Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0017312

Physical Location & Seq

Genomic Coordinates Forward (+)

33135533 .. 33138910

Gene Structure 3378 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGGACAAGAAACTAGGAGACTCGCCGATGAGTATGAGGTAGCTGAGATTTTAGGGAGAGGAGGATTCTCAGTAGTCAGGAAAGGCATCAGTAGAAAAGCAGGTACCAGTGACAAAAACAATGTTGCCATCAAAACACTCAAAAGACCATTTGGGGGCTCTTCCTCTTCCTCATCCAAAAACTCTTCATTTAATCCTGGTTTGAAGCAGGGCTTCCCAGTCCCGACTAGGAAACAAGTCTCTATATCTAATGTTTTGCTCACAAATGAAATCTTGGTCATGAGGAAGATAGTTGAGAATGTCTCGCCCCATCCGAATGTGATTGACCTCTATGATGTGTATGAGGATGAGAATGGAGTTCACCTTGTGCTGGAGCTTTGTTCCGGTGGCGAACTCTTTGATAGGATTGTGAAGCAAGAGAGGTACTCTGAGGCAGGGGCTGCAGCTGTGGTCAGGCAGATTGCACAGGGCTTAGCTGCTCTGCACAAGTCAAATATTGTTCATAGGGATTTGAAGCCTGAGAATTGTCTCTTCTTAAATAGTAGTGATGATTCTCCATTGAAGATCATGGATTTCGGGCTCAGTTCTGTTGAAGAGTTTACTGACCCTGTTGTTGGCTTGTTTGGTTCCATTGATTATGTCTCACCAGAGGCTCTTTCTCAGGGACAAATCACTTGTAAAAGTGATATGTGGGCTCTCGGTGTAATCTTGTATATCCTTCTCTCTGGGTACCCACCTTTTATTGCTCAGTCGAATCGGCAGAAGCAGCAGATGATAATGGCCGGAGAATTCAGCTTTTACGAGAAAACTTGGAAGGGAATTTCCTTATCAGCGAAGCAATTAATATCAGACCTCCTCAAAGTTGATCCTGAAAAGAGACCTAGTGCTCAAGAGCTTCTGGACCATCCATGGGTTGTAGGTCTTTCAGCCAGAGAGGATCAAATGGATTCTGAGATTGTTTCACGACTGCAGAGTTTTAATGCTCGACGCAAACTCCGTGCTGCAGCAATAGCTAGTGTGTGGACAAGCTCCATTTTCTTGAGGACAAAGAAGCTCAAATCATTGCTAGGGTCCCATGACCTTAAACAGGAGGAAATCCAGAACCTGAGTTTGCATTTTAAGAAAATATGTGTAAAGGGTGATAATGCAACTCTGTCTGAATTTGTGGAGGTGCTGAAAGCAATGAAAATGTCATCACTGGTCCCTCTAGCACCCCGTATTTTCGACCTATTTGACAACAACCGAGATGGAACAGTAGACATGCGAGAGATACTCTGTGGTTTCTCTAGTCTCAAGAATTCACGAGGAGATGATGCTCTCCGCCTGTGCTTCCAGATGTATGATACAGATCGATCAGGATGCATCAGTAAAGAAGAAGTGGCATCTATGCTCAGGGCTTTGCCAGATGACTGCCTTCCAGCTGATATTACAGAACCTGGGAAATTGGATGAAATTTTTGATCGAATGGATGCCAACAGCGACGGAAAAGTTACCTTTGATGAGTTCAAAGCGGCCATGCAGAGAGACAGCTCTCTCCAAGATGTAGTCCTCTCCTCTCTTCGGCCACTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009877 GO:0009931 GO:0009987 GO:0010857 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 ko04921 ko04925 ko05145 map04626 map04921 map04925 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 Pkinase

Protein Analysis

523

Amino Acids

58.09

Weight (kDa)

5.95

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	95 - 305	2e-58	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	96 - 300	2.7e-30	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	438 - 507	4.8e-15	EF-hand domain pair
EF-hand_6	PF13405	440 - 467	6e-06	EF-hand domain
EF-hand_1	PF00036	481 - 508	2.3e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017312)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g27182
malus_domestica	MD07G1053900.v1.1
rosa_chinensis	RchiOBHm_Chr7g0218291
rosa_laevigata	RLG00000002380
rosa_multiflora	Rmu_sc0002408.1_g000003 Rmu_sc0004956.1_g000013
rosa_roxburghii	Rroxscaffold_3G00241090
rosa_rugosa	Rorug07G0176200
rosa_samantha	Rh7AG317900 Rh7BG309200 Rh7CG334700 Rh7DG316900
rosa_wichuraiana	Rw7G027000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	92
Acc65I	GGTACC	2 cut(s)	104, 729
AccB1I	GGYRCC	2 cut(s)	104, 729
AccI	GTMKAC	1 cut(s)	1257
AciI	CCGC	2 cut(s)	1321, 1511
AclWI	GGATC	2 cut(s)	860, 945
AcoI	YGGCCR	3 cut(s)	780, 1512, 1562
AcsI	RAATTY	5 cut(s)	788, 819, 1160, 1297, 1452
AdeI	CACNNNGTG	1 cut(s)	367
AfaI	GTAC	3 cut(s)	106, 425, 731
AfiI	CCNNNNNNNGG	6 cut(s)	155, 370, 614, 910, 1087, 1560
AgsI	TTSAA	5 cut(s)	205, 514, 562, 593, 1507
AjnI	CCWGG	2 cut(s)	196, 1435
Alw21I	GWGCWC	1 cut(s)	889
Alw26I	GTCTC	8 cut(s)	13, 244, 307, 533, 646, 871, 1295, 1518
AlwI	GGATC	2 cut(s)	860, 945
AlwNI	CAGNNNCTG	3 cut(s)	440, 1105, 1436
AoxI	GGCC	3 cut(s)	780, 1512, 1562
ApeKI	GCWGC	6 cut(s)	440, 443, 476, 766, 1001, 1004
ApoI	RAATTY	5 cut(s)	788, 819, 1160, 1297, 1452
AseI	ATTAAT	1 cut(s)	842
Asp718I	GGTACC	2 cut(s)	104, 729
AspS9I	GGNCC	3 cut(s)	901, 1071, 1201
AsuHPI	GGTGA	3 cut(s)	353, 636, 1151
AvaII	GGWCC	3 cut(s)	901, 1071, 1201
BanI	GGYRCC	2 cut(s)	104, 729
BanII	GRGCYC	3 cut(s)	161, 582, 697
BauI	CACGAG	1 cut(s)	1302
Bbv12I	GWGCWC	1 cut(s)	889
BbvI	GCAGC	6 cut(s)	427, 455, 463, 778, 988, 1016
BccI	CCATC	4 cut(s)	137, 318, 912, 1241
BcgI	CGANNNNNNTGC	2 cut(s)	1341, 1375
BciT130I	CCWGG	2 cut(s)	198, 1437
BcoDI	GTCTC	8 cut(s)	13, 244, 307, 533, 646, 871, 1295, 1518
BfaI	CTAG	7 cut(s)	15, 228, 882, 1014, 1067, 1208, 1287
BfmI	CTRYAG	4 cut(s)	441, 968, 1002, 1568
BfuAI	ACCTGC	1 cut(s)	92
BisI	GCNGC	7 cut(s)	441, 444, 477, 767, 1002, 1005, 1512
BlpI	GCTNAGC	1 cut(s)	472
BlsI	GCNGC	7 cut(s)	442, 445, 478, 768, 1003, 1006, 1513
Bme1390I	CCNGG	2 cut(s)	198, 1437
Bme18I	GGWCC	3 cut(s)	901, 1071, 1201
BmgT120I	GGNCC	3 cut(s)	901, 1071, 1201
BmiI	GGNNCC	6 cut(s)	106, 628, 731, 1072, 1073, 1203
BmrFI	CCNGG	2 cut(s)	198, 1437
BmrI	ACTGGG	1 cut(s)	212
BmsI	GCATC	6 cut(s)	96, 1303, 1349, 1371, 1391, 1459
BmuI	ACTGGG	1 cut(s)	212
BplI	GAGNNNNNCTC	6 cut(s)	287, 319, 410, 442, 1257, 1289
BpmI	CTGGAG	1 cut(s)	392
Bpu10I	CCTNAGC	1 cut(s)	1391
Bpu1102I	GCTNAGC	1 cut(s)	472
BpuEI	CTTGAG	3 cut(s)	873, 1060, 1277
Bsa29I	ATCGAT	1 cut(s)	1351
BsaBI	GATNNNNATC	1 cut(s)	1347
BsaI	GGTCTC	1 cut(s)	871
BsaJI	CCNNGG	2 cut(s)	908, 1436
BsaWI	WCCGGW	1 cut(s)	383
BsaXI	ACNNNNNCTCC	2 cut(s)	978, 1008
Bsc4I	CCNNNNNNNGG	6 cut(s)	155, 370, 614, 910, 1087, 1560
Bse1I	ACTGG	3 cut(s)	108, 218, 1203
Bse3DI	GCAATG	2 cut(s)	1061, 1188
Bse8I	GATNNNNATC	1 cut(s)	1347
BseBI	CCWGG	2 cut(s)	198, 1437
BseCI	ATCGAT	1 cut(s)	1351
BseDI	CCNNGG	2 cut(s)	908, 1436
BseGI	GGATG	7 cut(s)	173, 310, 352, 904, 1364, 1453, 1474
BseJI	GATNNNNATC	1 cut(s)	1347
BseLI	CCNNNNNNNGG	6 cut(s)	155, 370, 614, 910, 1087, 1560
BseMI	GCAATG	2 cut(s)	1061, 1188
BseNI	ACTGG	3 cut(s)	108, 218, 1203
BseRI	GAGGAG	4 cut(s)	75, 845, 1320, 1543
BseXI	GCAGC	6 cut(s)	427, 455, 463, 778, 988, 1016
BsgI	GTGCAG	1 cut(s)	467
BshFI	GGCC	3 cut(s)	782, 1514, 1564
BshNI	GGYRCC	2 cut(s)	104, 729
BshVI	ATCGAT	1 cut(s)	1351
BsiHKAI	GWGCWC	1 cut(s)	889
BsiSI	CCGG	2 cut(s)	384, 783
BslFI	GGGAC	5 cut(s)	18, 206, 678, 1057, 1187
BslI	CCNNNNNNNGG	6 cut(s)	155, 370, 614, 910, 1087, 1560
BsmAI	GTCTC	8 cut(s)	13, 244, 307, 533, 646, 871, 1295, 1518
BsmFI	GGGAC	5 cut(s)	18, 206, 678, 1057, 1187
BsnI	GGCC	3 cut(s)	782, 1514, 1564
Bso31I	GGTCTC	1 cut(s)	871
Bsp1286I	GDGCHC	4 cut(s)	161, 582, 697, 889
Bsp143I	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
Bsp1720I	GCTNAGC	1 cut(s)	472
Bsp19I	CCATGG	1 cut(s)	908
BspACI	CCGC	2 cut(s)	1321, 1511
BspANI	GGCC	3 cut(s)	782, 1514, 1564
BspDI	ATCGAT	1 cut(s)	1351
BspHI	TCATGA	1 cut(s)	279
BspLI	GGNNCC	6 cut(s)	106, 628, 731, 1072, 1073, 1203
BspMAI	CTGCAG	3 cut(s)	445, 972, 1006
BspMI	ACCTGC	1 cut(s)	92
BspPI	GGATC	2 cut(s)	860, 945
BspQI	GCTCTTC	1 cut(s)	166
BspT107I	GGYRCC	2 cut(s)	104, 729
BspTNI	GGTCTC	1 cut(s)	871
BsrDI	GCAATG	2 cut(s)	1061, 1188
BsrI	ACTGG	3 cut(s)	108, 218, 1203
BssECI	CCNNGG	2 cut(s)	908, 1436
BssMI	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
BssSI	CACGAG	1 cut(s)	1302
BssT1I	CCWWGG	1 cut(s)	908
Bst2BI	CACGAG	1 cut(s)	1302
Bst2UI	CCWGG	2 cut(s)	198, 1437
Bst4CI	ACNGT	1 cut(s)	1255
Bst6I	CTCTTC	6 cut(s)	166, 172, 190, 536, 588, 1563
BstAPI	GCANNNNNTGC	1 cut(s)	440
BstDSI	CCRYGG	1 cut(s)	908
BstENI	CCTNNNNNAGG	1 cut(s)	1085
BstF5I	GGATG	7 cut(s)	173, 310, 352, 904, 1364, 1453, 1474
BstKTI	GATC	6 cut(s)	567, 868, 940, 1351, 1355, 1462
BstMAI	GTCTC	8 cut(s)	13, 244, 307, 533, 646, 871, 1295, 1518
BstMBI	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
BstMWI	GCNNNNNNNGC	3 cut(s)	440, 766, 1010
BstNI	CCWGG	2 cut(s)	198, 1437
BstNSI	RCATGY	1 cut(s)	1264
BstSCI	CCNGG	2 cut(s)	196, 1435
BstSFI	CTRYAG	4 cut(s)	441, 968, 1002, 1568
BstV1I	GCAGC	6 cut(s)	427, 455, 463, 778, 988, 1016
Bsu15I	ATCGAT	1 cut(s)	1351
BsuRI	GGCC	3 cut(s)	782, 1514, 1564
BsuTUI	ATCGAT	1 cut(s)	1351
BtgI	CCRYGG	1 cut(s)	908
BtsCI	GGATG	7 cut(s)	173, 310, 352, 904, 1364, 1453, 1474
BtsIMutI	CAGTG	2 cut(s)	115, 1196
BveI	ACCTGC	1 cut(s)	92
CaiI	CAGNNNCTG	3 cut(s)	440, 1105, 1436
CciI	TCATGA	1 cut(s)	279
Cfr13I	GGNCC	3 cut(s)	901, 1071, 1201
ClaI	ATCGAT	1 cut(s)	1351
CseI	GACGC	1 cut(s)	996
Csp6I	GTAC	3 cut(s)	105, 424, 730
CviAII	CATG	6 cut(s)	280, 568, 909, 1076, 1261, 1516
CviQI	GTAC	3 cut(s)	105, 424, 730
DpnI	GATC	6 cut(s)	566, 867, 939, 1350, 1354, 1461
DpnII	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
DraIII	CACNNNGTG	1 cut(s)	367
EaeI	YGGCCR	3 cut(s)	780, 1512, 1562
Eam1104I	CTCTTC	6 cut(s)	166, 172, 190, 536, 588, 1563
EarI	CTCTTC	6 cut(s)	166, 172, 190, 536, 588, 1563
EciI	GGCGGA	1 cut(s)	1310
Eco130I	CCWWGG	1 cut(s)	908
Eco24I	GRGCYC	3 cut(s)	161, 582, 697
Eco31I	GGTCTC	1 cut(s)	871
Eco47I	GGWCC	3 cut(s)	901, 1071, 1201
EcoNI	CCTNNNNNAGG	1 cut(s)	1085
EcoO109I	RGGNCCY	1 cut(s)	1071
EcoRI	GAATTC	2 cut(s)	788, 1297
EcoRII	CCWGG	2 cut(s)	196, 1435
EcoT14I	CCWWGG	1 cut(s)	908
EcoT22I	ATGCAT	1 cut(s)	1364
EcoT38I	GRGCYC	3 cut(s)	161, 582, 697
ErhI	CCWWGG	1 cut(s)	908
FaeI	CATG	6 cut(s)	283, 571, 912, 1079, 1264, 1519
FalI	AAGNNNNNCTT	2 cut(s)	197, 229
FaqI	GGGAC	5 cut(s)	18, 206, 678, 1057, 1187
FatI	CATG	6 cut(s)	279, 567, 908, 1075, 1260, 1515
FblI	GTMKAC	1 cut(s)	1257
Fnu4HI	GCNGC	7 cut(s)	441, 444, 477, 767, 1002, 1005, 1512
FokI	GGATG	7 cut(s)	160, 297, 359, 891, 1371, 1460, 1481
FriOI	GRGCYC	3 cut(s)	161, 582, 697
Fsp4HI	GCNGC	7 cut(s)	441, 444, 477, 767, 1002, 1005, 1512
FspBI	CTAG	7 cut(s)	15, 228, 882, 1014, 1067, 1208, 1287
GluI	GCNGC	7 cut(s)	441, 444, 477, 767, 1002, 1005, 1512
GsuI	CTGGAG	1 cut(s)	392
HaeIII	GGCC	3 cut(s)	782, 1514, 1564
HapII	CCGG	2 cut(s)	384, 783
HgaI	GACGC	1 cut(s)	996
Hin1II	CATG	6 cut(s)	283, 571, 912, 1079, 1264, 1519
HinfI	GANTC	5 cut(s)	21, 66, 551, 754, 947
HpaII	CCGG	2 cut(s)	384, 783
HphI	GGTGA	3 cut(s)	353, 636, 1151
Hpy166II	GTNNAC	4 cut(s)	361, 600, 1023, 1258
Hpy188I	TCNGA	5 cut(s)	315, 430, 850, 952, 1159
Hpy8I	GTNNAC	4 cut(s)	361, 600, 1023, 1258
Hpy99I	CGWCG	2 cut(s)	990, 1484
HpyAV	CCTTC	3 cut(s)	728, 808, 1424
HpyCH4III	ACNGT	1 cut(s)	1255
HpyCH4V	TGCA	9 cut(s)	443, 464, 484, 970, 1004, 1114, 1148, 1362, 1519
HpyF10VI	GCNNNNNNNGC	3 cut(s)	440, 766, 1010
Hsp92II	CATG	6 cut(s)	283, 571, 912, 1079, 1264, 1519
KflI	GGGWCCC	1 cut(s)	1071
KpnI	GGTACC	2 cut(s)	108, 733
Kzo9I	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
LguI	GCTCTTC	1 cut(s)	166
LmnI	GCTCC	2 cut(s)	373, 1034
Lsp1109I	GCAGC	6 cut(s)	427, 455, 463, 778, 988, 1016
LweI	GCATC	6 cut(s)	96, 1303, 1349, 1371, 1391, 1459
MaeI	CTAG	7 cut(s)	15, 228, 882, 1014, 1067, 1208, 1287
MaeIII	GTNAC	2 cut(s)	110, 1489
MalI	GATC	6 cut(s)	566, 867, 939, 1350, 1354, 1461
MboI	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
MboII	GAAGA	9 cut(s)	153, 159, 177, 298, 523, 574, 605, 1385, 1550
MhlI	GDGCHC	4 cut(s)	161, 582, 697, 889
MluCI	AATT	8 cut(s)	523, 788, 819, 839, 1160, 1297, 1442, 1452
MlyI	GAGTC	1 cut(s)	15
Mph1103I	ATGCAT	1 cut(s)	1364
MseI	TTAA	6 cut(s)	192, 536, 842, 978, 1083, 1119
MslI	CAYNNNNRTG	1 cut(s)	315
MspA1I	CMGCKG	2 cut(s)	446, 1421
MspI	CCGG	2 cut(s)	384, 783
MspR9I	CCNGG	2 cut(s)	198, 1437
MvaI	CCWGG	2 cut(s)	198, 1437
MwoI	GCNNNNNNNGC	3 cut(s)	440, 766, 1010
NcoI	CCATGG	1 cut(s)	908
NdeII	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
NlaIII	CATG	6 cut(s)	283, 571, 912, 1079, 1264, 1519
NlaIV	GGNNCC	6 cut(s)	106, 628, 731, 1072, 1073, 1203
NmuCI	GTSAC	1 cut(s)	110
NsiI	ATGCAT	1 cut(s)	1364
NspI	RCATGY	1 cut(s)	1264
PagI	TCATGA	1 cut(s)	279
PciSI	GCTCTTC	1 cut(s)	166
PcsI	WCGNNNNNNNCGW	2 cut(s)	311, 994
PfeI	GAWTC	4 cut(s)	66, 551, 754, 947
PkrI	GCNGC	7 cut(s)	442, 445, 478, 768, 1003, 1006, 1513
PleI	GAGTC	1 cut(s)	15
PpsI	GAGTC	1 cut(s)	15
PpuMI	RGGWCCY	1 cut(s)	1071
PshBI	ATTAAT	1 cut(s)	842
Psp5II	RGGWCCY	1 cut(s)	1071
Psp6I	CCWGG	2 cut(s)	196, 1435
PspGI	CCWGG	2 cut(s)	196, 1435
PspN4I	GGNNCC	6 cut(s)	106, 628, 731, 1072, 1073, 1203
PspPI	GGNCC	3 cut(s)	901, 1071, 1201
PspPPI	RGGWCCY	1 cut(s)	1071
PstI	CTGCAG	3 cut(s)	445, 972, 1006
PstNI	CAGNNNCTG	3 cut(s)	440, 1105, 1436
PvuII	CAGCTG	2 cut(s)	446, 1421
RsaI	GTAC	3 cut(s)	106, 425, 731
RsaNI	GTAC	3 cut(s)	105, 424, 730
RseI	CAYNNNNRTG	1 cut(s)	315
SapI	GCTCTTC	1 cut(s)	166
SaqAI	TTAA	6 cut(s)	192, 536, 842, 978, 1083, 1119
SatI	GCNGC	7 cut(s)	441, 444, 477, 767, 1002, 1005, 1512
Sau3AI	GATC	6 cut(s)	564, 865, 937, 1348, 1352, 1459
Sau96I	GGNCC	3 cut(s)	901, 1071, 1201
SchI	GAGTC	1 cut(s)	15
ScrFI	CCNGG	2 cut(s)	198, 1437
SduI	GDGCHC	4 cut(s)	161, 582, 697, 889
SfaNI	GCATC	6 cut(s)	96, 1303, 1349, 1371, 1391, 1459
SfcI	CTRYAG	4 cut(s)	441, 968, 1002, 1568
SinI	GGWCC	3 cut(s)	901, 1071, 1201
SmiMI	CAYNNNNRTG	1 cut(s)	315
SmlI	CTYRAG	3 cut(s)	888, 1039, 1292
SmoI	CTYRAG	3 cut(s)	888, 1039, 1292
Sse9I	AATT	8 cut(s)	523, 788, 819, 839, 1160, 1297, 1442, 1452
SsiI	CCGC	2 cut(s)	1321, 1511
SspI	AATATT	1 cut(s)	496
SspMI	CTAG	7 cut(s)	15, 228, 882, 1014, 1067, 1208, 1287
StyD4I	CCNGG	2 cut(s)	196, 1435
StyI	CCWWGG	1 cut(s)	908
TaaI	ACNGT	1 cut(s)	1255
TaqI	TCGA	5 cut(s)	752, 985, 1224, 1351, 1462
TasI	AATT	8 cut(s)	523, 788, 819, 839, 1160, 1297, 1442, 1452
TauI	GCSGC	1 cut(s)	1514
TfiI	GAWTC	4 cut(s)	66, 551, 754, 947
Tru1I	TTAA	6 cut(s)	192, 536, 842, 978, 1083, 1119
Tru9I	TTAA	6 cut(s)	192, 536, 842, 978, 1083, 1119
TscAI	CASTG	2 cut(s)	115, 1203
TseFI	GTSAC	1 cut(s)	110
TseI	GCWGC	6 cut(s)	440, 443, 476, 766, 1001, 1004
Tsp45I	GTSAC	1 cut(s)	110
TspDTI	ATGAA	5 cut(s)	177, 282, 491, 1199, 1464
TspGWI	ACGGA	2 cut(s)	986, 1497
TspRI	CASTG	2 cut(s)	115, 1203
VpaK11BI	GGWCC	3 cut(s)	901, 1071, 1201
VspI	ATTAAT	1 cut(s)	842
XagI	CCTNNNNNAGG	1 cut(s)	1085
XapI	RAATTY	5 cut(s)	788, 819, 1160, 1297, 1452
XceI	RCATGY	1 cut(s)	1264
XmiI	GTMKAC	1 cut(s)	1257
XspI	CTAG	7 cut(s)	15, 228, 882, 1014, 1067, 1208, 1287
Zsp2I	ATGCAT	1 cut(s)	1364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.