RchiOBHm_Chr7g0179681

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0015002
Physical Location & Seq
Reverse (-)
1895714 .. 1897623
1910 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16018

Sequence Viewer

Length: 1644 bp
ATGGGTGGTAATGGGAAGCACAGGTGGAAGATCTCCTTCTACCGCTCCACCTCCTCCGGAAAGCAGCCGCCCAAAGAGTTCCTCTGTCCTATTTCCGGGTCTTTAATGTCCGACCCGGTCATCGTCGCCTCCGGCCAGACATTCGAGCGCCGCTCCGTCCAAGTCTGCCGCGAATTCGGCTACGCGCCCGAGCTCCCCGACGGCACCCGGCCCGATTTCTCCAACTTAATCCCCAACATGGCAATCAAGACCACCATCCTCAATTGGTGCGACCAACACCACTCCGACCGCCCCCACCCGCCGGATTTGGCCTCCGTCGAGAAGAACGTCCGGGCCCTGATGGAGGACAGCAGGGTCGATCAGGGAATTAGGGTTTCCGAGAGGGAATTGCTTAAAGGCGTGGCGGAGCGGCCGCCGATTATGTTCTCACACGCCGCCACCGAGCTCGGCCGCGGCCGCGTCGACCATTTCTACTCCAGCTCGTCGGAAGAGTCCGTCGTCATCGCCTCCCCAAGTCCTTACACTCCTCTTCCCTTCGCGACTCGGCCGTCGTGTTACTCCTCCTCGCCTTCTTCCTCTGAAATTGTCGAACTCGAAACCCTAAATCCCAATTCCAATTCCAATTCCAATTCCGATTCGATTCATTTAAGTGCGGAGGAGGAAGAATTGATGACGAAGCTCAGTAGCTCCGTCATAGTCGAGCAAGAAGAGGCGGTGATTTCACTGAGGAAGCTGACCAGGACGAAAGAGGAGCTCAGGGTTTCGCTCTGCACGCCGCGGCTGCTCTCGGCCCTCCGATCTCTGATCGTCTCGCGCTACAGCACCGTCCAGGTCAACGCCGCCGCGTCGCTGGTCAACCTCTCGCTGGAGAAGCCGAACAAGGTGAAGATCGTGCGGTCGGGATTCGTCCCGCCGCTGGTCGACGTTTTGAAAAGCGGATCCGGCGAGTCGCAGGAGCACGCCGCCGGCGCGCTCTTCAGCCTAGCCTTGGAAGAAGACAACAAGATGGCGATCGGAGTCCTCGGCGCGTTGCCGCCGCTCATGCACTCGCTGGTAAGGTCGGAGAGTGAGCGCACGCGCCACGACTCGGCTCTGGCGCTCTACCACCTGACGCTGGTGGAGAGCAACCGCATCAAACTCGTGAAGCTGAACGCGGTGCCGACGCTTCTGGCGCTGTCGAAGGCGCCCAGGTCGGCGGGTCGGGTTTTGTTGATACTGTGCAACCTGGCGATCTGCGGCGAGGGGAGGTCGGCGATGCTGGACGCGAACGCGGTGGAGTGTTTGGTCGGGATGCTGAGGAGGAACGAGTTGGACTCGGAGTCGACGCGCGAGAACTGCGTGGCGGCGCTGTACGCGCTGAGCCACGGGTCGATGAGGTTTCGGGGGCTGGCGAGGGAGGCGAAGGCGGTGGAGGTGTTGAGTGAGGTGGAGAAGAGAGGGAGCGAGAGGGCGAGGGAGAAGGCCAAGAGGCTGTTGATGATCATGAGAGGCGGCGGCGGAGGAGGAGGAGGGAGGGCGGACGATGGTGAGCCGGATTGGGAGGGGGTTTTGGATTCGGGTACTGGAGTTGGGCTCGGCGCGGGAACCCGGTACCGAGTTGGGCCTGGTAGGAGCTTGCATGCTGCCAACTCAACTACCTTTTAG

Protein Analysis

547

Amino Acids

59.26

Weight (kDa)

8.03

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 24 - 94 1.9e-10 U-box domain
ARM_PUB PF25598 225 - 495 3.2e-07 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 249 - 474 2.6e-10 ARMC5
Arm PF00514 292 - 329 4.1e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015002)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G65200
fragaria_vesca FvH4_5g16420
malus_domestica MD06G1180900.v1.1 MD14G1186000.v1.1
prunus_persica Prupe.5G178900_v2.0.a1
pyrus_communis pycom06g16000 pycom14g15480
rosa_chinensis RchiOBHm_Chr7g0179681
rosa_laevigata RLG00000005331
rosa_multiflora Rmu_sc0005329.1_g000033
rosa_roxburghii Rroxscaffold_155G00443810 Rroxscaffold_3G00273550
rosa_rugosa Rorug06G0427300
rosa_samantha Rh7BG025900 Rh7DG027500
rosa_wichuraiana Rw7G002150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 353, 547
Acc65I GGTACC 1 cut(s) 1590
AccB1I GGYRCC 4 cut(s) 203, 1156, 1183, 1590
AccBSI CCGCTC 4 cut(s) 45, 153, 409, 1039
AccI GTMKAC 3 cut(s) 462, 921, 1322
AccIII TCCGGA 1 cut(s) 56
AclWI GGATC 2 cut(s) 933, 946
AcoI YGGCCR 5 cut(s) 133, 410, 448, 454, 545
AcsI RAATTY 1 cut(s) 173
AcuI CTGAAG 1 cut(s) 961
AcyI GRCGYC 1 cut(s) 1184
AfaI GTAC 3 cut(s) 1352, 1561, 1592
AfiI CCNNNNNNNGG 9 cut(s) 95, 238, 301, 343, 865, 916, 988, 1087, 1114
AgsI TTSAA 1 cut(s) 931
AhdI GACNNNNNGTC 1 cut(s) 1318
AjnI CCWGG 5 cut(s) 737, 828, 1187, 1224, 1603
AluBI AGCT 9 cut(s) 193, 445, 480, 679, 687, 733, 754, 1147, 1614
AluI AGCT 9 cut(s) 193, 445, 480, 679, 687, 733, 754, 1147, 1614
Alw21I GWGCWC 4 cut(s) 195, 447, 756, 960
Alw26I GTCTC 1 cut(s) 814
AlwI GGATC 2 cut(s) 933, 946
Ama87I CYCGRG 1 cut(s) 188
Aor13HI TCCGGA 1 cut(s) 56
ApaI GGGCCC 1 cut(s) 337
ApeKI GCWGC 3 cut(s) 64, 781, 1622
ApoI RAATTY 1 cut(s) 173
Asp718I GGTACC 1 cut(s) 1590
AspS9I GGNCC 5 cut(s) 210, 333, 334, 790, 1601
AsuC2I CCSGG 5 cut(s) 97, 116, 208, 332, 1588
AsuHPI GGTGA 3 cut(s) 727, 895, 1538
AvaI CYCGRG 1 cut(s) 188
BaeGI GKGCMC 1 cut(s) 337
BaeI ACNNNNGTAYC 2 cut(s) 1551, 1584
BamHI GGATCC 1 cut(s) 938
BanI GGYRCC 4 cut(s) 203, 1156, 1183, 1590
BanII GRGCYC 5 cut(s) 195, 337, 447, 756, 1575
BauI CACGAG 1 cut(s) 1139
BbsI GAAGAC 1 cut(s) 1002
Bbv12I GWGCWC 4 cut(s) 195, 447, 756, 960
BbvCI CCTCAGC 1 cut(s) 1295
BbvI GCAGC 3 cut(s) 76, 768, 1609
BccI CCATC 4 cut(s) 263, 334, 1000, 1517
BceAI ACGGC 2 cut(s) 217, 532
BcgI CGANNNNNNTGC 2 cut(s) 1120, 1154
BciT130I CCWGG 5 cut(s) 739, 830, 1189, 1226, 1605
BclI TGATCA 1 cut(s) 1479
BcnI CCSGG 5 cut(s) 97, 116, 208, 332, 1588
BcoDI GTCTC 1 cut(s) 814
BfaI CTAG 1 cut(s) 983
BfmI CTRYAG 1 cut(s) 817
BfoI RGCGCY 5 cut(s) 151, 1100, 1175, 1187, 1349
BglII AGATCT 1 cut(s) 30
BlpI GCTNAGC 1 cut(s) 1358
BmeRI GACNNNNNGTC 1 cut(s) 1318
BmeT110I CYCGRG 1 cut(s) 188
BmgT120I GGNCC 5 cut(s) 210, 333, 334, 790, 1601
BmiI GGNNCC 7 cut(s) 205, 335, 940, 1158, 1185, 1585, 1592
BmsI GCATC 3 cut(s) 1140, 1245, 1281
BpiI GAAGAC 1 cut(s) 1002
BplI GAGNNNNNCTC 6 cut(s) 137, 169, 1298, 1330, 1557, 1589
BpmI CTGGAG 3 cut(s) 460, 887, 1584
Bpu10I CCTNAGC 2 cut(s) 755, 1295
Bpu1102I GCTNAGC 1 cut(s) 1358
BpuMI CCSGG 5 cut(s) 97, 116, 208, 332, 1588
BsaBI GATNNNNATC 1 cut(s) 1010
BsaHI GRCGYC 1 cut(s) 1184
BsaJI CCNNGG 6 cut(s) 451, 776, 987, 1021, 1187, 1363
BsaWI WCCGGW 1 cut(s) 56
Bsc4I CCNNNNNNNGG 9 cut(s) 95, 238, 301, 343, 865, 916, 988, 1087, 1114
Bse118I RCCGGY 1 cut(s) 965
Bse1I ACTGG 1 cut(s) 1567
Bse8I GATNNNNATC 1 cut(s) 1010
BseAI TCCGGA 1 cut(s) 56
BseBI CCWGG 5 cut(s) 739, 830, 1189, 1226, 1605
BseDI CCNNGG 6 cut(s) 451, 776, 987, 1021, 1187, 1363
BseGI GGATG 2 cut(s) 255, 1296
BseJI GATNNNNATC 1 cut(s) 1010
BseLI CCNNNNNNNGG 9 cut(s) 95, 238, 301, 343, 865, 916, 988, 1087, 1114
BseMII CTCAG 5 cut(s) 694, 716, 769, 1286, 1349
BseNI ACTGG 1 cut(s) 1567
BsePI GCGCGC 1 cut(s) 969
BseSI GKGCMC 1 cut(s) 337
BseX3I CGGCCG 4 cut(s) 410, 448, 454, 545
BseXI GCAGC 3 cut(s) 76, 768, 1609
BsgI GTGCAG 1 cut(s) 754
Bsh1285I CGRYCG 7 cut(s) 289, 413, 451, 457, 548, 899, 1014
BshNI GGYRCC 4 cut(s) 203, 1156, 1183, 1590
BsiEI CGRYCG 7 cut(s) 289, 413, 451, 457, 548, 899, 1014
BsiHKAI GWGCWC 4 cut(s) 195, 447, 756, 960
BsiHKCI CYCGRG 1 cut(s) 188
BslFI GGGAC 1 cut(s) 893
BslI CCNNNNNNNGG 9 cut(s) 95, 238, 301, 343, 865, 916, 988, 1087, 1114
BsmAI GTCTC 1 cut(s) 814
BsmBI CGTCTC 1 cut(s) 814
BsmFI GGGAC 1 cut(s) 893
BsoBI CYCGRG 1 cut(s) 188
Bsp120I GGGCCC 1 cut(s) 333
Bsp1286I GDGCHC 6 cut(s) 195, 337, 447, 756, 960, 1575
Bsp13I TCCGGA 1 cut(s) 56
Bsp143I GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
Bsp1720I GCTNAGC 1 cut(s) 1358
Bsp68I TCGCGA 1 cut(s) 539
BspCNI CTCAG 5 cut(s) 693, 717, 768, 1287, 1350
BspEI TCCGGA 1 cut(s) 56
BspHI TCATGA 1 cut(s) 1482
BspLI GGNNCC 7 cut(s) 205, 335, 940, 1158, 1185, 1585, 1592
BspPI GGATC 2 cut(s) 933, 946
BspQI GCTCTTC 1 cut(s) 980
BspT107I GGYRCC 4 cut(s) 203, 1156, 1183, 1590
BsrBI CCGCTC 4 cut(s) 45, 153, 409, 1039
BsrFI RCCGGY 1 cut(s) 965
BsrI ACTGG 1 cut(s) 1567
BssAI RCCGGY 1 cut(s) 965
BssECI CCNNGG 6 cut(s) 451, 776, 987, 1021, 1187, 1363
BssHII GCGCGC 1 cut(s) 969
BssMI GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
BssNI GRCGYC 1 cut(s) 1184
BssSI CACGAG 1 cut(s) 1139
BssT1I CCWWGG 1 cut(s) 987
Bst2BI CACGAG 1 cut(s) 1139
Bst2UI CCWGG 5 cut(s) 739, 830, 1189, 1226, 1605
Bst4CI ACNGT 2 cut(s) 826, 1218
Bst6I CTCTTC 5 cut(s) 483, 534, 702, 980, 1427
BstACI GRCGYC 1 cut(s) 1184
BstC8I GCNNGC 8 cut(s) 773, 960, 967, 971, 1076, 1389, 1616, 1620
BstDEI CTNAG 5 cut(s) 680, 725, 755, 1295, 1358
BstDSI CCRYGG 3 cut(s) 451, 776, 1363
BstENI CCTNNNNNAGG 1 cut(s) 341
BstF5I GGATG 2 cut(s) 255, 1296
BstH2I RGCGCY 5 cut(s) 151, 1100, 1175, 1187, 1349
BstKTI GATC 9 cut(s) 33, 361, 800, 807, 891, 941, 1014, 1233, 1482
BstMAI GTCTC 1 cut(s) 814
BstMBI GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
BstMCI CGRYCG 7 cut(s) 289, 413, 451, 457, 548, 899, 1014
BstNI CCWGG 5 cut(s) 739, 830, 1189, 1226, 1605
BstNSI RCATGY 1 cut(s) 1622
BstSFI CTRYAG 1 cut(s) 817
BstSLI GKGCMC 1 cut(s) 337
BstV1I GCAGC 3 cut(s) 76, 768, 1609
BstV2I GAAGAC 1 cut(s) 1002
BstX2I RGATCY 2 cut(s) 30, 938
BstYI RGATCY 2 cut(s) 30, 938
BstZI CGGCCG 4 cut(s) 410, 448, 454, 545
BtgI CCRYGG 3 cut(s) 451, 776, 1363
BtgZI GCGATG 2 cut(s) 487, 1268
BtsCI GGATG 2 cut(s) 255, 1296
BtsIMutI CAGTG 1 cut(s) 722
BtuMI TCGCGA 1 cut(s) 539
Cac8I GCNNGC 8 cut(s) 773, 960, 967, 971, 1076, 1389, 1616, 1620
CciI TCATGA 1 cut(s) 1482
CciNI GCGGCCGC 2 cut(s) 410, 454
Cfr10I RCCGGY 1 cut(s) 965
Cfr13I GGNCC 5 cut(s) 210, 333, 334, 790, 1601
Cfr42I CCGCGG 2 cut(s) 454, 779
CseI GACGC 6 cut(s) 448, 834, 1120, 1171, 1271, 1333
Csp6I GTAC 3 cut(s) 1351, 1560, 1591
CviAII CATG 4 cut(s) 238, 1042, 1483, 1619
CviQI GTAC 3 cut(s) 1351, 1560, 1591
DdeI CTNAG 5 cut(s) 680, 725, 755, 1295, 1358
DinI GGCGCC 1 cut(s) 1185
DpnI GATC 9 cut(s) 32, 360, 799, 806, 890, 940, 1013, 1232, 1481
DpnII GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
DrdI GACNNNNNNGTC 2 cut(s) 353, 547
DriI GACNNNNNGTC 1 cut(s) 1318
DseDI GACNNNNNNGTC 2 cut(s) 353, 547
EaeI YGGCCR 5 cut(s) 133, 410, 448, 454, 545
EagI CGGCCG 4 cut(s) 410, 448, 454, 545
Eam1104I CTCTTC 5 cut(s) 483, 534, 702, 980, 1427
Eam1105I GACNNNNNGTC 1 cut(s) 1318
EarI CTCTTC 5 cut(s) 483, 534, 702, 980, 1427
EciI GGCGGA 3 cut(s) 419, 1512, 1532
Ecl136II GAGCTC 3 cut(s) 193, 445, 754
EclXI CGGCCG 4 cut(s) 410, 448, 454, 545
Eco130I CCWWGG 1 cut(s) 987
Eco24I GRGCYC 5 cut(s) 195, 337, 447, 756, 1575
Eco52I CGGCCG 4 cut(s) 410, 448, 454, 545
Eco53kI GAGCTC 3 cut(s) 193, 445, 754
Eco57I CTGAAG 1 cut(s) 961
Eco88I CYCGRG 1 cut(s) 188
EcoICRI GAGCTC 3 cut(s) 193, 445, 754
EcoNI CCTNNNNNAGG 1 cut(s) 341
EcoO109I RGGNCCY 1 cut(s) 334
EcoRI GAATTC 1 cut(s) 173
EcoRII CCWGG 5 cut(s) 737, 828, 1187, 1224, 1603
EcoT14I CCWWGG 1 cut(s) 987
EcoT38I GRGCYC 5 cut(s) 195, 337, 447, 756, 1575
EgeI GGCGCC 1 cut(s) 1185
EheI GGCGCC 1 cut(s) 1185
ErhI CCWWGG 1 cut(s) 987
Esp3I CGTCTC 1 cut(s) 814
FaeI CATG 4 cut(s) 241, 1045, 1486, 1622
FaiI YATR 6 cut(s) 239, 422, 695, 1043, 1484, 1620
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FaqI GGGAC 1 cut(s) 893
FatI CATG 4 cut(s) 237, 1041, 1482, 1618
FauI CCCGC 4 cut(s) 306, 918, 1189, 1573
FbaI TGATCA 1 cut(s) 1479
FblI GTMKAC 3 cut(s) 462, 921, 1322
FokI GGATG 2 cut(s) 242, 1303
FriOI GRGCYC 5 cut(s) 195, 337, 447, 756, 1575
FspBI CTAG 1 cut(s) 983
GsuI CTGGAG 3 cut(s) 460, 887, 1584
HaeII RGCGCY 5 cut(s) 151, 1100, 1175, 1187, 1349
HgaI GACGC 6 cut(s) 448, 834, 1120, 1171, 1271, 1333
Hin1I GRCGYC 1 cut(s) 1184
Hin1II CATG 4 cut(s) 241, 1045, 1486, 1622
HincII GTYRAC 5 cut(s) 463, 835, 856, 922, 1323
HindII GTYRAC 5 cut(s) 463, 835, 856, 922, 1323
HphI GGTGA 3 cut(s) 727, 895, 1538
Hpy166II GTNNAC 5 cut(s) 463, 835, 856, 922, 1323
Hpy188III TCNNGA 8 cut(s) 57, 247, 319, 538, 900, 1141, 1288, 1483
Hpy8I GTNNAC 5 cut(s) 463, 835, 856, 922, 1323
HpyAV CCTTC 6 cut(s) 46, 544, 579, 1174, 1396, 1453
HpyCH4III ACNGT 2 cut(s) 826, 1218
HpyCH4IV ACGT 2 cut(s) 327, 924
HpyCH4V TGCA 4 cut(s) 771, 1045, 1221, 1618
HpyF3I CTNAG 5 cut(s) 680, 725, 755, 1295, 1358
HpySE526I ACGT 2 cut(s) 327, 924
Hsp92I GRCGYC 1 cut(s) 1184
Hsp92II CATG 4 cut(s) 241, 1045, 1486, 1622
KasI GGCGCC 1 cut(s) 1183
Kpn2I TCCGGA 1 cut(s) 56
KpnI GGTACC 1 cut(s) 1594
KroI GCCGGC 1 cut(s) 965
KroNI GCCGGC 1 cut(s) 967
Ksp22I TGATCA 1 cut(s) 1479
KspI CCGCGG 2 cut(s) 454, 779
Kzo9I GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
LguI GCTCTTC 1 cut(s) 980
LmnI GCTCC 9 cut(s) 50, 158, 198, 406, 692, 751, 955, 1440, 1611
Lsp1109I GCAGC 3 cut(s) 76, 768, 1609
LweI GCATC 3 cut(s) 1140, 1245, 1281
MaeI CTAG 1 cut(s) 983
MaeII ACGT 2 cut(s) 327, 924
MaeIII GTNAC 1 cut(s) 554
MalI GATC 9 cut(s) 32, 360, 799, 806, 890, 940, 1013, 1232, 1481
MbiI CCGCTC 4 cut(s) 45, 153, 409, 1039
MboI GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
MfeI CAATTG 1 cut(s) 262
MflI RGATCY 2 cut(s) 30, 938
MhlI GDGCHC 6 cut(s) 195, 337, 447, 756, 960, 1575
Mly113I GGCGCC 1 cut(s) 1184
MlyI GAGTC 7 cut(s) 500, 535, 956, 1026, 1079, 1307, 1328
MmeI TCCRAC 6 cut(s) 135, 246, 309, 465, 1041, 1290
MreI CGCCGGCG 1 cut(s) 965
MroI TCCGGA 1 cut(s) 56
MroNI GCCGGC 1 cut(s) 965
MseI TTAA 4 cut(s) 104, 227, 393, 647
MslI CAYNNNNRTG 1 cut(s) 648
MspA1I CMGCKG 3 cut(s) 453, 778, 916
MunI CAATTG 1 cut(s) 262
MvaI CCWGG 5 cut(s) 739, 830, 1189, 1226, 1605
NaeI GCCGGC 1 cut(s) 967
NarI GGCGCC 1 cut(s) 1184
NciI CCSGG 5 cut(s) 97, 116, 208, 332, 1588
NdeII GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
NgoMIV GCCGGC 1 cut(s) 965
NlaIII CATG 4 cut(s) 241, 1045, 1486, 1622
NlaIV GGNNCC 7 cut(s) 205, 335, 940, 1158, 1185, 1585, 1592
NmeAIII GCCGAG 6 cut(s) 426, 523, 767, 1002, 1067, 1554
NotI GCGGCCGC 2 cut(s) 410, 454
NruI TCGCGA 1 cut(s) 539
NspI RCATGY 1 cut(s) 1622
PaeI GCATGC 1 cut(s) 1622
PagI TCATGA 1 cut(s) 1482
PauI GCGCGC 1 cut(s) 969
PciSI GCTCTTC 1 cut(s) 980
PcsI WCGNNNNNNNCGW 2 cut(s) 324, 438
PdiI GCCGGC 1 cut(s) 967
PfeI GAWTC 4 cut(s) 635, 640, 903, 1553
PflFI GACNNNGTC 1 cut(s) 116
Ple19I CGATCG 1 cut(s) 1014
PleI GAGTC 7 cut(s) 499, 535, 955, 1025, 1079, 1307, 1327
PluTI GGCGCC 1 cut(s) 1187
PpsI GAGTC 7 cut(s) 499, 535, 955, 1025, 1079, 1307, 1327
Psp124BI GAGCTC 3 cut(s) 195, 447, 756
Psp6I CCWGG 5 cut(s) 737, 828, 1187, 1224, 1603
PspGI CCWGG 5 cut(s) 737, 828, 1187, 1224, 1603
PspN4I GGNNCC 7 cut(s) 205, 335, 940, 1158, 1185, 1585, 1592
PspOMI GGGCCC 1 cut(s) 333
PspPI GGNCC 5 cut(s) 210, 333, 334, 790, 1601
PsuI RGATCY 2 cut(s) 30, 938
PsyI GACNNNGTC 1 cut(s) 116
PteI GCGCGC 1 cut(s) 969
PvuI CGATCG 1 cut(s) 1014
RruI TCGCGA 1 cut(s) 539
RsaI GTAC 3 cut(s) 1352, 1561, 1592
RsaNI GTAC 3 cut(s) 1351, 1560, 1591
RseI CAYNNNNRTG 1 cut(s) 648
SacI GAGCTC 3 cut(s) 195, 447, 756
SacII CCGCGG 2 cut(s) 454, 779
SalI GTCGAC 3 cut(s) 461, 920, 1321
SapI GCTCTTC 1 cut(s) 980
SaqAI TTAA 4 cut(s) 104, 227, 393, 647
Sau3AI GATC 9 cut(s) 30, 358, 797, 804, 888, 938, 1011, 1230, 1479
Sau96I GGNCC 5 cut(s) 210, 333, 334, 790, 1601
SchI GAGTC 7 cut(s) 500, 535, 956, 1026, 1079, 1307, 1328
SduI GDGCHC 6 cut(s) 195, 337, 447, 756, 960, 1575
SfaNI GCATC 3 cut(s) 1140, 1245, 1281
SfcI CTRYAG 1 cut(s) 817
SfoI GGCGCC 1 cut(s) 1185
Sfr303I CCGCGG 2 cut(s) 454, 779
SgrAI CRCCGGYG 1 cut(s) 965
SgrBI CCGCGG 2 cut(s) 454, 779
SmiMI CAYNNNNRTG 1 cut(s) 648
SphI GCATGC 1 cut(s) 1622
SspDI GGCGCC 1 cut(s) 1183
SspMI CTAG 1 cut(s) 983
SstI GAGCTC 3 cut(s) 195, 447, 756
StyI CCWWGG 1 cut(s) 987
TaaI ACNGT 2 cut(s) 826, 1218
TaiI ACGT 2 cut(s) 330, 927
TfiI GAWTC 4 cut(s) 635, 640, 903, 1553
Tru1I TTAA 4 cut(s) 104, 227, 393, 647
Tru9I TTAA 4 cut(s) 104, 227, 393, 647
TscAI CASTG 1 cut(s) 729
TseI GCWGC 3 cut(s) 64, 781, 1622
TspDTI ATGAA 1 cut(s) 632
TspGWI ACGGA 4 cut(s) 145, 304, 484, 679
TspRI CASTG 1 cut(s) 729
Tth111I GACNNNGTC 1 cut(s) 116
XagI CCTNNNNNAGG 1 cut(s) 341
XapI RAATTY 1 cut(s) 173
XceI RCATGY 1 cut(s) 1622
XmiI GTMKAC 3 cut(s) 462, 921, 1322
XspI CTAG 1 cut(s) 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.