
PstI	CTGCAG	1 cut(s)	609
PsuI	RGATCY	2 cut(s)	32, 1312
PvuII	CAGCTG	2 cut(s)	161, 1847
RsaI	GTAC	8 cut(s)	190, 328, 407, 442, 617, 1011, 1987, 2041
RsaNI	GTAC	8 cut(s)	189, 327, 406, 441, 616, 1010, 1986, 2040
RseI	CAYNNNNRTG	1 cut(s)	954
Rsr2I	CGGWCCG	1 cut(s)	2012
RsrII	CGGWCCG	1 cut(s)	2012
SacI	GAGCTC	1 cut(s)	1440
SaqAI	TTAA	2 cut(s)	1469, 1530
Sau3AI	GATC	9 cut(s)	32, 1045, 1096, 1254, 1296, 1312, 1456, 1765, 1995
Sau96I	GGNCC	5 cut(s)	216, 345, 681, 787, 2012
ScaI	AGTACT	1 cut(s)	1011
SchI	GAGTC	3 cut(s)	73, 1425, 1783
ScrFI	CCNGG	5 cut(s)	90, 389, 1675, 1696, 2004
SduI	GDGCHC	5 cut(s)	940, 1227, 1440, 1733, 1844
SexAI	ACCWGGT	2 cut(s)	1673, 1694
SfaNI	GCATC	5 cut(s)	761, 823, 1197, 1438, 1642
SfcI	CTRYAG	5 cut(s)	156, 444, 586, 605, 1755
Sfr274I	CTCGAG	2 cut(s)	527, 1433
SfuI	TTCGAA	2 cut(s)	353, 1188
SinI	GGWCC	3 cut(s)	216, 345, 2012
SlaI	CTCGAG	2 cut(s)	527, 1433
SmiMI	CAYNNNNRTG	1 cut(s)	954
SmlI	CTYRAG	3 cut(s)	527, 830, 1433
SmoI	CTYRAG	3 cut(s)	527, 830, 1433
SphI	GCATGC	1 cut(s)	506
Sse9I	AATT	9 cut(s)	69, 120, 416, 645, 942, 975, 1127, 1586, 1977
SsiI	CCGC	6 cut(s)	174, 393, 732, 1154, 1916, 2080
SspI	AATATT	3 cut(s)	144, 715, 1467
SspMI	CTAG	3 cut(s)	455, 971, 1878
SstI	GAGCTC	1 cut(s)	1440
StyD4I	CCNGG	5 cut(s)	88, 387, 1673, 1694, 2002
StyI	CCWWGG	3 cut(s)	247, 1581, 1816
TaaI	ACNGT	4 cut(s)	486, 642, 1756, 1855
TaiI	ACGT	1 cut(s)	1570
TaqII	GACCGA	2 cut(s)	141, 2000
TasI	AATT	9 cut(s)	69, 120, 416, 645, 942, 975, 1127, 1586, 1977
TatI	WGTACW	6 cut(s)	326, 405, 440, 615, 1009, 1985
TauI	GCSGC	5 cut(s)	177, 395, 735, 1157, 1919
TfiI	GAWTC	7 cut(s)	200, 883, 1075, 1185, 1536, 1660, 2007
Tru1I	TTAA	2 cut(s)	1469, 1530
Tru9I	TTAA	2 cut(s)	1469, 1530
TscAI	CASTG	6 cut(s)	172, 231, 645, 829, 1257, 1548
TseFI	GTSAC	1 cut(s)	1811
TseI	GCWGC	8 cut(s)	506, 604, 668, 671, 1881, 1919, 2082, 2085
Tsp45I	GTSAC	1 cut(s)	1811
TspRI	CASTG	6 cut(s)	172, 231, 645, 829, 1257, 1548
VneI	GTGCAC	1 cut(s)	1223
VpaK11BI	GGWCC	3 cut(s)	216, 345, 2012
XagI	CCTNNNNNAGG	1 cut(s)	548
XapI	RAATTY	3 cut(s)	69, 416, 1127
XceI	RCATGY	3 cut(s)	506, 1028, 1354
XcmI	CCANNNNNNNNNTGG	1 cut(s)	302
XhoI	CTCGAG	2 cut(s)	527, 1433
XmiI	GTMKAC	3 cut(s)	155, 582, 1758
XmnI	GAANNNNTTC	2 cut(s)	144, 2069
XspI	CTAG	3 cut(s)	455, 971, 1878
ZrmI	AGTACT	1 cut(s)	1011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.