Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0015002

Physical Location & Seq

Genomic Coordinates Forward (+)

66842193 .. 66843833

Gene Structure 1641 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005331

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGGTGGTAATGGAAAGCACAGGTGGAAGATCTCCTTCTACCGCTCCACCTCCTCCGCAAAGCAGCCGCCCAAAGAGTTCCTGTGTCCTATTTCCGGGTCTTTAATGTCCGACCCGGTCATCGTCGCCTCCGGCCAGACATTCGAGCGCCGCTCCGTACAAGTCTGCCGCGAATTCGGCTACGCCCCCGAGCTCCCCGACGGGACCCGGCCCGATTTCTCCAACTTAATCCCTAACATGGCAATCAAGACCACCATCGTCAACTGGTGCGACCAGCACCACTCCGACCGCCCCCAGCCGCCGGATTTGGCCTCAGTCGAGAAGAACGTCCGGGCCCTGATGGAGGAGAGCAGGGTCGATCAGGGAATTAGGGTTTCCGAGAGGGAATTGCTTAAAGGCGTGGCGGAGCGGCCGCCGATTATGTTCTCTCACGCCGCCACCGAGCTCGGCCGCGGCCGCGTCGACCATTTCTACTCCAGCTCGTCGGAAGAGTCCGTCGTCATCGCCTCCCCAAGTCCTTACACTCCTCTTCCCTTCGCGACTCGGCCGTCGTGTTACTCCTCCTCGCCTTCTTCGTCTGAAATTGTCGAACTCGAAGCCCTAAATCCCAATTCGAATTCCAGTTCGATTAATTTAAGTGCGGAGGAGGAAGAATTGATGACGAAGCTCAGTAGCTCCGTCATAGTCGAGCAAGAAGAGGCGGTGATTTCACTGAGGAAGCTGACCAGGACGAAAGAGGAGCTCAGGGTTTCGCTCTGCACGCCGCGGCTGCTCTCGGCCCTCCGATCTCTGATCGTCTCGCGCTACAGCACCGTCCAAGTCAACGCCGCCGCGTCGCTGGTCAACCTCTCGCTGGAGAAGCCGAACAAGGTGAAGATCGTGCGGTCGGGATTCGTCCCGCCGCTGGTTGACGTTTTGAAAGCCGGATCCGGCGAGTCCCAGGAGCACGCCGCCGGCGCGCTCTTCAGCCTAGCCTTGGAAGAAGACAACAAGATGGCGATCGGAGTCCTCGGCGCGTTGCCGCCGCTCATGCACGCGCTGGTAAGGTCGGAGAGTGAGCGCACGCGCCACGACTCGGCTCTGGCGCTCTACCACCTGACGCTGGTGGAGAGCAACCGAATCAAACTCGTGAAGCTGAACGCGGTGCCGACGCTTCTGGCGCTGTCGAAGGCGCCCGGGTCGGCGGGTCGGGTTTTGTTGATACTGTGCAACCTGGCGATCTGCGGCGAGGGAAGGTCGGCGATGCTGGACGCGAACGCGGTGGAGTGCTTGGTGGGGATGCTGAGGAGGAACGAGCTGGACTCGGAGTCGACGCGCGAGAACTGCGTGGCGGCGCTGTACGCGCTGAGCCACGGGTCGATGAGGTTCCGGGGGCTGGCGAGGGAGGCGAAGGCGGTGGAGGTGTTGAGTGAGGTGGAGAAGAGAGGGAGCGAGAGGGCGAGGGAGAAGGCCAAGAGGCTGTTGATGATCATGAGAGGCGGCGGGGGAGGAGGAGGAGGAGGAGGAGGGAGGGCGGAGGATGGTGAGCCTGATTGGGAGGGGGTTTTGGATTCGGGTACCGGAGTTGGGCTCGGCGCGGGAACCCGGTATCGAGTTGGGCCGGGTAGGAGCTTGCATGCTGCCAACTCAACTACCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

547

Amino Acids

58.84

Weight (kDa)

8.03

Isoelectric Point (pI)

53.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	24 - 94	2.4e-10	U-box domain
ARM_PUB	PF25598	221 - 491	2.3e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	245 - 470	1.6e-10	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65200
fragaria_vesca	FvH4_5g16420
malus_domestica	MD06G1180900.v1.1 MD14G1186000.v1.1
prunus_persica	Prupe.5G178900_v2.0.a1
pyrus_communis	pycom06g16000 pycom14g15480
rosa_chinensis	RchiOBHm_Chr7g0179681
rosa_laevigata	RLG00000005331
rosa_multiflora	Rmu_sc0005329.1_g000033
rosa_roxburghii	Rroxscaffold_155G00443810 Rroxscaffold_3G00273550
rosa_rugosa	Rorug06G0427300
rosa_samantha	Rh7BG025900 Rh7DG027500
rosa_wichuraiana	Rw7G002150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	547
Acc65I	GGTACC	1 cut(s)	1556
AccB1I	GGYRCC	3 cut(s)	1144, 1171, 1556
AccBSI	CCGCTC	4 cut(s)	45, 153, 409, 1027
AccI	GTMKAC	2 cut(s)	462, 1310
AclWI	GGATC	2 cut(s)	921, 934
AcoI	YGGCCR	5 cut(s)	133, 410, 448, 454, 545
AcsI	RAATTY	2 cut(s)	173, 616
AcuI	CTGAAG	1 cut(s)	949
AcyI	GRCGYC	1 cut(s)	1172
AfaI	GTAC	3 cut(s)	159, 1340, 1558
AgsI	TTSAA	1 cut(s)	919
AhdI	GACNNNNNGTC	1 cut(s)	1306
AjnI	CCWGG	3 cut(s)	725, 939, 1212
Alw21I	GWGCWC	4 cut(s)	195, 447, 744, 948
Alw26I	GTCTC	1 cut(s)	802
AlwI	GGATC	2 cut(s)	921, 934
Ama87I	CYCGRG	2 cut(s)	188, 1175
ApaI	GGGCCC	1 cut(s)	337
ApeKI	GCWGC	3 cut(s)	64, 769, 1619
ApoI	RAATTY	2 cut(s)	173, 616
AseI	ATTAAT	1 cut(s)	630
Asp718I	GGTACC	1 cut(s)	1556
AspS9I	GGNCC	6 cut(s)	204, 210, 333, 334, 778, 1598
AsuC2I	CCSGG	9 cut(s)	97, 116, 208, 332, 1176, 1177, 1370, 1585, 1602
AsuHPI	GGTGA	3 cut(s)	715, 883, 1535
AsuII	TTCGAA	1 cut(s)	614
AvaI	CYCGRG	2 cut(s)	188, 1175
AvaII	GGWCC	1 cut(s)	204
BaeGI	GKGCMC	1 cut(s)	337
BaeI	ACNNNNGTAYC	2 cut(s)	1548, 1581
BamHI	GGATCC	1 cut(s)	926
BanI	GGYRCC	3 cut(s)	1144, 1171, 1556
BanII	GRGCYC	5 cut(s)	195, 337, 447, 744, 1572
BauI	CACGAG	1 cut(s)	1127
BbsI	GAAGAC	1 cut(s)	990
Bbv12I	GWGCWC	4 cut(s)	195, 447, 744, 948
BbvCI	CCTCAGC	1 cut(s)	1283
BbvI	GCAGC	3 cut(s)	76, 756, 1606
BccI	CCATC	4 cut(s)	263, 334, 988, 1514
BceAI	ACGGC	1 cut(s)	532
BciT130I	CCWGG	3 cut(s)	727, 941, 1214
BclI	TGATCA	1 cut(s)	1467
BcnI	CCSGG	9 cut(s)	97, 116, 208, 332, 1176, 1177, 1370, 1585, 1602
BcoDI	GTCTC	1 cut(s)	802
BfaI	CTAG	1 cut(s)	971
BfmI	CTRYAG	1 cut(s)	805
BfoI	RGCGCY	5 cut(s)	151, 1088, 1163, 1175, 1337
BglII	AGATCT	1 cut(s)	30
BlpI	GCTNAGC	1 cut(s)	1346
Bme18I	GGWCC	1 cut(s)	204
BmeRI	GACNNNNNGTC	1 cut(s)	1306
BmeT110I	CYCGRG	2 cut(s)	188, 1175
BmgT120I	GGNCC	6 cut(s)	204, 210, 333, 334, 778, 1598
BmiI	GGNNCC	9 cut(s)	205, 206, 335, 928, 1146, 1173, 1367, 1558, 1582
BmsI	GCATC	2 cut(s)	1233, 1269
BpiI	GAAGAC	1 cut(s)	990
BplI	GAGNNNNNCTC	6 cut(s)	137, 169, 1286, 1318, 1554, 1586
BpmI	CTGGAG	2 cut(s)	460, 875
Bpu10I	CCTNAGC	2 cut(s)	743, 1283
Bpu1102I	GCTNAGC	1 cut(s)	1346
Bpu14I	TTCGAA	1 cut(s)	614
BpuMI	CCSGG	9 cut(s)	97, 116, 208, 332, 1176, 1177, 1370, 1585, 1602
BsaBI	GATNNNNATC	1 cut(s)	998
BsaHI	GRCGYC	1 cut(s)	1172
BsaJI	CCNNGG	8 cut(s)	451, 764, 939, 975, 1009, 1175, 1351, 1369
BsaWI	WCCGGW	1 cut(s)	1559
Bse118I	RCCGGY	1 cut(s)	953
Bse1I	ACTGG	2 cut(s)	269, 621
Bse8I	GATNNNNATC	1 cut(s)	998
BseBI	CCWGG	3 cut(s)	727, 941, 1214
BseDI	CCNNGG	8 cut(s)	451, 764, 939, 975, 1009, 1175, 1351, 1369
BseGI	GGATG	2 cut(s)	1284, 1525
BseJI	GATNNNNATC	1 cut(s)	998
BseMII	CTCAG	6 cut(s)	327, 682, 704, 757, 1274, 1337
BseNI	ACTGG	2 cut(s)	269, 621
BsePI	GCGCGC	1 cut(s)	957
BseSI	GKGCMC	1 cut(s)	337
BseX3I	CGGCCG	4 cut(s)	410, 448, 454, 545
BseXI	GCAGC	3 cut(s)	76, 756, 1606
BseYI	CCCAGC	1 cut(s)	294
BsgI	GTGCAG	1 cut(s)	742
Bsh1285I	CGRYCG	7 cut(s)	289, 413, 451, 457, 548, 887, 1002
BshNI	GGYRCC	3 cut(s)	1144, 1171, 1556
BsiEI	CGRYCG	7 cut(s)	289, 413, 451, 457, 548, 887, 1002
BsiHKAI	GWGCWC	4 cut(s)	195, 447, 744, 948
BsiHKCI	CYCGRG	2 cut(s)	188, 1175
BslFI	GGGAC	3 cut(s)	217, 881, 922
BsmAI	GTCTC	1 cut(s)	802
BsmBI	CGTCTC	1 cut(s)	802
BsmFI	GGGAC	3 cut(s)	217, 881, 922
BsoBI	CYCGRG	2 cut(s)	188, 1175
Bsp119I	TTCGAA	1 cut(s)	614
Bsp120I	GGGCCC	1 cut(s)	333
Bsp1286I	GDGCHC	6 cut(s)	195, 337, 447, 744, 948, 1572
Bsp143I	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
Bsp1720I	GCTNAGC	1 cut(s)	1346
Bsp68I	TCGCGA	1 cut(s)	539
BspCNI	CTCAG	6 cut(s)	326, 681, 705, 756, 1275, 1338
BspHI	TCATGA	1 cut(s)	1470
BspLI	GGNNCC	9 cut(s)	205, 206, 335, 928, 1146, 1173, 1367, 1558, 1582
BspPI	GGATC	2 cut(s)	921, 934
BspQI	GCTCTTC	1 cut(s)	968
BspT104I	TTCGAA	1 cut(s)	614
BspT107I	GGYRCC	3 cut(s)	1144, 1171, 1556
BsrBI	CCGCTC	4 cut(s)	45, 153, 409, 1027
BsrFI	RCCGGY	1 cut(s)	953
BsrI	ACTGG	2 cut(s)	269, 621
BssAI	RCCGGY	1 cut(s)	953
BssECI	CCNNGG	8 cut(s)	451, 764, 939, 975, 1009, 1175, 1351, 1369
BssHII	GCGCGC	1 cut(s)	957
BssMI	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
BssNI	GRCGYC	1 cut(s)	1172
BssSI	CACGAG	1 cut(s)	1127
BssT1I	CCWWGG	1 cut(s)	975
Bst2BI	CACGAG	1 cut(s)	1127
Bst2UI	CCWGG	3 cut(s)	727, 941, 1214
Bst4CI	ACNGT	2 cut(s)	814, 1206
Bst6I	CTCTTC	5 cut(s)	483, 534, 690, 968, 1415
BstACI	GRCGYC	1 cut(s)	1172
BstBI	TTCGAA	1 cut(s)	614
BstC8I	GCNNGC	9 cut(s)	761, 948, 955, 959, 1035, 1064, 1377, 1613, 1617
BstDEI	CTNAG	6 cut(s)	313, 668, 713, 743, 1283, 1346
BstDSI	CCRYGG	3 cut(s)	451, 764, 1351
BstENI	CCTNNNNNAGG	1 cut(s)	341
BstF5I	GGATG	2 cut(s)	1284, 1525
BstH2I	RGCGCY	5 cut(s)	151, 1088, 1163, 1175, 1337
BstKTI	GATC	9 cut(s)	33, 361, 788, 795, 879, 929, 1002, 1221, 1470
BstMAI	GTCTC	1 cut(s)	802
BstMBI	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
BstMCI	CGRYCG	7 cut(s)	289, 413, 451, 457, 548, 887, 1002
BstNI	CCWGG	3 cut(s)	727, 941, 1214
BstNSI	RCATGY	1 cut(s)	1619
BstSFI	CTRYAG	1 cut(s)	805
BstSLI	GKGCMC	1 cut(s)	337
BstV1I	GCAGC	3 cut(s)	76, 756, 1606
BstV2I	GAAGAC	1 cut(s)	990
BstX2I	RGATCY	2 cut(s)	30, 926
BstYI	RGATCY	2 cut(s)	30, 926
BstZI	CGGCCG	4 cut(s)	410, 448, 454, 545
BtgI	CCRYGG	3 cut(s)	451, 764, 1351
BtgZI	GCGATG	2 cut(s)	487, 1256
BtsCI	GGATG	2 cut(s)	1284, 1525
BtsIMutI	CAGTG	1 cut(s)	710
BtuMI	TCGCGA	1 cut(s)	539
Cac8I	GCNNGC	9 cut(s)	761, 948, 955, 959, 1035, 1064, 1377, 1613, 1617
CciI	TCATGA	1 cut(s)	1470
CciNI	GCGGCCGC	2 cut(s)	410, 454
Cfr10I	RCCGGY	1 cut(s)	953
Cfr13I	GGNCC	6 cut(s)	204, 210, 333, 334, 778, 1598
Cfr42I	CCGCGG	2 cut(s)	454, 767
Cfr9I	CCCGGG	1 cut(s)	1175
CseI	GACGC	6 cut(s)	448, 822, 1108, 1159, 1259, 1321
Csp6I	GTAC	3 cut(s)	158, 1339, 1557
CviAII	CATG	4 cut(s)	238, 1030, 1471, 1616
CviQI	GTAC	3 cut(s)	158, 1339, 1557
DdeI	CTNAG	6 cut(s)	313, 668, 713, 743, 1283, 1346
DinI	GGCGCC	1 cut(s)	1173
DpnI	GATC	9 cut(s)	32, 360, 787, 794, 878, 928, 1001, 1220, 1469
DpnII	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
DrdI	GACNNNNNNGTC	1 cut(s)	547
DriI	GACNNNNNGTC	1 cut(s)	1306
DseDI	GACNNNNNNGTC	1 cut(s)	547
EaeI	YGGCCR	5 cut(s)	133, 410, 448, 454, 545
EagI	CGGCCG	4 cut(s)	410, 448, 454, 545
Eam1104I	CTCTTC	5 cut(s)	483, 534, 690, 968, 1415
Eam1105I	GACNNNNNGTC	1 cut(s)	1306
EarI	CTCTTC	5 cut(s)	483, 534, 690, 968, 1415
EciI	GGCGGA	2 cut(s)	419, 1529
Ecl136II	GAGCTC	3 cut(s)	193, 445, 742
EclXI	CGGCCG	4 cut(s)	410, 448, 454, 545
Eco130I	CCWWGG	1 cut(s)	975
Eco24I	GRGCYC	5 cut(s)	195, 337, 447, 744, 1572
Eco47I	GGWCC	1 cut(s)	204
Eco52I	CGGCCG	4 cut(s)	410, 448, 454, 545
Eco53kI	GAGCTC	3 cut(s)	193, 445, 742
Eco57I	CTGAAG	1 cut(s)	949
Eco88I	CYCGRG	2 cut(s)	188, 1175
EcoICRI	GAGCTC	3 cut(s)	193, 445, 742
EcoNI	CCTNNNNNAGG	1 cut(s)	341
EcoO109I	RGGNCCY	2 cut(s)	204, 334
EcoRI	GAATTC	2 cut(s)	173, 616
EcoRII	CCWGG	3 cut(s)	725, 939, 1212
EcoT14I	CCWWGG	1 cut(s)	975
EcoT38I	GRGCYC	5 cut(s)	195, 337, 447, 744, 1572
EgeI	GGCGCC	1 cut(s)	1173
EheI	GGCGCC	1 cut(s)	1173
ErhI	CCWWGG	1 cut(s)	975
Esp3I	CGTCTC	1 cut(s)	802
FaeI	CATG	4 cut(s)	241, 1033, 1474, 1619
FaiI	YATR	6 cut(s)	239, 422, 683, 1031, 1472, 1617
FalI	AAGNNNNNCTT	2 cut(s)	20, 52
FaqI	GGGAC	3 cut(s)	217, 881, 922
FatI	CATG	4 cut(s)	237, 1029, 1470, 1615
FauI	CCCGC	4 cut(s)	906, 1177, 1475, 1570
FbaI	TGATCA	1 cut(s)	1467
FblI	GTMKAC	2 cut(s)	462, 1310
FokI	GGATG	2 cut(s)	1291, 1532
FriOI	GRGCYC	5 cut(s)	195, 337, 447, 744, 1572
FspBI	CTAG	1 cut(s)	971
GsaI	CCCAGC	1 cut(s)	298
GsuI	CTGGAG	2 cut(s)	460, 875
HaeII	RGCGCY	5 cut(s)	151, 1088, 1163, 1175, 1337
HgaI	GACGC	6 cut(s)	448, 822, 1108, 1159, 1259, 1321
Hin1I	GRCGYC	1 cut(s)	1172
Hin1II	CATG	4 cut(s)	241, 1033, 1474, 1619
HincII	GTYRAC	6 cut(s)	262, 463, 823, 844, 910, 1311
HindII	GTYRAC	6 cut(s)	262, 463, 823, 844, 910, 1311
HphI	GGTGA	3 cut(s)	715, 883, 1535
Hpy166II	GTNNAC	6 cut(s)	262, 463, 823, 844, 910, 1311
Hpy188III	TCNNGA	6 cut(s)	247, 319, 538, 888, 1129, 1471
Hpy8I	GTNNAC	6 cut(s)	262, 463, 823, 844, 910, 1311
Hpy99I	CGWCG	9 cut(s)	128, 203, 464, 487, 500, 553, 838, 1153, 1315
HpyAV	CCTTC	7 cut(s)	46, 544, 579, 1162, 1227, 1384, 1441
HpyCH4III	ACNGT	2 cut(s)	814, 1206
HpyCH4IV	ACGT	2 cut(s)	327, 912
HpyCH4V	TGCA	4 cut(s)	759, 1033, 1209, 1615
HpyF3I	CTNAG	6 cut(s)	313, 668, 713, 743, 1283, 1346
HpySE526I	ACGT	2 cut(s)	327, 912
Hsp92I	GRCGYC	1 cut(s)	1172
Hsp92II	CATG	4 cut(s)	241, 1033, 1474, 1619
KasI	GGCGCC	1 cut(s)	1171
KflI	GGGWCCC	1 cut(s)	204
KpnI	GGTACC	1 cut(s)	1560
KroI	GCCGGC	1 cut(s)	953
KroNI	GCCGGC	1 cut(s)	955
Ksp22I	TGATCA	1 cut(s)	1467
KspI	CCGCGG	2 cut(s)	454, 767
Kzo9I	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
LguI	GCTCTTC	1 cut(s)	968
LmnI	GCTCC	9 cut(s)	50, 158, 198, 406, 680, 739, 943, 1428, 1608
Lsp1109I	GCAGC	3 cut(s)	76, 756, 1606
LweI	GCATC	2 cut(s)	1233, 1269
MaeI	CTAG	1 cut(s)	971
MaeII	ACGT	2 cut(s)	327, 912
MaeIII	GTNAC	1 cut(s)	554
MalI	GATC	9 cut(s)	32, 360, 787, 794, 878, 928, 1001, 1220, 1469
MbiI	CCGCTC	4 cut(s)	45, 153, 409, 1027
MboI	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
MflI	RGATCY	2 cut(s)	30, 926
MhlI	GDGCHC	6 cut(s)	195, 337, 447, 744, 948, 1572
MluCI	AATT	8 cut(s)	173, 366, 386, 582, 610, 616, 631, 653
Mly113I	GGCGCC	1 cut(s)	1172
MlyI	GAGTC	7 cut(s)	500, 535, 944, 1014, 1067, 1295, 1316
MmeI	TCCRAC	5 cut(s)	135, 246, 309, 465, 1029
MreI	CGCCGGCG	1 cut(s)	953
MroNI	GCCGGC	1 cut(s)	953
MseI	TTAA	5 cut(s)	104, 227, 393, 630, 635
MspA1I	CMGCKG	3 cut(s)	453, 766, 904
MvaI	CCWGG	3 cut(s)	727, 941, 1214
NaeI	GCCGGC	1 cut(s)	955
NarI	GGCGCC	1 cut(s)	1172
NciI	CCSGG	9 cut(s)	97, 116, 208, 332, 1176, 1177, 1370, 1585, 1602
NdeII	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
NgoMIV	GCCGGC	1 cut(s)	953
NlaIII	CATG	4 cut(s)	241, 1033, 1474, 1619
NlaIV	GGNNCC	9 cut(s)	205, 206, 335, 928, 1146, 1173, 1367, 1558, 1582
NmeAIII	GCCGAG	6 cut(s)	426, 523, 755, 990, 1055, 1551
NotI	GCGGCCGC	2 cut(s)	410, 454
NruI	TCGCGA	1 cut(s)	539
NspI	RCATGY	1 cut(s)	1619
NspV	TTCGAA	1 cut(s)	614
PaeI	GCATGC	1 cut(s)	1619
PagI	TCATGA	1 cut(s)	1470
PauI	GCGCGC	1 cut(s)	957
PciSI	GCTCTTC	1 cut(s)	968
PcsI	WCGNNNNNNNCGW	3 cut(s)	324, 438, 572
PdiI	GCCGGC	1 cut(s)	955
PfeI	GAWTC	3 cut(s)	891, 1119, 1550
PflFI	GACNNNGTC	1 cut(s)	116
Ple19I	CGATCG	1 cut(s)	1002
PleI	GAGTC	7 cut(s)	499, 535, 943, 1013, 1067, 1295, 1315
PluTI	GGCGCC	1 cut(s)	1175
PpsI	GAGTC	7 cut(s)	499, 535, 943, 1013, 1067, 1295, 1315
PpuMI	RGGWCCY	1 cut(s)	204
PshBI	ATTAAT	1 cut(s)	630
Psp124BI	GAGCTC	3 cut(s)	195, 447, 744
Psp5II	RGGWCCY	1 cut(s)	204
Psp6I	CCWGG	3 cut(s)	725, 939, 1212
PspFI	CCCAGC	1 cut(s)	294
PspGI	CCWGG	3 cut(s)	725, 939, 1212
PspN4I	GGNNCC	9 cut(s)	205, 206, 335, 928, 1146, 1173, 1367, 1558, 1582
PspOMI	GGGCCC	1 cut(s)	333
PspPI	GGNCC	6 cut(s)	204, 210, 333, 334, 778, 1598
PspPPI	RGGWCCY	1 cut(s)	204
PsuI	RGATCY	2 cut(s)	30, 926
PsyI	GACNNNGTC	1 cut(s)	116
PteI	GCGCGC	1 cut(s)	957
PvuI	CGATCG	1 cut(s)	1002
RruI	TCGCGA	1 cut(s)	539
RsaI	GTAC	3 cut(s)	159, 1340, 1558
RsaNI	GTAC	3 cut(s)	158, 1339, 1557
SacI	GAGCTC	3 cut(s)	195, 447, 744
SacII	CCGCGG	2 cut(s)	454, 767
SalI	GTCGAC	2 cut(s)	461, 1309
SapI	GCTCTTC	1 cut(s)	968
SaqAI	TTAA	5 cut(s)	104, 227, 393, 630, 635
Sau3AI	GATC	9 cut(s)	30, 358, 785, 792, 876, 926, 999, 1218, 1467
Sau96I	GGNCC	6 cut(s)	204, 210, 333, 334, 778, 1598
SchI	GAGTC	7 cut(s)	500, 535, 944, 1014, 1067, 1295, 1316
SduI	GDGCHC	6 cut(s)	195, 337, 447, 744, 948, 1572
SfaNI	GCATC	2 cut(s)	1233, 1269
SfcI	CTRYAG	1 cut(s)	805
SfoI	GGCGCC	1 cut(s)	1173
Sfr303I	CCGCGG	2 cut(s)	454, 767
SfuI	TTCGAA	1 cut(s)	614
SgrAI	CRCCGGYG	1 cut(s)	953
SgrBI	CCGCGG	2 cut(s)	454, 767
SinI	GGWCC	1 cut(s)	204
SmaI	CCCGGG	1 cut(s)	1177
SphI	GCATGC	1 cut(s)	1619
Sse9I	AATT	8 cut(s)	173, 366, 386, 582, 610, 616, 631, 653
SspDI	GGCGCC	1 cut(s)	1171
SspMI	CTAG	1 cut(s)	971
SstI	GAGCTC	3 cut(s)	195, 447, 744
StyI	CCWWGG	1 cut(s)	975
TaaI	ACNGT	2 cut(s)	814, 1206
TaiI	ACGT	2 cut(s)	330, 915
TasI	AATT	8 cut(s)	173, 366, 386, 582, 610, 616, 631, 653
TfiI	GAWTC	3 cut(s)	891, 1119, 1550
Tru1I	TTAA	5 cut(s)	104, 227, 393, 630, 635
Tru9I	TTAA	5 cut(s)	104, 227, 393, 630, 635
TscAI	CASTG	1 cut(s)	717
TseI	GCWGC	3 cut(s)	64, 769, 1619
TspGWI	ACGGA	3 cut(s)	145, 484, 667
TspMI	CCCGGG	1 cut(s)	1175
TspRI	CASTG	1 cut(s)	717
Tth111I	GACNNNGTC	1 cut(s)	116
VpaK11BI	GGWCC	1 cut(s)	204
VspI	ATTAAT	1 cut(s)	630
XagI	CCTNNNNNAGG	1 cut(s)	341
XapI	RAATTY	2 cut(s)	173, 616
XceI	RCATGY	1 cut(s)	1619
XmaI	CCCGGG	1 cut(s)	1175
XmiI	GTMKAC	2 cut(s)	462, 1310
XspI	CTAG	1 cut(s)	971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.