MD07G1053900.v1.1

calcium calmodulin-dependent serine threonine-protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
4973222 .. 4978977
5756 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1053900.v1.1.491

Sequence Viewer

Length: 1581 bp
ATGATACAAGAAACAAGAAGACTTGCAGATGAGTATGAGATATCAGAGATTTTAGGCAGAGGAGGATTCTCTGTGGTCAGAAAAGGCATCAGCAGAAAGTCAAGCAGCAGCAGTGACAAAACCGATGTGGCAATCAAAACACTCAAAAGGCCGTTTGCACCCTCGAACCCTCCTCCTCTGCCGCCCCACGCCCGGCGGAACGACCAGAATAGCTTTGCTGCTGCCGCTTTCCAAACCCGGAAGCAGGTGTCCATATCGAATGTGCTGCTCACGAATGAAATCCTGGTGATGAGGAAGATTGTTGAGAATGTGTCGCCGCACCCGAACGTGATTGACCTCTATGATGTGTACGAGGATGAGAACGGGGTTCACCTTGTGCTGGAGCTATGTTCTGGAGGGGAACTGTTTGATAGGATTGTGAAGCAAGAAAGGTATTCTGAGGTTGGAGCTGCAGCTGTGGTGAGGCAGATTGCACAAGGCTTGGCAGCTCTTCACCGCTCGAATATTGTTCACCGGGATTTGAAGCCGGAAAACTGCCTCTTCTTGGACAACACCGTTGATTCTCCTTTGAAGATTATGGATTTTGGGCTGAGTTCTGTGGAGGAGTTCACTGACCCTGTTGTGGGACTGTTTGGTTCCATAGATTATGTGTCACCAGAGGCTCTTTCTCAGGGGCAAGTAACTTCCAAGAGCGATATGTGGGCTCTTGGTGTAATCTTATATATCCTTCTCTCCGGGTACCCACCTTTTATTGCTCAGTCGAATCGGCAAAAGCAACAGATGATTATGGCTGGAGAATTCAGTTTCTATGAGAAAACCTGGAAGGGGATTTCTTTGTCAGCAAAGCAATTGATTTCGAGCCTCCTCAAAGTCGACCCTGACAAGAGACCTAGTGCTCAAGAGCTTCTGGACCATCCATGGGTTGTCGGTCTTTCAGCCAGAGAGGATCAAATGGATGCTGAGATTGTATCACGACTGCAGAGTTTTAATGCTCGGCGCAAACTCCGTGCTGCAGCAATAGCAAGCGTGTGGACAAGCTCGATTTTCTTAAGGACAAAGAAGCTAAAATCGTTACTAGGATCCTATGACCTTAAACCAGAGGAAATCAAGAATCTGAGTTCACATTTTAAGAAAATATGTGTAAAAGGTGACAATGCTACTCTTTCTGAATTCGAGGAGGTACTGAAAGCAATGAAAATGTCGTCTCTAATGCCTCTAGCACCCCGAATCTTTGACCTATTTGACAACAATCGTGATGGCACCATTGACATGCGAGAGATACTGTGTGGGTTCTCTAATCTCAAGAACTCACAAGGAGACGATGCTCTCCGCCTGTGCTTCCAGATGTATGATACGGATCGGTCTGGATGCATCAGCAAAGAAGAAGTAGCATCTATGCTCAGGGCTTTACCAGATGACTGCCTTCCAGCTGATATCACCGAACCTGGAAAACTAGATGAAATATTTGATCGGATGGATGCAAACAGTGATGGAAAAGTTACCTTTGATGAGTTCAAAGCTGCCATGCAGAGAGATAGCTCTCTCCAAGATGTAGTCCTCTCCCATCTTCGACCAATATAG

Protein Analysis

527

Amino Acids

58.79

Weight (kDa)

5.78

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 66 - 308 3.3e-59 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 91 - 303 1.9e-30 Protein tyrosine and serine/threonine kinase
EF-hand_7 PF13499 441 - 510 4.9e-15 EF-hand domain pair
EF-hand_6 PF13405 443 - 470 6e-06 EF-hand domain
EF-hand_1 PF00036 484 - 511 2.3e-07 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017312)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g27182
malus_domestica MD07G1053900.v1.1
rosa_chinensis RchiOBHm_Chr7g0218291
rosa_laevigata RLG00000002380
rosa_multiflora Rmu_sc0002408.1_g000003 Rmu_sc0004956.1_g000013
rosa_roxburghii Rroxscaffold_3G00241090
rosa_rugosa Rorug07G0176200
rosa_samantha Rh7AG317900 Rh7BG309200 Rh7CG334700 Rh7DG316900
rosa_wichuraiana Rw7G027000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 235
Acc36I ACCTGC 1 cut(s) 235
Acc65I GGTACC 1 cut(s) 738
AccB1I GGYRCC 2 cut(s) 738, 1259
AccBSI CCGCTC 1 cut(s) 498
AccI GTMKAC 1 cut(s) 873
AciI CCGC 6 cut(s) 182, 196, 225, 317, 496, 1330
AclWI GGATC 4 cut(s) 954, 1074, 1087, 1365
AcsI RAATTY 2 cut(s) 797, 1169
AdeI CACNNNGTG 1 cut(s) 376
AfaI GTAC 3 cut(s) 350, 740, 1182
AfiI CCNNNNNNNGG 8 cut(s) 192, 244, 379, 544, 622, 623, 825, 919
AflII CTTAAG 1 cut(s) 1048
AgsI TTSAA 3 cut(s) 523, 571, 1516
AjnI CCWGG 3 cut(s) 282, 818, 1444
Alw21I GWGCWC 1 cut(s) 898
Alw26I GTCTC 3 cut(s) 880, 1209, 1311
AlwI GGATC 4 cut(s) 954, 1074, 1087, 1365
AoxI GGCC 1 cut(s) 149
ApoI RAATTY 2 cut(s) 797, 1169
Asp718I GGTACC 1 cut(s) 738
AspLEI GCGC 1 cut(s) 999
AspS9I GGNCC 1 cut(s) 910
AsuC2I CCSGG 4 cut(s) 193, 238, 515, 736
AsuHPI GGTGA 8 cut(s) 298, 362, 472, 485, 503, 645, 1160, 1429
AvaII GGWCC 1 cut(s) 910
BamHI GGATCC 1 cut(s) 1079
BanI GGYRCC 2 cut(s) 738, 1259
BanII GRGCYC 1 cut(s) 706
BbsI GAAGAC 1 cut(s) 25
Bbv12I GWGCWC 1 cut(s) 898
BccI CCATC 5 cut(s) 921, 1250, 1468, 1484, 1572
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 2 cut(s) 247, 281
BciT130I CCWGG 3 cut(s) 284, 820, 1446
BcnI CCSGG 4 cut(s) 193, 238, 515, 736
BcoDI GTCTC 3 cut(s) 880, 1209, 1311
BfaI CTAG 4 cut(s) 891, 1076, 1217, 1454
BfmI CTRYAG 3 cut(s) 450, 977, 1011
BfrI CTTAAG 1 cut(s) 1048
BfuAI ACCTGC 1 cut(s) 235
Bme1390I CCNGG 7 cut(s) 193, 238, 284, 515, 736, 820, 1446
Bme18I GGWCC 1 cut(s) 910
BmgT120I GGNCC 1 cut(s) 910
BmiI GGNNCC 4 cut(s) 637, 740, 1081, 1261
BmrFI CCNGG 7 cut(s) 193, 238, 284, 515, 736, 820, 1446
BmsI GCATC 7 cut(s) 96, 946, 1312, 1358, 1380, 1400, 1468
BpiI GAAGAC 1 cut(s) 25
BpmI CTGGAG 3 cut(s) 401, 414, 813
Bpu10I CCTNAGC 1 cut(s) 1400
BpuEI CTTGAG 2 cut(s) 882, 1286
BpuMI CCSGG 4 cut(s) 193, 238, 515, 736
BsaBI GATNNNNATC 1 cut(s) 1356
BsaI GGTCTC 1 cut(s) 880
BsaJI CCNNGG 1 cut(s) 917
Bsc4I CCNNNNNNNGG 8 cut(s) 192, 244, 379, 544, 622, 623, 825, 919
Bse3DI GCAATG 1 cut(s) 1197
Bse8I GATNNNNATC 1 cut(s) 1356
BseBI CCWGG 3 cut(s) 284, 820, 1446
BseDI CCNNGG 1 cut(s) 917
BseGI GGATG 6 cut(s) 361, 913, 961, 1373, 1479, 1483
BseJI GATNNNNATC 1 cut(s) 1356
BseLI CCNNNNNNNGG 8 cut(s) 192, 244, 379, 544, 622, 623, 825, 919
BseMI GCAATG 1 cut(s) 1197
BseMII CTCAG 7 cut(s) 429, 581, 683, 770, 951, 1106, 1414
BseRI GAGGAG 6 cut(s) 75, 162, 165, 617, 854, 1190
BshFI GGCC 1 cut(s) 151
BshNI GGYRCC 2 cut(s) 738, 1259
BsiHKAI GWGCWC 1 cut(s) 898
BsiSI CCGG 5 cut(s) 193, 238, 514, 527, 735
BslFI GGGAC 1 cut(s) 639
BslI CCNNNNNNNGG 8 cut(s) 192, 244, 379, 544, 622, 623, 825, 919
BsmAI GTCTC 3 cut(s) 880, 1209, 1311
BsmBI CGTCTC 2 cut(s) 1209, 1311
BsmFI GGGAC 1 cut(s) 639
BsnI GGCC 1 cut(s) 151
Bso31I GGTCTC 1 cut(s) 880
Bsp1286I GDGCHC 2 cut(s) 706, 898
Bsp143I GATC 4 cut(s) 946, 1079, 1357, 1468
Bsp19I CCATGG 1 cut(s) 917
BspACI CCGC 6 cut(s) 182, 196, 225, 317, 496, 1330
BspANI GGCC 1 cut(s) 151
BspCNI CTCAG 7 cut(s) 430, 582, 682, 769, 952, 1107, 1413
BspLI GGNNCC 4 cut(s) 637, 740, 1081, 1261
BspMAI CTGCAG 3 cut(s) 454, 981, 1015
BspMI ACCTGC 1 cut(s) 235
BspPI GGATC 4 cut(s) 954, 1074, 1087, 1365
BspQI GCTCTTC 1 cut(s) 495
BspT107I GGYRCC 2 cut(s) 738, 1259
BspTI CTTAAG 1 cut(s) 1048
BspTNI GGTCTC 1 cut(s) 880
BsrBI CCGCTC 1 cut(s) 498
BsrDI GCAATG 1 cut(s) 1197
BssECI CCNNGG 1 cut(s) 917
BssMI GATC 4 cut(s) 946, 1079, 1357, 1468
BssT1I CCWWGG 1 cut(s) 917
Bst2UI CCWGG 3 cut(s) 284, 820, 1446
Bst4CI ACNGT 5 cut(s) 405, 556, 630, 1284, 1487
Bst6I CTCTTC 2 cut(s) 495, 545
BstAFI CTTAAG 1 cut(s) 1048
BstC8I GCNNGC 1 cut(s) 1024
BstDEI CTNAG 7 cut(s) 438, 590, 669, 756, 960, 1115, 1400
BstDSI CCRYGG 1 cut(s) 917
BstF5I GGATG 6 cut(s) 361, 913, 961, 1373, 1479, 1483
BstHHI GCGC 1 cut(s) 999
BstKTI GATC 4 cut(s) 949, 1082, 1360, 1471
BstMAI GTCTC 3 cut(s) 880, 1209, 1311
BstMBI GATC 4 cut(s) 946, 1079, 1357, 1468
BstMWI GCNNNNNNNGC 2 cut(s) 224, 1019
BstNI CCWGG 3 cut(s) 284, 820, 1446
BstNSI RCATGY 1 cut(s) 1273
BstSCI CCNGG 7 cut(s) 191, 236, 282, 513, 734, 818, 1444
BstSFI CTRYAG 3 cut(s) 450, 977, 1011
BstV2I GAAGAC 1 cut(s) 25
BstX2I RGATCY 1 cut(s) 1079
BstYI RGATCY 1 cut(s) 1079
BsuRI GGCC 1 cut(s) 151
BtgI CCRYGG 1 cut(s) 917
BtsCI GGATG 6 cut(s) 361, 913, 961, 1373, 1479, 1483
BtsI GCAGTG 1 cut(s) 118
BtsIMutI CAGTG 3 cut(s) 118, 609, 1492
BveI ACCTGC 1 cut(s) 235
Cac8I GCNNGC 1 cut(s) 1024
CfoI GCGC 1 cut(s) 999
Cfr13I GGNCC 1 cut(s) 910
Csp6I GTAC 3 cut(s) 349, 739, 1181
CviAII CATG 3 cut(s) 918, 1270, 1525
CviQI GTAC 3 cut(s) 349, 739, 1181
DdeI CTNAG 7 cut(s) 438, 590, 669, 756, 960, 1115, 1400
DpnI GATC 4 cut(s) 948, 1081, 1359, 1470
DpnII GATC 4 cut(s) 946, 1079, 1357, 1468
DraIII CACNNNGTG 1 cut(s) 376
Eam1104I CTCTTC 2 cut(s) 495, 545
EarI CTCTTC 2 cut(s) 495, 545
EciI GGCGGA 2 cut(s) 211, 1319
Eco130I CCWWGG 1 cut(s) 917
Eco24I GRGCYC 1 cut(s) 706
Eco31I GGTCTC 1 cut(s) 880
Eco32I GATATC 2 cut(s) 42, 1435
Eco47I GGWCC 1 cut(s) 910
EcoRI GAATTC 2 cut(s) 797, 1169
EcoRII CCWGG 3 cut(s) 282, 818, 1444
EcoRV GATATC 2 cut(s) 42, 1435
EcoT14I CCWWGG 1 cut(s) 917
EcoT22I ATGCAT 1 cut(s) 1373
EcoT38I GRGCYC 1 cut(s) 706
ErhI CCWWGG 1 cut(s) 917
Esp3I CGTCTC 2 cut(s) 1209, 1311
FaeI CATG 3 cut(s) 921, 1273, 1528
FaqI GGGAC 1 cut(s) 639
FatI CATG 3 cut(s) 917, 1269, 1524
FblI GTMKAC 1 cut(s) 873
FokI GGATG 6 cut(s) 368, 900, 968, 1380, 1486, 1490
FriOI GRGCYC 1 cut(s) 706
FspBI CTAG 4 cut(s) 891, 1076, 1217, 1454
GlaI GCGC 1 cut(s) 998
GsuI CTGGAG 3 cut(s) 401, 414, 813
HaeIII GGCC 1 cut(s) 151
HapII CCGG 5 cut(s) 193, 238, 514, 527, 735
HhaI GCGC 1 cut(s) 999
Hin1II CATG 3 cut(s) 921, 1273, 1528
Hin6I GCGC 1 cut(s) 997
HinP1I GCGC 1 cut(s) 997
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HinfI GANTC 5 cut(s) 66, 560, 763, 1111, 1227
HpaII CCGG 5 cut(s) 193, 238, 514, 527, 735
HphI GGTGA 8 cut(s) 298, 362, 472, 485, 503, 645, 1160, 1429
Hpy166II GTNNAC 7 cut(s) 349, 370, 511, 609, 874, 1032, 1121
Hpy188I TCNGA 6 cut(s) 46, 80, 439, 1116, 1168, 1473
Hpy8I GTNNAC 7 cut(s) 349, 370, 511, 609, 874, 1032, 1121
HpyAV CCTTC 3 cut(s) 737, 817, 1433
HpyCH4III ACNGT 5 cut(s) 405, 556, 630, 1284, 1487
HpyCH4IV ACGT 1 cut(s) 327
HpyCH4V TGCA 9 cut(s) 26, 158, 452, 473, 979, 1013, 1371, 1481, 1528
HpyF10VI GCNNNNNNNGC 2 cut(s) 224, 1019
HpyF3I CTNAG 7 cut(s) 438, 590, 669, 756, 960, 1115, 1400
HpySE526I ACGT 1 cut(s) 327
Hsp92II CATG 3 cut(s) 921, 1273, 1528
HspAI GCGC 1 cut(s) 997
KpnI GGTACC 1 cut(s) 742
Kzo9I GATC 4 cut(s) 946, 1079, 1357, 1468
LguI GCTCTTC 1 cut(s) 495
LmnI GCTCC 2 cut(s) 382, 446
LweI GCATC 7 cut(s) 96, 946, 1312, 1358, 1380, 1400, 1468
MaeI CTAG 4 cut(s) 891, 1076, 1217, 1454
MaeII ACGT 1 cut(s) 327
MaeIII GTNAC 6 cut(s) 113, 651, 679, 1071, 1148, 1498
MalI GATC 4 cut(s) 948, 1081, 1359, 1470
MbiI CCGCTC 1 cut(s) 498
MboI GATC 4 cut(s) 946, 1079, 1357, 1468
MboII GAAGA 7 cut(s) 30, 307, 482, 532, 583, 1394, 1559
MfeI CAATTG 1 cut(s) 848
MflI RGATCY 1 cut(s) 1079
MhlI GDGCHC 2 cut(s) 706, 898
MluCI AATT 3 cut(s) 797, 848, 1169
MmeI TCCRAC 1 cut(s) 424
Mph1103I ATGCAT 1 cut(s) 1373
MseI TTAA 4 cut(s) 987, 1049, 1092, 1128
MslI CAYNNNNRTG 1 cut(s) 1268
MspA1I CMGCKG 2 cut(s) 455, 1430
MspCI CTTAAG 1 cut(s) 1048
MspI CCGG 5 cut(s) 193, 238, 514, 527, 735
MspR9I CCNGG 7 cut(s) 193, 238, 284, 515, 736, 820, 1446
MunI CAATTG 1 cut(s) 848
MvaI CCWGG 3 cut(s) 284, 820, 1446
MwoI GCNNNNNNNGC 2 cut(s) 224, 1019
NciI CCSGG 4 cut(s) 193, 238, 515, 736
NcoI CCATGG 1 cut(s) 917
NdeII GATC 4 cut(s) 946, 1079, 1357, 1468
NlaIII CATG 3 cut(s) 921, 1273, 1528
NlaIV GGNNCC 4 cut(s) 637, 740, 1081, 1261
NmeAIII GCCGAG 1 cut(s) 973
NmuCI GTSAC 3 cut(s) 113, 651, 1148
NsiI ATGCAT 1 cut(s) 1373
NspI RCATGY 1 cut(s) 1273
PaqCI CACCTGC 1 cut(s) 235
PciSI GCTCTTC 1 cut(s) 495
PcsI WCGNNNNNNNCGW 1 cut(s) 320
PfeI GAWTC 5 cut(s) 66, 560, 763, 1111, 1227
Psp6I CCWGG 3 cut(s) 282, 818, 1444
PspGI CCWGG 3 cut(s) 282, 818, 1444
PspN4I GGNNCC 4 cut(s) 637, 740, 1081, 1261
PspPI GGNCC 1 cut(s) 910
PstI CTGCAG 3 cut(s) 454, 981, 1015
PsuI RGATCY 1 cut(s) 1079
PvuII CAGCTG 2 cut(s) 455, 1430
RsaI GTAC 3 cut(s) 350, 740, 1182
RsaNI GTAC 3 cut(s) 349, 739, 1181
RseI CAYNNNNRTG 1 cut(s) 1268
SalI GTCGAC 1 cut(s) 872
SapI GCTCTTC 1 cut(s) 495
SaqAI TTAA 4 cut(s) 987, 1049, 1092, 1128
Sau3AI GATC 4 cut(s) 946, 1079, 1357, 1468
Sau96I GGNCC 1 cut(s) 910
ScrFI CCNGG 7 cut(s) 193, 238, 284, 515, 736, 820, 1446
SduI GDGCHC 2 cut(s) 706, 898
SfaNI GCATC 7 cut(s) 96, 946, 1312, 1358, 1380, 1400, 1468
SfcI CTRYAG 3 cut(s) 450, 977, 1011
SinI GGWCC 1 cut(s) 910
SmiMI CAYNNNNRTG 1 cut(s) 1268
SmlI CTYRAG 3 cut(s) 897, 1048, 1301
SmoI CTYRAG 3 cut(s) 897, 1048, 1301
Sse9I AATT 3 cut(s) 797, 848, 1169
SsiI CCGC 6 cut(s) 182, 196, 225, 317, 496, 1330
SspI AATATT 2 cut(s) 505, 1464
SspMI CTAG 4 cut(s) 891, 1076, 1217, 1454
StyD4I CCNGG 7 cut(s) 191, 236, 282, 513, 734, 818, 1444
StyI CCWWGG 1 cut(s) 917
TaaI ACNGT 5 cut(s) 405, 556, 630, 1284, 1487
TaiI ACGT 1 cut(s) 330
TaqI TCGA 9 cut(s) 164, 257, 500, 761, 857, 873, 1040, 1173, 1570
TaqII GACCGA 2 cut(s) 917, 1350
TasI AATT 3 cut(s) 797, 848, 1169
TauI GCSGC 3 cut(s) 184, 227, 319
TfiI GAWTC 5 cut(s) 66, 560, 763, 1111, 1227
Tru1I TTAA 4 cut(s) 987, 1049, 1092, 1128
Tru9I TTAA 4 cut(s) 987, 1049, 1092, 1128
TscAI CASTG 3 cut(s) 118, 616, 1492
TseFI GTSAC 3 cut(s) 113, 651, 1148
Tsp45I GTSAC 3 cut(s) 113, 651, 1148
TspDTI ATGAA 3 cut(s) 291, 1208, 1473
TspGWI ACGGA 2 cut(s) 995, 1370
TspRI CASTG 3 cut(s) 118, 616, 1492
Vha464I CTTAAG 1 cut(s) 1048
VpaK11BI GGWCC 1 cut(s) 910
XapI RAATTY 2 cut(s) 797, 1169
XceI RCATGY 1 cut(s) 1273
XmiI GTMKAC 1 cut(s) 873
XspI CTAG 4 cut(s) 891, 1076, 1217, 1454
Zsp2I ATGCAT 1 cut(s) 1373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.