Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0015002

Physical Location & Seq

Genomic Coordinates Reverse (-)

32033701 .. 32035290

Gene Structure 1590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1180900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGGCGGTAATGGCAAGCACAGGTGGAAGATCTCCTTCTACCGCTCCAATTCCGGCTCAAAGAATCCCCCAAAGGAGCTCTTATGCCCCATTTCCGGGTCCTTAATATCCGACCCTGTCGTCGTCTCTTCGGGTCAGACCTTCGAGCGCCTCTCCGTCCAACTCTGCCGCGAGCTGGGCTTTTCCCCCAAACTCGAAGACGGGACCCGACCCGATTTCTCCACCGTGATTCCCAATTTTGCCATCAAGTCTACCATCCAGAACTGGTGCGACCGCAACAACGCCCAACACCCGCAGCCACCCGATTCAATCGCACTCGAGAAGGCCGTACGGGCGCTGATGGAGAAGGATAGGGAAGACCCAGGAATTAGGGTTTCGGAGCGGGAGCTGCTGAGGGGGATGGCGGAGAGGCCGCCGGTTAGGTACATGCACGCGGCGACCGAGTTGGGCTGCCGAGTCGACCATTTCTACTCCAGTTCGTCGGAAGAGTCAGTGGTCATCCCCTCGGCGAGTCCCCCCACTCCTCTTCCCTTCGCGACCCGGCCGTCGTGTTACTCCTCGTCGTCTTCCTCCGAAATCACAGCGGAGCTTCAAACCCTAAATCTTAATTCCTCGTTGCCGGGATGCGAGGAGGAGGAGCAATTGATGACAAAGCTGAGAAGCTCCGAGGTAATTGAGCAGGAGGAGGGGGTAATTTTACTCAGAAAGCTCACGAGGACGAAAGAGGAGCTTAGGATTTCGCTCTGCACTCCCCGGCTGCTCTCCGCCGTCGGATCGCTGGTTGTCTCGCGATACAGCACCGTGCAGCAAAACGCCCTCGCTTCGCTGGTGAACTTGTCTCTGGAGAAGGCCAACAAGGTGAAGATTGTACGGTCAGGATTCGTCCCGCATTTGGTGGATGTATTGAAGGGAGGATCCAGTGAGTCGCAGGAGCACGCCGCTGGCGCGCTCTTCAGCTTGGCGTTGGAGGAAGATAACAAGATGGCGATCGGAGTGCTCGGCGCGTTGCCTCCGCTGATGCACGCGTTCGTAAGGGCGGAGAGTGAGCGGACGCGCAATGACTCGGCGTTGGCGCTCTATCACTTGACGCTGGTGGAGAGCAACCGAGTCAAACTCGTTAAGCAACACAACGCGGTGCAAACTCTGTTGGCCTTGGCTAAGTCCCCGGCGTCAGCGGGCCGAGTTCTGCTGATTCTGTGCAATCTAGCGAGCTGCAACGAGGGGAGGTCCTCCATGCTCGACGCCAACGCGGTGGAGTGTTTGGTGGGGATGCTGAGGAGGCGAACCGAGTTTGATTCCGAGTCGACTCGGGAGAACTGTGTGGCGGCGCTCTATGCGCTGAGTCACGGGTCGATGAGGTTTCGTGGGCTGGCGAGGGAGGCGAAGGCGGTGGAGGTGTTGAGTGAGATCGAGAAGAGCGGGAGCGAGAGGGCGAGGGAGAAGGCCAACCGGCTGTTGATGGTGATGAGAGGGAGAGAGGATGAGCCAAATTGGGACTCGGTGTTGGACTCGGGTTCCGGACCTGGACTCGATCCGACTCGGTACCGAGTTGTGAGGAACTTGCATACCGCCAACTCAACCACGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

530

Amino Acids

58.08

Weight (kDa)

7.97

Isoelectric Point (pI)

57.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	24 - 93	4.3e-08	U-box domain
ARM_PUB	PF25598	265 - 490	2.1e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	272 - 472	4.4e-14	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65200
fragaria_vesca	FvH4_5g16420
malus_domestica	MD06G1180900.v1.1 MD14G1186000.v1.1
prunus_persica	Prupe.5G178900_v2.0.a1
pyrus_communis	pycom06g16000 pycom14g15480
rosa_chinensis	RchiOBHm_Chr7g0179681
rosa_laevigata	RLG00000005331
rosa_multiflora	Rmu_sc0005329.1_g000033
rosa_roxburghii	Rroxscaffold_155G00443810 Rroxscaffold_3G00273550
rosa_rugosa	Rorug06G0427300
rosa_samantha	Rh7BG025900 Rh7DG027500
rosa_wichuraiana	Rw7G002150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	119, 544
Acc65I	GGTACC	1 cut(s)	1542
AccB1I	GGYRCC	1 cut(s)	1542
AccBSI	CCGCTC	4 cut(s)	45, 382, 1048, 1419
AccI	GTMKAC	3 cut(s)	251, 459, 1304
AccIII	TCCGGA	1 cut(s)	1517
AclWI	GGATC	4 cut(s)	781, 909, 922, 1526
AcoI	YGGCCR	1 cut(s)	542
AcuI	CTGAAG	1 cut(s)	937
AcyI	GRCGYC	2 cut(s)	1169, 1242
AfaI	GTAC	4 cut(s)	330, 425, 870, 1544
AfiI	CCNNNNNNNGG	4 cut(s)	95, 96, 175, 892
AflIII	ACRYGT	1 cut(s)	1023
AgsI	TTSAA	3 cut(s)	309, 593, 907
AjnI	CCWGG	2 cut(s)	361, 1522
Alw21I	GWGCWC	3 cut(s)	81, 936, 999
Alw26I	GTCTC	3 cut(s)	130, 790, 843
AlwI	GGATC	4 cut(s)	781, 909, 922, 1526
Ama87I	CYCGRG	3 cut(s)	317, 1308, 1510
Aor13HI	TCCGGA	1 cut(s)	1517
AoxI	GGCC	7 cut(s)	324, 410, 542, 849, 1149, 1177, 1443
ApeKI	GCWGC	6 cut(s)	295, 388, 450, 757, 805, 1212
Asp718I	GGTACC	1 cut(s)	1542
AspLEI	GCGC	9 cut(s)	150, 337, 947, 949, 1004, 1056, 1075, 1330, 1339
AspS9I	GGNCC	5 cut(s)	99, 204, 1177, 1227, 1520
AsuC2I	CCSGG	5 cut(s)	97, 541, 621, 754, 1166
AsuHPI	GGTGA	3 cut(s)	841, 871, 1474
AvaI	CYCGRG	3 cut(s)	317, 1308, 1510
AvaII	GGWCC	4 cut(s)	99, 204, 1227, 1520
BamHI	GGATCC	1 cut(s)	914
BanI	GGYRCC	1 cut(s)	1542
BanII	GRGCYC	1 cut(s)	81
BauI	CACGAG	1 cut(s)	712
BbsI	GAAGAC	3 cut(s)	204, 363, 558
Bbv12I	GWGCWC	3 cut(s)	81, 936, 999
BbvCI	CCTCAGC	2 cut(s)	392, 1274
BbvI	GCAGC	6 cut(s)	307, 375, 437, 744, 817, 1199
BccI	CCATC	6 cut(s)	251, 263, 334, 394, 976, 1453
BceAI	ACGGC	3 cut(s)	311, 529, 752
BcgI	CGANNNNNNTGC	2 cut(s)	976, 1010
BciT130I	CCWGG	2 cut(s)	363, 1524
BcnI	CCSGG	5 cut(s)	97, 541, 621, 754, 1166
BcoDI	GTCTC	3 cut(s)	130, 790, 843
BfaI	CTAG	1 cut(s)	1205
BfoI	RGCGCY	4 cut(s)	151, 338, 1076, 1331
BglI	GCCNNNNNGGC	1 cut(s)	332
BglII	AGATCT	1 cut(s)	30
Bme1390I	CCNGG	7 cut(s)	97, 363, 541, 621, 754, 1166, 1524
Bme18I	GGWCC	4 cut(s)	99, 204, 1227, 1520
BmeT110I	CYCGRG	3 cut(s)	317, 1308, 1510
BmgT120I	GGNCC	5 cut(s)	99, 204, 1177, 1227, 1520
BmiI	GGNNCC	6 cut(s)	100, 205, 206, 916, 1516, 1544
BmrFI	CCNGG	7 cut(s)	97, 363, 541, 621, 754, 1166, 1524
BmsI	GCATC	3 cut(s)	614, 1008, 1260
BpiI	GAAGAC	3 cut(s)	204, 363, 558
BplI	GAGNNNNNCTC	4 cut(s)	137, 169, 1098, 1130
BpmI	CTGGAG	2 cut(s)	457, 863
Bpu10I	CCTNAGC	3 cut(s)	392, 731, 1274
BpuMI	CCSGG	5 cut(s)	97, 541, 621, 754, 1166
BsaBI	GATNNNNATC	1 cut(s)	986
BsaHI	GRCGYC	2 cut(s)	1169, 1242
BsaJI	CCNNGG	6 cut(s)	361, 504, 666, 752, 1152, 1164
BsaWI	WCCGGW	1 cut(s)	1517
Bsc4I	CCNNNNNNNGG	4 cut(s)	95, 96, 175, 892
Bse118I	RCCGGY	2 cut(s)	415, 1449
Bse1I	ACTGG	3 cut(s)	269, 474, 918
Bse3DI	GCAATG	1 cut(s)	1063
Bse8I	GATNNNNATC	1 cut(s)	986
BseAI	TCCGGA	1 cut(s)	1517
BseBI	CCWGG	2 cut(s)	363, 1524
BseDI	CCNNGG	6 cut(s)	361, 504, 666, 752, 1152, 1164
BseGI	GGATG	7 cut(s)	255, 405, 498, 629, 904, 1275, 1486
BseJI	GATNNNNATC	1 cut(s)	986
BseLI	CCNNNNNNNGG	4 cut(s)	95, 96, 175, 892
BseMI	GCAATG	1 cut(s)	1063
BseMII	CTCAG	5 cut(s)	383, 647, 715, 1265, 1331
BseNI	ACTGG	3 cut(s)	269, 474, 918
BsePI	GCGCGC	1 cut(s)	945
BseRI	GAGGAG	8 cut(s)	513, 547, 644, 647, 650, 698, 740, 1291
BseX3I	CGGCCG	1 cut(s)	542
BseXI	GCAGC	6 cut(s)	307, 375, 437, 744, 817, 1199
BseYI	CCCAGC	1 cut(s)	175
BsgI	GTGCAG	2 cut(s)	730, 824
Bsh1285I	CGRYCG	4 cut(s)	274, 441, 545, 990
BshFI	GGCC	7 cut(s)	326, 412, 544, 851, 1151, 1179, 1445
BshNI	GGYRCC	1 cut(s)	1542
BsiEI	CGRYCG	4 cut(s)	274, 441, 545, 990
BsiHKAI	GWGCWC	3 cut(s)	81, 936, 999
BsiHKCI	CYCGRG	3 cut(s)	317, 1308, 1510
BsiSI	CCGG	9 cut(s)	54, 96, 416, 541, 620, 754, 1166, 1450, 1518
BsiWI	CGTACG	1 cut(s)	328
BslFI	GGGAC	5 cut(s)	217, 498, 869, 1147, 1508
BslI	CCNNNNNNNGG	4 cut(s)	95, 96, 175, 892
BsmAI	GTCTC	3 cut(s)	130, 790, 843
BsmBI	CGTCTC	1 cut(s)	130
BsmFI	GGGAC	5 cut(s)	217, 498, 869, 1147, 1508
BsnI	GGCC	7 cut(s)	326, 412, 544, 851, 1151, 1179, 1445
BsoBI	CYCGRG	3 cut(s)	317, 1308, 1510
Bsp1286I	GDGCHC	3 cut(s)	81, 936, 999
Bsp13I	TCCGGA	1 cut(s)	1517
Bsp143I	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
Bsp68I	TCGCGA	2 cut(s)	536, 790
BspANI	GGCC	7 cut(s)	326, 412, 544, 851, 1151, 1179, 1445
BspCNI	CTCAG	5 cut(s)	384, 648, 714, 1266, 1332
BspEI	TCCGGA	1 cut(s)	1517
BspLI	GGNNCC	6 cut(s)	100, 205, 206, 916, 1516, 1544
BspPI	GGATC	4 cut(s)	781, 909, 922, 1526
BspQI	GCTCTTC	2 cut(s)	956, 1409
BspT107I	GGYRCC	1 cut(s)	1542
BsrBI	CCGCTC	4 cut(s)	45, 382, 1048, 1419
BsrDI	GCAATG	1 cut(s)	1063
BsrFI	RCCGGY	2 cut(s)	415, 1449
BsrI	ACTGG	3 cut(s)	269, 474, 918
BssAI	RCCGGY	2 cut(s)	415, 1449
BssECI	CCNNGG	6 cut(s)	361, 504, 666, 752, 1152, 1164
BssHII	GCGCGC	1 cut(s)	945
BssMI	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
BssNI	GRCGYC	2 cut(s)	1169, 1242
BssSI	CACGAG	1 cut(s)	712
BssT1I	CCWWGG	1 cut(s)	1152
Bst2BI	CACGAG	1 cut(s)	712
Bst2UI	CCWGG	2 cut(s)	363, 1524
Bst4CI	ACNGT	4 cut(s)	226, 802, 873, 1319
Bst6I	CTCTTC	5 cut(s)	133, 480, 531, 956, 1409
BstACI	GRCGYC	2 cut(s)	1169, 1242
BstDEI	CTNAG	7 cut(s)	392, 656, 701, 731, 1158, 1274, 1340
BstF5I	GGATG	7 cut(s)	255, 405, 498, 629, 904, 1275, 1486
BstH2I	RGCGCY	4 cut(s)	151, 338, 1076, 1331
BstHHI	GCGC	9 cut(s)	150, 337, 947, 949, 1004, 1056, 1075, 1330, 1339
BstKTI	GATC	6 cut(s)	33, 776, 917, 990, 1410, 1534
BstMAI	GTCTC	3 cut(s)	130, 790, 843
BstMBI	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
BstMCI	CGRYCG	4 cut(s)	274, 441, 545, 990
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 177, 332, 388, 944, 1279, 1334, 1336, 1379
BstNI	CCWGG	2 cut(s)	363, 1524
BstNSI	RCATGY	1 cut(s)	430
BstSCI	CCNGG	7 cut(s)	95, 361, 539, 619, 752, 1164, 1522
BstV1I	GCAGC	6 cut(s)	307, 375, 437, 744, 817, 1199
BstV2I	GAAGAC	3 cut(s)	204, 363, 558
BstX2I	RGATCY	2 cut(s)	30, 914
BstXI	CCANNNNNNTGG	1 cut(s)	1252
BstYI	RGATCY	2 cut(s)	30, 914
BstZI	CGGCCG	1 cut(s)	542
BsuRI	GGCC	7 cut(s)	326, 412, 544, 851, 1151, 1179, 1445
BtsCI	GGATG	7 cut(s)	255, 405, 498, 629, 904, 1275, 1486
BtsIMutI	CAGTG	2 cut(s)	498, 925
BtuMI	TCGCGA	2 cut(s)	536, 790
CfoI	GCGC	9 cut(s)	150, 337, 947, 949, 1004, 1056, 1075, 1330, 1339
Cfr10I	RCCGGY	2 cut(s)	415, 1449
Cfr13I	GGNCC	5 cut(s)	99, 204, 1177, 1227, 1520
CseI	GACGC	4 cut(s)	1060, 1096, 1158, 1250
Csp6I	GTAC	4 cut(s)	329, 424, 869, 1543
CviAII	CATG	2 cut(s)	427, 1234
CviQI	GTAC	4 cut(s)	329, 424, 869, 1543
DdeI	CTNAG	7 cut(s)	392, 656, 701, 731, 1158, 1274, 1340
DpnI	GATC	6 cut(s)	32, 775, 916, 989, 1409, 1533
DpnII	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
DrdI	GACNNNNNNGTC	2 cut(s)	119, 544
DseDI	GACNNNNNNGTC	2 cut(s)	119, 544
EaeI	YGGCCR	1 cut(s)	542
EagI	CGGCCG	1 cut(s)	542
Eam1104I	CTCTTC	5 cut(s)	133, 480, 531, 956, 1409
EarI	CTCTTC	5 cut(s)	133, 480, 531, 956, 1409
EciI	GGCGGA	3 cut(s)	419, 754, 1052
Ecl136II	GAGCTC	1 cut(s)	79
EclXI	CGGCCG	1 cut(s)	542
Eco130I	CCWWGG	1 cut(s)	1152
Eco24I	GRGCYC	1 cut(s)	81
Eco47I	GGWCC	4 cut(s)	99, 204, 1227, 1520
Eco52I	CGGCCG	1 cut(s)	542
Eco53kI	GAGCTC	1 cut(s)	79
Eco57I	CTGAAG	1 cut(s)	937
Eco88I	CYCGRG	3 cut(s)	317, 1308, 1510
EcoICRI	GAGCTC	1 cut(s)	79
EcoO109I	RGGNCCY	3 cut(s)	99, 204, 1227
EcoRII	CCWGG	2 cut(s)	361, 1522
EcoT14I	CCWWGG	1 cut(s)	1152
EcoT38I	GRGCYC	1 cut(s)	81
ErhI	CCWWGG	1 cut(s)	1152
Esp3I	CGTCTC	1 cut(s)	130
FaeI	CATG	2 cut(s)	430, 1237
FaiI	YATR	5 cut(s)	85, 428, 1235, 1335, 1566
FalI	AAGNNNNNCTT	6 cut(s)	20, 52, 65, 97, 714, 746
FaqI	GGGAC	5 cut(s)	217, 498, 869, 1147, 1508
FatI	CATG	2 cut(s)	426, 1233
FauI	CCCGC	5 cut(s)	300, 375, 894, 1168, 1412
FblI	GTMKAC	3 cut(s)	251, 459, 1304
FokI	GGATG	7 cut(s)	242, 412, 485, 636, 911, 1282, 1493
FriOI	GRGCYC	1 cut(s)	81
FspBI	CTAG	1 cut(s)	1205
GlaI	GCGC	9 cut(s)	149, 336, 946, 948, 1003, 1055, 1074, 1329, 1338
GsaI	CCCAGC	1 cut(s)	179
GsuI	CTGGAG	2 cut(s)	457, 863
HaeII	RGCGCY	4 cut(s)	151, 338, 1076, 1331
HaeIII	GGCC	7 cut(s)	326, 412, 544, 851, 1151, 1179, 1445
HapII	CCGG	9 cut(s)	54, 96, 416, 541, 620, 754, 1166, 1450, 1518
HgaI	GACGC	4 cut(s)	1060, 1096, 1158, 1250
HhaI	GCGC	9 cut(s)	150, 337, 947, 949, 1004, 1056, 1075, 1330, 1339
Hin1I	GRCGYC	2 cut(s)	1169, 1242
Hin1II	CATG	2 cut(s)	430, 1237
Hin6I	GCGC	9 cut(s)	148, 335, 945, 947, 1002, 1054, 1073, 1328, 1337
HinP1I	GCGC	9 cut(s)	148, 335, 945, 947, 1002, 1054, 1073, 1328, 1337
HincII	GTYRAC	2 cut(s)	460, 1305
HindII	GTYRAC	2 cut(s)	460, 1305
HpaII	CCGG	9 cut(s)	54, 96, 416, 541, 620, 754, 1166, 1450, 1518
HphI	GGTGA	3 cut(s)	841, 871, 1474
Hpy166II	GTNNAC	4 cut(s)	252, 460, 832, 1305
Hpy8I	GTNNAC	4 cut(s)	252, 460, 832, 1305
Hpy99I	CGWCG	6 cut(s)	125, 484, 550, 565, 773, 1244
HpyAV	CCTTC	9 cut(s)	46, 151, 316, 340, 541, 841, 901, 1378, 1435
HpyCH4III	ACNGT	4 cut(s)	226, 802, 873, 1319
HpyCH4IV	ACGT	1 cut(s)	1583
HpyCH4V	TGCA	8 cut(s)	430, 747, 805, 1021, 1138, 1200, 1215, 1564
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 177, 332, 388, 944, 1279, 1334, 1336, 1379
HpyF3I	CTNAG	7 cut(s)	392, 656, 701, 731, 1158, 1274, 1340
HpySE526I	ACGT	1 cut(s)	1583
Hsp92I	GRCGYC	2 cut(s)	1169, 1242
Hsp92II	CATG	2 cut(s)	430, 1237
HspAI	GCGC	9 cut(s)	148, 335, 945, 947, 1002, 1054, 1073, 1328, 1337
KflI	GGGWCCC	1 cut(s)	204
Kpn2I	TCCGGA	1 cut(s)	1517
KpnI	GGTACC	1 cut(s)	1546
Kzo9I	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
LguI	GCTCTTC	2 cut(s)	956, 1409
Lsp1109I	GCAGC	6 cut(s)	307, 375, 437, 744, 817, 1199
LweI	GCATC	3 cut(s)	614, 1008, 1260
MaeI	CTAG	1 cut(s)	1205
MaeII	ACGT	1 cut(s)	1583
MaeIII	GTNAC	2 cut(s)	551, 1343
MalI	GATC	6 cut(s)	32, 775, 916, 989, 1409, 1533
MbiI	CCGCTC	4 cut(s)	45, 382, 1048, 1419
MboI	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
MfeI	CAATTG	1 cut(s)	641
MflI	RGATCY	2 cut(s)	30, 914
MhlI	GDGCHC	3 cut(s)	81, 936, 999
MluCI	AATT	8 cut(s)	49, 235, 366, 607, 641, 672, 693, 1489
MluI	ACGCGT	1 cut(s)	1023
MmeI	TCCRAC	7 cut(s)	135, 184, 462, 751, 945, 1485, 1559
MroI	TCCGGA	1 cut(s)	1517
MseI	TTAA	3 cut(s)	104, 606, 1119
MspA1I	CMGCKG	4 cut(s)	584, 941, 1015, 1175
MspI	CCGG	9 cut(s)	54, 96, 416, 541, 620, 754, 1166, 1450, 1518
MspR9I	CCNGG	7 cut(s)	97, 363, 541, 621, 754, 1166, 1524
MunI	CAATTG	1 cut(s)	641
MvaI	CCWGG	2 cut(s)	363, 1524
MwoI	GCNNNNNNNGC	9 cut(s)	12, 177, 332, 388, 944, 1279, 1334, 1336, 1379
NciI	CCSGG	5 cut(s)	97, 541, 621, 754, 1166
NdeII	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
NlaIII	CATG	2 cut(s)	430, 1237
NlaIV	GGNNCC	6 cut(s)	100, 205, 206, 916, 1516, 1544
NmeAIII	GCCGAG	5 cut(s)	479, 485, 978, 1043, 1205
NmuCI	GTSAC	1 cut(s)	1343
NruI	TCGCGA	2 cut(s)	536, 790
NspI	RCATGY	1 cut(s)	430
PaeR7I	CTCGAG	1 cut(s)	317
PauI	GCGCGC	1 cut(s)	945
PciSI	GCTCTTC	2 cut(s)	956, 1409
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 438
PfeI	GAWTC	6 cut(s)	64, 229, 305, 879, 1192, 1295
Pfl23II	CGTACG	1 cut(s)	328
PflFI	GACNNNGTC	1 cut(s)	116
Ple19I	CGATCG	1 cut(s)	990
PpuMI	RGGWCCY	3 cut(s)	99, 204, 1227
Psp124BI	GAGCTC	1 cut(s)	81
Psp5II	RGGWCCY	3 cut(s)	99, 204, 1227
Psp6I	CCWGG	2 cut(s)	361, 1522
PspFI	CCCAGC	1 cut(s)	175
PspGI	CCWGG	2 cut(s)	361, 1522
PspLI	CGTACG	1 cut(s)	328
PspN4I	GGNNCC	6 cut(s)	100, 205, 206, 916, 1516, 1544
PspPI	GGNCC	5 cut(s)	99, 204, 1177, 1227, 1520
PspPPI	RGGWCCY	3 cut(s)	99, 204, 1227
PsuI	RGATCY	2 cut(s)	30, 914
PsyI	GACNNNGTC	1 cut(s)	116
PteI	GCGCGC	1 cut(s)	945
PvuI	CGATCG	1 cut(s)	990
RruI	TCGCGA	2 cut(s)	536, 790
RsaI	GTAC	4 cut(s)	330, 425, 870, 1544
RsaNI	GTAC	4 cut(s)	329, 424, 869, 1543
SacI	GAGCTC	1 cut(s)	81
SalI	GTCGAC	2 cut(s)	458, 1303
SapI	GCTCTTC	2 cut(s)	956, 1409
SaqAI	TTAA	3 cut(s)	104, 606, 1119
Sau3AI	GATC	6 cut(s)	30, 773, 914, 987, 1407, 1531
Sau96I	GGNCC	5 cut(s)	99, 204, 1177, 1227, 1520
ScrFI	CCNGG	7 cut(s)	97, 363, 541, 621, 754, 1166, 1524
SduI	GDGCHC	3 cut(s)	81, 936, 999
SfaNI	GCATC	3 cut(s)	614, 1008, 1260
Sfr274I	CTCGAG	1 cut(s)	317
SinI	GGWCC	4 cut(s)	99, 204, 1227, 1520
SlaI	CTCGAG	1 cut(s)	317
SmlI	CTYRAG	1 cut(s)	317
SmoI	CTYRAG	1 cut(s)	317
Sse9I	AATT	8 cut(s)	49, 235, 366, 607, 641, 672, 693, 1489
SspMI	CTAG	1 cut(s)	1205
SstI	GAGCTC	1 cut(s)	81
StyD4I	CCNGG	7 cut(s)	95, 361, 539, 619, 752, 1164, 1522
StyI	CCWWGG	1 cut(s)	1152
TaaI	ACNGT	4 cut(s)	226, 802, 873, 1319
TaiI	ACGT	1 cut(s)	1586
TaqI	TCGA	9 cut(s)	144, 195, 318, 459, 1239, 1304, 1352, 1410, 1530
TaqII	GACCGA	1 cut(s)	455
TasI	AATT	8 cut(s)	49, 235, 366, 607, 641, 672, 693, 1489
TauI	GCSGC	5 cut(s)	171, 415, 437, 941, 1328
TfiI	GAWTC	6 cut(s)	64, 229, 305, 879, 1192, 1295
Tru1I	TTAA	3 cut(s)	104, 606, 1119
Tru9I	TTAA	3 cut(s)	104, 606, 1119
TscAI	CASTG	2 cut(s)	498, 925
TseFI	GTSAC	1 cut(s)	1343
TseI	GCWGC	6 cut(s)	295, 388, 450, 757, 805, 1212
Tsp45I	GTSAC	1 cut(s)	1343
TspGWI	ACGGA	1 cut(s)	145
TspRI	CASTG	2 cut(s)	498, 925
Tth111I	GACNNNGTC	1 cut(s)	116
VpaK11BI	GGWCC	4 cut(s)	99, 204, 1227, 1520
XceI	RCATGY	1 cut(s)	430
XhoI	CTCGAG	1 cut(s)	317
XmiI	GTMKAC	3 cut(s)	251, 459, 1304
XspI	CTAG	1 cut(s)	1205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.