MD07G1156800.v1.1

P21-Rho-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0014369
Physical Location & Seq
Forward (+)
22779049 .. 22783231
4183 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1156800.v1.1.491

Sequence Viewer

Length: 1461 bp
ATGGCTCGGCTCTTCCGATCCAAATCTTGCGATCTCGTCGGACTCACCGAGTTCAACATTCCTCCTCCGAGTCCATTTTCCCACTACCACAACACCAGCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATATGAGGAGTTGGGTTTTGAAGACGAGCAGGAGGTTGTAGGAAATCCCATGTCTGCCCCATTTCTGTATCCCACGATTAGAGCCAGTGGGAAGAATGAAGGTCGAGACTTTCAGGGGCATAACGGTCAACAGCAGCAGGAGCAGCACCAGTTTGCCATACTCGACATTTTGGTGGCGGCTCTGAGGAAGTCTTTGATAACTTGCAGCGTGGAGAGGGATGACGTGGCATCGTCTATCGACATCAGTTCTCCGACTGAGGTGAGGCATGTCTCGCATGTCACTTTTGATAGGTTTAATGGGTTTCTGGGTTTGCCGACTGAGCTCGAGCCTGAGGTCCCCAGGAAGGCGCCAAGTGCCAGTGCAAGTGTGTTTGGGGTCTCTGCCAAGTCGATGCAGTGTTCTTTTGATAATAACGGCAACAGTGTGCCAACGATACTTCTTATGATGCAAAAGCGATTGTATTCAGGAGGAGGCCTTAAAGCGGAAGGAATATTCAGAATAACTGCTGAAAACGATCAAGAAGAGCGTCTTCGTGGCCAGTTGAACAAAGGCATCGTGCCGCATGGAATTGATGTTCATTGTTTAGCAGGCTTGATAAAGGCATGGTTTAGAGAGCTTCCTACAAGAGTACTTGATTCACTCACACCAGAACAGGTGTTGCGCTGCAACACAGAAGATGACTGCACTGAACTTGTGAAGACGCTTCCTCCAACAGAAGCTTCACTGCTTGATTGGGCTATCAATTTGATGGCCGATGTTGCACAGAATGAAGAGCACAATAAGATGAATGCACGCAACATTGCTATGGTTTTTGCACCTAACATGACCGAGATGGCAGATCCTTTGACTGCATTAATACACGCCGTGCAAGTTATGAATTTCCTCAAGACGCTGATCTTAAAGATCCTACGCGAGAGAGAGGAATCAGCTGCGGAGGCTACATTGCACTCATCATGCTCTAACCACAACAGACAAACTATGTATTCGATTATGGGTGAATCTTTTGTTCATGATAGCTCATTCATAACCGCCACTTTGGACAGTCCAAAAGCTGACATCGATGAGAAACTTTGGTGCTCTCCGGTAATGACCGATGGGGAAGATGAACTCGAATCCACTTCACACAGCAGCGCATCTACTAAATGTGTACTTGAGTGTTCAGAAAATGAATGCAGAAATGGATACGAAGCTGGAGATTGGTTAAGTTTGAGGAAAGGAGTGCGGAAGCTATGCAGCCACCCGGTGTTTCAGTTGAGTAAGCCGGCTAAGAAGACTGCGAATCTTGATATTGTAAATGCTAGGGGAGAAGGCGGAGAAGCATGGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0008150 GO:0009505 GO:0009531 GO:0009664 GO:0009987 GO:0016020 GO:0016043 GO:0030312 GO:0044464 GO:0045229 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PBD RhoGAP

Protein Analysis

487

Amino Acids

54.02

Weight (kDa)

4.94

Isoelectric Point (pI)

55.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RhoGAP PF00620 187 - 321 2e-22 RhoGAP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014369)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G46710
fragaria_vesca FvH4_7g17360
malus_domestica MD01G1086700.v1.1 MD07G1156800.v1.1
prunus_persica Prupe.2G195100_v2.0.a1
pyrus_communis pycom01g11060 pycom07g15340
rosa_chinensis RchiOBHm_Chr1g0360801
rosa_laevigata RLG00000027785
rosa_multiflora Rmu_ssc0000022.1_g000034
rosa_roxburghii Rroxscaffold_4G00295800
rosa_rugosa Rorug01G0281600
rosa_samantha Rh1AG293600 Rh1BG258200 Rh1CG276100 Rh1DG288500
rosa_wichuraiana Rw1G025980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 478
AccII CGCG 1 cut(s) 1044
AciI CCGC 7 cut(s) 308, 614, 692, 1064, 1161, 1354, 1443
AclWI GGATC 3 cut(s) 12, 965, 1030
AcoI YGGCCR 2 cut(s) 667, 882
AcsI RAATTY 1 cut(s) 1009
AcyI GRCGYC 1 cut(s) 479
AdeI CACNNNGTG 2 cut(s) 997, 1375
AfaI GTAC 2 cut(s) 762, 1281
AfiI CCNNNNNNNGG 2 cut(s) 475, 613
AgsI TTSAA 3 cut(s) 55, 152, 676
AjiI CACGTC 1 cut(s) 355
AjnI CCWGG 1 cut(s) 470
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AloI GAACNNNNNNTCC 2 cut(s) 690, 722
AluBI AGCT 8 cut(s) 454, 748, 851, 1061, 1149, 1184, 1322, 1360
AluI AGCT 8 cut(s) 454, 748, 851, 1061, 1149, 1184, 1322, 1360
Alw21I GWGCWC 3 cut(s) 456, 909, 1211
Alw26I GTCTC 3 cut(s) 231, 406, 514
AlwI GGATC 3 cut(s) 12, 965, 1030
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 3 cut(s) 604, 667, 882
ApeKI GCWGC 7 cut(s) 265, 274, 336, 795, 1061, 1260, 1365
ApoI RAATTY 1 cut(s) 1009
AseI ATTAAT 1 cut(s) 986
AspLEI GCGC 3 cut(s) 481, 795, 1265
AspS9I GGNCC 1 cut(s) 466
AsuC2I CCSGG 1 cut(s) 1373
AsuHPI GGTGA 3 cut(s) 37, 403, 1139
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 1 cut(s) 466
AxyI CCTNAGG 1 cut(s) 462
BalI TGGCCA 1 cut(s) 669
BanI GGYRCC 1 cut(s) 478
BanII GRGCYC 1 cut(s) 456
BbsI GAAGAC 4 cut(s) 159, 653, 836, 1409
Bbv12I GWGCWC 3 cut(s) 456, 909, 1211
BbvI GCAGC 7 cut(s) 277, 286, 348, 782, 1048, 1272, 1377
BccI CCATC 3 cut(s) 874, 958, 1220
BceAI ACGGC 2 cut(s) 562, 980
BciT130I CCWGG 1 cut(s) 472
BciVI GTATCC 2 cut(s) 210, 1307
BcnI CCSGG 1 cut(s) 1373
BcoDI GTCTC 3 cut(s) 231, 406, 514
BfaI CTAG 1 cut(s) 1431
BfoI RGCGCY 1 cut(s) 482
BfuI GTATCC 2 cut(s) 210, 1307
BisI GCNGC 9 cut(s) 266, 275, 309, 337, 692, 796, 1062, 1261, 1366
BlsI GCNGC 9 cut(s) 267, 276, 310, 338, 693, 797, 1063, 1262, 1367
BmcAI AGTACT 1 cut(s) 762
Bme1390I CCNGG 2 cut(s) 472, 1373
Bme18I GGWCC 1 cut(s) 466
BmeT110I CYCGRG 1 cut(s) 455
BmgBI CACGTC 1 cut(s) 355
BmgT120I GGNCC 1 cut(s) 466
BmiI GGNNCC 2 cut(s) 468, 480
BmrFI CCNGG 2 cut(s) 472, 1373
BmsI GCATC 5 cut(s) 368, 513, 567, 693, 1274
BpiI GAAGAC 4 cut(s) 159, 653, 836, 1409
BpmI CTGGAG 1 cut(s) 1344
BpuEI CTTGAG 2 cut(s) 1001, 1304
BpuMI CCSGG 1 cut(s) 1373
Bsa29I ATCGAT 1 cut(s) 1191
BsaBI GATNNNNATC 1 cut(s) 22
BsaHI GRCGYC 1 cut(s) 479
BsaI GGTCTC 1 cut(s) 514
BsaJI CCNNGG 1 cut(s) 470
BsaWI WCCGGW 1 cut(s) 1213
BsaXI ACNNNNNCTCC 2 cut(s) 823, 853
Bsc4I CCNNNNNNNGG 2 cut(s) 475, 613
Bse118I RCCGGY 1 cut(s) 1393
Bse1I ACTGG 4 cut(s) 216, 280, 489, 670
Bse21I CCTNAGG 1 cut(s) 462
Bse3DI GCAATG 2 cut(s) 930, 1073
Bse8I GATNNNNATC 1 cut(s) 22
BseBI CCWGG 1 cut(s) 472
BseCI ATCGAT 1 cut(s) 1191
BseDI CCNNGG 1 cut(s) 470
BseGI GGATG 1 cut(s) 355
BseJI GATNNNNATC 1 cut(s) 22
BseLI CCNNNNNNNGG 2 cut(s) 475, 613
BseMI GCAATG 2 cut(s) 930, 1073
BseMII CTCAG 4 cut(s) 305, 378, 441, 453
BseNI ACTGG 4 cut(s) 216, 280, 489, 670
BseRI GAGGAG 3 cut(s) 54, 152, 615
BseXI GCAGC 7 cut(s) 277, 286, 348, 782, 1048, 1272, 1377
BsgI GTGCAG 1 cut(s) 799
Bsh1236I CGCG 1 cut(s) 1044
BshFI GGCC 3 cut(s) 606, 669, 884
BshNI GGYRCC 1 cut(s) 478
BshVI ATCGAT 1 cut(s) 1191
BsiHKAI GWGCWC 3 cut(s) 456, 909, 1211
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 3 cut(s) 1214, 1373, 1394
BslFI GGGAC 1 cut(s) 452
BslI CCNNNNNNNGG 2 cut(s) 475, 613
BsmAI GTCTC 3 cut(s) 231, 406, 514
BsmFI GGGAC 1 cut(s) 452
BsmI GAATGC 2 cut(s) 925, 1307
BsnI GGCC 3 cut(s) 606, 669, 884
Bso31I GGTCTC 1 cut(s) 514
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 3 cut(s) 456, 909, 1211
Bsp143I GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
BspACI CCGC 7 cut(s) 308, 614, 692, 1064, 1161, 1354, 1443
BspANI GGCC 3 cut(s) 606, 669, 884
BspCNI CTCAG 4 cut(s) 306, 379, 442, 454
BspDI ATCGAT 1 cut(s) 1191
BspFNI CGCG 1 cut(s) 1044
BspHI TCATGA 1 cut(s) 1141
BspLI GGNNCC 2 cut(s) 468, 480
BspPI GGATC 3 cut(s) 12, 965, 1030
BspQI GCTCTTC 3 cut(s) 17, 648, 897
BspT107I GGYRCC 1 cut(s) 478
BspTNI GGTCTC 1 cut(s) 514
BsrDI GCAATG 2 cut(s) 930, 1073
BsrFI RCCGGY 1 cut(s) 1393
BsrI ACTGG 4 cut(s) 216, 280, 489, 670
BssAI RCCGGY 1 cut(s) 1393
BssECI CCNNGG 1 cut(s) 470
BssMI GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
BssNI GRCGYC 1 cut(s) 479
Bst2UI CCWGG 1 cut(s) 472
Bst4CI ACNGT 3 cut(s) 257, 554, 1175
Bst6I CTCTTC 3 cut(s) 17, 648, 897
BstACI GRCGYC 1 cut(s) 479
BstC8I GCNNGC 3 cut(s) 721, 925, 1395
BstDEI CTNAG 5 cut(s) 314, 387, 450, 462, 1398
BstF5I GGATG 1 cut(s) 355
BstFNI CGCG 1 cut(s) 1044
BstH2I RGCGCY 1 cut(s) 482
BstHHI GCGC 3 cut(s) 481, 795, 1265
BstKTI GATC 6 cut(s) 20, 34, 649, 973, 1029, 1038
BstMAI GTCTC 3 cut(s) 231, 406, 514
BstMBI GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
BstMWI GCNNNNNNNGC 7 cut(s) 271, 274, 403, 451, 485, 890, 1067
BstNI CCWGG 1 cut(s) 472
BstNSI RCATGY 2 cut(s) 401, 410
BstSCI CCNGG 2 cut(s) 470, 1371
BstUI CGCG 1 cut(s) 1044
BstV1I GCAGC 7 cut(s) 277, 286, 348, 782, 1048, 1272, 1377
BstV2I GAAGAC 4 cut(s) 159, 653, 836, 1409
BstX2I RGATCY 2 cut(s) 970, 1035
BstYI RGATCY 2 cut(s) 970, 1035
Bsu15I ATCGAT 1 cut(s) 1191
Bsu36I CCTNAGG 1 cut(s) 462
BsuI GTATCC 2 cut(s) 210, 1307
BsuRI GGCC 3 cut(s) 606, 669, 884
BsuTUI ATCGAT 1 cut(s) 1191
BtrI CACGTC 1 cut(s) 355
BtsCI GGATG 1 cut(s) 355
BtsI GCAGTG 2 cut(s) 533, 854
BtsIMutI CAGTG 6 cut(s) 223, 496, 533, 559, 816, 854
Cac8I GCNNGC 3 cut(s) 721, 925, 1395
CciI TCATGA 1 cut(s) 1141
CfoI GCGC 3 cut(s) 481, 795, 1265
Cfr10I RCCGGY 1 cut(s) 1393
Cfr13I GGNCC 1 cut(s) 466
ClaI ATCGAT 1 cut(s) 1191
CseI GACGC 3 cut(s) 647, 841, 1030
Csp6I GTAC 2 cut(s) 761, 1280
CviAII CATG 9 cut(s) 181, 398, 407, 695, 735, 955, 1086, 1142, 1452
CviQI GTAC 2 cut(s) 761, 1280
DdeI CTNAG 5 cut(s) 314, 387, 450, 462, 1398
DinI GGCGCC 1 cut(s) 480
DpnI GATC 6 cut(s) 19, 33, 648, 972, 1028, 1037
DpnII GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
DraIII CACNNNGTG 2 cut(s) 997, 1375
EaeI YGGCCR 2 cut(s) 667, 882
Eam1104I CTCTTC 3 cut(s) 17, 648, 897
EarI CTCTTC 3 cut(s) 17, 648, 897
EciI GGCGGA 1 cut(s) 1458
Ecl136II GAGCTC 1 cut(s) 454
Eco147I AGGCCT 1 cut(s) 606
Eco24I GRGCYC 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 514
Eco47I GGWCC 1 cut(s) 466
Eco53kI GAGCTC 1 cut(s) 454
Eco81I CCTNAGG 1 cut(s) 462
Eco88I CYCGRG 1 cut(s) 455
EcoICRI GAGCTC 1 cut(s) 454
EcoO109I RGGNCCY 1 cut(s) 466
EcoRII CCWGG 1 cut(s) 470
EcoT38I GRGCYC 1 cut(s) 456
EgeI GGCGCC 1 cut(s) 480
EheI GGCGCC 1 cut(s) 480
FaeI CATG 9 cut(s) 184, 401, 410, 698, 738, 958, 1089, 1145, 1455
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FaqI GGGAC 1 cut(s) 452
FatI CATG 9 cut(s) 180, 397, 406, 694, 734, 954, 1085, 1141, 1451
Fnu4HI GCNGC 9 cut(s) 266, 275, 309, 337, 692, 796, 1062, 1261, 1366
FokI GGATG 1 cut(s) 362
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 9 cut(s) 266, 275, 309, 337, 692, 796, 1062, 1261, 1366
FspBI CTAG 1 cut(s) 1431
GlaI GCGC 3 cut(s) 480, 794, 1264
GluI GCNGC 9 cut(s) 266, 275, 309, 337, 692, 796, 1062, 1261, 1366
GsuI CTGGAG 1 cut(s) 1344
HaeII RGCGCY 1 cut(s) 482
HaeIII GGCC 3 cut(s) 606, 669, 884
HapII CCGG 3 cut(s) 1214, 1373, 1394
HgaI GACGC 3 cut(s) 647, 841, 1030
HhaI GCGC 3 cut(s) 481, 795, 1265
Hin1I GRCGYC 1 cut(s) 479
Hin1II CATG 9 cut(s) 184, 401, 410, 698, 738, 958, 1089, 1145, 1455
Hin6I GCGC 3 cut(s) 479, 793, 1263
HinP1I GCGC 3 cut(s) 479, 793, 1263
HincII GTYRAC 1 cut(s) 260
HindII GTYRAC 1 cut(s) 260
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 7 cut(s) 42, 70, 767, 1055, 1130, 1244, 1411
HpaII CCGG 3 cut(s) 1214, 1373, 1394
HphI GGTGA 3 cut(s) 37, 403, 1139
Hpy166II GTNNAC 2 cut(s) 260, 1280
Hpy188I TCNGA 7 cut(s) 17, 41, 69, 315, 384, 629, 1294
Hpy188III TCNNGA 6 cut(s) 236, 597, 650, 1018, 1142, 1415
Hpy8I GTNNAC 2 cut(s) 260, 1280
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 4 cut(s) 224, 469, 611, 1433
HpyCH4III ACNGT 3 cut(s) 257, 554, 1175
HpyCH4IV ACGT 1 cut(s) 354
HpyF10VI GCNNNNNNNGC 7 cut(s) 271, 274, 403, 451, 485, 890, 1067
HpyF3I CTNAG 5 cut(s) 314, 387, 450, 462, 1398
HpySE526I ACGT 1 cut(s) 354
Hsp92I GRCGYC 1 cut(s) 479
Hsp92II CATG 9 cut(s) 184, 401, 410, 698, 738, 958, 1089, 1145, 1455
HspAI GCGC 3 cut(s) 479, 793, 1263
KasI GGCGCC 1 cut(s) 478
KroI GCCGGC 1 cut(s) 1393
KroNI GCCGGC 1 cut(s) 1395
Kzo9I GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
LguI GCTCTTC 3 cut(s) 17, 648, 897
LmnI GCTCC 1 cut(s) 271
Lsp1109I GCAGC 7 cut(s) 277, 286, 348, 782, 1048, 1272, 1377
LweI GCATC 5 cut(s) 368, 513, 567, 693, 1274
MaeI CTAG 1 cut(s) 1431
MaeII ACGT 1 cut(s) 354
MaeIII GTNAC 1 cut(s) 409
MalI GATC 6 cut(s) 19, 33, 648, 972, 1028, 1037
MboI GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
MflI RGATCY 2 cut(s) 970, 1035
MhlI GDGCHC 3 cut(s) 456, 909, 1211
MlsI TGGCCA 1 cut(s) 669
MluCI AATT 3 cut(s) 699, 874, 1009
MluNI TGGCCA 1 cut(s) 669
Mly113I GGCGCC 1 cut(s) 479
MlyI GAGTC 2 cut(s) 36, 79
MmeI TCCRAC 3 cut(s) 19, 407, 866
Mox20I TGGCCA 1 cut(s) 669
MroNI GCCGGC 1 cut(s) 1393
MscI TGGCCA 1 cut(s) 669
MseI TTAA 5 cut(s) 426, 609, 986, 1031, 1334
MslI CAYNNNNRTG 2 cut(s) 302, 935
Msp20I TGGCCA 1 cut(s) 669
MspA1I CMGCKG 1 cut(s) 1061
MspI CCGG 3 cut(s) 1214, 1373, 1394
MspR9I CCNGG 2 cut(s) 472, 1373
Mva1269I GAATGC 2 cut(s) 925, 1307
MvaI CCWGG 1 cut(s) 472
MvnI CGCG 1 cut(s) 1044
MwoI GCNNNNNNNGC 7 cut(s) 271, 274, 403, 451, 485, 890, 1067
NaeI GCCGGC 1 cut(s) 1395
NarI GGCGCC 1 cut(s) 479
NciI CCSGG 1 cut(s) 1373
NdeII GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
NgoMIV GCCGGC 1 cut(s) 1393
NlaIII CATG 9 cut(s) 184, 401, 410, 698, 738, 958, 1089, 1145, 1455
NlaIV GGNNCC 2 cut(s) 468, 480
NmuCI GTSAC 1 cut(s) 409
NspI RCATGY 2 cut(s) 401, 410
PaeR7I CTCGAG 1 cut(s) 455
PagI TCATGA 1 cut(s) 1141
PceI AGGCCT 1 cut(s) 606
PciSI GCTCTTC 3 cut(s) 17, 648, 897
PcsI WCGNNNNNNNCGW 2 cut(s) 13, 45
PctI GAATGC 2 cut(s) 925, 1307
PdiI GCCGGC 1 cut(s) 1395
PfeI GAWTC 5 cut(s) 767, 1055, 1130, 1244, 1411
PkrI GCNGC 9 cut(s) 267, 276, 310, 338, 693, 797, 1063, 1262, 1367
PleI GAGTC 2 cut(s) 36, 78
PluTI GGCGCC 1 cut(s) 482
PpsI GAGTC 2 cut(s) 36, 78
PpuMI RGGWCCY 1 cut(s) 466
PshBI ATTAAT 1 cut(s) 986
Psp124BI GAGCTC 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 466
Psp6I CCWGG 1 cut(s) 470
PspGI CCWGG 1 cut(s) 470
PspN4I GGNNCC 2 cut(s) 468, 480
PspPI GGNCC 1 cut(s) 466
PspPPI RGGWCCY 1 cut(s) 466
PspXI VCTCGAGB 1 cut(s) 455
PsuI RGATCY 2 cut(s) 970, 1035
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 2 cut(s) 762, 1281
RsaNI GTAC 2 cut(s) 761, 1280
RseI CAYNNNNRTG 2 cut(s) 302, 935
SacI GAGCTC 1 cut(s) 456
SapI GCTCTTC 3 cut(s) 17, 648, 897
SaqAI TTAA 5 cut(s) 426, 609, 986, 1031, 1334
SatI GCNGC 9 cut(s) 266, 275, 309, 337, 692, 796, 1062, 1261, 1366
Sau3AI GATC 6 cut(s) 17, 31, 646, 970, 1026, 1035
Sau96I GGNCC 1 cut(s) 466
ScaI AGTACT 1 cut(s) 762
SchI GAGTC 2 cut(s) 36, 79
ScrFI CCNGG 2 cut(s) 472, 1373
SduI GDGCHC 3 cut(s) 456, 909, 1211
SfaNI GCATC 5 cut(s) 368, 513, 567, 693, 1274
SfoI GGCGCC 1 cut(s) 480
Sfr274I CTCGAG 1 cut(s) 455
SinI GGWCC 1 cut(s) 466
SlaI CTCGAG 1 cut(s) 455
SmiMI CAYNNNNRTG 2 cut(s) 302, 935
SmlI CTYRAG 3 cut(s) 455, 1016, 1283
SmoI CTYRAG 3 cut(s) 455, 1016, 1283
Sse9I AATT 3 cut(s) 699, 874, 1009
SseBI AGGCCT 1 cut(s) 606
SsiI CCGC 7 cut(s) 308, 614, 692, 1064, 1161, 1354, 1443
SspDI GGCGCC 1 cut(s) 478
SspI AATATT 1 cut(s) 624
SspMI CTAG 1 cut(s) 1431
SstI GAGCTC 1 cut(s) 456
StuI AGGCCT 1 cut(s) 606
StyD4I CCNGG 2 cut(s) 470, 1371
TaaI ACNGT 3 cut(s) 257, 554, 1175
TaiI ACGT 1 cut(s) 357
TaqI TCGA 8 cut(s) 235, 294, 369, 456, 521, 1118, 1191, 1242
TaqII GACCGA 2 cut(s) 974, 1238
TasI AATT 3 cut(s) 699, 874, 1009
TatI WGTACW 2 cut(s) 760, 1279
TauI GCSGC 2 cut(s) 311, 694
TfiI GAWTC 5 cut(s) 767, 1055, 1130, 1244, 1411
Tru1I TTAA 5 cut(s) 426, 609, 986, 1031, 1334
Tru9I TTAA 5 cut(s) 426, 609, 986, 1031, 1334
TscAI CASTG 6 cut(s) 223, 496, 533, 559, 823, 861
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 7 cut(s) 265, 274, 336, 795, 1061, 1260, 1365
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 9 cut(s) 243, 698, 915, 932, 1022, 1130, 1144, 1251, 1314
TspRI CASTG 6 cut(s) 223, 496, 533, 559, 823, 861
VpaK11BI GGWCC 1 cut(s) 466
VspI ATTAAT 1 cut(s) 986
XapI RAATTY 1 cut(s) 1009
XceI RCATGY 2 cut(s) 401, 410
XhoI CTCGAG 1 cut(s) 455
XspI CTAG 1 cut(s) 1431
ZrmI AGTACT 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.